Citrus Sinensis ID: 024971
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 260 | 2.2.26 [Sep-21-2011] | |||||||
| O05235 | 273 | Uncharacterized hydrolase | yes | no | 0.711 | 0.677 | 0.257 | 1e-09 | |
| B1KM44 | 256 | Pimelyl-[acyl-carrier pro | yes | no | 0.757 | 0.769 | 0.245 | 4e-06 | |
| B4RF90 | 301 | Haloalkane dehalogenase O | yes | no | 0.315 | 0.272 | 0.310 | 5e-06 | |
| B0SY51 | 302 | Haloalkane dehalogenase O | yes | no | 0.307 | 0.264 | 0.329 | 9e-06 | |
| P19076 | 283 | 2-hydroxymuconate semiald | N/A | no | 0.296 | 0.272 | 0.313 | 2e-05 | |
| Q9A919 | 302 | Haloalkane dehalogenase O | yes | no | 0.307 | 0.264 | 0.359 | 2e-05 | |
| B8H3S9 | 302 | Haloalkane dehalogenase O | yes | no | 0.307 | 0.264 | 0.359 | 2e-05 | |
| Q8R164 | 291 | Valacyclovir hydrolase OS | no | no | 0.573 | 0.512 | 0.269 | 0.0002 | |
| O07015 | 269 | Sigma factor SigB regulat | no | no | 0.307 | 0.297 | 0.265 | 0.0005 | |
| Q6IE26 | 359 | Epoxide hydrolase 4 OS=Mu | no | no | 0.703 | 0.509 | 0.232 | 0.0007 |
| >sp|O05235|YUGF_BACSU Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168) GN=yugF PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+L + + ++DL +G S+K R F YT++ A + + + QA + +S
Sbjct: 49 LLRDKYDIIALDLPPFGQSEKS--RTFI----YTYQNLAKLVIGILEHLQVKQAVLVGHS 102
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG--KL 119
+GG + L AA+ +PE+ ++LL S Y L RS ++ T L
Sbjct: 103 MGGQISLSAALQKPELFSKVVLLCSS----------GY---LKRSHPTIIFGTHIPYFHL 149
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEE 179
+ K + E V L +D S + EE+++ +P + FI + G L E
Sbjct: 150 YIKRWLSKEGVMKNLLNVVHDKSLIDEEMIDGYGRPFQDEQIFKAMTRFIRHREGDLEPE 209
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGR 205
L ++ P L+ WG++D P+E+G+
Sbjct: 210 QLKKMNKPALLIWGEEDRIVPMEIGK 235
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Bacillus subtilis (strain 168) (taxid: 224308) EC: 3EC: .EC: 1EC: .EC: -EC: .EC: - |
| >sp|B1KM44|BIOH_SHEWM Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 31/228 (13%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIG 63
+RV+ +DL G+G+SD P D L+D+ ++ + A +I S+G
Sbjct: 39 YRVHYVDLPGFGHSD---PID-------------GDLDDWVDAIINQLPNTAIWIGWSLG 82
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRP--LIRSFQNLLRNTAAGKLFY 121
GLV +AA+ PE RG++ + S + + + W G P ++ F L+ GK
Sbjct: 83 GLVATKAALRYPEQVRGLVTIASSPCFMAREDESWPGIPPQVLSQFSTQLQQN-IGKTIE 141
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ +A D Q+ E ++ + L LE I L
Sbjct: 142 RFLAIQVMGS---ATAKEDIKQLKELVLSRPLPKNSALAQGLKMLENIDLRAQ------L 192
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
PQ++ P L WG D P + N + ++LP H P +S
Sbjct: 193 PQIEQPWLRVWGRLDGLVPRRVPPLMPNHQAHFTDLLLPKASHAPFLS 240
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The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Shewanella woodyi (strain ATCC 51908 / MS32) (taxid: 392500) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|B4RF90|DHMA_PHEZH Haloalkane dehalogenase OS=Phenylobacterium zucineum (strain HLK1) GN=dhmA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
++A HR + DL+G+G SDKP D+ YT+ + ++ + + V A+ C
Sbjct: 69 LVAAGHRAIAPDLVGFGRSDKPA-----DRGDYTYARHVAWMSAWLEAVDLRGAYLFCQD 123
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISL 88
GGL+GL+ PE G+++ N L
Sbjct: 124 WGGLIGLRLVAAYPERFAGVVVSNTGL 150
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Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Phenylobacterium zucineum (strain HLK1) (taxid: 450851) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|B0SY51|DHMA_CAUSK Haloalkane dehalogenase OS=Caulobacter sp. (strain K31) GN=dhmA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
A+ HRV + DLIG+G SDKP R YT+E + ++ + + + C G
Sbjct: 71 ARGHRVIAPDLIGFGRSDKPAARG-----DYTYERHVAWMSAWLEGLDLRGLTLFCQDWG 125
Query: 64 GLVGLQAAVMEPEICRGMILLNISL 88
GL+GL+ PE G+++ N L
Sbjct: 126 GLIGLRLVAAFPERFAGLVIANTGL 150
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Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Caulobacter sp. (strain K31) (taxid: 366602) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|P19076|DMPD_PSEUF 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas sp. (strain CF600) GN=dmpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LAKS RV + D++G+GYS++P Y + W + +QA + NS
Sbjct: 55 LAKSRRVIAPDMLGFGYSERPADAQ------YNRDVWVDHAVGVLDALEIEQADLVGNSF 108
Query: 63 GGLVGLQAAVMEPEICRGMILLN 85
GG + L A+ PE R ++L+
Sbjct: 109 GGGIALALAIRHPERVRRLVLMG 131
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Catalyzes the conversion of 2-hydroxymuconate semialdehyde to 2-hydroxypent-2,4-dienoate. Pseudomonas sp. (strain CF600) (taxid: 79676) EC: 3 EC: . EC: 7 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q9A919|DHMA_CAUCR Haloalkane dehalogenase OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=dhmA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPR-DF-FDKPFYTFETWASQLNDFCKDVVKDQAFFIC 59
++AK HRV + DL+G+G SDKP R D+ +++ W Q ND KD+V C
Sbjct: 69 LVAKGHRVVAPDLVGFGRSDKPAKRTDYTYERHVAWMSAWLEQ-NDL-KDIV-----LFC 121
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISL 88
GGL+GL+ PE +++ N L
Sbjct: 122 QDWGGLIGLRLVAAFPERFSAVVVSNTGL 150
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Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Caulobacter crescentus (strain ATCC 19089 / CB15) (taxid: 190650) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|B8H3S9|DHMA_CAUCN Haloalkane dehalogenase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=dhmA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPR-DF-FDKPFYTFETWASQLNDFCKDVVKDQAFFIC 59
++AK HRV + DL+G+G SDKP R D+ +++ W Q ND KD+V C
Sbjct: 69 LVAKGHRVVAPDLVGFGRSDKPAKRTDYTYERHVAWMSAWLEQ-NDL-KDIV-----LFC 121
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISL 88
GGL+GL+ PE +++ N L
Sbjct: 122 QDWGGLIGLRLVAAFPERFSAVVVSNTGL 150
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Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Caulobacter crescentus (strain NA1000 / CB15N) (taxid: 565050) EC: 3 EC: . EC: 8 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q8R164|BPHL_MOUSE Valacyclovir hydrolase OS=Mus musculus GN=Bphl PE=2 SV=1 | Back alignment and function description |
|---|
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 72/193 (37%), Gaps = 44/193 (22%)
Query: 13 DLIGYGYSDKPN---PRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQ 69
D GYGYS P+ PRDFF++ A D K + Q + S GG+ L
Sbjct: 95 DPRGYGYSRPPDRDFPRDFFERD-------AKDAVDLMKALQFKQVSLLGWSDGGITALI 147
Query: 70 AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSES 129
AA P R M++ + + + + G IR SE
Sbjct: 148 AAAKYPSYIRKMVIWGANAYVTEEDSRIYQG---IRDVSKW----------------SEK 188
Query: 130 VRNIL--CQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCP 187
R L Y+ ++ E+ V+ I Q F G + LLP V+CP
Sbjct: 189 ARKPLEALYGYDYLAKTCEDWVDGISQ-------------FKQLPEGNICRHLLPLVQCP 235
Query: 188 VLIAWGDKDPWEP 200
LI G+KDP P
Sbjct: 236 TLIVHGEKDPLVP 248
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Serine hydrolase that catalyzes the hydrolytic activation of amino acid ester prodrugs of nucleoside analogs such as valacyclovir and valganciclovir. Activates valacyclovir to acyclovir. May play a role in detoxification processes. It is a specific alpha-amino acid ester hydrolase that prefers small, hydrophobic, and aromatic side chains and does not have a stringent requirement for the leaving group other than preferring a primary alcohol. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|O07015|RSBQ_BACSU Sigma factor SigB regulation protein RsbQ OS=Bacillus subtilis (strain 168) GN=rsbQ PE=1 SV=1 | Back alignment and function description |
|---|
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGG 64
+ HRV D +G G+SD R + + T + +A + D C+ + + F+ +S+G
Sbjct: 43 EDHRVILFDYVGSGHSDL---RAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGA 99
Query: 65 LVGLQAAVMEPEICRGMILLNIS 87
L+G+ A++ PE+ ++++ S
Sbjct: 100 LIGMLASIRRPELFSHLVMVGPS 122
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Positive regulator required for energy stress activation of the sigma-B transcription factor. Could be required for rsbP phosphatase activity. Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|Q6IE26|EPHX4_MOUSE Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
+RV ++DL GYG SD P ++ Y + + + D + + I + GG++
Sbjct: 118 YRVVALDLRGYGESDAPAHQE-----SYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMI 172
Query: 67 GLQAAVMEPEICRGMILLNI---SLRMLHIKKQP----------WYGRPLIRSFQNLLRN 113
AV PE+ +I++N S+ +I + P ++ P F + +
Sbjct: 173 AWLIAVCYPEMIMKLIVINFPHPSVFTEYILRHPAQLFRSSFYYFFQIPRFPEFMFSIND 232
Query: 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSG 173
A K + TS+S I + T++ E V QPG +G + + +S
Sbjct: 233 FKALKHLF----TSQST-GIGRKGRQLTTEDLEAYVYVFSQPGALSGPINHYRNI--FSC 285
Query: 174 GPLPEELLPQVKCPVLIAWGDKDPWEPIELG 204
PL + V P L+ WG++D + +E+
Sbjct: 286 LPLKHHM---VTTPTLLLWGEEDAFMEVEMA 313
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Mus musculus (taxid: 10090) EC: 3 EC: . EC: 3 EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 260 | ||||||
| 297746468 | 375 | unnamed protein product [Vitis vinifera] | 0.869 | 0.602 | 0.871 | 1e-115 | |
| 225435747 | 365 | PREDICTED: dihydrolipoyllysine-residue a | 0.869 | 0.619 | 0.871 | 1e-115 | |
| 224073158 | 404 | predicted protein [Populus trichocarpa] | 0.869 | 0.559 | 0.845 | 1e-113 | |
| 357488653 | 351 | Haloalkane dehalogenase [Medicago trunca | 0.865 | 0.641 | 0.826 | 1e-110 | |
| 147838658 | 368 | hypothetical protein VITISV_022866 [Viti | 0.842 | 0.595 | 0.845 | 1e-109 | |
| 449514931 | 258 | PREDICTED: LOW QUALITY PROTEIN: haloalka | 0.865 | 0.872 | 0.823 | 1e-109 | |
| 449463857 | 373 | PREDICTED: epoxide hydrolase 4-like [Cuc | 0.865 | 0.603 | 0.818 | 1e-109 | |
| 356567443 | 344 | PREDICTED: dihydrolipoyllysine-residue a | 0.869 | 0.656 | 0.814 | 1e-109 | |
| 255647050 | 318 | unknown [Glycine max] | 0.869 | 0.710 | 0.814 | 1e-108 | |
| 26450541 | 370 | unknown protein [Arabidopsis thaliana] g | 0.869 | 0.610 | 0.800 | 1e-108 |
| >gi|297746468|emb|CBI16524.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/226 (87%), Positives = 213/226 (94%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLAKSHRVYSIDLIGYGYSDKPNPR+F FYTFETWA+QLNDFC DVVKD+AFFICNS
Sbjct: 123 VLAKSHRVYSIDLIGYGYSDKPNPRNFGADYFYTFETWATQLNDFCTDVVKDEAFFICNS 182
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAVMEP+IC+G++LLNISLRMLHIKKQPWYG+P+IRSFQNLLRNTA G+ FY
Sbjct: 183 IGGLVGLQAAVMEPQICKGIMLLNISLRMLHIKKQPWYGKPVIRSFQNLLRNTAMGRFFY 242
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ VAT ESV++ILCQCY+DTSQVTEELV+KIL PGLE GA DVFLEFICYSGGPLPEELL
Sbjct: 243 RSVATPESVKSILCQCYHDTSQVTEELVQKILLPGLEPGAVDVFLEFICYSGGPLPEELL 302
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
PQVKCPVLIAWGDKDPWEPIELGRAYG FDSVEDFIVLP+VGHCPQ
Sbjct: 303 PQVKCPVLIAWGDKDPWEPIELGRAYGKFDSVEDFIVLPDVGHCPQ 348
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225435747|ref|XP_002283601.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/226 (87%), Positives = 213/226 (94%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLAKSHRVYSIDLIGYGYSDKPNPR+F FYTFETWA+QLNDFC DVVKD+AFFICNS
Sbjct: 113 VLAKSHRVYSIDLIGYGYSDKPNPRNFGADYFYTFETWATQLNDFCTDVVKDEAFFICNS 172
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAVMEP+IC+G++LLNISLRMLHIKKQPWYG+P+IRSFQNLLRNTA G+ FY
Sbjct: 173 IGGLVGLQAAVMEPQICKGIMLLNISLRMLHIKKQPWYGKPVIRSFQNLLRNTAMGRFFY 232
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ VAT ESV++ILCQCY+DTSQVTEELV+KIL PGLE GA DVFLEFICYSGGPLPEELL
Sbjct: 233 RSVATPESVKSILCQCYHDTSQVTEELVQKILLPGLEPGAVDVFLEFICYSGGPLPEELL 292
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
PQVKCPVLIAWGDKDPWEPIELGRAYG FDSVEDFIVLP+VGHCPQ
Sbjct: 293 PQVKCPVLIAWGDKDPWEPIELGRAYGKFDSVEDFIVLPDVGHCPQ 338
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224073158|ref|XP_002304000.1| predicted protein [Populus trichocarpa] gi|222841432|gb|EEE78979.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/226 (84%), Positives = 213/226 (94%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLAKSHRVYSIDLIGYGYSDKPNPR+F DK FYTFETWA+QLNDFC DVVKD+AFFICNS
Sbjct: 150 VLAKSHRVYSIDLIGYGYSDKPNPREFGDKSFYTFETWATQLNDFCVDVVKDEAFFICNS 209
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGG+VGLQAAV++ +IC+G++LLNISLR+LHIKKQPW+GRP IRSFQ+LLRNTA GK F+
Sbjct: 210 IGGVVGLQAAVIDSQICKGIMLLNISLRLLHIKKQPWFGRPFIRSFQSLLRNTALGKSFF 269
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K+VA+SESVR+ILCQCY+DTSQVTEELV+KIL PGLE GAADVFLEFICYSGGPLPEELL
Sbjct: 270 KLVASSESVRSILCQCYHDTSQVTEELVQKILLPGLEPGAADVFLEFICYSGGPLPEELL 329
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
PQVKCPVLI WGDKDPWEPIELGR + NFD+VEDF+ LPNVGHCPQ
Sbjct: 330 PQVKCPVLIVWGDKDPWEPIELGRGFINFDTVEDFVTLPNVGHCPQ 375
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357488653|ref|XP_003614614.1| Haloalkane dehalogenase [Medicago truncatula] gi|355515949|gb|AES97572.1| Haloalkane dehalogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/225 (82%), Positives = 205/225 (91%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LAKSHRVYSIDLIGYGYSDKPNPR D FYTF+TWA+QLN+FC DVVKD+AFFICNSI
Sbjct: 98 LAKSHRVYSIDLIGYGYSDKPNPRQIGDDSFYTFDTWAAQLNEFCLDVVKDEAFFICNSI 157
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG+VGLQAA+ EP+IC+G++LLNISLRMLHIKKQPW+ RP I SFQ LLR+T+ GK F+K
Sbjct: 158 GGVVGLQAAITEPQICKGILLLNISLRMLHIKKQPWFARPFISSFQRLLRDTSVGKFFFK 217
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
VAT ESV+NILCQCY+DTSQVT+ELV+ IL PGLE GA DVFLEFICYSGGPLPEELLP
Sbjct: 218 AVATKESVKNILCQCYHDTSQVTDELVQLILSPGLEPGAVDVFLEFICYSGGPLPEELLP 277
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
QVKCPVLIAWGDKDPWEPIE+GR YGNFDSVEDFIVLPNVGHCPQ
Sbjct: 278 QVKCPVLIAWGDKDPWEPIEMGRNYGNFDSVEDFIVLPNVGHCPQ 322
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147838658|emb|CAN65051.1| hypothetical protein VITISV_022866 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/226 (84%), Positives = 206/226 (91%), Gaps = 7/226 (3%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLAKSHRVYSIDLIGYGYSDKPNPR+F FYTFETWA+QLNDFC DVVKD+AFFICNS
Sbjct: 123 VLAKSHRVYSIDLIGYGYSDKPNPRNFGADYFYTFETWATQLNDFCTDVVKDEAFFICNS 182
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAVMEP+IC+G++LLNISLRMLHIKKQPWYG+P+IRSFQNLLRNTA G+ FY
Sbjct: 183 IGGLVGLQAAVMEPQICKGIMLLNISLRMLHIKKQPWYGKPVIRSFQNLLRNTAMGRFFY 242
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ VAT ESV++ILC QVTEELV+KIL PGLE GA DVFLEFICYSGGPLPEELL
Sbjct: 243 RSVATPESVKSILC-------QVTEELVQKILLPGLEPGAVDVFLEFICYSGGPLPEELL 295
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
PQVKCPVLIAWGDKDPWEPIELGRAYG FDSVEDFIVLP+VGHCPQ
Sbjct: 296 PQVKCPVLIAWGDKDPWEPIELGRAYGKFDSVEDFIVLPDVGHCPQ 341
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449514931|ref|XP_004164518.1| PREDICTED: LOW QUALITY PROTEIN: haloalkane dehalogenase-like, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 210/226 (92%), Gaps = 1/226 (0%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLA+SHRVY+IDLIGYGYSDKPNP D + FYTFETWASQLNDFC DVV+D AFFICNS
Sbjct: 9 VLAQSHRVYAIDLIGYGYSDKPNP-DLVGEGFYTFETWASQLNDFCVDVVQDNAFFICNS 67
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGG+VGLQAA+M+P+IC+G++LLNISLRMLHIKKQPWYG+P IRSFQNLLRNTA GKLF+
Sbjct: 68 IGGVVGLQAAIMKPQICKGIVLLNISLRMLHIKKQPWYGKPFIRSFQNLLRNTALGKLFF 127
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ VAT ESV+NILCQCY+DTSQVT+ELV+ IL PGL+ GAAD+FLEFICYSGGPLPEELL
Sbjct: 128 RAVATPESVKNILCQCYHDTSQVTDELVQIILNPGLQPGAADIFLEFICYSGGPLPEELL 187
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
P+VKCPVLIAWGDKDPWEPIELGR Y +FDSVE+F+VLPNVGHCPQ
Sbjct: 188 PRVKCPVLIAWGDKDPWEPIELGRNYASFDSVEEFVVLPNVGHCPQ 233
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449463857|ref|XP_004149647.1| PREDICTED: epoxide hydrolase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/226 (81%), Positives = 209/226 (92%), Gaps = 1/226 (0%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLA+SHRVY+IDLIGYGYSDKPNP D + FYTFETWASQLNDFC DVV+D AFFICNS
Sbjct: 124 VLAQSHRVYAIDLIGYGYSDKPNP-DLVGEGFYTFETWASQLNDFCVDVVQDNAFFICNS 182
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGG+VGLQAA+M+P+IC+G++LLNISLRMLHIKKQPWYG+P IRSFQNLLRNTA GK F+
Sbjct: 183 IGGVVGLQAAIMKPQICKGIVLLNISLRMLHIKKQPWYGKPFIRSFQNLLRNTALGKYFF 242
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ VAT ESV+NILCQCY+DTSQVT+ELV+ IL PGL+ GAAD+FLEFICYSGGPLPEELL
Sbjct: 243 RAVATPESVKNILCQCYHDTSQVTDELVQIILNPGLQPGAADIFLEFICYSGGPLPEELL 302
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
P+VKCPVLIAWGDKDPWEPIELGR Y +FDSVE+F+VLPNVGHCPQ
Sbjct: 303 PRVKCPVLIAWGDKDPWEPIELGRNYASFDSVEEFVVLPNVGHCPQ 348
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567443|ref|XP_003551929.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/226 (81%), Positives = 205/226 (90%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLA+SHRVYSIDLIGYGYSDKPNPR D FYTFETWA+QLN+FC DV+KD+AFFICNS
Sbjct: 91 VLAQSHRVYSIDLIGYGYSDKPNPRQIGDHSFYTFETWATQLNEFCLDVIKDEAFFICNS 150
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGG+VGLQAAV+ P IC+G+ILLNISLRMLHIKKQPWYG+P IRS Q LLR+T GK F+
Sbjct: 151 IGGVVGLQAAVLAPHICQGIILLNISLRMLHIKKQPWYGKPFIRSLQRLLRDTDVGKFFF 210
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K +AT ESVRNILCQCY+DTS+VT+ELV+ IL PGLE GAA+VFLEFICYSGGPLPEELL
Sbjct: 211 KTIATKESVRNILCQCYHDTSKVTDELVQIILGPGLEPGAAEVFLEFICYSGGPLPEELL 270
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
PQVKCP+LIAWGDKDPWEPI++GR Y NFDSVEDFIVLPNVGHCPQ
Sbjct: 271 PQVKCPILIAWGDKDPWEPIDIGRNYENFDSVEDFIVLPNVGHCPQ 316
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255647050|gb|ACU23993.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/226 (81%), Positives = 205/226 (90%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLA+SHRVYSIDLIGYGYSDKPNPR D FYTFETWA+QLN+FC DV+KD+AFFICNS
Sbjct: 91 VLAQSHRVYSIDLIGYGYSDKPNPRQIGDHSFYTFETWATQLNEFCLDVIKDEAFFICNS 150
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGG+VGLQAAV+ P IC+G+ILLNISLRMLHIKKQPWYG+P IRS Q LLR+T GK F+
Sbjct: 151 IGGVVGLQAAVLAPHICQGIILLNISLRMLHIKKQPWYGKPFIRSLQRLLRDTDVGKFFF 210
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K +AT ESVRNILCQCY+DTS+VT+ELV+ IL PGLE GAA+VFLEFICYSGGPLPEELL
Sbjct: 211 KTIATKESVRNILCQCYHDTSKVTDELVQIILGPGLEPGAAEVFLEFICYSGGPLPEELL 270
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
PQVKCP+LIAWGDKDPWEPI++GR Y NFDSVEDFIVLPNVGHCPQ
Sbjct: 271 PQVKCPILIAWGDKDPWEPIDIGRNYENFDSVEDFIVLPNVGHCPQ 316
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|26450541|dbj|BAC42383.1| unknown protein [Arabidopsis thaliana] gi|28950929|gb|AAO63388.1| At5g19850 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/226 (80%), Positives = 206/226 (91%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+L K+HRVYSIDLIGYGYSDKPNPR+F +PFYTFETW QLNDFC DVVKD+AFFICNS
Sbjct: 116 ILGKTHRVYSIDLIGYGYSDKPNPREFGGEPFYTFETWGEQLNDFCLDVVKDEAFFICNS 175
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAV +PEICRG++L+NISLRMLHIKKQP+ GRP I+SFQNLLRNT GKLF+
Sbjct: 176 IGGLVGLQAAVSKPEICRGLMLINISLRMLHIKKQPFIGRPFIKSFQNLLRNTPVGKLFF 235
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K +A E+V++ILCQCY+D+SQVT+ELVE IL+PGLE GA DVFLEFICYSGGPLPE+LL
Sbjct: 236 KSIAKPETVKSILCQCYHDSSQVTDELVETILRPGLEPGAVDVFLEFICYSGGPLPEDLL 295
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
P VKCPVLIAWG+KDPWEPIELGRAY NFD+VEDF+VLP+ GHCPQ
Sbjct: 296 PLVKCPVLIAWGEKDPWEPIELGRAYSNFDAVEDFVVLPDAGHCPQ 341
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 260 | ||||||
| TAIR|locus:2832896 | 359 | AT5G19850 [Arabidopsis thalian | 0.869 | 0.629 | 0.800 | 1.6e-102 | |
| TAIR|locus:2159823 | 374 | AT5G38520 [Arabidopsis thalian | 0.842 | 0.585 | 0.331 | 1.9e-26 | |
| TAIR|locus:2115440 | 378 | AT4G36530 [Arabidopsis thalian | 0.892 | 0.613 | 0.298 | 6.8e-24 | |
| TAIR|locus:2159033 | 484 | PPH "AT5G13800" [Arabidopsis t | 0.773 | 0.415 | 0.247 | 2.5e-11 | |
| TIGR_CMR|CPS_2154 | 308 | CPS_2154 "hydrolase, alpha/bet | 0.688 | 0.581 | 0.280 | 1.1e-06 | |
| TAIR|locus:2135843 | 393 | AT4G12830 [Arabidopsis thalian | 0.792 | 0.524 | 0.245 | 1.8e-06 | |
| ZFIN|ZDB-GENE-080227-1 | 370 | ephx4 "epoxide hydrolase 4" [D | 0.719 | 0.505 | 0.258 | 2.7e-06 | |
| TAIR|locus:2122654 | 692 | AT4G25290 [Arabidopsis thalian | 0.8 | 0.300 | 0.256 | 9.5e-06 | |
| UNIPROTKB|Q48IM0 | 282 | catD3 "3-oxoadipate enol-lacto | 0.292 | 0.269 | 0.313 | 7.2e-05 | |
| UNIPROTKB|Q81LN7 | 287 | BA_4577 "Hydrolase, alpha/beta | 0.288 | 0.261 | 0.333 | 7.3e-05 |
| TAIR|locus:2832896 AT5G19850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 181/226 (80%), Positives = 206/226 (91%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+L K+HRVYSIDLIGYGYSDKPNPR+F +PFYTFETW QLNDFC DVVKD+AFFICNS
Sbjct: 116 ILGKTHRVYSIDLIGYGYSDKPNPREFGGEPFYTFETWGEQLNDFCLDVVKDEAFFICNS 175
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
IGGLVGLQAAV +PEICRG++L+NISLRMLHIKKQP+ GRP I+SFQNLLRNT GKLF+
Sbjct: 176 IGGLVGLQAAVSKPEICRGLMLINISLRMLHIKKQPFIGRPFIKSFQNLLRNTPVGKLFF 235
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K +A E+V++ILCQCY+D+SQVT+ELVE IL+PGLE GA DVFLEFICYSGGPLPE+LL
Sbjct: 236 KSIAKPETVKSILCQCYHDSSQVTDELVEAILRPGLEPGAVDVFLEFICYSGGPLPEDLL 295
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
P VKCPVLIAWG+KDPWEPIELGRAY NFD+VEDF+VLP+ GHCPQ
Sbjct: 296 PLVKCPVLIAWGEKDPWEPIELGRAYSNFDAVEDFVVLPDAGHCPQ 341
|
|
| TAIR|locus:2159823 AT5G38520 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 82/247 (33%), Positives = 128/247 (51%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+K+H VY+IDL+G+G SDKP P F YT E+WA + +F ++VV+ I NS+
Sbjct: 113 LSKNHTVYAIDLLGFGASDKP-PG--FS---YTMESWAELILNFLEEVVQKPTILIGNSV 166
Query: 63 GGLVGLQAA-------VMEP------EICRGMILLNISLRMLHIKK-QPWYGR---PLIR 105
G L + AA +E ++ +G++LLN + M + W + PL+
Sbjct: 167 GSLACVIAASGTKFLIYLEKKTESRGDLVKGLVLLNCAGGMNNKAVFDDWRIKLLMPLLL 226
Query: 106 SFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVF 165
LL+ + V E+++NIL Y + V + LVE I P GA D F
Sbjct: 227 LIDFLLKQRGIASALFNRVKDRENLKNILTNVYGNKDNVDDTLVEIIAGPANTEGALDAF 286
Query: 166 LEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNF-DSVEDF--IVLP 220
+ + GP P +L+P++ PVL+ WGD+D P++ +G+ + + D + +F VL
Sbjct: 287 VSILTGPPGPNPIKLIPEITKPVLVLWGDQDGLTPLDGPVGKYFTSLPDQLPNFNLYVLQ 346
Query: 221 NVGHCPQ 227
VGHCPQ
Sbjct: 347 GVGHCPQ 353
|
|
| TAIR|locus:2115440 AT4G36530 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 75/251 (29%), Positives = 121/251 (48%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LAK ++VY++DL+G+G+SDK + Y W Q+ DF K+VVK+ A + NS+
Sbjct: 122 LAKKYKVYALDLLGFGWSDKA----LIE---YDAMVWTDQVIDFMKEVVKEPAVVVGNSL 174
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRML-HIKKQPWYGRPLIRSF-----QNLLRNTAA 116
GG L AV PE G+ LLN + + +K+ +I F + + +
Sbjct: 175 GGFTALSVAVGLPEQVTGVALLNSAGQFAAESRKREEADETVITKFIVKPLKEIFQRVVL 234
Query: 117 GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLE----FICYS 172
G LF++ S + ++L Y D++ V + LVE I +P + A +V+ F+
Sbjct: 235 GFLFWQAKQPSR-IESVLKSVYIDSTNVDDYLVESISKPATDPNAGEVYYRLMTRFLTNQ 293
Query: 173 GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYL 232
+ +L ++ CP+L+ WGD DPW F S + L GHCP +
Sbjct: 294 SRYTLDSVLSKMTCPLLLVWGDLDPWVGPAKAEKIKAFYSNSSLVHL-QAGHCPHDEVPE 352
Query: 233 SLSSACLHTLS 243
+++ A L LS
Sbjct: 353 AVNKALLDWLS 363
|
|
| TAIR|locus:2159033 PPH "AT5G13800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 176 (67.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 56/226 (24%), Positives = 102/226 (45%)
Query: 17 YGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76
+G+ DK P + D+ ++ + W Q+ F ++V+ + + NS+GG V L A P
Sbjct: 179 WGFGDKTEP--WADQLVFSLDLWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPH 236
Query: 77 ICRGMILLNIS---------LRMLHIKKQ-PWYGR-PLIRSFQNLLRNTAAGKLFYKMVA 125
+ +G+ LLN + +R + + PW G PL + + +L ++ ++
Sbjct: 237 LVKGVTLLNATPFWGFFPNPVRSPKLARLFPWPGAFPLPERVKKIT------ELVWQKIS 290
Query: 126 TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP-EELLPQV 184
ES+ IL Q Y D S +++ +I++ AA F + GG L E L +
Sbjct: 291 DPESIAEILKQVYTDHSINVDKVFSRIVEVTQHPAAAASFASIMLAPGGELSFSEALSRC 350
Query: 185 K---CPVLIAWGDKDPW-EPIELGRAYGNFDSVEDFIVLPNVGHCP 226
K + + +G +DPW P+ + + + + P GHCP
Sbjct: 351 KENNVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISP-AGHCP 395
|
|
| TIGR_CMR|CPS_2154 CPS_2154 "hydrolase, alpha/beta hydrolase fold family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 135 (52.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/207 (28%), Positives = 93/207 (44%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNS 61
L+KSH+ D IG G SDKP+ D +D YT L + + VK+ + +
Sbjct: 63 LSKSHQCIVPDHIGCGLSDKPDD-DGYD---YTLANRIDDLEALLEHLDVKENITLVVHD 118
Query: 62 IGGLVGLQAAVMEPEICRGMILLNI-SLRMLHIKKQP---WYGR------PLIRSFQNLL 111
GG++G+ A PE + +++LN + + KK P W GR L+R F
Sbjct: 119 WGGMIGMGYAARHPERIKRLVILNTGAFHLPKAKKLPPALWLGRNTFVGAALVRGFNAF- 177
Query: 112 RNTAAGKLFYKMVATSESVRNILCQCYND-TSQV-TEELVEKILQPGLETGAADVFLEFI 169
++ A + K S+ VR +N T+++ T ++ I P L+ G D + +
Sbjct: 178 -SSVASYIGVKRKPMSKEVREAYVAPFNSWTNRISTLRFIQDI--P-LKIG--DRNYQLV 231
Query: 170 CYSGGPLPEELLPQVKCPVLIAWGDKD 196
+ + L K P+LI WG KD
Sbjct: 232 ----SDISDNLAQFKKIPMLICWGLKD 254
|
|
| TAIR|locus:2135843 AT4G12830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 135 (52.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 57/232 (24%), Positives = 96/232 (41%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VL+K++R + D +G+G+SDKP F+ YT + + S L F +V + +
Sbjct: 155 VLSKNYRAIAFDWLGFGFSDKPQAGYGFN---YTMDEFVSSLESFIDEVTTSKVSLVVQG 211
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
++ A P+ + +ILLN L H K P + F N L G++F
Sbjct: 212 YFSAAVVKYARNRPDKIKNLILLNPPLTPEHAKL-P----STLSVFSNFL----LGEIFS 262
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGP----LP 177
+ + C Y + + +V + +P L +G++ L I S
Sbjct: 263 QDPLRASDKPLTSCGPYK--MKEDDAMVYR--RPYLTSGSSGFALNAISRSMKKELKKYA 318
Query: 178 EELLPQV-----KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGH 224
EE+ + K P+ + WG +D W E + S + + LPN GH
Sbjct: 319 EEMRTSLMDKNWKIPITVCWGQRDRWLSYEGVEEFCK-SSGHNLVELPNAGH 369
|
|
| ZFIN|ZDB-GENE-080227-1 ephx4 "epoxide hydrolase 4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 133 (51.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVG 67
RV ++D+ GYG SD P+ + Y + + + D + + ++ F + + GG++
Sbjct: 125 RVVAVDMRGYGESDLPSSTES-----YRLDYLVTDIKDIVEYLGYNRCFLVGHDWGGIIA 179
Query: 68 LQAAVMEPEICRGMILLN---------ISLRM-LHIKKQPWYGRPLIRSFQNLLRNTAAG 117
A+ PE+ +I+LN +LR + K +Y + F L+ +
Sbjct: 180 WLCAIHYPEMVTKLIVLNSPHPCVFTDYALRHPSQMLKSSYYFFFQLPYFPELMLSINDF 239
Query: 118 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP 177
K K + TS S I C+ T++ E + + QPG TGA + F +S PL
Sbjct: 240 KAL-KSLFTSRST-GISCKGRWLTTEDLEAYLYALSQPGALTGALNYFRNV--FSVLPLS 295
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRA 206
+VK PVL+ WG++D + ++ A
Sbjct: 296 HS---EVKSPVLLLWGERDAFLEQDMAEA 321
|
|
| TAIR|locus:2122654 AT4G25290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 132 (51.5 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 59/230 (25%), Positives = 102/230 (44%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
++ +RV++I ++G+G S+KPN YT WA L DF +VV + A + NS
Sbjct: 439 IVNSKNRVWTITVLGFGKSEKPNI-------IYTELLWAELLRDFMAEVVGEPAHCVGNS 491
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGR-PLIRSFQNLLRNTAAGKLF 120
IGG A + P + + ++L+N + ++ P Y P+ R + +L
Sbjct: 492 IGGYFVALMAFLWPALVKSVVLVNSAGNVV-----PGYSPLPISRERRVPFGAQFGSRLL 546
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEE-LVEKILQPGLETGAADVFLEFICYSGGPLP-E 178
+ + V+ +L CY + ++ LV ++L+ + G V LE I LP
Sbjct: 547 LFFLQLN--VKKLLKDCYPVKPERADDFLVTEMLRASRDPGVVMV-LESIFGFDLSLPLN 603
Query: 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNV--GHCP 226
LL + L+ G +DP + + + +V+ V GHCP
Sbjct: 604 YLLKGFEEKTLVIQGMEDPISDPQ--KKVALLKELCPAMVIKKVKAGHCP 651
|
|
| UNIPROTKB|Q48IM0 catD3 "3-oxoadipate enol-lactonase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 98 (39.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA +++V + D++G+G S +P+P P Y A QL + + + QA + S+
Sbjct: 44 LATNYQVIAYDMLGHGASPRPDPDTGL--PGY-----AEQLRELLEHLQLPQATVVGFSM 96
Query: 63 GGLVGLQAAVMEPEICRGMILLN 85
GGLV A+ P++ G+++LN
Sbjct: 97 GGLVARAFALEFPQLLAGLVILN 119
|
|
| UNIPROTKB|Q81LN7 BA_4577 "Hydrolase, alpha/beta fold family" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 105 (42.0 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LAK H + S+D +G+G S KP DF+ Y+F T A+ K + D + +S+
Sbjct: 80 LAKDHTIISVDALGFGRSSKP--MDFY----YSFPTHANLYYKLMKKLGYDSFAILGHSM 133
Query: 63 GGLVGLQAAVMEPEICRGMIL 83
GG + L + PE +IL
Sbjct: 134 GGEISLNLTYLYPEAVTHLIL 154
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.1.2.37 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 260 | |||
| PLN02824 | 294 | PLN02824, PLN02824, hydrolase, alpha/beta fold fam | 1e-167 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 1e-43 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 3e-35 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 7e-22 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 5e-15 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 1e-14 | |
| PLN03084 | 383 | PLN03084, PLN03084, alpha/beta hydrolase fold prot | 4e-09 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 7e-07 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 1e-05 | |
| PRK00870 | 302 | PRK00870, PRK00870, haloalkane dehalogenase; Provi | 5e-05 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 2e-04 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-04 | |
| TIGR01250 | 289 | TIGR01250, pro_imino_pep_2, proline-specific pepti | 0.002 |
| >gnl|CDD|178419 PLN02824, PLN02824, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 464 bits (1196), Expect = e-167
Identities = 174/226 (76%), Positives = 194/226 (85%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLAKSHRVY+IDL+GYGYSDKPNPR FYTFETW QLNDFC DVV D AF ICNS
Sbjct: 51 VLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNS 110
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG+VGLQAAV PE+ RG++L+NISLR LHIKKQPW GRP I++FQNLLR TA GK F+
Sbjct: 111 VGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFF 170
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
K VAT E+V+NILCQCY+D S VT+ELVE IL+PGLE GA DVFL+FI YSGGPLPEELL
Sbjct: 171 KSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELL 230
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
P VKCPVLIAWG+KDPWEP+ELGRAY NFD+VEDFIVLP VGHCPQ
Sbjct: 231 PAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQ 276
|
Length = 294 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 1e-43
Identities = 86/243 (35%), Positives = 129/243 (53%), Gaps = 28/243 (11%)
Query: 1 MVLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPF-YTFETWASQLNDFCKDVVKDQAFFIC 59
VLAK++ VY+IDL+G+G SDKP F YT ETWA + DF ++VV+ I
Sbjct: 109 GVLAKNYTVYAIDLLGFGASDKP-------PGFSYTMETWAELILDFLEEVVQKPTVLIG 161
Query: 60 NSIGGLVGLQAAV-MEPEICRGMILLNISLRM--------LHIKKQPWYGRPLIRSFQNL 110
NS+G L + AA ++ RG++LLN + M IK PL+ L
Sbjct: 162 NSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIK----LLLPLLWLIDFL 217
Query: 111 LRNTA-AGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI 169
L+ A LF + V ++++NIL Y + V +ELVE I P + GA D F+ +
Sbjct: 218 LKQRGIASALFNR-VKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIV 276
Query: 170 CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFI---VLPNVGH 224
GP P +L+P++ P+L+ WGD+DP+ P++ +G+ + + S + VL VGH
Sbjct: 277 TGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGH 336
Query: 225 CPQ 227
CP
Sbjct: 337 CPH 339
|
Length = 360 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 3e-35
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 22/237 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LAK ++VY++DL+G+G+SDK + Y W Q+ DF K+VVK+ A + NS+
Sbjct: 109 LAKKYKVYALDLLGFGWSDKA----LIE---YDAMVWRDQVADFVKEVVKEPAVLVGNSL 161
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQP---------WYGRPLIRSFQNLLRN 113
GG L AV PE+ G+ LLN + + ++ R +++ + +
Sbjct: 162 GGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQR 221
Query: 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL----EFI 169
G LF++ S + ++L Y D S V + LVE I +P + A +V+ F+
Sbjct: 222 VVLGFLFWQAKQPSR-IESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFL 280
Query: 170 CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226
+ LL ++ CP+L+ WGD DPW F + L GHCP
Sbjct: 281 FNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCP 336
|
Length = 354 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 91.6 bits (226), Expect = 7e-22
Identities = 43/230 (18%), Positives = 74/230 (32%), Gaps = 11/230 (4%)
Query: 1 MVLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICN 60
LA +RV + DL G+G SD Y+ +A L + ++ + +
Sbjct: 45 PALAARYRVIAPDLRGHGRSDPA---------GYSLSAYADDLAALLDALGLEKVVLVGH 95
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
S+GG V L A+ P+ RG++L+ + ++
Sbjct: 96 SMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAA 155
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYS-GGPLPEE 179
+ + + + L AA L +
Sbjct: 156 FAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRA 215
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE-DFIVLPNVGHCPQV 228
L ++ P LI G+ DP P EL R + +V+P GH P +
Sbjct: 216 ALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHL 265
|
Length = 282 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 5e-15
Identities = 50/229 (21%), Positives = 81/229 (35%), Gaps = 24/229 (10%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
V + DL G+G S P +DF D Y F+ A L + D+ + +S+GGL+
Sbjct: 1 FDVIAFDLRGFGRSSPP--KDFAD---YRFDDLAEDLEALLDALGLDKVNLVGHSMGGLI 55
Query: 67 GLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVAT 126
L A P+ + ++L+ P R + LL N ++ +
Sbjct: 56 ALAYAAKYPDRVKALVLVGTVH--PAGLSSPLTPRGNL--LGLLLDNFFN-----RLYDS 106
Query: 127 SESVRNILC---QCYNDTSQVTEELVEKILQPG--LETGAADVFLEFIC--YSGGPLPEE 179
E++ Q ++ ET A D L +
Sbjct: 107 VEALLGRAIKQFQALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRS-A 165
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGHCPQ 227
L + P LI WGD DP P + F + + +V+ + GH Q
Sbjct: 166 ALKDIDVPTLIIWGDDDPLVPPDASEKLAALFPNAQ-LVVIDDAGHLAQ 213
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 1e-14
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA +RV + DL G+G SD P Y+ E A+ L + + +S+
Sbjct: 21 LAAGYRVLAPDLPGHGDSDGPPR------TPYSLEDDAADLAALLDALGLGPVVLVGHSL 74
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLH 92
GG V L AA PE G++L++ LR L
Sbjct: 75 GGAVALAAAARRPERVAGLVLISPPLRDLE 104
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|178633 PLN03084, PLN03084, alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 4e-09
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 52/248 (20%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VL+K++ + D +G+G+SDKP P F+ YT + + S L ++ D+ +
Sbjct: 149 VLSKNYHAIAFDWLGFGFSDKPQPGYGFN---YTLDEYVSSLESLIDELKSDKVSLVVQG 205
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
++ A P+ + +ILLN L H K P + F N L G++F
Sbjct: 206 YFSPPVVKYASAHPDKIKKLILLNPPLTKEH-AKLP----STLSEFSNFL----LGEIFS 256
Query: 122 K--MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEE 179
+ + A+ +++ + C Y + E+ +P L +G++ L I S + +E
Sbjct: 257 QDPLRASDKALTS--CGPY----AMKEDDAMVYRRPYLTSGSSGFALNAISRS---MKKE 307
Query: 180 LLPQV------------KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF--------IVL 219
L + K P+ + WG +D W N+D VEDF I L
Sbjct: 308 LKKYIEEMRSILTDKNWKTPITVCWGLRDRWL---------NYDGVEDFCKSSQHKLIEL 358
Query: 220 PNVGHCPQ 227
P GH Q
Sbjct: 359 PMAGHHVQ 366
|
Length = 383 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 7e-07
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 174 GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
E L ++ PVL+ G+ DP P E R + +VLP GH P +
Sbjct: 124 DADLREALARLTVPVLVIHGEDDPLVPPEAARRLAEALPGAELVVLPGAGHLPHLE 179
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 39/233 (16%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA V ++DL G+G S K + + A+ + F + ++A + +S+
Sbjct: 154 LAAGRPVIALDLPGHGASSKAVGAG-------SLDELAAAVLAFLDALGIERAHLVGHSM 206
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG V L+ A P+ + L I+ L G + + + A
Sbjct: 207 GGAVALRLAARAPQRVASLTL--IAPAGL--------GPEINGDY---IDGFVAA----- 248
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKIL-QPGLETGAADVFLEFI---CYSGGPLPE 178
+ ++ +L + D + VT ++VE +L L+ D L + ++GG
Sbjct: 249 --ESRRELKPVLELLFADPALVTRQMVEDLLKYKRLD--GVDDALRALADALFAGGRQRV 304
Query: 179 ELLPQV---KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
+L ++ PVL+ WG++D P + + +V VLP GH PQ+
Sbjct: 305 DLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLPDGVAVH---VLPGAGHMPQM 354
|
Length = 371 |
| >gnl|CDD|179147 PRK00870, PRK00870, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
A HRV + DLIG+G SDKP R+ D YT+ + + + + +C G
Sbjct: 71 AAGHRVIAPDLIGFGRSDKPTRRE--D---YTYARHVEWMRSWFEQLDLTDVTLVCQDWG 125
Query: 64 GLVGLQAAVMEPEICRGMILLNISL 88
GL+GL+ A P+ +++ N L
Sbjct: 126 GLIGLRLAAEHPDRFARLVVANTGL 150
|
Length = 302 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L RV D G+G SD P Y+ E A + + ++A F S+
Sbjct: 36 LTPDFRVLRYDKRGHGLSDAPEGP-------YSIEDLADDVLALLDHLGIERAVFCGLSL 88
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGR 101
GGL+ A P+ R ++L N + ++ + W R
Sbjct: 89 GGLIAQGLAARRPDRVRALVLSNTAAKI--GTPESWNAR 125
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 2e-04
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 168 FICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNFDSVEDFIVLPNVGHC 225
+ P + L ++ PVLI G +D P E A + +V+ GH
Sbjct: 87 VLAAGDPPDALDDLAKLTVPVLIIHGTRDGVVPPEEAEALAAALPGPAELVVIEGAGHS 145
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|188121 TIGR01250, pro_imino_pep_2, proline-specific peptidase, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.002
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVG 67
V D +G GYSD+P D D+ +T + + +L + + + D+ + + +S GG++
Sbjct: 55 EVIMYDQLGCGYSDQP---DDSDEELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLA 111
Query: 68 LQAAVMEPEICRGMILLN 85
+ A+ + +G+I+ +
Sbjct: 112 QEYALKYGQHLKGLIISS 129
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase. Length = 289 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 260 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.98 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.98 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.97 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.97 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.97 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.97 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.97 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.97 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.97 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.96 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.96 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.96 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.96 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.96 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.96 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.96 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.95 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.95 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.95 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.95 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.95 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.94 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.94 | |
| PLN02511 | 388 | hydrolase | 99.94 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.94 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.94 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.93 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.93 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.92 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.91 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.91 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.9 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.9 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.89 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.88 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.88 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.85 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.84 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.84 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.83 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.82 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.82 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.81 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.8 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.8 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.79 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.79 | |
| PRK10566 | 249 | esterase; Provisional | 99.78 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.74 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.73 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.73 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.71 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.7 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.68 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.67 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.66 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.66 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.65 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.64 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.61 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.59 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.58 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.57 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.56 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.52 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.5 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.5 | |
| PLN00021 | 313 | chlorophyllase | 99.49 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.46 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.43 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.42 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.42 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.41 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.41 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.41 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.39 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.36 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.33 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.32 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.31 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.3 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.29 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.26 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.26 | |
| PRK10115 | 686 | protease 2; Provisional | 99.24 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.23 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.23 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.21 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.2 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.19 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.19 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 99.19 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.17 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.16 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.15 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 99.11 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 99.06 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.05 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.04 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.0 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.0 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 99.0 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.96 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 98.96 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.9 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.8 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.79 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.79 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.78 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.75 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.72 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.69 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.69 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.67 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 98.62 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.6 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.55 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.55 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.51 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.5 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.49 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.48 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.45 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.43 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.38 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.37 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.35 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.32 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.32 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.3 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.3 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.24 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.15 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.14 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.09 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 98.07 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.04 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 98.02 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.01 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.89 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.86 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.84 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.82 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.78 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 97.78 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 97.77 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 97.76 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.72 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 97.69 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 97.62 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 97.58 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.54 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 97.48 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 97.46 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.43 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.41 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.38 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.37 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.29 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 97.29 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.27 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.24 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.23 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.17 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 97.15 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 97.14 | |
| PLN02162 | 475 | triacylglycerol lipase | 97.14 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.13 | |
| PLN00413 | 479 | triacylglycerol lipase | 97.04 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 97.02 | |
| PLN02571 | 413 | triacylglycerol lipase | 97.0 | |
| PLN02454 | 414 | triacylglycerol lipase | 97.0 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 96.95 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 96.94 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 96.92 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 96.84 | |
| PLN02408 | 365 | phospholipase A1 | 96.8 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.76 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 96.75 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.72 | |
| PLN02934 | 515 | triacylglycerol lipase | 96.61 | |
| PLN02324 | 415 | triacylglycerol lipase | 96.51 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.49 | |
| PLN02310 | 405 | triacylglycerol lipase | 96.39 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 96.37 | |
| PLN02802 | 509 | triacylglycerol lipase | 96.37 | |
| PLN02753 | 531 | triacylglycerol lipase | 96.28 | |
| PLN02209 | 437 | serine carboxypeptidase | 96.21 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 96.2 | |
| PLN02761 | 527 | lipase class 3 family protein | 96.15 | |
| PLN02719 | 518 | triacylglycerol lipase | 96.12 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 95.9 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 95.82 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 95.79 | |
| PLN02847 | 633 | triacylglycerol lipase | 95.49 | |
| PLN02209 | 437 | serine carboxypeptidase | 95.46 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 95.4 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 95.33 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 95.25 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 95.17 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 95.17 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 94.99 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 94.84 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 94.47 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 94.32 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 94.27 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 94.07 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 93.75 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 93.07 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 92.99 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 92.99 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 92.84 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 92.15 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 91.93 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 91.69 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 91.66 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 91.36 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 90.92 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 89.71 | |
| PF00698 | 318 | Acyl_transf_1: Acyl transferase domain; InterPro: | 87.86 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 87.14 | |
| smart00827 | 298 | PKS_AT Acyl transferase domain in polyketide synth | 86.58 | |
| TIGR03131 | 295 | malonate_mdcH malonate decarboxylase, epsilon subu | 85.95 | |
| PRK10279 | 300 | hypothetical protein; Provisional | 85.75 | |
| TIGR00128 | 290 | fabD malonyl CoA-acyl carrier protein transacylase | 83.51 | |
| cd07225 | 306 | Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai | 83.26 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 82.72 | |
| cd07198 | 172 | Patatin Patatin-like phospholipase. Patatin is a s | 82.4 | |
| cd01714 | 202 | ETF_beta The electron transfer flavoprotein (ETF) | 81.97 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 81.97 | |
| cd07207 | 194 | Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho | 80.71 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=234.09 Aligned_cols=243 Identities=72% Similarity=1.238 Sum_probs=164.5
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++.|+|+++|+||||.|+.+..........++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 51 ~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 130 (294)
T PLN02824 51 VLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGV 130 (294)
T ss_pred HHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEE
Confidence 36678999999999999998764211111136899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++..........+.........+...+........+.............+...+........+..+.+.........
T Consensus 131 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (294)
T PLN02824 131 MLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGA 210 (294)
T ss_pred EEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchH
Confidence 99998653221111111111112222222211111222222222333334444333433334445555555444433333
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHh
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHT 241 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 241 (260)
...+..+..........+.++++++|+++|+|++|.+++.+..+.+.+..+++++++++++||+++.|+|+++++.|.+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (294)
T PLN02824 211 VDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESF 290 (294)
T ss_pred HHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 33333333222222223557889999999999999999999998888888889999999999999999999999999999
Q ss_pred hhh
Q 024971 242 LSY 244 (260)
Q Consensus 242 l~~ 244 (260)
++.
T Consensus 291 l~~ 293 (294)
T PLN02824 291 VAR 293 (294)
T ss_pred Hhc
Confidence 964
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=222.14 Aligned_cols=239 Identities=34% Similarity=0.570 Sum_probs=154.9
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHh-hCccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV-MEPEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~-~~p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+.+. ...++++++++++.+++++++.++++|+||||||.+++.++. .+|++|++
T Consensus 110 ~L~~~~~via~Dl~G~G~S~~~~------~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~ 183 (360)
T PLN02679 110 VLAKNYTVYAIDLLGFGASDKPP------GFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRG 183 (360)
T ss_pred HHhcCCEEEEECCCCCCCCCCCC------CccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCE
Confidence 46789999999999999998764 246899999999999999999999999999999999999887 47999999
Q ss_pred ceEeccCccccccCCCC-CCCc---chhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 81 MILLNISLRMLHIKKQP-WYGR---PLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+|++++........... +... .....+............++........+...+...+.......++....+....
T Consensus 184 LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T PLN02679 184 LVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPA 263 (360)
T ss_pred EEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhc
Confidence 99999864321100000 0000 0000000000111111111111122223333333333333334445544443332
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH-----HHHhhccCCCccEEEeCCCCCCcchhch
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-----GRAYGNFDSVEDFIVLPNVGHCPQVSLY 231 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~~~~p 231 (260)
........+..........+....+.++++|+|+++|++|.++|.+. .+.+.+.++++++++++++||++++|+|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~P 343 (360)
T PLN02679 264 DDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRP 343 (360)
T ss_pred cCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCH
Confidence 33333333333322111122234577899999999999999998763 2456677899999999999999999999
Q ss_pred hHHHHHHHHhhhhcc
Q 024971 232 LSLSSACLHTLSYLH 246 (260)
Q Consensus 232 ~~~~~~i~~~l~~~~ 246 (260)
+++++.|.+|++.+.
T Consensus 344 e~~~~~I~~FL~~~~ 358 (360)
T PLN02679 344 DLVHEKLLPWLAQLP 358 (360)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998654
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=207.67 Aligned_cols=222 Identities=18% Similarity=0.202 Sum_probs=144.8
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ..++++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++
T Consensus 47 ~L~~~~~vi~~Dl~G~G~S~~~~-------~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~l 119 (276)
T TIGR02240 47 ALDPDLEVIAFDVPGVGGSSTPR-------HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKL 119 (276)
T ss_pred HhccCceEEEECCCCCCCCCCCC-------CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhhe
Confidence 47789999999999999998654 46799999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++.......... . .......... . +............. +.......++..............
T Consensus 120 vl~~~~~~~~~~~~~-----~--~~~~~~~~~~---~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 184 (276)
T TIGR02240 120 ILAATAAGAVMVPGK-----P--KVLMMMASPR---R-YIQPSHGIHIAPDI----YGGAFRRDPELAMAHASKVRSGGK 184 (276)
T ss_pred EEeccCCccccCCCc-----h--hHHHHhcCch---h-hhccccccchhhhh----ccceeeccchhhhhhhhhcccCCC
Confidence 999987542100000 0 0000000000 0 00000000000000 000000011111111111111111
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHh
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHT 241 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 241 (260)
............ ......++++++|+++|+|++|.+++++..+.+.+..++++++++++ ||+++.|+|+++++.|.+|
T Consensus 185 ~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~f 262 (276)
T TIGR02240 185 LGYYWQLFAGLG-WTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKF 262 (276)
T ss_pred chHHHHHHHHcC-CchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHH
Confidence 111111111111 11134578899999999999999999999999999999999999985 9999999999999999999
Q ss_pred hhhccc
Q 024971 242 LSYLHT 247 (260)
Q Consensus 242 l~~~~~ 247 (260)
++..+.
T Consensus 263 l~~~~~ 268 (276)
T TIGR02240 263 LAEERQ 268 (276)
T ss_pred HHHhhh
Confidence 987544
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=203.79 Aligned_cols=221 Identities=16% Similarity=0.112 Sum_probs=140.8
Q ss_pred C-CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 3 L-AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 3 L-~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
| +++|+|+++|+||||.|+.+. ...++++++++|+.++++.++. ++++++||||||.+++.+|.++|++|++
T Consensus 26 L~~~~~~via~Dl~G~G~S~~~~------~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~ 99 (255)
T PLN02965 26 LDAAGFKSTCVDLTGAGISLTDS------NTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISM 99 (255)
T ss_pred HhhCCceEEEecCCcCCCCCCCc------cccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeE
Confidence 5 568999999999999997654 2357899999999999999987 4999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHH-hcChH---HH-HHHHHhccCCCCcccH-HHHHHHhc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM-VATSE---SV-RNILCQCYNDTSQVTE-ELVEKILQ 154 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~-~~~~~~~~ 154 (260)
+|++++......... ............ ......... ..... .. .......+........ ........
T Consensus 100 lvl~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (255)
T PLN02965 100 AIYVAAAMVKPGSII----SPRLKNVMEGTE---KIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLR 172 (255)
T ss_pred EEEEccccCCCCCCc----cHHHHhhhhccc---cceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcC
Confidence 999998632110000 000000000000 000000000 00000 00 0000000000000000 00001110
Q ss_pred cCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHH
Q 024971 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
. .....+.... .....+.++++|+++++|++|.++|++..+.+.+.++++++++++++||++++|+|+++
T Consensus 173 ~----~~~~~~~~~~------~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v 242 (255)
T PLN02965 173 P----APVRAFQDLD------KLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTL 242 (255)
T ss_pred C----CCCcchhhhh------hccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHH
Confidence 0 0000010000 01224557899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcc
Q 024971 235 SSACLHTLSYLH 246 (260)
Q Consensus 235 ~~~i~~~l~~~~ 246 (260)
++.|.+|+++++
T Consensus 243 ~~~l~~~~~~~~ 254 (255)
T PLN02965 243 FQYLLQAVSSLQ 254 (255)
T ss_pred HHHHHHHHHHhc
Confidence 999999998875
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=207.05 Aligned_cols=233 Identities=29% Similarity=0.532 Sum_probs=155.3
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ..++.+.+++++.++++.++.++++++|||+||.+++.+|.++|++|+++
T Consensus 108 ~l~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~l 180 (354)
T PLN02578 108 ELAKKYKVYALDLLGFGWSDKAL-------IEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGV 180 (354)
T ss_pred HHhcCCEEEEECCCCCCCCCCcc-------cccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceE
Confidence 36788999999999999998765 46899999999999999999899999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCC----Ccch-----hHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHH
Q 024971 82 ILLNISLRMLHIKKQPWY----GRPL-----IRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (260)
|++++............. .... ............ ....+.....+..........+.......+...+.+
T Consensus 181 vLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (354)
T PLN02578 181 ALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVV-LGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESI 259 (354)
T ss_pred EEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHH
Confidence 999886543211110000 0000 000000000000 000011112222233333333333333444444444
Q ss_pred hccCCccchHHHHHHHHhh----hCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcch
Q 024971 153 LQPGLETGAADVFLEFICY----SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 228 (260)
............+...... .......+.++++++|+++|+|++|.+++.+..+.+.+..|+.+++++ ++||+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~ 338 (354)
T PLN02578 260 TEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHD 338 (354)
T ss_pred HhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccc
Confidence 3333333333333332211 112222456788999999999999999999999999999999999999 58999999
Q ss_pred hchhHHHHHHHHhhh
Q 024971 229 SLYLSLSSACLHTLS 243 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~ 243 (260)
|+|+++++.|.+|++
T Consensus 339 e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 339 EVPEQVNKALLEWLS 353 (354)
T ss_pred cCHHHHHHHHHHHHh
Confidence 999999999999985
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=197.49 Aligned_cols=235 Identities=21% Similarity=0.281 Sum_probs=151.2
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
.||+|+|+|+||+|.|+.+.. ...|++..++.|+..++++++.++++++||+||+++|+.+|..+|++|+++|.+
T Consensus 70 ~~~rviA~DlrGyG~Sd~P~~-----~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~ 144 (322)
T KOG4178|consen 70 RGYRVIAPDLRGYGFSDAPPH-----ISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTL 144 (322)
T ss_pred cceEEEecCCCCCCCCCCCCC-----cceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEe
Confidence 469999999999999999885 378999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCCCCcchhHHHhh-hhhhhhhHHHHHHHhcChHHHHHHHHhccC-----------CCCcccHHHHHHH
Q 024971 85 NISLRMLHIKKQPWYGRPLIRSFQN-LLRNTAAGKLFYKMVATSESVRNILCQCYN-----------DTSQVTEELVEKI 152 (260)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 152 (260)
+.+...+...........+...... ..+........+.....+.....+...... .......+..+.+
T Consensus 145 nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~ 224 (322)
T KOG4178|consen 145 NVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFY 224 (322)
T ss_pred cCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHH
Confidence 9876522111111000000011100 011111111111111111111111111000 0112334444444
Q ss_pred hccCCcc---chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH-HHHHhhccCCCc-cEEEeCCCCCCcc
Q 024971 153 LQPGLET---GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVE-DFIVLPNVGHCPQ 227 (260)
Q Consensus 153 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~gH~~~ 227 (260)
....... +..+.+.++..... .....+.++++|+++++|+.|.+.+.. ..+.+.+..++. +.++++|+||+++
T Consensus 225 ~~~f~~~g~~gplNyyrn~~r~w~--a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vq 302 (322)
T KOG4178|consen 225 VSKFQIDGFTGPLNYYRNFRRNWE--AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQ 302 (322)
T ss_pred HhccccccccccchhhHHHhhCch--hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCccccc
Confidence 4443222 23333443333221 113457789999999999999988766 344455667765 7888999999999
Q ss_pred hhchhHHHHHHHHhhhhcc
Q 024971 228 VSLYLSLSSACLHTLSYLH 246 (260)
Q Consensus 228 ~~~p~~~~~~i~~~l~~~~ 246 (260)
.|+|+++++.+.+|++...
T Consensus 303 qe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 303 QEKPQEVNQAILGFINSFS 321 (322)
T ss_pred ccCHHHHHHHHHHHHHhhc
Confidence 9999999999999998754
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=205.82 Aligned_cols=231 Identities=19% Similarity=0.206 Sum_probs=142.6
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++.|+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+|+.++.++|++|+++
T Consensus 49 ~L~~~~~via~D~~G~G~S~~~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 121 (295)
T PRK03592 49 HLAGLGRCLAPDLIGMGASDKPD-------IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGI 121 (295)
T ss_pred HHhhCCEEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEE
Confidence 46677899999999999998765 35799999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++......... .... .......+.......... ..........+.... .....++....+.........
T Consensus 122 il~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 193 (295)
T PRK03592 122 AFMEAIVRPMTWDD---FPPA-VRELFQALRSPGEGEEMV--LEENVFIERVLPGSI--LRPLSDEEMAVYRRPFPTPES 193 (295)
T ss_pred EEECCCCCCcchhh---cchh-HHHHHHHHhCcccccccc--cchhhHHhhcccCcc--cccCCHHHHHHHHhhcCCchh
Confidence 99998532211000 0000 011111111100000000 000000111111100 011222322222221111111
Q ss_pred HHHHHHHHhhhC-----------CCCCCccCCCCCCCEEEEecCCCCCCChHHHHH-hhccCCCccEEEeCCCCCCcchh
Q 024971 162 ADVFLEFICYSG-----------GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNFDSVEDFIVLPNVGHCPQVS 229 (260)
Q Consensus 162 ~~~~~~~~~~~~-----------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~ 229 (260)
......+..... .......+.++++|+|+|+|++|.++++..... +.+..+++++++++++||+++.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 273 (295)
T PRK03592 194 RRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQED 273 (295)
T ss_pred hhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhc
Confidence 111111110000 001123467889999999999999995554444 45567889999999999999999
Q ss_pred chhHHHHHHHHhhhhccc
Q 024971 230 LYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 230 ~p~~~~~~i~~~l~~~~~ 247 (260)
+|+++++.|.+|++....
T Consensus 274 ~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 274 SPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CHHHHHHHHHHHHHHhcc
Confidence 999999999999986543
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=194.07 Aligned_cols=218 Identities=18% Similarity=0.174 Sum_probs=135.9
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+... .++++++++++.+ +..++++++||||||.+++.+|.++|++|+++
T Consensus 35 ~L~~~~~vi~~Dl~G~G~S~~~~--------~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 102 (256)
T PRK10349 35 ELSSHFTLHLVDLPGFGRSRGFG--------ALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQAL 102 (256)
T ss_pred HHhcCCEEEEecCCCCCCCCCCC--------CCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheE
Confidence 46788999999999999997532 4678888777654 45689999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHH--HHhccCCcc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVE--KILQPGLET 159 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 159 (260)
|++++.+..................+...+.. ........++................ .........
T Consensus 103 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (256)
T PRK10349 103 VTVASSPCFSARDEWPGIKPDVLAGFQQQLSD-----------DFQRTVERFLALQTMGTETARQDARALKKTVLALPMP 171 (256)
T ss_pred EEecCccceecCCCCCcccHHHHHHHHHHHHh-----------chHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCC
Confidence 99998644321111110000001111100000 00011111111100001111111111 011111111
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
. ..............+..+.+.++++|+++++|++|.++|.+..+.+.+.++++++++++++||++++|+|++|++.+.
T Consensus 172 ~-~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 172 E-VDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred c-HHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 1 111111111111223345678899999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 024971 240 HTLS 243 (260)
Q Consensus 240 ~~l~ 243 (260)
+|-+
T Consensus 251 ~~~~ 254 (256)
T PRK10349 251 ALKQ 254 (256)
T ss_pred HHhc
Confidence 8854
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=196.51 Aligned_cols=221 Identities=19% Similarity=0.160 Sum_probs=137.8
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
++||+|+++|+||||.|+.... .......+++++.++++.++.++++++||||||.+++.+|.++|++|+++|+
T Consensus 58 ~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 131 (282)
T TIGR03343 58 DAGYRVILKDSPGFNKSDAVVM------DEQRGLVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLIL 131 (282)
T ss_pred hCCCEEEEECCCCCCCCCCCcC------cccccchhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEE
Confidence 4689999999999999986542 1112225688999999999999999999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc-cchH
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE-TGAA 162 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 162 (260)
+++....... .... ............... .....................+..+........ ....
T Consensus 132 ~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (282)
T TIGR03343 132 MGPGGLGPSL-FAPM-PMEGIKLLFKLYAEP-----------SYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHL 198 (282)
T ss_pred ECCCCCCccc-cccC-chHHHHHHHHHhcCC-----------CHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHH
Confidence 9975321100 0000 000000010000000 001111111111111111122221111110000 0000
Q ss_pred HHHHHHHhh--hCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHH
Q 024971 163 DVFLEFICY--SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLH 240 (260)
Q Consensus 163 ~~~~~~~~~--~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 240 (260)
..+...... .........++++++|+++++|++|.+++++..+.+.+.+|++++++++++||+++.|+|+++++.|.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~ 278 (282)
T TIGR03343 199 KNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVID 278 (282)
T ss_pred HHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHH
Confidence 111100000 001111345778999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh
Q 024971 241 TLS 243 (260)
Q Consensus 241 ~l~ 243 (260)
|++
T Consensus 279 fl~ 281 (282)
T TIGR03343 279 FLR 281 (282)
T ss_pred Hhh
Confidence 985
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-31 Score=192.99 Aligned_cols=214 Identities=16% Similarity=0.176 Sum_probs=140.2
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|..+. .++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 38 ~l~~~~~vi~~D~~G~G~s~~~~--------~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~l 109 (255)
T PRK10673 38 DLVNDHDIIQVDMRNHGLSPRDP--------VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKL 109 (255)
T ss_pred HHhhCCeEEEECCCCCCCCCCCC--------CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceE
Confidence 36789999999999999998643 4799999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc--
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET-- 159 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 159 (260)
|++++.+.... ..........+...... ...........+..... ...............
T Consensus 110 vli~~~~~~~~----~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 171 (255)
T PRK10673 110 VAIDIAPVDYH----VRRHDEIFAAINAVSEA---------GATTRQQAAAIMRQHLN-----EEGVIQFLLKSFVDGEW 171 (255)
T ss_pred EEEecCCCCcc----chhhHHHHHHHHHhhhc---------ccccHHHHHHHHHHhcC-----CHHHHHHHHhcCCccee
Confidence 99986532110 00000000000000000 00000000111111000 001111111000000
Q ss_pred -chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 160 -GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
.........+.... ....++++++|+|+|+|++|..++.+..+.+.+..+++++++++++||++++++|+++++.|
T Consensus 172 ~~~~~~~~~~~~~~~---~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l 248 (255)
T PRK10673 172 RFNVPVLWDQYPHIV---GWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAI 248 (255)
T ss_pred EeeHHHHHHhHHHHh---CCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHH
Confidence 00111111111111 12356778999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhh
Q 024971 239 LHTLSY 244 (260)
Q Consensus 239 ~~~l~~ 244 (260)
.+|++.
T Consensus 249 ~~fl~~ 254 (255)
T PRK10673 249 RRYLND 254 (255)
T ss_pred HHHHhc
Confidence 999863
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-31 Score=194.13 Aligned_cols=229 Identities=17% Similarity=0.155 Sum_probs=143.3
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++++++
T Consensus 50 ~l~~~~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 123 (278)
T TIGR03056 50 PLARSFRVVAPDLPGHGFTRAPF------RFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMV 123 (278)
T ss_pred HHhhCcEEEeecCCCCCCCCCcc------ccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceE
Confidence 46788999999999999998765 246899999999999999999899999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++......... .. ..+...... ............................. .........+.........
T Consensus 124 v~~~~~~~~~~~~~-~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 196 (278)
T TIGR03056 124 VGINAALMPFEGMA-GT-LFPYMARVL--ACNPFTPPMMSRGAADQQRVERLIRDTGS---LLDKAGMTYYGRLIRSPAH 196 (278)
T ss_pred EEEcCccccccccc-cc-ccchhhHhh--hhcccchHHHHhhcccCcchhHHhhcccc---ccccchhhHHHHhhcCchh
Confidence 99988643211000 00 000000000 00000000000000011111111111000 0011111111100000000
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHh
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHT 241 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 241 (260)
...................++++++|+++++|++|.++|.+..+.+.+..+++++++++++||+++.|.|+++++.|.+|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 276 (278)
T TIGR03056 197 VDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQA 276 (278)
T ss_pred hhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHH
Confidence 11111111111111113457788999999999999999999999999889999999999999999999999999999999
Q ss_pred hh
Q 024971 242 LS 243 (260)
Q Consensus 242 l~ 243 (260)
++
T Consensus 277 ~~ 278 (278)
T TIGR03056 277 AE 278 (278)
T ss_pred hC
Confidence 74
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-31 Score=199.20 Aligned_cols=237 Identities=19% Similarity=0.184 Sum_probs=141.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHH-HhhcCCceE-EEEeChhhHHHHHHHhhCccchhhc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC-KDVVKDQAF-FICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
+++|+|+++|+||||.|+.+..........++++++++++.+++ +++++++++ ++||||||.+|+.+|.++|++|+++
T Consensus 103 ~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~L 182 (360)
T PRK06489 103 ASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDAL 182 (360)
T ss_pred ccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhhee
Confidence 68899999999999999865421000002478999999988854 889999985 8999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcch-hHHHhhhhh----h-h--h-hHHHHHHH---hcChHHHHHHHHhccCCCCcccHHHH
Q 024971 82 ILLNISLRMLHIKKQPWYGRPL-IRSFQNLLR----N-T--A-AGKLFYKM---VATSESVRNILCQCYNDTSQVTEELV 149 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~-~--~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (260)
|++++.+..... ..+..... ......... . . . ........ ........ ... ............
T Consensus 183 VLi~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~ 257 (360)
T PRK06489 183 MPMASQPTEMSG--RNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLA--YQA-QAPTRAAADKLV 257 (360)
T ss_pred eeeccCcccccH--HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHH--HHH-hcCChHHHHHHH
Confidence 999875321100 00000000 000000000 0 0 0 00000000 00000000 000 000000011111
Q ss_pred HHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHH--HHhhccCCCccEEEeCCC----C
Q 024971 150 EKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG--RAYGNFDSVEDFIVLPNV----G 223 (260)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~----g 223 (260)
........... ...+..........+..+.+++|++|+|+|+|++|.++|++.. +.+.+.+|++++++++++ |
T Consensus 258 ~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~G 336 (360)
T PRK06489 258 DERLAAPVTAD-ANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRG 336 (360)
T ss_pred HHHHHhhhhcC-HHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCC
Confidence 21111111111 1122111222222233567889999999999999999998865 778888999999999986 9
Q ss_pred CCcchhchhHHHHHHHHhhhhccc
Q 024971 224 HCPQVSLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 224 H~~~~~~p~~~~~~i~~~l~~~~~ 247 (260)
|.++ ++|+++++.|.+|++.+.+
T Consensus 337 H~~~-e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 337 HGTT-GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred cccc-cCHHHHHHHHHHHHHhccc
Confidence 9997 8999999999999987754
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-31 Score=197.00 Aligned_cols=218 Identities=20% Similarity=0.243 Sum_probs=135.1
Q ss_pred CC-CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 3 L~-~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
|+ +||+|+++|+||||.|+.+.. ...++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 69 L~~~gy~vi~~Dl~G~G~S~~~~~-----~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 143 (302)
T PRK00870 69 LAAAGHRVIAPDLIGFGRSDKPTR-----REDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARL 143 (302)
T ss_pred HHhCCCEEEEECCCCCCCCCCCCC-----cccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEE
Confidence 54 589999999999999976542 135799999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++......... . .....+......... . .....+.... ......+....+.........
T Consensus 144 vl~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~--~---------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 205 (302)
T PRK00870 144 VVANTGLPTGDGPM----P-DAFWAWRAFSQYSPV--L---------PVGRLVNGGT--VRDLSDAVRAAYDAPFPDESY 205 (302)
T ss_pred EEeCCCCCCccccc----h-HHHhhhhcccccCch--h---------hHHHHhhccc--cccCCHHHHHHhhcccCChhh
Confidence 99987532110000 0 000000000000000 0 0000000000 000111111111000000000
Q ss_pred HHHHHHHHhhh--C--------CCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCcc---EEEeCCCCCCcch
Q 024971 162 ADVFLEFICYS--G--------GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED---FIVLPNVGHCPQV 228 (260)
Q Consensus 162 ~~~~~~~~~~~--~--------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~ 228 (260)
........... . .......+.++++|+++|+|++|.++|... +.+.+.+++++ +++++++||++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~ 284 (302)
T PRK00870 206 KAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQE 284 (302)
T ss_pred hcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchh
Confidence 00000000000 0 000013467899999999999999999766 77888888776 8899999999999
Q ss_pred hchhHHHHHHHHhhhh
Q 024971 229 SLYLSLSSACLHTLSY 244 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~ 244 (260)
|+|+++++.|.+|++.
T Consensus 285 e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 285 DSGEELAEAVLEFIRA 300 (302)
T ss_pred hChHHHHHHHHHHHhc
Confidence 9999999999999864
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=203.38 Aligned_cols=227 Identities=19% Similarity=0.274 Sum_probs=137.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHH-HHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN-DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
++|+|+++|+||||.|+.+. ...++++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+
T Consensus 231 ~~yrVia~Dl~G~G~S~~p~------~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVL 304 (481)
T PLN03087 231 STYRLFAVDLLGFGRSPKPA------DSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTL 304 (481)
T ss_pred CCCEEEEECCCCCCCCcCCC------CCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEE
Confidence 68999999999999998764 24689999999994 899999999999999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhh-----hhhhhHH---HHHHHhcC--------hHHHHHHHHhccCCCCcccHH
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLL-----RNTAAGK---LFYKMVAT--------SESVRNILCQCYNDTSQVTEE 147 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 147 (260)
++++....... ............ ....... ..+..... .......+...... ......
T Consensus 305 i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~ 378 (481)
T PLN03087 305 LAPPYYPVPKG-----VQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTR-NRMRTF 378 (481)
T ss_pred ECCCccccccc-----hhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhh-hhhhHH
Confidence 99864321100 000000000000 0000000 00000000 00000000000000 000001
Q ss_pred HHHHHhccCCccchHHHHHHHHhhhC---CCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCC
Q 024971 148 LVEKILQPGLETGAADVFLEFICYSG---GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGH 224 (260)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 224 (260)
..+.+..... ............... .........++++|+|+|+|++|.++|++..+.+++.+|++++++++++||
T Consensus 379 l~~~~~~~~~-~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH 457 (481)
T PLN03087 379 LIEGFFCHTH-NAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDH 457 (481)
T ss_pred HHHHHHhccc-hhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 1111100000 000001000000000 000012233689999999999999999999999999999999999999999
Q ss_pred Ccch-hchhHHHHHHHHhhhh
Q 024971 225 CPQV-SLYLSLSSACLHTLSY 244 (260)
Q Consensus 225 ~~~~-~~p~~~~~~i~~~l~~ 244 (260)
++++ ++|+++++.|.+|.++
T Consensus 458 ~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 458 ITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred cchhhcCHHHHHHHHHHHhhc
Confidence 9885 9999999999999865
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=190.16 Aligned_cols=222 Identities=16% Similarity=0.185 Sum_probs=136.8
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ...++++++++++.+++++++.++++++||||||.+++.++..+|++|+++
T Consensus 56 ~l~~~~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~l 129 (286)
T PRK03204 56 ALRDRFRCVAPDYLGFGLSERPS------GFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGV 129 (286)
T ss_pred HHhCCcEEEEECCCCCCCCCCCC------ccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEE
Confidence 46778999999999999998765 235789999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++..... ... ....+.............. .........+.... ...........+.........
T Consensus 130 vl~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 196 (286)
T PRK03204 130 VLGNTWFWPA-----DTL---AMKAFSRVMSSPPVQYAIL---RRNFFVERLIPAGT--EHRPSSAVMAHYRAVQPNAAA 196 (286)
T ss_pred EEECccccCC-----Cch---hHHHHHHHhccccchhhhh---hhhHHHHHhccccc--cCCCCHHHHHHhcCCCCCHHH
Confidence 9988753110 000 0000000000000000000 00000011111100 111222222222222111111
Q ss_pred HHHHHHHHhhhC--C---CCCCccCC--CCCCCEEEEecCCCCCCChH-HHHHhhccCCCccEEEeCCCCCCcchhchhH
Q 024971 162 ADVFLEFICYSG--G---PLPEELLP--QVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQVSLYLS 233 (260)
Q Consensus 162 ~~~~~~~~~~~~--~---~~~~~~~~--~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 233 (260)
............ . ......+. .+++|+++|+|++|.++++. ..+.+.+.+|+.++++++++||++++|+|++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~ 276 (286)
T PRK03204 197 RRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDR 276 (286)
T ss_pred HHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHH
Confidence 111110000000 0 00001111 12799999999999987654 5678888999999999999999999999999
Q ss_pred HHHHHHHhh
Q 024971 234 LSSACLHTL 242 (260)
Q Consensus 234 ~~~~i~~~l 242 (260)
+++.|.+|+
T Consensus 277 ~~~~i~~~~ 285 (286)
T PRK03204 277 IAAAIIERF 285 (286)
T ss_pred HHHHHHHhc
Confidence 999999987
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=194.03 Aligned_cols=233 Identities=12% Similarity=0.064 Sum_probs=136.8
Q ss_pred CCC-CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHH-----HHHHHHHH----HHHhhcCCc-eEEEEeChhhHHHHHH
Q 024971 2 VLA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFE-----TWASQLND----FCKDVVKDQ-AFFICNSIGGLVGLQA 70 (260)
Q Consensus 2 ~L~-~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~~~~~~~~-~~lvGhS~Gg~~a~~~ 70 (260)
.|. ++|+||++|+||||.|+.+... ...++++ .+++|+.. +++++++++ ++||||||||++|+.+
T Consensus 66 ~l~~~~~~vi~~D~~G~G~S~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~ 141 (339)
T PRK07581 66 ALDPEKYFIIIPNMFGNGLSSSPSNT----PAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHW 141 (339)
T ss_pred ccCcCceEEEEecCCCCCCCCCCCCC----CCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHH
Confidence 454 6899999999999999865421 0123333 24555554 778899999 4799999999999999
Q ss_pred HhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhh--------------hhhhHHHHHHHhcChHHHHHHHHh
Q 024971 71 AVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLR--------------NTAAGKLFYKMVATSESVRNILCQ 136 (260)
Q Consensus 71 a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 136 (260)
|.++|++|+++|++++....... ...........+. ...... .............++..
T Consensus 142 a~~~P~~V~~Lvli~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 214 (339)
T PRK07581 142 AVRYPDMVERAAPIAGTAKTTPH------NFVFLEGLKAALTADPAFNGGWYAEPPERGLRA-HARVYAGWGFSQAFYRQ 214 (339)
T ss_pred HHHCHHHHhhheeeecCCCCCHH------HHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHH-HHHHHHHHHhHHHHHHh
Confidence 99999999999999876431100 0000000000000 000000 00000000000011110
Q ss_pred c-cCCCC-cccHHHHHHHhccC---CccchHHHHH-HHHhh--hCC----CCCCccCCCCCCCEEEEecCCCCCCChHHH
Q 024971 137 C-YNDTS-QVTEELVEKILQPG---LETGAADVFL-EFICY--SGG----PLPEELLPQVKCPVLIAWGDKDPWEPIELG 204 (260)
Q Consensus 137 ~-~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~--~~~----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 204 (260)
. +.... ....+....+.... .......... .+... ... .+....++++++|+|+|+|++|.++|++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~ 294 (339)
T PRK07581 215 ELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDC 294 (339)
T ss_pred hhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHH
Confidence 0 00000 00011111111111 1111111111 11110 001 123456788999999999999999999999
Q ss_pred HHhhccCCCccEEEeCC-CCCCcchhchhHHHHHHHHhhhhc
Q 024971 205 RAYGNFDSVEDFIVLPN-VGHCPQVSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 205 ~~~~~~~~~~~~~~~~~-~gH~~~~~~p~~~~~~i~~~l~~~ 245 (260)
+.+.+.+++++++++++ +||++++++|+++++.|.+|++++
T Consensus 295 ~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 295 EAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred HHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 99999899999999998 999999999999999999999765
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=192.48 Aligned_cols=228 Identities=16% Similarity=0.110 Sum_probs=138.8
Q ss_pred CC-CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCce-EEEEeChhhHHHHHHHhhCccchh
Q 024971 2 VL-AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQA-FFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 2 ~L-~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
.| +++|+||++|+||||.|.. ..++++++++|+.+++++++.++. +++||||||.+|+.+|.++|++|+
T Consensus 94 ~L~~~~~~Vi~~Dl~G~g~s~~---------~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~ 164 (343)
T PRK08775 94 ALDPARFRLLAFDFIGADGSLD---------VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVR 164 (343)
T ss_pred ccCccccEEEEEeCCCCCCCCC---------CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhh
Confidence 35 5789999999999998842 246789999999999999999775 799999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhh---h-h---h----hhHHHH-HHHhcChHHHHHHHHhccCC-CCccc-
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLL---R-N---T----AAGKLF-YKMVATSESVRNILCQCYND-TSQVT- 145 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~---~----~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~- 145 (260)
++|++++..... +. ........... . . . ...... .........+...+...... .....
T Consensus 165 ~LvLi~s~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T PRK08775 165 TLVVVSGAHRAH-----PY--AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRV 237 (343)
T ss_pred eEEEECccccCC-----HH--HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccc
Confidence 999999864221 00 00000000000 0 0 0 000000 00011111111111110000 00000
Q ss_pred --HHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC-CCccEEEeCC-
Q 024971 146 --EELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-SVEDFIVLPN- 221 (260)
Q Consensus 146 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~- 221 (260)
...................+......... ....+.++++|+|+++|++|.++|++..+.+.+.. ++++++++++
T Consensus 238 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~ 315 (343)
T PRK08775 238 AAEDYLDAAGAQYVARTPVNAYLRLSESIDL--HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSP 315 (343)
T ss_pred hHHHHHHHHHHHHHHhcChhHHHHHHHHHhh--cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCC
Confidence 11111000000000011111111111100 12346789999999999999999998888888766 7899999985
Q ss_pred CCCCcchhchhHHHHHHHHhhhhccc
Q 024971 222 VGHCPQVSLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 222 ~gH~~~~~~p~~~~~~i~~~l~~~~~ 247 (260)
+||++++|+|++|++.|.+||+....
T Consensus 316 aGH~~~lE~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 316 YGHDAFLKETDRIDAILTTALRSTGE 341 (343)
T ss_pred ccHHHHhcCHHHHHHHHHHHHHhccc
Confidence 99999999999999999999976543
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=187.64 Aligned_cols=217 Identities=19% Similarity=0.229 Sum_probs=141.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ..++++++++++.++++.++.++++++||||||.+++.+|.++|++|+++
T Consensus 35 ~l~~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~l 107 (251)
T TIGR02427 35 ALTPDFRVLRYDKRGHGLSDAPE-------GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRAL 107 (251)
T ss_pred HhhcccEEEEecCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHH
Confidence 46789999999999999997644 46799999999999999999899999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++....... ............ ....... .......+...+... .......+...... ..
T Consensus 108 i~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~ 169 (251)
T TIGR02427 108 VLSNTAAKIGTP-------ESWNARIAAVRA-EGLAALA------DAVLERWFTPGFREA---HPARLDLYRNMLVR-QP 169 (251)
T ss_pred hhccCccccCch-------hhHHHHHhhhhh-ccHHHHH------HHHHHHHcccccccC---ChHHHHHHHHHHHh-cC
Confidence 999876432110 000000000000 0000000 000000110001000 00111111100000 00
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHh
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHT 241 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 241 (260)
...+...............++++++|+++++|++|.++|.+..+.+.+..++.++++++++||+++.++|+++.+.|.+|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 249 (251)
T TIGR02427 170 PDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDF 249 (251)
T ss_pred HHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHH
Confidence 11111111111122223456788999999999999999999888888888999999999999999999999999999998
Q ss_pred hh
Q 024971 242 LS 243 (260)
Q Consensus 242 l~ 243 (260)
++
T Consensus 250 l~ 251 (251)
T TIGR02427 250 LR 251 (251)
T ss_pred hC
Confidence 74
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-30 Score=185.79 Aligned_cols=219 Identities=20% Similarity=0.210 Sum_probs=141.1
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|..+. ...++++++++++.+++++++.++++++||||||.+++.++.++|++|+++
T Consensus 35 ~l~~~~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~ 108 (257)
T TIGR03611 35 VLTQRFHVVTYDHRGTGRSPGEL------PPGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSL 108 (257)
T ss_pred HHHhccEEEEEcCCCCCCCCCCC------cccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHh
Confidence 35779999999999999998754 256899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHH---HHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY---KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
|++++...... ............+.......... ........ +... ............ ...
T Consensus 109 i~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~-~~~-- 172 (257)
T TIGR03611 109 VLINAWSRPDP------HTRRCFDVRIALLQHAGPEAYVHAQALFLYPADW----ISEN---AARLAADEAHAL-AHF-- 172 (257)
T ss_pred eeecCCCCCCh------hHHHHHHHHHHHHhccCcchhhhhhhhhhccccH----hhcc---chhhhhhhhhcc-ccc--
Confidence 99987542210 00000000000000000000000 00000000 0000 000000000000 000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
.. ..............+....+.++++|+++++|++|.++|.+..+.+.+..++++++.++++||+++.++|+++.+.|
T Consensus 173 ~~-~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 251 (257)
T TIGR03611 173 PG-KANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRAL 251 (257)
T ss_pred Cc-cHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHH
Confidence 00 11111111111122224567788999999999999999999999998889999999999999999999999999999
Q ss_pred HHhhh
Q 024971 239 LHTLS 243 (260)
Q Consensus 239 ~~~l~ 243 (260)
.+|++
T Consensus 252 ~~fl~ 256 (257)
T TIGR03611 252 LDFLK 256 (257)
T ss_pred HHHhc
Confidence 99985
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=182.40 Aligned_cols=217 Identities=17% Similarity=0.207 Sum_probs=135.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+... .++++++++++.+.+. ++++++||||||.+++.+|.++|++++++
T Consensus 26 ~l~~~~~vi~~d~~G~G~s~~~~--------~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 93 (245)
T TIGR01738 26 ELSAHFTLHLVDLPGHGRSRGFG--------PLSLADAAEAIAAQAP----DPAIWLGWSLGGLVALHIAATHPDRVRAL 93 (245)
T ss_pred hhccCeEEEEecCCcCccCCCCC--------CcCHHHHHHHHHHhCC----CCeEEEEEcHHHHHHHHHHHHCHHhhhee
Confidence 57789999999999999987543 4678888888766542 68999999999999999999999999999
Q ss_pred eEeccCccccccCCCC-CCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHH-hccCCCC-cccHHHHHHHhccCCc
Q 024971 82 ILLNISLRMLHIKKQP-WYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILC-QCYNDTS-QVTEELVEKILQPGLE 158 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~ 158 (260)
|++++.+......... .........+....... . ......+.. ....... ................
T Consensus 94 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (245)
T TIGR01738 94 VTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDD-Y----------QRTIERFLALQTLGTPTARQDARALKQTLLARPT 162 (245)
T ss_pred eEecCCcccccCCcccccCCHHHHHHHHHHhhhh-H----------HHHHHHHHHHHHhcCCccchHHHHHHHHhhccCC
Confidence 9998875432111111 00000000010000000 0 000011100 0001000 0000011111111111
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
.. ...+..........+....+.++++|+++++|++|.++|.+..+.+.+..+++++++++++||++++|+|+++++.|
T Consensus 163 ~~-~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 241 (245)
T TIGR01738 163 PN-VQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALL 241 (245)
T ss_pred CC-HHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHH
Confidence 11 11111111112222224457789999999999999999999999898889999999999999999999999999999
Q ss_pred HHhh
Q 024971 239 LHTL 242 (260)
Q Consensus 239 ~~~l 242 (260)
.+|+
T Consensus 242 ~~fi 245 (245)
T TIGR01738 242 VAFK 245 (245)
T ss_pred HhhC
Confidence 9985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=179.68 Aligned_cols=239 Identities=18% Similarity=0.252 Sum_probs=142.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++.++|+++|++|+|+|++|.=.. ........+++.+.+.....++++.+|+|||+||.+|..||.+||++|+.|
T Consensus 112 ~La~~~~vyaiDllG~G~SSRP~F~~---d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kL 188 (365)
T KOG4409|consen 112 DLAKIRNVYAIDLLGFGRSSRPKFSI---DPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKL 188 (365)
T ss_pred hhhhcCceEEecccCCCCCCCCCCCC---CcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceE
Confidence 57889999999999999999876211 123345588899999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhh--h--hhhhhHHHHHHHhcChHHHHHHHHhccCC-CCcccHHHHHHH-hcc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNL--L--RNTAAGKLFYKMVATSESVRNILCQCYND-TSQVTEELVEKI-LQP 155 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~ 155 (260)
||++|..........+....+........ . ...++..........+..........+.. .....++.+..| +..
T Consensus 189 iLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~ 268 (365)
T KOG4409|consen 189 ILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHC 268 (365)
T ss_pred EEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHh
Confidence 99999876654322222222211111000 0 00000000000001111111111111111 112233332222 222
Q ss_pred CCc-cchHHHHHHHHhhhCCC--CCCccCCCC--CCCEEEEecCCCCCCChHHHHHhhc--cCCCccEEEeCCCCCCcch
Q 024971 156 GLE-TGAADVFLEFICYSGGP--LPEELLPQV--KCPVLIAWGDKDPWEPIELGRAYGN--FDSVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 156 ~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~ 228 (260)
... +.....+..+....... .....+..+ +||+++|+|++|.+ +......+.+ ....++.++++++||.++.
T Consensus 269 n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvyl 347 (365)
T KOG4409|consen 269 NAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYL 347 (365)
T ss_pred cCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeec
Confidence 222 22222333332211110 012233333 49999999999975 4444444444 2345899999999999999
Q ss_pred hchhHHHHHHHHhhhh
Q 024971 229 SLYLSLSSACLHTLSY 244 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~ 244 (260)
++|+.|++.+.++++.
T Consensus 348 Dnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 348 DNPEFFNQIVLEECDK 363 (365)
T ss_pred CCHHHHHHHHHHHHhc
Confidence 9999999999988764
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=191.03 Aligned_cols=233 Identities=27% Similarity=0.385 Sum_probs=141.1
Q ss_pred CCCc--cEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 3 LAKS--HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 3 L~~~--~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
|++. ++|+++|++|+|.++..+. ...|+..++++.+..++...+..+++++|||+||.+|+.+|+.+|+.|++
T Consensus 81 L~~~~~~~v~aiDl~G~g~~s~~~~-----~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~ 155 (326)
T KOG1454|consen 81 LSKAKGLRVLAIDLPGHGYSSPLPR-----GPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDS 155 (326)
T ss_pred cccccceEEEEEecCCCCcCCCCCC-----CCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccc
Confidence 4444 9999999999995544332 35699999999999999999999999999999999999999999999999
Q ss_pred ce---EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHH---HHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc
Q 024971 81 MI---LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK---LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (260)
Q Consensus 81 lv---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
++ ++++........ .......+........... ...........................+........
T Consensus 156 lv~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (326)
T KOG1454|consen 156 LVLLDLLGPPVYSTPKG-----IKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSR 230 (326)
T ss_pred eeeecccccccccCCcc-----hhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheec
Confidence 99 444443221100 0000000000000000000 000000000000000111111111111121111111
Q ss_pred cCCccchHHHHHHHHhhhCC--CCCCccCCCCC-CCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhch
Q 024971 155 PGLETGAADVFLEFICYSGG--PLPEELLPQVK-CPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLY 231 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 231 (260)
.............+...... ......++++. ||+++++|++|.++|.+.+..+.+.+|++++++++++||.+++|+|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~P 310 (326)
T KOG1454|consen 231 PVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERP 310 (326)
T ss_pred ccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCH
Confidence 11011111111111111111 22233456666 9999999999999999999999998899999999999999999999
Q ss_pred hHHHHHHHHhhhhc
Q 024971 232 LSLSSACLHTLSYL 245 (260)
Q Consensus 232 ~~~~~~i~~~l~~~ 245 (260)
+++++.|..|+...
T Consensus 311 e~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 311 EEVAALLRSFIARL 324 (326)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999764
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=181.00 Aligned_cols=214 Identities=14% Similarity=0.109 Sum_probs=128.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccc-hhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI-CRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~-v~~ 80 (260)
.| ++|+|+++|+||||.|+.+. ..+++++++++.+++++++.++++++||||||.+|+.+|.++|+. |++
T Consensus 24 ~l-~~~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~ 94 (242)
T PRK11126 24 AL-PDYPRLYIDLPGHGGSAAIS--------VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCG 94 (242)
T ss_pred Hc-CCCCEEEecCCCCCCCCCcc--------ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccE
Confidence 35 47999999999999998654 248999999999999999999999999999999999999999664 999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
++++++.+.... . ................+ ........+...+...... .........+........
T Consensus 95 lvl~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 161 (242)
T PRK11126 95 LIVEGGNPGLQN--------A--EERQARWQNDRQWAQRF-RQEPLEQVLADWYQQPVFA--SLNAEQRQQLVAKRSNNN 161 (242)
T ss_pred EEEeCCCCCCCC--------H--HHHHHHHhhhHHHHHHh-ccCcHHHHHHHHHhcchhh--ccCccHHHHHHHhcccCC
Confidence 999887542110 0 00000000000000000 0000000111111000000 011111111111111000
Q ss_pred hHHHHHHHHh---hhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 161 AADVFLEFIC---YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 161 ~~~~~~~~~~---~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
......+.. .....+..+.+.++++|+++++|++|..+. . +.+. .++++++++++||+++.|+|+++++.
T Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~----~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~ 234 (242)
T PRK11126 162 -GAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-A----LAQQ-LALPLHVIPNAGHNAHRENPAAFAAS 234 (242)
T ss_pred -HHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-H----HHHH-hcCeEEEeCCCCCchhhhChHHHHHH
Confidence 011111111 111222345678899999999999998542 2 2222 36899999999999999999999999
Q ss_pred HHHhhhh
Q 024971 238 CLHTLSY 244 (260)
Q Consensus 238 i~~~l~~ 244 (260)
|.+|++.
T Consensus 235 i~~fl~~ 241 (242)
T PRK11126 235 LAQILRL 241 (242)
T ss_pred HHHHHhh
Confidence 9999865
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-29 Score=185.36 Aligned_cols=225 Identities=22% Similarity=0.311 Sum_probs=141.6
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+.... ...++++++++++.+++++++.++++|+|||+||.+++.+|.++|++|+++
T Consensus 149 ~L~~~~~Via~DlpG~G~S~~p~~~~---~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~l 225 (383)
T PLN03084 149 VLSKNYHAIAFDWLGFGFSDKPQPGY---GFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKL 225 (383)
T ss_pred HHhcCCEEEEECCCCCCCCCCCcccc---cccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEE
Confidence 46789999999999999998765210 135899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|+++++...... .....+... ........+... ........+.. .......++....+.........
T Consensus 226 ILi~~~~~~~~~--------~~p~~l~~~-~~~l~~~~~~~~--~~~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~ 292 (383)
T PLN03084 226 ILLNPPLTKEHA--------KLPSTLSEF-SNFLLGEIFSQD--PLRASDKALTS--CGPYAMKEDDAMVYRRPYLTSGS 292 (383)
T ss_pred EEECCCCccccc--------cchHHHHHH-HHHHhhhhhhcc--hHHHHhhhhcc--cCccCCCHHHHHHHhccccCCcc
Confidence 999987422100 000001000 000000000000 00000001100 01111223333333332222221
Q ss_pred HHH-HHHHHhhhCCCC------CCcc--CCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchh
Q 024971 162 ADV-FLEFICYSGGPL------PEEL--LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 162 ~~~-~~~~~~~~~~~~------~~~~--~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~ 232 (260)
... ............ .... ..++++|+++++|++|.+++.+..+.+.+. ++.++++++++||++++|+|+
T Consensus 293 ~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe 371 (383)
T PLN03084 293 SGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGE 371 (383)
T ss_pred hHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHH
Confidence 111 111111110000 0001 135799999999999999999988888776 478999999999999999999
Q ss_pred HHHHHHHHhhh
Q 024971 233 SLSSACLHTLS 243 (260)
Q Consensus 233 ~~~~~i~~~l~ 243 (260)
++++.|.+|++
T Consensus 372 ~v~~~I~~Fl~ 382 (383)
T PLN03084 372 ELGGIISGILS 382 (383)
T ss_pred HHHHHHHHHhh
Confidence 99999999985
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=194.48 Aligned_cols=219 Identities=16% Similarity=0.190 Sum_probs=133.1
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCC------ceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD------QAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
+||+|+++|+||||.|+.+. ....+++++++|+.++++.+..+ +++|+||||||.+++.++.++|+++
T Consensus 114 ~g~~v~~~D~~G~G~S~~~~------~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v 187 (349)
T PLN02385 114 SGYGVFAMDYPGFGLSEGLH------GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAW 187 (349)
T ss_pred CCCEEEEecCCCCCCCCCCC------CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchh
Confidence 58999999999999998654 13458999999999999887543 7999999999999999999999999
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc-cCC
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ-PGL 157 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 157 (260)
+++|+++|......... .......+........... ........ ....+.. ........+.. ...
T Consensus 188 ~glVLi~p~~~~~~~~~----~~~~~~~~~~~~~~~~p~~----~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~ 253 (349)
T PLN02385 188 DGAILVAPMCKIADDVV----PPPLVLQILILLANLLPKA----KLVPQKDL---AELAFRD---LKKRKMAEYNVIAYK 253 (349)
T ss_pred hheeEeccccccccccc----CchHHHHHHHHHHHHCCCc----eecCCCcc---ccccccC---HHHHHHhhcCcceeC
Confidence 99999998653211000 0000000000000000000 00000000 0000000 00000000000 000
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC--CCccEEEeCCCCCCcchhchhH--
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD--SVEDFIVLPNVGHCPQVSLYLS-- 233 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~-- 233 (260)
...........+... ......+.++++|+|+++|++|.++|++..+.+.+.. +++++++++++||+++.++|++
T Consensus 254 ~~~~~~~~~~~l~~~--~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~ 331 (349)
T PLN02385 254 DKPRLRTAVELLRTT--QEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMI 331 (349)
T ss_pred CCcchHHHHHHHHHH--HHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhH
Confidence 000111111111110 0113457789999999999999999999988887765 5689999999999999999987
Q ss_pred --HHHHHHHhhhhc
Q 024971 234 --LSSACLHTLSYL 245 (260)
Q Consensus 234 --~~~~i~~~l~~~ 245 (260)
+.+.|.+|++..
T Consensus 332 ~~v~~~i~~wL~~~ 345 (349)
T PLN02385 332 FQVLDDIISWLDSH 345 (349)
T ss_pred HHHHHHHHHHHHHh
Confidence 777777887643
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=183.74 Aligned_cols=208 Identities=22% Similarity=0.343 Sum_probs=135.2
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++||+|+++|+||||.|+.+.. ...++++++++++.+++++++.++++++|||+||.+++.++.++|++|+++
T Consensus 20 ~l~~~~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 94 (228)
T PF12697_consen 20 ALARGYRVIAFDLPGHGRSDPPPD-----YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGL 94 (228)
T ss_dssp HHHTTSEEEEEECTTSTTSSSHSS-----GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEE
T ss_pred HHhCCCEEEEEecCCccccccccc-----cCCcchhhhhhhhhhcccccccccccccccccccccccccccccccccccc
Confidence 356899999999999999988652 146899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|+++|......... .......+........... . ......+.... .......+... .
T Consensus 95 vl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~------~~~~~~~~~~~-----~ 151 (228)
T PF12697_consen 95 VLLSPPPPLPDSPS----RSFGPSFIRRLLAWRSRSL---R-----RLASRFFYRWF------DGDEPEDLIRS-----S 151 (228)
T ss_dssp EEESESSSHHHHHC----HHHHHHHHHHHHHHHHHHH---H-----HHHHHHHHHHH------THHHHHHHHHH-----H
T ss_pred eeeccccccccccc----ccccchhhhhhhhcccccc---c-----ccccccccccc------ccccccccccc-----c
Confidence 99999864321000 0000000111110000000 0 00000000000 00111111000 0
Q ss_pred HHHHHHHHhh-hCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 162 ADVFLEFICY-SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
...+...... .........++++++|+++++|++|.+++.+..+.+.+..+++++++++++||++++++|++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 152 RRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred ccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 0111111000 000011345667799999999999999999999999988899999999999999999999999874
|
... |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-29 Score=186.36 Aligned_cols=233 Identities=16% Similarity=0.144 Sum_probs=138.8
Q ss_pred CCccEEEEEcCCC--CCCCCCCCC---CCCC--CCCCccHHHHHHHHHHHHHhhcCCc-eEEEEeChhhHHHHHHHhhCc
Q 024971 4 AKSHRVYSIDLIG--YGYSDKPNP---RDFF--DKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 4 ~~~~~v~~~D~~G--~G~S~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p 75 (260)
+++|+|+++|+|| ||.|..... .... ....++++++++++.+++++++.++ ++++||||||.+++.+|.++|
T Consensus 70 ~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p 149 (351)
T TIGR01392 70 TDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYP 149 (351)
T ss_pred CCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHCh
Confidence 6789999999999 555543211 0000 0125899999999999999999998 999999999999999999999
Q ss_pred cchhhceEeccCccccccCCCCCCCcchhHHHhhhhh-h-------------h----hhHHHHHH-HhcChHHHHHHHHh
Q 024971 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLR-N-------------T----AAGKLFYK-MVATSESVRNILCQ 136 (260)
Q Consensus 76 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~----~~~~~~~~-~~~~~~~~~~~~~~ 136 (260)
++|+++|++++....... . ............ . . ........ .....+.+...+..
T Consensus 150 ~~v~~lvl~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~ 223 (351)
T TIGR01392 150 ERVRAIVVLATSARHSAW-----C-IAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGR 223 (351)
T ss_pred HhhheEEEEccCCcCCHH-----H-HHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCc
Confidence 999999999987532110 0 000000000000 0 0 00000000 01111111111111
Q ss_pred ccCCC-Cc--------ccHHHHH----HHhccCCccchHHHHHHHHhhhCC----CCCCccCCCCCCCEEEEecCCCCCC
Q 024971 137 CYNDT-SQ--------VTEELVE----KILQPGLETGAADVFLEFICYSGG----PLPEELLPQVKCPVLIAWGDKDPWE 199 (260)
Q Consensus 137 ~~~~~-~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~P~l~i~g~~D~~~ 199 (260)
..... .. ....... .+... .................. .+..+.+++|++|+|+|+|++|.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~ 302 (351)
T TIGR01392 224 APQSGESPASGFDTRFQVESYLRYQGDKFVDR-FDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLF 302 (351)
T ss_pred CcccccccccccCccchHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCcccc
Confidence 10000 00 0011110 01110 011111111111111100 1224678899999999999999999
Q ss_pred ChHHHHHhhccCCCccEE-----EeCCCCCCcchhchhHHHHHHHHhhh
Q 024971 200 PIELGRAYGNFDSVEDFI-----VLPNVGHCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~-----~~~~~gH~~~~~~p~~~~~~i~~~l~ 243 (260)
|++..+.+.+.+++++++ +++++||++++++|+++++.|.+||+
T Consensus 303 p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 303 PPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 999999999999888765 56789999999999999999999974
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=186.00 Aligned_cols=238 Identities=13% Similarity=0.094 Sum_probs=142.1
Q ss_pred CCccEEEEEcCCCC-CCCCCCCCCCCC-------CCCCccHHHHHHHHHHHHHhhcCCc-eEEEEeChhhHHHHHHHhhC
Q 024971 4 AKSHRVYSIDLIGY-GYSDKPNPRDFF-------DKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 4 ~~~~~v~~~D~~G~-G~S~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~ 74 (260)
+++|+|+++|++|+ |.|+.+...... ....++++++++++.+++++++.++ ++++||||||.+++.+|.++
T Consensus 89 ~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 168 (379)
T PRK00175 89 TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDY 168 (379)
T ss_pred ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhC
Confidence 67999999999993 555433211000 0025899999999999999999999 58999999999999999999
Q ss_pred ccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhh--------------hh-----hHHHHH-HHhcChHHHHHHH
Q 024971 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN--------------TA-----AGKLFY-KMVATSESVRNIL 134 (260)
Q Consensus 75 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-----~~~~~~-~~~~~~~~~~~~~ 134 (260)
|++|+++|++++........ ............. .. ..+... ........+...+
T Consensus 169 p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f 242 (379)
T PRK00175 169 PDRVRSALVIASSARLSAQN------IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKF 242 (379)
T ss_pred hHhhhEEEEECCCcccCHHH------HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhc
Confidence 99999999999865321100 0000000000000 00 000000 0011111111111
Q ss_pred HhccCCCCc--------ccHHHHH----HHhccCCccchHHHHHHHHhhhCC-----CCCCccCCCCCCCEEEEecCCCC
Q 024971 135 CQCYNDTSQ--------VTEELVE----KILQPGLETGAADVFLEFICYSGG-----PLPEELLPQVKCPVLIAWGDKDP 197 (260)
Q Consensus 135 ~~~~~~~~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~P~l~i~g~~D~ 197 (260)
......... ....... .+... .................. .+..+.+++|++|+|+|+|++|.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~ 321 (379)
T PRK00175 243 GRELQSGELPFGFDVEFQVESYLRYQGDKFVER-FDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDW 321 (379)
T ss_pred CccccccccccCCCccchHHHHHHHHHHHHhhc-cCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCcc
Confidence 111100000 0011110 01111 111111111111111110 12245678999999999999999
Q ss_pred CCChHHHHHhhccCCCc----cEEEeC-CCCCCcchhchhHHHHHHHHhhhhcccc
Q 024971 198 WEPIELGRAYGNFDSVE----DFIVLP-NVGHCPQVSLYLSLSSACLHTLSYLHTC 248 (260)
Q Consensus 198 ~~~~~~~~~~~~~~~~~----~~~~~~-~~gH~~~~~~p~~~~~~i~~~l~~~~~~ 248 (260)
++|++..+.+++.++++ ++++++ ++||++++|+|+++++.|.+||+....+
T Consensus 322 ~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~~ 377 (379)
T PRK00175 322 LFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAARE 377 (379)
T ss_pred ccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhhc
Confidence 99999999998888876 677775 8999999999999999999999887654
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-28 Score=174.99 Aligned_cols=225 Identities=20% Similarity=0.233 Sum_probs=137.6
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHH-HHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQ-LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+.+.. ....++++++++ +..+++.++.++++++|||+||.+++.+|.++|++|++
T Consensus 23 ~L~~~~~v~~~d~~g~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~ 97 (251)
T TIGR03695 23 LLGPHFRCLAIDLPGHGSSQSPDE-----IERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQG 97 (251)
T ss_pred HhcccCeEEEEcCCCCCCCCCCCc-----cChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheee
Confidence 466899999999999999977542 246789999999 77888888888999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHh-ccCCCCcccHHHHHHHhccCCcc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++++++.+.......... ...........+. .............. .+.............+.......
T Consensus 98 lil~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (251)
T TIGR03695 98 LILESGSPGLATEEERAA----------RRQNDEQLAQRFE-QEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLAN 166 (251)
T ss_pred eEEecCCCCcCchHhhhh----------hhhcchhhhhHHH-hcCccHHHHHHhcCceeeecccCChHHhHHHHHhcccc
Confidence 999998643211000000 0000000000000 00000000100000 00110011111111111111111
Q ss_pred ch--HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 160 GA--ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 160 ~~--~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
.. ...................+.++++|+++++|++|..++ +..+.+.+..+++++++++++||++++++|+++.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~ 245 (251)
T TIGR03695 167 NPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKI 245 (251)
T ss_pred cchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHH
Confidence 11 111111111111112234467889999999999998764 556677888899999999999999999999999999
Q ss_pred HHHhhh
Q 024971 238 CLHTLS 243 (260)
Q Consensus 238 i~~~l~ 243 (260)
|.+|++
T Consensus 246 i~~~l~ 251 (251)
T TIGR03695 246 LLAFLE 251 (251)
T ss_pred HHHHhC
Confidence 999974
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=182.50 Aligned_cols=247 Identities=17% Similarity=0.173 Sum_probs=135.4
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+... .. ......+.+++++.++++.++.++++++||||||.+++.+|.++|++|+++
T Consensus 127 ~L~~~~~vi~~D~rG~G~S~~~~~~-~~-~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~l 204 (402)
T PLN02894 127 ALASRFRVIAIDQLGWGGSSRPDFT-CK-STEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHL 204 (402)
T ss_pred HHHhCCEEEEECCCCCCCCCCCCcc-cc-cHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEE
Confidence 3667899999999999999765410 00 001112245677888888888899999999999999999999999999999
Q ss_pred eEeccCccccccCCCC-CCCc--c-hhHHHhh-hhhhhhhHHHHHHHhc--ChHHHHHHHHhccCC---CCcc----cHH
Q 024971 82 ILLNISLRMLHIKKQP-WYGR--P-LIRSFQN-LLRNTAAGKLFYKMVA--TSESVRNILCQCYND---TSQV----TEE 147 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~-~~~~--~-~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~----~~~ 147 (260)
|+++|........... +... . ....+.. ................ .+..........+.. .... ...
T Consensus 205 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 284 (402)
T PLN02894 205 ILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKL 284 (402)
T ss_pred EEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhH
Confidence 9999865332111100 0000 0 0000000 0000000000000000 000111111110100 0001 111
Q ss_pred HHHHHhccCCccchHHHHHHHHhh---hCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc-CCCccEEEeCCCC
Q 024971 148 LVEKILQPGLETGAADVFLEFICY---SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVG 223 (260)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~g 223 (260)
....+................... ....+....+.++++|+++|+|++|.+.+ .....+.+. .+.+++++++++|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aG 363 (402)
T PLN02894 285 LTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGG 363 (402)
T ss_pred HHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCC
Confidence 111111111111111111111110 01122234578899999999999998766 444444433 3458899999999
Q ss_pred CCcchhchhHHHHHHHHhhhhccccccc
Q 024971 224 HCPQVSLYLSLSSACLHTLSYLHTCRCY 251 (260)
Q Consensus 224 H~~~~~~p~~~~~~i~~~l~~~~~~~~~ 251 (260)
|+++.|+|++|++.+.+|++.+....+.
T Consensus 364 H~~~~E~P~~f~~~l~~~~~~~~~~~~~ 391 (402)
T PLN02894 364 HFVFLDNPSGFHSAVLYACRKYLSPDRE 391 (402)
T ss_pred CeeeccCHHHHHHHHHHHHHHhccCCch
Confidence 9999999999999999999776555543
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=180.35 Aligned_cols=218 Identities=18% Similarity=0.266 Sum_probs=133.6
Q ss_pred cEEEEEcCCCCCCCCC---CCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 7 HRVYSIDLIGYGYSDK---PNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 7 ~~v~~~D~~G~G~S~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
|+|+++|+||+|.|++ .. ...++.+++++++..++++++.++++++||||||.+++.+|.++|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPD------FPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSG------SCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCC------cccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 7999999999999995 33 36789999999999999999999999999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhH--HHhhhhhhhhhHHHHHHHhcChHHHHHH------HHhccCCCCcccHHHHHHHhcc
Q 024971 84 LNISLRMLHIKKQPWYGRPLIR--SFQNLLRNTAAGKLFYKMVATSESVRNI------LCQCYNDTSQVTEELVEKILQP 155 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
++++...... ....... .+............ ... ........ ...... ...........+...
T Consensus 75 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 145 (230)
T PF00561_consen 75 ISPPPDLPDG-----LWNRIWPRGNLQGQLLDNFFNFL-SDP--IKPLLGRWPKQFFAYDREFV-EDFLKQFQSQQYARF 145 (230)
T ss_dssp ESESSHHHHH-----HHHHCHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHT
T ss_pred Eeeeccchhh-----hhHHHHhhhhhhhhHHHhhhccc-ccc--chhhhhhhhhheeeccCccc-cchhhccchhhhhHH
Confidence 9996200000 0000000 00000000000000 000 00000000 000000 000000001111110
Q ss_pred CCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHH
Q 024971 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
.........................+.++++|+++++|++|.++|++....+.+..|+.++++++++||+.++++|++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~ 225 (230)
T PF00561_consen 146 AETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFN 225 (230)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHH
T ss_pred HHHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhh
Confidence 00000000000000011111113456679999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 024971 236 SACL 239 (260)
Q Consensus 236 ~~i~ 239 (260)
+.|.
T Consensus 226 ~~i~ 229 (230)
T PF00561_consen 226 EIII 229 (230)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 9885
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=183.52 Aligned_cols=216 Identities=15% Similarity=0.173 Sum_probs=130.5
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC------CceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
+||+|+++|+||||.|+... ....+++.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|
T Consensus 86 ~Gy~V~~~D~rGhG~S~~~~------~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v 159 (330)
T PLN02298 86 MGFACFALDLEGHGRSEGLR------AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGF 159 (330)
T ss_pred CCCEEEEecCCCCCCCCCcc------ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccc
Confidence 58999999999999997543 2346889999999999998753 36999999999999999999999999
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc--cC
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ--PG 156 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 156 (260)
+++|+++|...........+ .......... .......... ........ .... ....+.. ..
T Consensus 160 ~~lvl~~~~~~~~~~~~~~~----~~~~~~~~~~----------~~~~~~~~~~-~~~~~~~~-~~~~-~~~~~~~~~~~ 222 (330)
T PLN02298 160 DGAVLVAPMCKISDKIRPPW----PIPQILTFVA----------RFLPTLAIVP-TADLLEKS-VKVP-AKKIIAKRNPM 222 (330)
T ss_pred eeEEEecccccCCcccCCch----HHHHHHHHHH----------HHCCCCcccc-CCCccccc-ccCH-HHHHHHHhCcc
Confidence 99999998753221000000 0000000000 0000000000 00000000 0000 0000000 00
Q ss_pred -Cc-cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC--CCccEEEeCCCCCCcchhchh
Q 024971 157 -LE-TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD--SVEDFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 157 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~ 232 (260)
.. ............... .....+.++++|+|+++|++|.++|++..+.+.+.+ +++++++++++||.++.++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd 300 (330)
T PLN02298 223 RYNGKPRLGTVVELLRVTD--YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPD 300 (330)
T ss_pred ccCCCccHHHHHHHHHHHH--HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCH
Confidence 00 000111111111100 013457788999999999999999999998887664 478999999999999988876
Q ss_pred H----HHHHHHHhhhhc
Q 024971 233 S----LSSACLHTLSYL 245 (260)
Q Consensus 233 ~----~~~~i~~~l~~~ 245 (260)
. +.+.|.+|+...
T Consensus 301 ~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 301 ENIEIVRRDILSWLNER 317 (330)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 4 666777787654
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=174.65 Aligned_cols=221 Identities=14% Similarity=0.198 Sum_probs=134.1
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEec
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 85 (260)
||+|+++|+||||.|..+... ...++++++++++.+++++++.++++++||||||.+++.+|.++|++++++|+++
T Consensus 53 g~~vi~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (288)
T TIGR01250 53 GREVIMYDQLGCGYSDQPDDS----DELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISS 128 (288)
T ss_pred CCEEEEEcCCCCCCCCCCCcc----cccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEec
Confidence 899999999999999865421 0147899999999999999999999999999999999999999999999999998
Q ss_pred cCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHh----cChHHHHHHHHhcc---CCCCcccHHHHHHHhccCCc
Q 024971 86 ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV----ATSESVRNILCQCY---NDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 158 (260)
+....... ... .......+... ....+.... .........+.... ..................
T Consensus 129 ~~~~~~~~------~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 198 (288)
T TIGR01250 129 MLDSAPEY------VKE-LNRLRKELPPE-VRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGM-- 198 (288)
T ss_pred ccccchHH------HHH-HHHHHhhcChh-HHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhcc--
Confidence 75422100 000 00000000000 000000000 00000000000000 000000011111110000
Q ss_pred cchHHHHHHHH--------hhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhc
Q 024971 159 TGAADVFLEFI--------CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSL 230 (260)
Q Consensus 159 ~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 230 (260)
....+..+. ......+..+.++++++|+++++|++|.+ +++..+.+.+..+++++++++++||+++.++
T Consensus 199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 275 (288)
T TIGR01250 199 --NTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIED 275 (288)
T ss_pred --CHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCC
Confidence 000000000 00001112345678899999999999985 5677788888889999999999999999999
Q ss_pred hhHHHHHHHHhhh
Q 024971 231 YLSLSSACLHTLS 243 (260)
Q Consensus 231 p~~~~~~i~~~l~ 243 (260)
|+++.+.|.+|++
T Consensus 276 p~~~~~~i~~fl~ 288 (288)
T TIGR01250 276 PEVYFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999974
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=179.01 Aligned_cols=212 Identities=15% Similarity=0.182 Sum_probs=127.5
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.||+|+++|+||||.|+... ....++.++++|+.+.++.+ ...+++++||||||.+|+.+|.++|+++++
T Consensus 51 ~g~~via~D~~G~G~S~~~~------~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~ 124 (276)
T PHA02857 51 LGILVFSHDHIGHGRSNGEK------MMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTA 124 (276)
T ss_pred CCCEEEEccCCCCCCCCCcc------CCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccce
Confidence 48999999999999997643 13346777778887777654 345899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc-
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET- 159 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (260)
+|+++|..... .......+..... ................. .....+............
T Consensus 125 lil~~p~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 184 (276)
T PHA02857 125 MILMSPLVNAE--------AVPRLNLLAAKLM---------GIFYPNKIVGKLCPESV---SRDMDEVYKYQYDPLVNHE 184 (276)
T ss_pred EEEeccccccc--------cccHHHHHHHHHH---------HHhCCCCccCCCCHhhc---cCCHHHHHHHhcCCCccCC
Confidence 99999864310 0000010000000 00000000000000000 000001111111110000
Q ss_pred -chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC-CCccEEEeCCCCCCcchhch---hHH
Q 024971 160 -GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-SVEDFIVLPNVGHCPQVSLY---LSL 234 (260)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p---~~~ 234 (260)
............. ......+.++++|+|+++|++|.++|++..+.+.+.. +++++++++++||.++.|++ +++
T Consensus 185 ~~~~~~~~~~~~~~--~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~ 262 (276)
T PHA02857 185 KIKAGFASQVLKAT--NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSV 262 (276)
T ss_pred CccHHHHHHHHHHH--HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHH
Confidence 0111111111110 0113457789999999999999999999999887764 56899999999999998866 467
Q ss_pred HHHHHHhhhh
Q 024971 235 SSACLHTLSY 244 (260)
Q Consensus 235 ~~~i~~~l~~ 244 (260)
.+.+.+||+.
T Consensus 263 ~~~~~~~l~~ 272 (276)
T PHA02857 263 MKEIETWIFN 272 (276)
T ss_pred HHHHHHHHHH
Confidence 7777778765
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=184.28 Aligned_cols=231 Identities=11% Similarity=0.034 Sum_probs=131.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
++||+|+++|+||||.|+.+..... .....+++++++|+..+++++ +..+++++||||||.+++.++.++|++++
T Consensus 79 ~~g~~v~~~D~~G~G~S~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~ 157 (330)
T PRK10749 79 HLGYDVLIIDHRGQGRSGRLLDDPH-RGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFD 157 (330)
T ss_pred HCCCeEEEEcCCCCCCCCCCCCCCC-cCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcc
Confidence 5799999999999999986432100 012358999999999999887 56789999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhh-hHHHHHHHhcChHHHH-HHHHhccCCCCcccHHHHHHHhccCC
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA-AGKLFYKMVATSESVR-NILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
++|+++|....... ........+........ .... .. ........ ..................+.+.....
T Consensus 158 ~lvl~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 230 (330)
T PRK10749 158 AIALCAPMFGIVLP-----LPSWMARRILNWAEGHPRIRDG-YA-IGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPE 230 (330)
T ss_pred eEEEECchhccCCC-----CCcHHHHHHHHHHHHhcCCCCc-CC-CCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 99999986432100 00000000000000000 0000 00 00000000 00000000000000111122221110
Q ss_pred c---cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC-------CCccEEEeCCCCCCcc
Q 024971 158 E---TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-------SVEDFIVLPNVGHCPQ 227 (260)
Q Consensus 158 ~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~ 227 (260)
. .............. ......+.++++|+|+|+|++|.+++++..+.+.+.+ +++++++++|+||.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~ 308 (330)
T PRK10749 231 LRVGGPTYHWVRESILAG--EQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEIL 308 (330)
T ss_pred cccCCCcHHHHHHHHHHH--HHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhh
Confidence 0 00111111111100 0012346778999999999999999998888776643 4568999999999999
Q ss_pred hhch---hHHHHHHHHhhhh
Q 024971 228 VSLY---LSLSSACLHTLSY 244 (260)
Q Consensus 228 ~~~p---~~~~~~i~~~l~~ 244 (260)
.|.+ +.+.+.|.+|++.
T Consensus 309 ~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 309 FEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred hCCcHHHHHHHHHHHHHHhh
Confidence 8875 5677778888764
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-27 Score=178.41 Aligned_cols=213 Identities=23% Similarity=0.293 Sum_probs=135.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|.++|+|+++|+||||.|.... ...+++++++++.++++.++.++++++|||+||.+++.+|.++|+++.++
T Consensus 153 ~l~~~~~v~~~d~~g~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~l 225 (371)
T PRK14875 153 ALAAGRPVIALDLPGHGASSKAV-------GAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASL 225 (371)
T ss_pred HHhcCCEEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEE
Confidence 36678999999999999996544 35789999999999999999899999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++........ ..+...+..... ...+...+...+.............+.........
T Consensus 226 v~~~~~~~~~~~~------~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (371)
T PRK14875 226 TLIAPAGLGPEIN------GDYIDGFVAAES--------------RRELKPVLELLFADPALVTRQMVEDLLKYKRLDGV 285 (371)
T ss_pred EEECcCCcCcccc------hhHHHHhhcccc--------------hhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccH
Confidence 9998764221100 000000000000 00011111111111111111111111111110000
Q ss_pred HHHHHHHHhhh-----CCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHH
Q 024971 162 ADVFLEFICYS-----GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 162 ~~~~~~~~~~~-----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
...+....... ........+.++++|+++++|++|.++|.+..+.+. ++.++.+++++||++++++|+++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~---~~~~~~~~~~~gH~~~~e~p~~~~~ 362 (371)
T PRK14875 286 DDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP---DGVAVHVLPGAGHMPQMEAAADVNR 362 (371)
T ss_pred HHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc---CCCeEEEeCCCCCChhhhCHHHHHH
Confidence 11111111100 001112346678999999999999999987765543 4578999999999999999999999
Q ss_pred HHHHhhhh
Q 024971 237 ACLHTLSY 244 (260)
Q Consensus 237 ~i~~~l~~ 244 (260)
.|.+|++.
T Consensus 363 ~i~~fl~~ 370 (371)
T PRK14875 363 LLAEFLGK 370 (371)
T ss_pred HHHHHhcc
Confidence 99999864
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=167.45 Aligned_cols=218 Identities=17% Similarity=0.117 Sum_probs=130.4
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
+||+|+++|+||||.|.... ...++++++++++.+++++++ .++++++||||||.++..++.++|++|+++|+
T Consensus 44 ~g~~vi~~dl~g~G~s~~~~------~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~ 117 (273)
T PLN02211 44 SGYKVTCIDLKSAGIDQSDA------DSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVY 117 (273)
T ss_pred CCCEEEEecccCCCCCCCCc------ccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEE
Confidence 58999999999999886543 234799999999999999985 57999999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC-CCCcccHHHHHHHhccCCccchH
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN-DTSQVTEELVEKILQPGLETGAA 162 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
+++......... ......... .... ........ .. ...... .......+....+..........
T Consensus 118 ~~~~~~~~g~~~--------~~~~~~~~~--~~~~-~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (273)
T PLN02211 118 VAATMLKLGFQT--------DEDMKDGVP--DLSE-FGDVYELG--FG--LGPDQPPTSAIIKKEFRRKILYQMSPQEDS 182 (273)
T ss_pred eccccCCCCCCH--------HHHHhcccc--chhh-hccceeee--ec--cCCCCCCceeeeCHHHHHHHHhcCCCHHHH
Confidence 987532110000 000000000 0000 00000000 00 000000 00000011111110000000000
Q ss_pred HHHHHHH-----hhhCCCCCCccCCCC-CCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHH
Q 024971 163 DVFLEFI-----CYSGGPLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 163 ~~~~~~~-----~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
....... .........+...++ ++|+++|.|++|..+|++.++.+.+..+..+++.++ +||.+++++|+++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~ 261 (273)
T PLN02211 183 TLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFG 261 (273)
T ss_pred HHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHH
Confidence 0000000 000001111223344 799999999999999999999999998888999997 899999999999999
Q ss_pred HHHHhhhh
Q 024971 237 ACLHTLSY 244 (260)
Q Consensus 237 ~i~~~l~~ 244 (260)
.|.++...
T Consensus 262 ~i~~~a~~ 269 (273)
T PLN02211 262 LLIKAAAS 269 (273)
T ss_pred HHHHHHHH
Confidence 99887654
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-26 Score=166.17 Aligned_cols=222 Identities=19% Similarity=0.184 Sum_probs=136.2
Q ss_pred CCccEEEEEcCCCCCCCCC-CCCCCCCCCCCccHHHHHHHHHHHHHhhc----CCceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYSDK-PNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+||.|+++|+||||.|.. .. ....++.++.+|+..+++... ..+++++||||||.+++.++.+++..|
T Consensus 59 ~~G~~V~~~D~RGhG~S~r~~r------g~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i 132 (298)
T COG2267 59 ARGFDVYALDLRGHGRSPRGQR------GHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRI 132 (298)
T ss_pred hCCCEEEEecCCCCCCCCCCCc------CCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccc
Confidence 5799999999999999984 32 345569999999999999885 358999999999999999999999999
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC-
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL- 157 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 157 (260)
+++|+.+|...... ................+......... . . ..........-+++..+.+.....
T Consensus 133 ~~~vLssP~~~l~~---------~~~~~~~~~~~~~~~~~~~p~~~~~~-~-~--~~~~~~~~~sr~~~~~~~~~~dP~~ 199 (298)
T COG2267 133 DGLVLSSPALGLGG---------AILRLILARLALKLLGRIRPKLPVDS-N-L--LEGVLTDDLSRDPAEVAAYEADPLI 199 (298)
T ss_pred cEEEEECccccCCh---------hHHHHHHHHHhcccccccccccccCc-c-c--ccCcCcchhhcCHHHHHHHhcCCcc
Confidence 99999999864421 00000000000000000000000000 0 0 000011111223344444443332
Q ss_pred cc--chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCC-hHHHHHhhcc--CCCccEEEeCCCCCCcchhc-h
Q 024971 158 ET--GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP-IELGRAYGNF--DSVEDFIVLPNVGHCPQVSL-Y 231 (260)
Q Consensus 158 ~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~-~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~-p 231 (260)
.. .....+........ .........+++|+|+++|++|.+++ .+...++.+. .+++++++++|+.|.++.|. .
T Consensus 200 ~~~~~~~~w~~~~~~a~~-~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~ 278 (298)
T COG2267 200 GVGGPVSRWVDLALLAGR-VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDR 278 (298)
T ss_pred ccCCccHHHHHHHHHhhc-ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcch
Confidence 11 11222222222222 11234466789999999999999999 5666654443 67789999999999988874 4
Q ss_pred --hHHHHHHHHhhhhc
Q 024971 232 --LSLSSACLHTLSYL 245 (260)
Q Consensus 232 --~~~~~~i~~~l~~~ 245 (260)
+++.+.+.+|+...
T Consensus 279 ~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 279 AREEVLKDILAWLAEA 294 (298)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 56777777777543
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-27 Score=162.53 Aligned_cols=216 Identities=19% Similarity=0.186 Sum_probs=137.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc------CCceEEEEeChhhHHHHHHHhhCccc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
..||.|+++|++|||.|++.. ....+++..++|+.++.+... ..+.+|+||||||++++.++.+.|+.
T Consensus 80 ~~g~~v~a~D~~GhG~SdGl~------~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~ 153 (313)
T KOG1455|consen 80 KSGFAVYAIDYEGHGRSDGLH------AYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNF 153 (313)
T ss_pred hCCCeEEEeeccCCCcCCCCc------ccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcc
Confidence 469999999999999999866 356789999999999988752 23799999999999999999999999
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc-cC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ-PG 156 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 156 (260)
.+|+|+++|...........+........+..++...... ...... ....-+++....... +.
T Consensus 154 w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~v-------p~~d~~---------~~~~kdp~~r~~~~~npl 217 (313)
T KOG1455|consen 154 WDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIV-------PTKDII---------DVAFKDPEKRKILRSDPL 217 (313)
T ss_pred cccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeec-------CCcccc---------ccccCCHHHHHHhhcCCc
Confidence 9999999998765433333222222222222222211100 000000 000001111111111 11
Q ss_pred Ccc--chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc--CCCccEEEeCCCCCCcch-h--
Q 024971 157 LET--GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQV-S-- 229 (260)
Q Consensus 157 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~-- 229 (260)
... .......++.+.. .+....+.++++|.+++||++|.++.++.++.+.+. ..+.++.+|||.=|.++. |
T Consensus 218 ~y~g~pRl~T~~ElLr~~--~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~ 295 (313)
T KOG1455|consen 218 CYTGKPRLKTAYELLRVT--ADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPD 295 (313)
T ss_pred eecCCccHHHHHHHHHHH--HHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCc
Confidence 111 1122222222211 112457889999999999999999999999998876 457899999999998775 3
Q ss_pred -chhHHHHHHHHhhh
Q 024971 230 -LYLSLSSACLHTLS 243 (260)
Q Consensus 230 -~p~~~~~~i~~~l~ 243 (260)
+-+.|...|.+||+
T Consensus 296 en~e~Vf~DI~~Wl~ 310 (313)
T KOG1455|consen 296 ENVEIVFGDIISWLD 310 (313)
T ss_pred hhHHHHHHHHHHHHH
Confidence 34445555555554
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-26 Score=197.28 Aligned_cols=232 Identities=18% Similarity=0.220 Sum_probs=140.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCC-CCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+...... ......++++++++++.+++++++.++++++||||||.+++.++.++|++|++
T Consensus 1393 ~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~ 1472 (1655)
T PLN02980 1393 AISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEG 1472 (1655)
T ss_pred HHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCE
Confidence 36678999999999999997643100 00013578999999999999999999999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCC----CCcccHHHHHHHhccC
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND----TSQVTEELVEKILQPG 156 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 156 (260)
+|++++.+.... ........... ......+. ......+....+.. ................
T Consensus 1473 lVlis~~p~~~~---------~~~~~~~~~~~-~~~~~~l~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1537 (1655)
T PLN02980 1473 AVIISGSPGLKD---------EVARKIRSAKD-DSRARMLI-----DHGLEIFLENWYSGELWKSLRNHPHFNKIVASRL 1537 (1655)
T ss_pred EEEECCCCccCc---------hHHHHHHhhhh-hHHHHHHH-----hhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHH
Confidence 999987542210 00000000000 00000000 00000000000000 0000011111110000
Q ss_pred CccchHHHHHHHH---hhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC------------ccEEEeCC
Q 024971 157 LETGAADVFLEFI---CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV------------EDFIVLPN 221 (260)
Q Consensus 157 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~ 221 (260)
.. .......... ......+..+.++++++|+|+|+|++|..++ +..+.+.+.+++ ++++++++
T Consensus 1538 ~~-~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~ 1615 (1655)
T PLN02980 1538 LH-KDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPN 1615 (1655)
T ss_pred hc-CCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECC
Confidence 00 0111111111 1111222245688999999999999999775 455555555443 47999999
Q ss_pred CCCCcchhchhHHHHHHHHhhhhcccccc
Q 024971 222 VGHCPQVSLYLSLSSACLHTLSYLHTCRC 250 (260)
Q Consensus 222 ~gH~~~~~~p~~~~~~i~~~l~~~~~~~~ 250 (260)
+||++++|+|+++++.|.+|++..+.++.
T Consensus 1616 aGH~~~lE~Pe~f~~~I~~FL~~~~~~~~ 1644 (1655)
T PLN02980 1616 CGHAVHLENPLPVIRALRKFLTRLHNSST 1644 (1655)
T ss_pred CCCchHHHCHHHHHHHHHHHHHhccccCC
Confidence 99999999999999999999998876654
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=168.62 Aligned_cols=235 Identities=14% Similarity=0.088 Sum_probs=141.9
Q ss_pred CccEEEEEcCCCCCCCCCC-------CCCCC------C-CCCCccHHHHHHHHHHHHHhhcCCceE-EEEeChhhHHHHH
Q 024971 5 KSHRVYSIDLIGYGYSDKP-------NPRDF------F-DKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQ 69 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~-------~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-lvGhS~Gg~~a~~ 69 (260)
..|.||++|..|-|.|+.| ...+. . .-..++++++++++..+++++++++++ ++||||||++++.
T Consensus 98 ~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~ 177 (389)
T PRK06765 98 NKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQE 177 (389)
T ss_pred CceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHH
Confidence 5799999999998764322 11000 0 112479999999999999999999986 9999999999999
Q ss_pred HHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhh-hh---------------h--h-hHHHHHHHhcChHHH
Q 024971 70 AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLL-RN---------------T--A-AGKLFYKMVATSESV 130 (260)
Q Consensus 70 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------------~--~-~~~~~~~~~~~~~~~ 130 (260)
+|.++|++|+++|++++..... ++............+ .. . . ............+.+
T Consensus 178 ~a~~~P~~v~~lv~ia~~~~~~-----~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~ 252 (389)
T PRK06765 178 WAVHYPHMVERMIGVIGNPQND-----AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFY 252 (389)
T ss_pred HHHHChHhhheEEEEecCCCCC-----hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999998764321 010001111111100 00 0 0 011111112222222
Q ss_pred HHHHHhcc--CCC------Cccc-HHHHHHHhccCCccchHHHHHHHHhhhCCC-------CCCccCCCCCCCEEEEecC
Q 024971 131 RNILCQCY--NDT------SQVT-EELVEKILQPGLETGAADVFLEFICYSGGP-------LPEELLPQVKCPVLIAWGD 194 (260)
Q Consensus 131 ~~~~~~~~--~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~P~l~i~g~ 194 (260)
...+.... ... .... +..................+..+....... +..+.+.++++|+|+|+|+
T Consensus 253 ~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~ 332 (389)
T PRK06765 253 ETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCK 332 (389)
T ss_pred HHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeC
Confidence 22211110 000 0000 111111111111222222222222211111 2345678899999999999
Q ss_pred CCCCCChHHHHHhhccCC----CccEEEeCC-CCCCcchhchhHHHHHHHHhhhh
Q 024971 195 KDPWEPIELGRAYGNFDS----VEDFIVLPN-VGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 195 ~D~~~~~~~~~~~~~~~~----~~~~~~~~~-~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
+|.++|++..+.+.+.++ +++++++++ +||+.++++|+++++.|.+|++.
T Consensus 333 ~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 333 QDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 999999999888887765 688999985 89999999999999999999864
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-25 Score=162.70 Aligned_cols=81 Identities=20% Similarity=0.199 Sum_probs=71.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
.++|+|+++|+||||.|+.+.. ...++.+++++|+..++++++.++++++||||||.+++.++.++|++|+++|+
T Consensus 51 ~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl 125 (306)
T TIGR01249 51 PETYRIVLFDQRGCGKSTPHAC-----LEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVL 125 (306)
T ss_pred ccCCEEEEECCCCCCCCCCCCC-----cccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhhee
Confidence 3689999999999999986532 13467889999999999999999999999999999999999999999999999
Q ss_pred eccCcc
Q 024971 84 LNISLR 89 (260)
Q Consensus 84 ~~~~~~ 89 (260)
+++...
T Consensus 126 ~~~~~~ 131 (306)
T TIGR01249 126 RGIFLL 131 (306)
T ss_pred eccccC
Confidence 988643
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=176.18 Aligned_cols=220 Identities=16% Similarity=0.167 Sum_probs=130.7
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC----CceEEEEeChhhHHHHHHHhhCccc-
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEPEI- 77 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lvGhS~Gg~~a~~~a~~~p~~- 77 (260)
+++||+|+++|+||||.|....+ ......+++|+.+++++++. .+++++||||||.+++.++.++|++
T Consensus 126 ~~~g~~vv~~d~rG~G~s~~~~~-------~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~ 198 (388)
T PLN02511 126 RSKGWRVVVFNSRGCADSPVTTP-------QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENC 198 (388)
T ss_pred HHCCCEEEEEecCCCCCCCCCCc-------CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCC
Confidence 46899999999999999976442 22235667788888887754 5899999999999999999999987
Q ss_pred -hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcCh-HHHHHHHHhc---cC----CCCcccHHH
Q 024971 78 -CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATS-ESVRNILCQC---YN----DTSQVTEEL 148 (260)
Q Consensus 78 -v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~----~~~~~~~~~ 148 (260)
|.++++++++...... ...+..... ......+...+... ......+... +. .......++
T Consensus 199 ~v~~~v~is~p~~l~~~----------~~~~~~~~~-~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 267 (388)
T PLN02511 199 PLSGAVSLCNPFDLVIA----------DEDFHKGFN-NVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDF 267 (388)
T ss_pred CceEEEEECCCcCHHHH----------HHHHhccHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHH
Confidence 8888888775422100 000000000 00000000000000 0000000000 00 000011111
Q ss_pred HHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHH-HHhhccCCCccEEEeCCCCCCcc
Q 024971 149 VEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQ 227 (260)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~ 227 (260)
.+.+............+. . ..+....+++|++|+|+|+|++|+++|.+.. ....+..+++++++++++||+.+
T Consensus 268 d~~~t~~~~gf~~~~~yy---~---~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~ 341 (388)
T PLN02511 268 DDGLTRVSFGFKSVDAYY---S---NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGW 341 (388)
T ss_pred HHhhhhhcCCCCCHHHHH---H---HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceecc
Confidence 111111111111111111 1 1222457889999999999999999987754 44566789999999999999999
Q ss_pred hhchhH------HHHHHHHhhhhcc
Q 024971 228 VSLYLS------LSSACLHTLSYLH 246 (260)
Q Consensus 228 ~~~p~~------~~~~i~~~l~~~~ 246 (260)
+|+|+. +.+.+.+|++.+.
T Consensus 342 ~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 342 VAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred ccCCCCCCCCccHHHHHHHHHHHHH
Confidence 999876 4888999997654
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-26 Score=172.20 Aligned_cols=215 Identities=19% Similarity=0.204 Sum_probs=130.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC----CceEEEEeChhhHHHHHHHhhCc---c
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAVMEP---E 76 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lvGhS~Gg~~a~~~a~~~p---~ 76 (260)
++||+|+++|+||||.|+... ....+++.+++|+.++++.+.. .+++++||||||.+++.++. +| +
T Consensus 161 ~~Gy~V~~~D~rGhG~S~~~~------~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~ 233 (395)
T PLN02652 161 SCGFGVYAMDWIGHGGSDGLH------GYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIED 233 (395)
T ss_pred HCCCEEEEeCCCCCCCCCCCC------CCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCccc
Confidence 369999999999999998754 2345788999999999988753 37999999999999998764 55 4
Q ss_pred chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 77 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+++++|+.+|...... ..+....+... .........+... .................+..+.
T Consensus 234 ~v~glVL~sP~l~~~~-------~~~~~~~~~~l----------~~~~~p~~~~~~~-~~~~~~~s~~~~~~~~~~~dp~ 295 (395)
T PLN02652 234 KLEGIVLTSPALRVKP-------AHPIVGAVAPI----------FSLVAPRFQFKGA-NKRGIPVSRDPAALLAKYSDPL 295 (395)
T ss_pred ccceEEEECccccccc-------chHHHHHHHHH----------HHHhCCCCcccCc-ccccCCcCCCHHHHHHHhcCCC
Confidence 7999999988642210 00000000000 0000000000000 0000000000111111121111
Q ss_pred Cccch--HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC--CccEEEeCCCCCCcchh-ch
Q 024971 157 LETGA--ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQVS-LY 231 (260)
Q Consensus 157 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-~p 231 (260)
..... ........... ......+.++++|+|+++|++|.++|++.++.+.+..+ +.+++++++++|.++.| ++
T Consensus 296 ~~~g~i~~~~~~~~~~~~--~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~ 373 (395)
T PLN02652 296 VYTGPIRVRTGHEILRIS--SYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPER 373 (395)
T ss_pred cccCCchHHHHHHHHHHH--HHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCH
Confidence 11111 11111111110 01134577899999999999999999999988876643 47899999999998776 79
Q ss_pred hHHHHHHHHhhhhc
Q 024971 232 LSLSSACLHTLSYL 245 (260)
Q Consensus 232 ~~~~~~i~~~l~~~ 245 (260)
+++.+.+.+|++..
T Consensus 374 e~v~~~I~~FL~~~ 387 (395)
T PLN02652 374 EEVGRDIIDWMEKR 387 (395)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999743
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-26 Score=148.54 Aligned_cols=204 Identities=23% Similarity=0.261 Sum_probs=141.2
Q ss_pred cEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEecc
Q 024971 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (260)
Q Consensus 7 ~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 86 (260)
++|+++|-||+|.|.++.. ++ ...-+..-+++...+++.+..+++.++|+|-||..|+..|+++++.|.++|+.+.
T Consensus 72 ~TivawDPpGYG~SrPP~R-kf---~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga 147 (277)
T KOG2984|consen 72 VTIVAWDPPGYGTSRPPER-KF---EVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGA 147 (277)
T ss_pred eEEEEECCCCCCCCCCCcc-cc---hHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecc
Confidence 8999999999999987762 11 1223455567778899999999999999999999999999999999999999988
Q ss_pred CccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHH
Q 024971 87 SLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL 166 (260)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (260)
......... ...+.++....-....+.-+......+.+.... + ...+...
T Consensus 148 ~ayvn~~~~------ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~w---------------a---------~wvD~v~ 197 (277)
T KOG2984|consen 148 AAYVNHLGA------MAFKGIRDVNKWSARGRQPYEDHYGPETFRTQW---------------A---------AWVDVVD 197 (277)
T ss_pred cceecchhH------HHHhchHHHhhhhhhhcchHHHhcCHHHHHHHH---------------H---------HHHHHHH
Confidence 753321100 001111111111111111111111222221111 1 1123333
Q ss_pred HHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhhh
Q 024971 167 EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 167 ~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
++.........+..+.+++||+|+++|+.|++++....-.+....+.+++.+.+.++|.+++.-+++++..+.+|++.
T Consensus 198 qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 198 QFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred HHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 333333334445678999999999999999999988888888888999999999999999999999999999999975
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-25 Score=176.63 Aligned_cols=232 Identities=16% Similarity=0.141 Sum_probs=130.7
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCc-eEEEEeChhhHHHHHHHhh--Cccch
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVM--EPEIC 78 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lvGhS~Gg~~a~~~a~~--~p~~v 78 (260)
.|+++|+|+++|+||||.|+.+.. ...++++++++|+..++++++.++ ++++||||||.+++.++.+ .++++
T Consensus 47 ~L~~~~~Vi~~D~~G~G~S~~~~~-----~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v 121 (582)
T PRK05855 47 LLADRFRVVAYDVRGAGRSSAPKR-----TAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRI 121 (582)
T ss_pred HhhcceEEEEecCCCCCCCCCCCc-----ccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhh
Confidence 467899999999999999987542 246899999999999999998765 9999999999999888766 24455
Q ss_pred hhceEeccCccccccCC-CCC----CCcchhHHHhhhhhhhhh--------HHHHHHHhcChHHHHHHHHhccCCCCccc
Q 024971 79 RGMILLNISLRMLHIKK-QPW----YGRPLIRSFQNLLRNTAA--------GKLFYKMVATSESVRNILCQCYNDTSQVT 145 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (260)
..++.++++........ ... .................. ........ ............ . .....
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~ 198 (582)
T PRK05855 122 ASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLG-LGRAWPRLLRRV-E-GTPVD 198 (582)
T ss_pred hhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccc-hhhHHHHhhhhc-c-CCCcc
Confidence 55555543321000000 000 000000000000000000 00000000 000000000000 0 00000
Q ss_pred HHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCC
Q 024971 146 EELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC 225 (260)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 225 (260)
........ .. .......+... .........+..+++|+++|+|++|.+++.+..+.+.+..++.++++++ +||+
T Consensus 199 ~~~~~~~~-~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~ 272 (582)
T PRK05855 199 PIPTQTTL-SD-GAHGVKLYRAN---MIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHW 272 (582)
T ss_pred hhhhhhhh-cc-ccchHHHHHhh---hhhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCc
Confidence 00000000 00 00001111110 0001112235568999999999999999999988888888888888887 6999
Q ss_pred cchhchhHHHHHHHHhhhhccc
Q 024971 226 PQVSLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 226 ~~~~~p~~~~~~i~~~l~~~~~ 247 (260)
++.|+|+++.+.|.+|++....
T Consensus 273 ~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 273 LPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred chhhChhHHHHHHHHHHHhccC
Confidence 9999999999999999987654
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-24 Score=150.18 Aligned_cols=218 Identities=17% Similarity=0.112 Sum_probs=140.1
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc----CCceEEEEeChhh-HHHHHHHhhCccchhh
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGG-LVGLQAAVMEPEICRG 80 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lvGhS~Gg-~~a~~~a~~~p~~v~~ 80 (260)
+..|+++|.|.||.|.... ..+.+++++|+..+++..+ ..+++++|||||| .+++..+...|+.+..
T Consensus 80 ~~~v~~vd~RnHG~Sp~~~--------~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~r 151 (315)
T KOG2382|consen 80 GRDVYAVDVRNHGSSPKIT--------VHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIER 151 (315)
T ss_pred cCceEEEecccCCCCcccc--------ccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccce
Confidence 4589999999999998754 5679999999999999985 5689999999999 7788888889999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhh------HHHHH---HHhcChHHHHHHHHhccCCCCcccHHHHHH
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA------GKLFY---KMVATSESVRNILCQCYNDTSQVTEELVEK 151 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
+|+++-.+... +.........+..+...... ..... ........+..++...+.. ....
T Consensus 152 liv~D~sP~~~-----~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~-~~~~------ 219 (315)
T KOG2382|consen 152 LIVEDISPGGV-----GRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKK-SPSD------ 219 (315)
T ss_pred eEEEecCCccC-----CcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCc-CCCC------
Confidence 99998776311 11111111111111111000 00000 0111222222222222221 0000
Q ss_pred HhccCCccchHHHHHHHHhhhCCCCCCccC--CCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchh
Q 024971 152 ILQPGLETGAADVFLEFICYSGGPLPEELL--PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229 (260)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 229 (260)
.............+++...........+ ...+.||+++.|.++..++.+...++.+..|++++++++++|||++.|
T Consensus 220 --~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E 297 (315)
T KOG2382|consen 220 --GSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLE 297 (315)
T ss_pred --CceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecC
Confidence 0001111223333333221111112222 667899999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHhhhhc
Q 024971 230 LYLSLSSACLHTLSYL 245 (260)
Q Consensus 230 ~p~~~~~~i~~~l~~~ 245 (260)
+|+++.+.|.+|++..
T Consensus 298 ~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 298 KPEEFIESISEFLEEP 313 (315)
T ss_pred CHHHHHHHHHHHhccc
Confidence 9999999999988653
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-24 Score=159.18 Aligned_cols=219 Identities=14% Similarity=0.142 Sum_probs=127.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc------------------------CCceEEEE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV------------------------KDQAFFIC 59 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~lvG 59 (260)
.+||+|+++|+||||.|....... ....+++++++|+..+++.+. ..|++++|
T Consensus 72 ~~G~~V~~~D~rGHG~S~~~~~~~---g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~G 148 (332)
T TIGR01607 72 KNGYSVYGLDLQGHGESDGLQNLR---GHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIG 148 (332)
T ss_pred HCCCcEEEecccccCCCccccccc---cchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEee
Confidence 579999999999999998643100 123589999999999887642 24799999
Q ss_pred eChhhHHHHHHHhhCcc--------chhhceEeccCccccccCCCC-CCCcchhHHHhhhhhhhhhHHHHHHHhcChHHH
Q 024971 60 NSIGGLVGLQAAVMEPE--------ICRGMILLNISLRMLHIKKQP-WYGRPLIRSFQNLLRNTAAGKLFYKMVATSESV 130 (260)
Q Consensus 60 hS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (260)
|||||.+++.++.++++ .++++|+++|+.......... .........+...+ .. +..... .
T Consensus 149 hSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~-----~~-~~p~~~----~ 218 (332)
T TIGR01607 149 LSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFM-----SR-VFPTFR----I 218 (332)
T ss_pred ccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHH-----HH-HCCccc----c
Confidence 99999999999876542 589999999875331100000 00000000000000 00 000000 0
Q ss_pred HHHHHhccCCCCcccHHHHHHHhccCCc---cchHHHHHHHHhhhCCCCCCccCCCC--CCCEEEEecCCCCCCChHHHH
Q 024971 131 RNILCQCYNDTSQVTEELVEKILQPGLE---TGAADVFLEFICYSGGPLPEELLPQV--KCPVLIAWGDKDPWEPIELGR 205 (260)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~ 205 (260)
.. . ......+...+.+...... ......+..+....... ...+.++ ++|+|+++|++|.+++++..+
T Consensus 219 ~~---~---~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~--~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~ 290 (332)
T TIGR01607 219 SK---K---IRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDTL--DCDIDYIPKDIPILFIHSKGDCVCSYEGTV 290 (332)
T ss_pred cC---c---cccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHHH--HhhHhhCCCCCCEEEEEeCCCCccCHHHHH
Confidence 00 0 0000011111221111111 11122222222221100 1123344 799999999999999999888
Q ss_pred Hhhcc--CCCccEEEeCCCCCCcchhc-hhHHHHHHHHhhh
Q 024971 206 AYGNF--DSVEDFIVLPNVGHCPQVSL-YLSLSSACLHTLS 243 (260)
Q Consensus 206 ~~~~~--~~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~~l~ 243 (260)
.+.+. .++.+++++++++|.++.|. ++++.+.|.+||+
T Consensus 291 ~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 291 SFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 87654 35788999999999998874 7889999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-23 Score=138.26 Aligned_cols=195 Identities=17% Similarity=0.197 Sum_probs=129.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.+||.|++|.+||||...... -..+.++|.+++.+..+++ +.+.+.++|.||||.+++.+|..+| +++
T Consensus 40 e~GyTv~aP~ypGHG~~~e~f-------l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~ 110 (243)
T COG1647 40 ENGYTVYAPRYPGHGTLPEDF-------LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKK 110 (243)
T ss_pred HCCceEecCCCCCCCCCHHHH-------hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccc
Confidence 369999999999999876433 3457778887777665555 6789999999999999999999999 899
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC--c
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL--E 158 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 158 (260)
+|.++++..... ....+..+.....+ ... ....+.+.....+.... .
T Consensus 111 iv~m~a~~~~k~-------~~~iie~~l~y~~~--------------------~kk----~e~k~~e~~~~e~~~~~~~~ 159 (243)
T COG1647 111 IVPMCAPVNVKS-------WRIIIEGLLEYFRN--------------------AKK----YEGKDQEQIDKEMKSYKDTP 159 (243)
T ss_pred eeeecCCccccc-------chhhhHHHHHHHHH--------------------hhh----ccCCCHHHHHHHHHHhhcch
Confidence 999998754311 01111111111100 000 00111111111111111 1
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc--CCCccEEEeCCCCCCcchh-chhHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQVS-LYLSLS 235 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~-~p~~~~ 235 (260)
......+..+.... ...+..|..|+++++|++|.++|.+.+..+.+. ....++.+++++||.+..+ ..+.+.
T Consensus 160 ~~~~~~~~~~i~~~-----~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~ 234 (243)
T COG1647 160 MTTTAQLKKLIKDA-----RRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVE 234 (243)
T ss_pred HHHHHHHHHHHHHH-----HhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHH
Confidence 11222222222222 456788999999999999999999999887776 3457899999999976655 688899
Q ss_pred HHHHHhhh
Q 024971 236 SACLHTLS 243 (260)
Q Consensus 236 ~~i~~~l~ 243 (260)
+.+..||+
T Consensus 235 e~V~~FL~ 242 (243)
T COG1647 235 EDVITFLE 242 (243)
T ss_pred HHHHHHhh
Confidence 99999986
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=154.37 Aligned_cols=188 Identities=17% Similarity=0.184 Sum_probs=120.7
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
++||.|+++|+||+|.|.... ...+......++.+.+... +.+++.++||||||.+++.+|..+|++|++
T Consensus 220 ~~Gy~vl~~D~pG~G~s~~~~-------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a 292 (414)
T PRK05077 220 PRGIAMLTIDMPSVGFSSKWK-------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKA 292 (414)
T ss_pred hCCCEEEEECCCCCCCCCCCC-------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceE
Confidence 568999999999999996532 1223444455666666554 457899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|+++++.... ... ...... .+......+...+.... ...+.....+..
T Consensus 293 ~V~~~~~~~~~-------~~~--~~~~~~----------------~p~~~~~~la~~lg~~~-~~~~~l~~~l~~----- 341 (414)
T PRK05077 293 VACLGPVVHTL-------LTD--PKRQQQ----------------VPEMYLDVLASRLGMHD-ASDEALRVELNR----- 341 (414)
T ss_pred EEEECCccchh-------hcc--hhhhhh----------------chHHHHHHHHHHhCCCC-CChHHHHHHhhh-----
Confidence 99999874210 000 000000 00000000101011000 011111111000
Q ss_pred hHHHHHHHHhhhCCCCCCccC-CCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELL-PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~-~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
+. ... ...+ .++++|+|+|+|++|.++|.+..+.+.+..++.++++++++ ++.+.++++.+.+.
T Consensus 342 ----------~s-l~~-~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~ 406 (414)
T PRK05077 342 ----------YS-LKV-QGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEIS 406 (414)
T ss_pred ----------cc-chh-hhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHH
Confidence 00 000 1111 56899999999999999999999998888999999999985 55678999999999
Q ss_pred Hhhhh
Q 024971 240 HTLSY 244 (260)
Q Consensus 240 ~~l~~ 244 (260)
+||+.
T Consensus 407 ~wL~~ 411 (414)
T PRK05077 407 DWLED 411 (414)
T ss_pred HHHHH
Confidence 99864
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.9e-23 Score=149.80 Aligned_cols=197 Identities=14% Similarity=0.085 Sum_probs=116.9
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-----cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+||+|+++|+||||.|.... .+++++.+|+.++++.+ +.++++++||||||.+++.+|.. +++|+
T Consensus 56 ~G~~v~~~Dl~G~G~S~~~~---------~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~ 125 (274)
T TIGR03100 56 AGFPVLRFDYRGMGDSEGEN---------LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVA 125 (274)
T ss_pred CCCEEEEeCCCCCCCCCCCC---------CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCcc
Confidence 58999999999999987532 36677788888887776 45679999999999999999765 46799
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc-----
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ----- 154 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 154 (260)
++|+++|...... ... ...+.. .+.........+... +...... .+....+..
T Consensus 126 ~lil~~p~~~~~~-----~~~---~~~~~~---------~~~~~~~~~~~~~~~----~~g~~~~-~~~~~~~~~~~~~~ 183 (274)
T TIGR03100 126 GLVLLNPWVRTEA-----AQA---ASRIRH---------YYLGQLLSADFWRKL----LSGEVNL-GSSLRGLGDALLKA 183 (274)
T ss_pred EEEEECCccCCcc-----cch---HHHHHH---------HHHHHHhChHHHHHh----cCCCccH-HHHHHHHHHHHHhh
Confidence 9999998632110 000 000100 011111111111111 1000000 000011100
Q ss_pred --cCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHH------HHhhccC--CCccEEEeCCCCC
Q 024971 155 --PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG------RAYGNFD--SVEDFIVLPNVGH 224 (260)
Q Consensus 155 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~------~~~~~~~--~~~~~~~~~~~gH 224 (260)
............. ....+.++++|+++++|++|...+ ... ..+.+.. ++++++.+++++|
T Consensus 184 ~~~~~~~~~~~~~~~---------~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H 253 (274)
T TIGR03100 184 RQKGDEVAHGGLAER---------MKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADH 253 (274)
T ss_pred hhcCCCcccchHHHH---------HHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCc
Confidence 0000000000000 023455678999999999998753 322 3344433 7899999999999
Q ss_pred Ccchh-chhHHHHHHHHhhh
Q 024971 225 CPQVS-LYLSLSSACLHTLS 243 (260)
Q Consensus 225 ~~~~~-~p~~~~~~i~~~l~ 243 (260)
++..+ .++++.+.|.+||+
T Consensus 254 ~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 254 TFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred ccccHHHHHHHHHHHHHHHh
Confidence 98544 56999999999985
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.7e-22 Score=153.01 Aligned_cols=221 Identities=12% Similarity=0.026 Sum_probs=130.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHH----HHHhhC-ccch
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGL----QAAVME-PEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~----~~a~~~-p~~v 78 (260)
++||+|+++|++|+|.|..... ...|..+.+.+.+..+++.++.++++++||||||.++. .+++.+ +++|
T Consensus 218 ~qGf~V~~iDwrgpg~s~~~~~-----~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv 292 (532)
T TIGR01838 218 EQGHTVFVISWRNPDASQADKT-----FDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRI 292 (532)
T ss_pred HCCcEEEEEECCCCCcccccCC-----hhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCcc
Confidence 5799999999999998865432 13455556667777888888899999999999999852 245555 7889
Q ss_pred hhceEeccCccccccCCCCCCC-cchhHHHhhhhhh------hhhHHHHHHHhcChHH-HHHHHHhccCCCCcccHHHHH
Q 024971 79 RGMILLNISLRMLHIKKQPWYG-RPLIRSFQNLLRN------TAAGKLFYKMVATSES-VRNILCQCYNDTSQVTEELVE 150 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 150 (260)
++++++++...+........+. ......+...... ..+.. .+........ ....+........... +..
T Consensus 293 ~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~-~F~~lrp~~l~w~~~v~~yl~g~~~~~--fdl 369 (532)
T TIGR01838 293 KSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAV-TFSLLRENDLIWNYYVDNYLKGKSPVP--FDL 369 (532)
T ss_pred ceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHH-HHHhcChhhHHHHHHHHHHhcCCCccc--hhH
Confidence 9999999987654321111111 1111111111111 01111 1122222221 2223332222222221 111
Q ss_pred HHhccCCccchHHHHHHH----HhhhC-------CCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEe
Q 024971 151 KILQPGLETGAADVFLEF----ICYSG-------GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVL 219 (260)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
.++......-....+..+ +.... .......+++|++|++++.|++|.++|.+....+.+.+++.+..++
T Consensus 370 l~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL 449 (532)
T TIGR01838 370 LFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVL 449 (532)
T ss_pred HHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEE
Confidence 112211111122222222 21111 0112356888999999999999999999999988888888889999
Q ss_pred CCCCCCcchhchh
Q 024971 220 PNVGHCPQVSLYL 232 (260)
Q Consensus 220 ~~~gH~~~~~~p~ 232 (260)
+++||.+++++|.
T Consensus 450 ~~sGHi~~ienPp 462 (532)
T TIGR01838 450 GESGHIAGVVNPP 462 (532)
T ss_pred CCCCCchHhhCCC
Confidence 9999999988764
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-21 Score=144.76 Aligned_cols=236 Identities=14% Similarity=0.144 Sum_probs=137.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCC--CCCccHHHHH-HHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCcc-
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFD--KPFYTFETWA-SQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPE- 76 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~- 76 (260)
.+||+|+++|+||+|.|.+........ -..+++++++ .|+.++++++ ..++++++||||||.+++.++ .+|+
T Consensus 105 ~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~ 183 (395)
T PLN02872 105 DHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNV 183 (395)
T ss_pred hCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHH
Confidence 359999999999998764322110000 1257888998 7999999887 347899999999999998555 5776
Q ss_pred --chhhceEeccCccccccCCCCCCCcchhHHHhh-----h---h------hhhhhHHHHHHHhcChH-HHHHHHHhccC
Q 024971 77 --ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN-----L---L------RNTAAGKLFYKMVATSE-SVRNILCQCYN 139 (260)
Q Consensus 77 --~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 139 (260)
+|+.+++++|........ .+....+.. . + ........+....+... .....+....+
T Consensus 184 ~~~v~~~~~l~P~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g 257 (395)
T PLN02872 184 VEMVEAAALLCPISYLDHVT------APLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITG 257 (395)
T ss_pred HHHHHHHHHhcchhhhccCC------CHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhC
Confidence 688999999876432111 111100000 0 0 00001111111111110 01111111111
Q ss_pred CCCcccHHHHHHHhccCCccchHHHHHHH--------------------HhhhCCCCCCccCCCC--CCCEEEEecCCCC
Q 024971 140 DTSQVTEELVEKILQPGLETGAADVFLEF--------------------ICYSGGPLPEELLPQV--KCPVLIAWGDKDP 197 (260)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~ 197 (260)
............+............+..+ ..+.....+...++++ ++|+++++|++|.
T Consensus 258 ~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~ 337 (395)
T PLN02872 258 TNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDG 337 (395)
T ss_pred CCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCC
Confidence 11222333333333222222222222221 1222223334456777 5899999999999
Q ss_pred CCChHHHHHhhccCCC-ccEEEeCCCCCC---cchhchhHHHHHHHHhhhhcc
Q 024971 198 WEPIELGRAYGNFDSV-EDFIVLPNVGHC---PQVSLYLSLSSACLHTLSYLH 246 (260)
Q Consensus 198 ~~~~~~~~~~~~~~~~-~~~~~~~~~gH~---~~~~~p~~~~~~i~~~l~~~~ 246 (260)
+++++..+.+.+.+++ .+++.++++||. ...+.|+++.+.|.+|++...
T Consensus 338 lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 338 LADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred CCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 9999998888888776 578889999995 345889999999999997543
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-22 Score=148.72 Aligned_cols=219 Identities=12% Similarity=0.031 Sum_probs=119.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccc--hhhc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI--CRGM 81 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~l 81 (260)
.+||+|+++|+||||.+....+... .....++....+..+.++++..+++++||||||.+++.++.++++. +.++
T Consensus 85 ~~G~~v~~~d~rG~g~~~~~~~~~~---~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~ 161 (324)
T PRK10985 85 KRGWLGVVMHFRGCSGEPNRLHRIY---HSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAA 161 (324)
T ss_pred HCCCEEEEEeCCCCCCCccCCcceE---CCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEE
Confidence 4699999999999998754321100 1112344333333344445667899999999999988888877544 8899
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHH----------HHHH
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEE----------LVEK 151 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 151 (260)
|+++++...... ...+..... ......+..... ............. ...+.+ +.+.
T Consensus 162 v~i~~p~~~~~~----------~~~~~~~~~-~~~~~~l~~~l~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~fd~~ 227 (324)
T PRK10985 162 VIVSAPLMLEAC----------SYRMEQGFS-RVYQRYLLNLLK--ANAARKLAAYPGT-LPINLAQLKSVRRLREFDDL 227 (324)
T ss_pred EEEcCCCCHHHH----------HHHHhhhHH-HHHHHHHHHHHH--HHHHHHHHhcccc-ccCCHHHHhcCCcHHHHhhh
Confidence 999987532110 000000000 000000000000 0011111111110 011111 1111
Q ss_pred HhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhch
Q 024971 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLY 231 (260)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 231 (260)
+............ ++. .......++++++|+++|+|++|++++.+....+.+..++.++++++++||+.+++..
T Consensus 228 ~~~~~~g~~~~~~---~y~---~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~ 301 (324)
T PRK10985 228 ITARIHGFADAID---YYR---QCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGT 301 (324)
T ss_pred heeccCCCCCHHH---HHH---HCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCC
Confidence 1111111111111 111 1112456788999999999999999998887777777888999999999999998742
Q ss_pred -----hHHHHHHHHhhhhc
Q 024971 232 -----LSLSSACLHTLSYL 245 (260)
Q Consensus 232 -----~~~~~~i~~~l~~~ 245 (260)
.-..+.+.+|++..
T Consensus 302 ~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 302 LLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCCCccHHHHHHHHHHHh
Confidence 23456666776543
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.6e-21 Score=144.08 Aligned_cols=227 Identities=19% Similarity=0.198 Sum_probs=122.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHH-H----HHHHHhhcCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQ-L----NDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+||+|+++|++|+|.|+.. .++++++.+ + ..+.+..+.++++++||||||.+++.+++.+|++|
T Consensus 92 ~~G~~V~~~D~~g~g~s~~~----------~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v 161 (350)
T TIGR01836 92 ERGQDVYLIDWGYPDRADRY----------LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKI 161 (350)
T ss_pred HCCCeEEEEeCCCCCHHHhc----------CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchhe
Confidence 46999999999999987542 356666533 3 34445557789999999999999999999999999
Q ss_pred hhceEeccCccccccCCCCCC-Ccch-hHHHhhhhhhhh--hHHHHHHHhcC-hHHHHHHHHhccCCCCcccHHHHHHHh
Q 024971 79 RGMILLNISLRMLHIKKQPWY-GRPL-IRSFQNLLRNTA--AGKLFYKMVAT-SESVRNILCQCYNDTSQVTEELVEKIL 153 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (260)
+++|+++++............ .... ...........+ .....+..... ............. ...++....+.
T Consensus 162 ~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~---~~~~~~~~~~~ 238 (350)
T TIGR01836 162 KNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDI---LEDERKVENFL 238 (350)
T ss_pred eeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHh---cCChHHHHHHH
Confidence 999999988754321110000 0000 000000000000 00000000000 0000000000000 00011111110
Q ss_pred -----ccCCccchHHHHHHHHhh----hC---C----CCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC--cc
Q 024971 154 -----QPGLETGAADVFLEFICY----SG---G----PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV--ED 215 (260)
Q Consensus 154 -----~~~~~~~~~~~~~~~~~~----~~---~----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~ 215 (260)
...........+..+... .. . ......++++++|+++++|++|.++|++..+.+.+..+. .+
T Consensus 239 ~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~ 318 (350)
T TIGR01836 239 RMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYT 318 (350)
T ss_pred HHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeE
Confidence 011111111122221110 00 0 001234678899999999999999999998888777653 45
Q ss_pred EEEeCCCCCCcchhc---hhHHHHHHHHhhhh
Q 024971 216 FIVLPNVGHCPQVSL---YLSLSSACLHTLSY 244 (260)
Q Consensus 216 ~~~~~~~gH~~~~~~---p~~~~~~i~~~l~~ 244 (260)
+++++ +||..++.+ ++++.+.|.+|++.
T Consensus 319 ~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 319 ELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred EEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 66777 699876554 47888888888753
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=134.60 Aligned_cols=178 Identities=10% Similarity=0.030 Sum_probs=102.9
Q ss_pred CCccEEEEEcCCCC-CCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~-G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
.+||.|+.+|.||+ |.|++.. ...+......|+..+++.+ +.+++.|+||||||.+|+..|...+ ++
T Consensus 62 ~~G~~vLrfD~rg~~GeS~G~~-------~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~--v~ 132 (307)
T PRK13604 62 SNGFHVIRYDSLHHVGLSSGTI-------DEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEID--LS 132 (307)
T ss_pred HCCCEEEEecCCCCCCCCCCcc-------ccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCC--CC
Confidence 46999999999988 9997644 2233334466775555554 5568999999999999977776443 88
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcc-cHHHHHHHhccCCc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV-TEELVEKILQPGLE 158 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 158 (260)
++|+.+|..... ..+...+... .. . +.....+..+. +. .... ...+.......
T Consensus 133 ~lI~~sp~~~l~-------------d~l~~~~~~~-~~-~-~p~~~lp~~~d------~~-g~~l~~~~f~~~~~~~--- 186 (307)
T PRK13604 133 FLITAVGVVNLR-------------DTLERALGYD-YL-S-LPIDELPEDLD------FE-GHNLGSEVFVTDCFKH--- 186 (307)
T ss_pred EEEEcCCcccHH-------------HHHHHhhhcc-cc-c-Ccccccccccc------cc-cccccHHHHHHHHHhc---
Confidence 999999874321 0000000000 00 0 00000000000 00 0000 00111000000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC--CCccEEEeCCCCCCcc
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD--SVEDFIVLPNVGHCPQ 227 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 227 (260)
.......+.+..+++++|+|+|+|++|.++|.+.++.+.+.. .++++++++|++|.+.
T Consensus 187 -----------~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 187 -----------GWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred -----------CccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 000001112445677899999999999999999998887764 4789999999999875
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.9e-20 Score=128.71 Aligned_cols=224 Identities=18% Similarity=0.201 Sum_probs=124.7
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.+.++|.|+-+|.||+.......+.+ -...|++++++++.+++++++++.++.+|-..|+.|..++|..+|++|.|+
T Consensus 51 ~i~~~f~i~Hi~aPGqe~ga~~~p~~---y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GL 127 (283)
T PF03096_consen 51 EILQNFCIYHIDAPGQEEGAATLPEG---YQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGL 127 (283)
T ss_dssp HHHTTSEEEEEE-TTTSTT-----TT--------HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEE
T ss_pred HHhhceEEEEEeCCCCCCCccccccc---ccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEE
Confidence 35678999999999998765544322 136699999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCc-ccHHHHHHHhcc---CC
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ-VTEELVEKILQP---GL 157 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~ 157 (260)
||+++..... ...++....+ ....+.............+...++.... ...+..+.+... ..
T Consensus 128 iLvn~~~~~~----------gw~Ew~~~K~----~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~ 193 (283)
T PF03096_consen 128 ILVNPTCTAA----------GWMEWFYQKL----SSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERI 193 (283)
T ss_dssp EEES---S-------------HHHHHHHHH----H-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-T
T ss_pred EEEecCCCCc----------cHHHHHHHHH----hcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCC
Confidence 9999975321 1111111111 1111111111122222222222221111 122333333322 22
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc--CCCccEEEeCCCCCCcchhchhHHH
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
.+.....+.+ .+..+.+.....+...||+|++.|+..+... ....+..+ ..+.++..++++|=.+..|+|+.++
T Consensus 194 Np~Nl~~f~~--sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~--~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~kla 269 (283)
T PF03096_consen 194 NPKNLALFLN--SYNSRTDLSIERPSLGCPVLLVVGDNSPHVD--DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLA 269 (283)
T ss_dssp THHHHHHHHH--HHHT-----SECTTCCS-EEEEEETTSTTHH--HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHH
T ss_pred CHHHHHHHHH--HHhccccchhhcCCCCCCeEEEEecCCcchh--hHHHHHhhcCcccceEEEecccCCcccccCcHHHH
Confidence 2223333333 3344444455667778999999999998653 33333333 2356888999999999999999999
Q ss_pred HHHHHhhhhcc
Q 024971 236 SACLHTLSYLH 246 (260)
Q Consensus 236 ~~i~~~l~~~~ 246 (260)
+.++-|++.+.
T Consensus 270 ea~~lFlQG~G 280 (283)
T PF03096_consen 270 EAFKLFLQGMG 280 (283)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHccCC
Confidence 99999998654
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-19 Score=131.18 Aligned_cols=223 Identities=21% Similarity=0.276 Sum_probs=124.7
Q ss_pred cEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEecc
Q 024971 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (260)
Q Consensus 7 ~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 86 (260)
|+|+++|+||||.|. . . ..+...+++++..++++++..+++++||||||.+++.++.++|++++++|++++
T Consensus 51 ~~~~~~d~~g~g~s~--~------~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~ 121 (282)
T COG0596 51 YRVIAPDLRGHGRSD--P------A-GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGP 121 (282)
T ss_pred eEEEEecccCCCCCC--c------c-cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecC
Confidence 999999999999998 1 1 234455599999999999988899999999999999999999999999999998
Q ss_pred CccccccCCCCC--CCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHh----ccCCCCcccHHHHHHHhccCCccc
Q 024971 87 SLRMLHIKKQPW--YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ----CYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 87 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
............ ................... .................. ...................... .
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 199 (282)
T COG0596 122 APPPGLLEAALRQPAGAAPLAALADLLLGLDAA-AFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAAR-A 199 (282)
T ss_pred CCCcccccCccccCccccchhhhhhhhhccchh-hhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcc-c
Confidence 754211111100 0000000000000000000 000000000000000000 0000000000000000000000 0
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
.................+..+++|+++++|++|.+.+......+.+..++ .++.+++++||+++.++|+.+.+.+.
T Consensus 200 ---~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 276 (282)
T COG0596 200 ---DLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALL 276 (282)
T ss_pred ---ccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHH
Confidence 00000000000012345667789999999999977776655666666774 89999999999999999999998888
Q ss_pred Hhhh
Q 024971 240 HTLS 243 (260)
Q Consensus 240 ~~l~ 243 (260)
++++
T Consensus 277 ~~~~ 280 (282)
T COG0596 277 AFLE 280 (282)
T ss_pred HHHh
Confidence 7543
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-18 Score=124.61 Aligned_cols=239 Identities=16% Similarity=0.127 Sum_probs=145.5
Q ss_pred CccEEEEEcCCCCC-CCCCCCCCCCC------CCCCccHHHHHHHHHHHHHhhcCCceE-EEEeChhhHHHHHHHhhCcc
Q 024971 5 KSHRVYSIDLIGYG-YSDKPNPRDFF------DKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQAAVMEPE 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G-~S~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~ 76 (260)
..|.||+.|-.|.+ .|+.|...+.. .-..+++.|+++.-..+++++|++++. +||.||||+.++.++..||+
T Consensus 91 ~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd 170 (368)
T COG2021 91 ERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD 170 (368)
T ss_pred cceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH
Confidence 46999999999876 55555433222 113478999999889999999999977 88999999999999999999
Q ss_pred chhhceEeccCcccccc-------------CCCCCCCcchhHHHhhhhhhhhhHHHH-HHHhcChHHHHHHHHhccCCCC
Q 024971 77 ICRGMILLNISLRMLHI-------------KKQPWYGRPLIRSFQNLLRNTAAGKLF-YKMVATSESVRNILCQCYNDTS 142 (260)
Q Consensus 77 ~v~~lvl~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 142 (260)
+|+++|.+++....... ....|....+...- .-.......+.+ .-...+++.+.+.+.+......
T Consensus 171 ~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~-~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~ 249 (368)
T COG2021 171 RVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGT-QPERGLRLARMLAHLTYRSEEELDERFGRRLQADP 249 (368)
T ss_pred HHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCC-CcchhHHHHHHHHHHHccCHHHHHHHhcccccccc
Confidence 99999999986533210 00001000000000 000000111111 1122333444333332111111
Q ss_pred -c--ccHHHHHHHhccC----CccchHHHHHHHHhhhCCCCC-------CccCCCCCCCEEEEecCCCCCCChHHHHHhh
Q 024971 143 -Q--VTEELVEKILQPG----LETGAADVFLEFICYSGGPLP-------EELLPQVKCPVLIAWGDKDPWEPIELGRAYG 208 (260)
Q Consensus 143 -~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 208 (260)
. .....++.|+... ......+.|..+.......+. .+.++++++|++++.-+.|.+.|++..+.+.
T Consensus 250 ~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~ 329 (368)
T COG2021 250 LRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALA 329 (368)
T ss_pred cCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHH
Confidence 1 1122333333321 122222333333332222222 2348899999999999999999999999999
Q ss_pred ccCCCcc-EEEe-CCCCCCcchhchhHHHHHHHHhhhh
Q 024971 209 NFDSVED-FIVL-PNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 209 ~~~~~~~-~~~~-~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
+.++.+. ++++ ...||..++...+.+...|.+||+.
T Consensus 330 ~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 330 EALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 9888776 7666 3579998888888899999999864
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.4e-19 Score=120.32 Aligned_cols=201 Identities=13% Similarity=0.081 Sum_probs=123.8
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH-hhcCCceEEEEeChhhHHHHHHHhhCcc---c
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK-DVVKDQAFFICNSIGGLVGLQAAVMEPE---I 77 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~ 77 (260)
.|.....++++++||+|.--..+ -..+++++++.+...+. -...+++.++||||||++|..+|.+... .
T Consensus 29 ~lp~~iel~avqlPGR~~r~~ep-------~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~ 101 (244)
T COG3208 29 RLPADIELLAVQLPGRGDRFGEP-------LLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLP 101 (244)
T ss_pred hCCchhheeeecCCCcccccCCc-------ccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCC
Confidence 35567899999999999875544 35789999999998888 4555799999999999999999976532 1
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
+.++.+.+...+... .............+..+.... ..+..+ -.++++.+.++ +
T Consensus 102 p~~lfisg~~aP~~~-~~~~i~~~~D~~~l~~l~~lg----------G~p~e~------------led~El~~l~L-P-- 155 (244)
T COG3208 102 PRALFISGCRAPHYD-RGKQIHHLDDADFLADLVDLG----------GTPPEL------------LEDPELMALFL-P-- 155 (244)
T ss_pred cceEEEecCCCCCCc-ccCCccCCCHHHHHHHHHHhC----------CCChHH------------hcCHHHHHHHH-H--
Confidence 555665555433111 000111111111111111100 011000 01112211111 0
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEEeCCCCCCcchhchhHHHH
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
.+..-+.....+. ...-..++||+.++.|++|..+..+....|.++.. ..++++++| ||+...++.+++.+
T Consensus 156 ------ilRAD~~~~e~Y~-~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~ 227 (244)
T COG3208 156 ------ILRADFRALESYR-YPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLA 227 (244)
T ss_pred ------HHHHHHHHhcccc-cCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHH
Confidence 1111111111111 12225688999999999999999999998888755 678999995 99999999999999
Q ss_pred HHHHhhh
Q 024971 237 ACLHTLS 243 (260)
Q Consensus 237 ~i~~~l~ 243 (260)
.|.+.+.
T Consensus 228 ~i~~~l~ 234 (244)
T COG3208 228 RLEQHLA 234 (244)
T ss_pred HHHHHhh
Confidence 9988885
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.8e-18 Score=116.86 Aligned_cols=223 Identities=18% Similarity=0.215 Sum_probs=142.5
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
+..+|.|+.+|-|||-.....-+.++ ...|++++++++..++++++.+.++-+|-..|+.|..++|..||++|.|+|
T Consensus 75 i~~~fcv~HV~~PGqe~gAp~~p~~y---~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLv 151 (326)
T KOG2931|consen 75 ILEHFCVYHVDAPGQEDGAPSFPEGY---PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLV 151 (326)
T ss_pred HHhheEEEecCCCccccCCccCCCCC---CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEE
Confidence 44569999999999976655444321 356999999999999999999999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCC-cccHHHHHHHhccC---Cc
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTS-QVTEELVEKILQPG---LE 158 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~ 158 (260)
|+++.+... ....+.. .......+.............+...++... ....+.++.|.... ..
T Consensus 152 LIn~~~~a~----------gwiew~~----~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N 217 (326)
T KOG2931|consen 152 LINCDPCAK----------GWIEWAY----NKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLN 217 (326)
T ss_pred EEecCCCCc----------hHHHHHH----HHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCC
Confidence 999875321 1111111 111111111111122222223333333222 22344444444332 33
Q ss_pred cchHHHHHHHHhhhCCCCCCccCC----CCCCCEEEEecCCCCCCChHHHHHhhcc--CCCccEEEeCCCCCCcchhchh
Q 024971 159 TGAADVFLEFICYSGGPLPEELLP----QVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~----~i~~P~l~i~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~p~ 232 (260)
+.....+...+. .+.+...... .++||+|++.|++.+.+. ....+... ..+..+..+.++|-.+..++|.
T Consensus 218 ~~Nl~~fl~ayn--~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~ 293 (326)
T KOG2931|consen 218 PKNLALFLNAYN--GRRDLSIERPKLGTTLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPG 293 (326)
T ss_pred hhHHHHHHHHhc--CCCCccccCCCcCccccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCch
Confidence 333344433332 2222222222 556999999999988654 23333333 2356788889999999999999
Q ss_pred HHHHHHHHhhhhcc
Q 024971 233 SLSSACLHTLSYLH 246 (260)
Q Consensus 233 ~~~~~i~~~l~~~~ 246 (260)
++.+.+.-|++-..
T Consensus 294 kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 294 KLAEAFKYFLQGMG 307 (326)
T ss_pred HHHHHHHHHHccCC
Confidence 99999999997654
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.7e-19 Score=120.35 Aligned_cols=159 Identities=11% Similarity=0.005 Sum_probs=105.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
.+|+|+++|+|||| ++.++++.+++++++.++++++||||||.+++.+|.++|. ++|++
T Consensus 31 ~~~~v~~~dl~g~~------------------~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~ 89 (190)
T PRK11071 31 PDIEMIVPQLPPYP------------------ADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVV 89 (190)
T ss_pred CCCeEEeCCCCCCH------------------HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEE
Confidence 47999999999984 2577888899999998999999999999999999999983 46888
Q ss_pred ccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHH
Q 024971 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (260)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (260)
+|+..+ ...+........ ..................
T Consensus 90 ~~~~~~-------------~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~d~------------ 125 (190)
T PRK11071 90 NPAVRP-------------FELLTDYLGENE-------------------NPYTGQQYVLESRHIYDL------------ 125 (190)
T ss_pred CCCCCH-------------HHHHHHhcCCcc-------------------cccCCCcEEEcHHHHHHH------------
Confidence 886421 011110000000 000000001111111111
Q ss_pred HHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhh
Q 024971 165 FLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~ 243 (260)
... . ...+. ..+|+++++|++|.++|.+.+..+.+. ++.++++|++|.. ...+++.+.+.+|+.
T Consensus 126 ----~~~----~-~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 126 ----KVM----Q-IDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred ----Hhc----C-CccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 000 1 12233 678899999999999999999988774 5677889999976 344888888888874
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=145.61 Aligned_cols=236 Identities=15% Similarity=0.137 Sum_probs=131.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh---hcCCceEEEEeChhhHHHHHHHhhC-ccchh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VVKDQAFFICNSIGGLVGLQAAVME-PEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~ 79 (260)
++||+|+++|+ |.++.+.. ....++.+++..+.+.++. +..++++++||||||.+++.+++.+ +++|+
T Consensus 97 ~~g~~v~~~d~---G~~~~~~~-----~~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~ 168 (994)
T PRK07868 97 RAGLDPWVIDF---GSPDKVEG-----GMERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIA 168 (994)
T ss_pred HCCCEEEEEcC---CCCChhHc-----CccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccc
Confidence 46899999994 66655431 1235777777666666654 3446899999999999999998755 56899
Q ss_pred hceEeccCccccccCCCCCCC-------cchhHHHhhhhhhhh-hHHHHHHHhcC---hHHHHHHHHhccCCCCcccHHH
Q 024971 80 GMILLNISLRMLHIKKQPWYG-------RPLIRSFQNLLRNTA-AGKLFYKMVAT---SESVRNILCQCYNDTSQVTEEL 148 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 148 (260)
++|+++++............. ......+........ .....+..... ......++..........+++.
T Consensus 169 ~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~ 248 (994)
T PRK07868 169 SIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQ 248 (994)
T ss_pred eEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchh
Confidence 999999886542211000000 000000000000000 00000111100 0111112222222221222222
Q ss_pred HHHHhccC---Ccc--chHHHHHHHHhhhCCC-------CCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccE
Q 024971 149 VEKILQPG---LET--GAADVFLEFICYSGGP-------LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF 216 (260)
Q Consensus 149 ~~~~~~~~---~~~--~~~~~~~~~~~~~~~~-------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 216 (260)
...+.... ... ........+....... .....+++|++|+|+|+|++|.++|++..+.+.+..++.++
T Consensus 249 ~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~ 328 (994)
T PRK07868 249 QRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEV 328 (994)
T ss_pred hHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeE
Confidence 22222111 011 1112222222110100 00135889999999999999999999999999988999887
Q ss_pred -EEeCCCCCCcchh---chhHHHHHHHHhhhhccc
Q 024971 217 -IVLPNVGHCPQVS---LYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 217 -~~~~~~gH~~~~~---~p~~~~~~i~~~l~~~~~ 247 (260)
.+++++||+.++- .++++...|.+||++-+.
T Consensus 329 ~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 329 YESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred EEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 6789999986653 578888999999987654
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.4e-19 Score=119.95 Aligned_cols=164 Identities=19% Similarity=0.203 Sum_probs=113.6
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh-hc-CCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VV-KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
+++|+++|++|+|.|.+.+. +. ..-+.++.+.+.++. .| .++++|+|+|+|+..++.+|.+.| +.++||
T Consensus 88 n~nv~~~DYSGyG~S~G~ps------E~-n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL 158 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKPS------ER-NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVL 158 (258)
T ss_pred cceEEEEecccccccCCCcc------cc-cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEE
Confidence 78999999999999998772 22 222223333333333 33 578999999999999999999998 999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHH
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (260)
.+|...... -..... ... ++ .+
T Consensus 159 ~SPf~S~~r----------------v~~~~~----------------------------~~~------~~--------~d 180 (258)
T KOG1552|consen 159 HSPFTSGMR----------------VAFPDT----------------------------KTT------YC--------FD 180 (258)
T ss_pred eccchhhhh----------------hhccCc----------------------------ceE------Ee--------ec
Confidence 999642210 000000 000 00 00
Q ss_pred HHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCc-cEEEeCCCCCCcchhchhHHHHHHHHhh
Q 024971 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE-DFIVLPNVGHCPQVSLYLSLSSACLHTL 242 (260)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~~l 242 (260)
. ....+..+.++||+|+++|++|.+++....+.+.+..++. +-.++.|+||.-. +...++.+.+.+|+
T Consensus 181 ~----------f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~-~~~~~yi~~l~~f~ 249 (258)
T KOG1552|consen 181 A----------FPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDI-ELYPEYIEHLRRFI 249 (258)
T ss_pred c----------ccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccc-ccCHHHHHHHHHHH
Confidence 0 0003567889999999999999999999999988886654 7788899999864 44567777888888
Q ss_pred hhccc
Q 024971 243 SYLHT 247 (260)
Q Consensus 243 ~~~~~ 247 (260)
.....
T Consensus 250 ~~~~~ 254 (258)
T KOG1552|consen 250 SSVLP 254 (258)
T ss_pred HHhcc
Confidence 76543
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-19 Score=124.83 Aligned_cols=210 Identities=15% Similarity=0.193 Sum_probs=117.4
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc---CCceEEEEeChhhHHHHHHHhh--Cccchhh
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVM--EPEICRG 80 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~ 80 (260)
..+|+++|+||||+|...+. ...+.+.+++|+.++++.+- ..+++||||||||.+|.+.|.. -|. +.|
T Consensus 102 ~~r~~a~DlRgHGeTk~~~e------~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~G 174 (343)
T KOG2564|consen 102 RCRCLALDLRGHGETKVENE------DDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAG 174 (343)
T ss_pred ceeEEEeeccccCccccCCh------hhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhc
Confidence 46789999999999988773 67899999999999999883 3579999999999999887754 465 889
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCC---Cc--ccHHHHH-----
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDT---SQ--VTEELVE----- 150 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~----- 150 (260)
+++++-.-.. .......+..+++..+.... . -...+..-++.....+ .. ++.....
T Consensus 175 l~viDVVEgt---------AmeAL~~m~~fL~~rP~~F~---S--i~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh 240 (343)
T KOG2564|consen 175 LVVIDVVEGT---------AMEALNSMQHFLRNRPKSFK---S--IEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGH 240 (343)
T ss_pred eEEEEEechH---------HHHHHHHHHHHHhcCCcccc---c--hhhHHHHHhccccccccccceEecchheeeccCCC
Confidence 9988864210 01111122222222111000 0 0000000010000000 00 0000000
Q ss_pred HHhccCCccchHHHH-HHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchh
Q 024971 151 KILQPGLETGAADVF-LEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229 (260)
Q Consensus 151 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 229 (260)
.|... ........| ..++.- ....+-...+|.++|.+..|..-..-. +-+.-..-++.+++.+||+.+.+
T Consensus 241 ~yvwr-tdL~kte~YW~gWF~g-----LS~~Fl~~p~~klLilAg~d~LDkdLt---iGQMQGk~Q~~vL~~~GH~v~ED 311 (343)
T KOG2564|consen 241 CYVWR-TDLEKTEQYWKGWFKG-----LSDKFLGLPVPKLLILAGVDRLDKDLT---IGQMQGKFQLQVLPLCGHFVHED 311 (343)
T ss_pred cEEEE-eeccccchhHHHHHhh-----hhhHhhCCCccceeEEecccccCccee---eeeeccceeeeeecccCceeccC
Confidence 00000 000011111 111110 123344567888888888876432111 11222335788999999999999
Q ss_pred chhHHHHHHHHhhhhc
Q 024971 230 LYLSLSSACLHTLSYL 245 (260)
Q Consensus 230 ~p~~~~~~i~~~l~~~ 245 (260)
.|..++..+..|+...
T Consensus 312 ~P~kva~~~~~f~~Rn 327 (343)
T KOG2564|consen 312 SPHKVAECLCVFWIRN 327 (343)
T ss_pred CcchHHHHHHHHHhhh
Confidence 9999999999998543
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-18 Score=119.36 Aligned_cols=187 Identities=18% Similarity=0.144 Sum_probs=106.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCC-CCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPR-DFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
++||.|+.+|+||.+........ .........++|..+.+..+++.. +.+++.++|||+||.+++.++.++|+++++
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a 91 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKA 91 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSE
T ss_pred hCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeee
Confidence 68999999999998753221000 000012223444444444444442 346899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
++..++......... .... .... .... ...... ..+.
T Consensus 92 ~v~~~g~~d~~~~~~--------~~~~--------~~~~-------------~~~~-~~~~~~-~~~~------------ 128 (213)
T PF00326_consen 92 AVAGAGVSDLFSYYG--------TTDI--------YTKA-------------EYLE-YGDPWD-NPEF------------ 128 (213)
T ss_dssp EEEESE-SSTTCSBH--------HTCC--------HHHG-------------HHHH-HSSTTT-SHHH------------
T ss_pred eeccceecchhcccc--------cccc--------cccc-------------cccc-cCccch-hhhh------------
Confidence 999998653311000 0000 0000 0000 000000 1111
Q ss_pred hHHHHHHHHhhhCCCCCCccCCC--CCCCEEEEecCCCCCCChHHHHHhhc----cCCCccEEEeCCCCCCcc-hhchhH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQ--VKCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQ-VSLYLS 233 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~--i~~P~l~i~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~gH~~~-~~~p~~ 233 (260)
+..... ...+.+ +++|+|+++|++|..+|++.+..+.+ ...+++++++|++||... .+...+
T Consensus 129 ----~~~~s~-------~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~ 197 (213)
T PF00326_consen 129 ----YRELSP-------ISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRD 197 (213)
T ss_dssp ----HHHHHH-------GGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHH
T ss_pred ----hhhhcc-------ccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHH
Confidence 111110 122333 78999999999999999887766443 344589999999999544 455567
Q ss_pred HHHHHHHhhhh
Q 024971 234 LSSACLHTLSY 244 (260)
Q Consensus 234 ~~~~i~~~l~~ 244 (260)
..+.+.+|++.
T Consensus 198 ~~~~~~~f~~~ 208 (213)
T PF00326_consen 198 WYERILDFFDK 208 (213)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777788754
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.3e-18 Score=121.46 Aligned_cols=61 Identities=18% Similarity=0.056 Sum_probs=45.7
Q ss_pred cCCCC-CCCEEEEecCCCCCCChHHHHHhhccCC------CccEEEeCCCCCCcchhchhHHHHHHHHhhhh
Q 024971 180 LLPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDS------VEDFIVLPNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 180 ~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
.+.++ ++|+|+++|++|.++|.+..+.+.+.++ +++++.++++||... + ...+.+.+||+.
T Consensus 180 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 180 QLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred hhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 34555 6999999999999999998888766532 356778899999864 2 345667777763
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.1e-16 Score=119.57 Aligned_cols=211 Identities=11% Similarity=0.100 Sum_probs=120.6
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHH----HHhhC
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQ----AAVME 74 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~----~a~~~ 74 (260)
+.+||+|+++|+++-+.+.. ..+++++++.+.+.++.+ |.++++++|||+||.++.. +++++
T Consensus 244 v~qG~~VflIsW~nP~~~~r----------~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~ 313 (560)
T TIGR01839 244 LKNQLQVFIISWRNPDKAHR----------EWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALG 313 (560)
T ss_pred HHcCCeEEEEeCCCCChhhc----------CCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcC
Confidence 46899999999999776643 468899988777777665 5689999999999999997 78888
Q ss_pred cc-chhhceEeccCccccccCCCCCCC-cchhHHHhhh------hhhhhhHHHHHHHhcChHHH-HHHHHhccCCCCccc
Q 024971 75 PE-ICRGMILLNISLRMLHIKKQPWYG-RPLIRSFQNL------LRNTAAGKLFYKMVATSESV-RNILCQCYNDTSQVT 145 (260)
Q Consensus 75 p~-~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 145 (260)
++ +|++++++.++..+........+. .......... +....+.. .+..+.....+ ...+...........
T Consensus 314 ~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~-~F~~LrP~dliw~y~v~~yllg~~p~~ 392 (560)
T TIGR01839 314 QLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAK-VFAWMRPNDLIWNYWVNNYLLGNEPPA 392 (560)
T ss_pred CCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHH-HHHhcCchhhhHHHHHHHhhcCCCcch
Confidence 86 799999999988754322111111 1111111111 11111111 12222222222 222222212222222
Q ss_pred HHHHHHHhccCCcc-c-hHHHHHHHHhhhCCC--------CCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-Cc
Q 024971 146 EELVEKILQPGLET-G-AADVFLEFICYSGGP--------LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VE 214 (260)
Q Consensus 146 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~--------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~ 214 (260)
.+ ...+....... + ....+..++...... ...-.+++|+||++++.|+.|.++|++.+..+.+... +.
T Consensus 393 fd-ll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~ 471 (560)
T TIGR01839 393 FD-ILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKR 471 (560)
T ss_pred hh-HHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCe
Confidence 22 22222222221 1 112222322211110 0123578999999999999999999999988877754 45
Q ss_pred cEEEeCCCCCCc
Q 024971 215 DFIVLPNVGHCP 226 (260)
Q Consensus 215 ~~~~~~~~gH~~ 226 (260)
+++..+ +||..
T Consensus 472 ~fvl~~-gGHIg 482 (560)
T TIGR01839 472 RFVLSN-SGHIQ 482 (560)
T ss_pred EEEecC-CCccc
Confidence 666655 68853
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-17 Score=110.07 Aligned_cols=121 Identities=24% Similarity=0.346 Sum_probs=90.7
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
++||.|+.+|+||+|.+... ...+++.+++. .+..+.++++++|||+||.+++.++.+. .+++++|+
T Consensus 24 ~~G~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~ 90 (145)
T PF12695_consen 24 EQGYAVVAFDYPGHGDSDGA----------DAVERVLADIR--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVL 90 (145)
T ss_dssp HTTEEEEEESCTTSTTSHHS----------HHHHHHHHHHH--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEE
T ss_pred HCCCEEEEEecCCCCccchh----------HHHHHHHHHHH--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEE
Confidence 46899999999999988331 24444444433 1123667999999999999999999988 67999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHH
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (260)
+++.+.
T Consensus 91 ~~~~~~-------------------------------------------------------------------------- 96 (145)
T PF12695_consen 91 LSPYPD-------------------------------------------------------------------------- 96 (145)
T ss_dssp ESESSG--------------------------------------------------------------------------
T ss_pred ecCccc--------------------------------------------------------------------------
Confidence 998210
Q ss_pred HHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEEeCCCCCC
Q 024971 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGHC 225 (260)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 225 (260)
.+.+.+.+.|+++++|++|..++.+..+.+.+..+ +.++.+++|++|+
T Consensus 97 --------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 --------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp --------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred --------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 11233455699999999999999988888766644 6899999999995
|
... |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=110.30 Aligned_cols=80 Identities=24% Similarity=0.310 Sum_probs=71.3
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCC-ceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
..|.|+|.+++||+|.++.+. ...++-++....+.++++.++++ +++.+|||.||-.|+.+|..+| +.|++
T Consensus 60 ~~~iR~I~iN~PGf~~t~~~~------~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~ 131 (297)
T PF06342_consen 60 EAGIRFIGINYPGFGFTPGYP------DQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLV 131 (297)
T ss_pred HcCeEEEEeCCCCCCCCCCCc------ccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEE
Confidence 368999999999999999877 47889999999999999999875 6889999999999999999996 67999
Q ss_pred EeccCcccc
Q 024971 83 LLNISLRML 91 (260)
Q Consensus 83 l~~~~~~~~ 91 (260)
+++|+....
T Consensus 132 lin~~G~r~ 140 (297)
T PF06342_consen 132 LINPPGLRP 140 (297)
T ss_pred EecCCcccc
Confidence 999986543
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-15 Score=101.51 Aligned_cols=182 Identities=20% Similarity=0.201 Sum_probs=114.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCc---eEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ---AFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+.++.+|.+|.|+|+.... .-.....++|+..+++++.... -+++|||-||.+++.+|.++++ +.-+
T Consensus 61 ~gis~fRfDF~GnGeS~gsf~-------~Gn~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~v 132 (269)
T KOG4667|consen 61 EGISAFRFDFSGNGESEGSFY-------YGNYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNV 132 (269)
T ss_pred cCceEEEEEecCCCCcCCccc-------cCcccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chhe
Confidence 589999999999999988652 2344556799999999985432 3688999999999999999987 6666
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCC--------CCcccHHHHHHHh
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND--------TSQVTEELVEKIL 153 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 153 (260)
|-+++-... +.... .. ..+..+.....+.+-+ ...+.++.....+
T Consensus 133 iNcsGRydl----------~~~I~---eR--------------lg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrL 185 (269)
T KOG4667|consen 133 INCSGRYDL----------KNGIN---ER--------------LGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRL 185 (269)
T ss_pred EEcccccch----------hcchh---hh--------------hcccHHHHHHhCCceecCcccCCcCceecHHHHHHHH
Confidence 666553221 11010 00 0111111111111111 0112222222111
Q ss_pred ccCCccchHHHHHHHHhhhCCCCCCccCC--CCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhch
Q 024971 154 QPGLETGAADVFLEFICYSGGPLPEELLP--QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLY 231 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 231 (260)
.. +..+... ..+||||-++|..|.++|.+.++++++.+|+.++.+++|+.|.....+
T Consensus 186 nt--------------------d~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q- 244 (269)
T KOG4667|consen 186 NT--------------------DIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQ- 244 (269)
T ss_pred hc--------------------hhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchh-
Confidence 10 1112222 236999999999999999999999999999999999999999755432
Q ss_pred hHHHHHHHHhh
Q 024971 232 LSLSSACLHTL 242 (260)
Q Consensus 232 ~~~~~~i~~~l 242 (260)
.+.......|.
T Consensus 245 ~~l~~lgl~f~ 255 (269)
T KOG4667|consen 245 SQLVSLGLEFI 255 (269)
T ss_pred hhHhhhcceeE
Confidence 34444444444
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.6e-17 Score=108.16 Aligned_cols=171 Identities=17% Similarity=0.139 Sum_probs=114.8
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+..|+.+++||+|.|++.+. -+.+.-|-..+++++ ...++++.|-|.||++|..+|++..+++.
T Consensus 106 ~mnv~ivsYRGYG~S~Gsps----------E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~ 175 (300)
T KOG4391|consen 106 KMNVLIVSYRGYGKSEGSPS----------EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRIS 175 (300)
T ss_pred CceEEEEEeeccccCCCCcc----------ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhhee
Confidence 57899999999999998762 222333334444444 34589999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|+-++....+...... .. +.. ......++.
T Consensus 176 ~~ivENTF~SIp~~~i~~-------------v~--p~~----------------------------~k~i~~lc~----- 207 (300)
T KOG4391|consen 176 AIIVENTFLSIPHMAIPL-------------VF--PFP----------------------------MKYIPLLCY----- 207 (300)
T ss_pred eeeeechhccchhhhhhe-------------ec--cch----------------------------hhHHHHHHH-----
Confidence 999998864331100000 00 000 000000000
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC--CccEEEeCCCCCCcchhchhHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
.........+.+-+.|.|++.|.+|.++|+...+.+.+..| +.++.++|++.|.-..- -+-..++
T Consensus 208 ------------kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~ 274 (300)
T KOG4391|consen 208 ------------KNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQA 274 (300)
T ss_pred ------------HhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHH
Confidence 00000023344567999999999999999999999888865 46899999999965443 3678889
Q ss_pred HHHhhhhccc
Q 024971 238 CLHTLSYLHT 247 (260)
Q Consensus 238 i~~~l~~~~~ 247 (260)
|.+|+.+...
T Consensus 275 i~dFlaE~~~ 284 (300)
T KOG4391|consen 275 IEDFLAEVVK 284 (300)
T ss_pred HHHHHHHhcc
Confidence 9999977765
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-15 Score=107.07 Aligned_cols=219 Identities=15% Similarity=0.109 Sum_probs=114.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCcc--c
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE--I 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~--~ 77 (260)
++||.|++++.|||+.+....++-+. .-+.+|+..+++.+ ...++..+|.|+||.....+..+..+ .
T Consensus 102 ~rg~~~Vv~~~Rgcs~~~n~~p~~yh-------~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~ 174 (345)
T COG0429 102 RRGWLVVVFHFRGCSGEANTSPRLYH-------SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLP 174 (345)
T ss_pred hcCCeEEEEecccccCCcccCcceec-------ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcc
Confidence 57999999999999999876643221 11224555554444 55799999999999555555444322 2
Q ss_pred hhhceEeccCccccccC---CCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCccc-HHHHHHH-
Q 024971 78 CRGMILLNISLRMLHIK---KQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVT-EELVEKI- 152 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 152 (260)
+.+.+.++.+....... ...+..+.+...+ .+.+.+. +..-+... ....... .+..+..
T Consensus 175 ~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l---------~~~L~~~------~~~kl~~l-~~~~p~~~~~~ik~~~ 238 (345)
T COG0429 175 LDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYL---------LRNLKRN------AARKLKEL-EPSLPGTVLAAIKRCR 238 (345)
T ss_pred cceeeeeeCHHHHHHHHHHhcCchhhhhhHHHH---------HHHHHHH------HHHHHHhc-CcccCcHHHHHHHhhc
Confidence 55555555543221000 0000000000000 0000000 00001111 0000000 1111110
Q ss_pred --hc-cCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhc-cCCCccEEEeCCCCCCcch
Q 024971 153 --LQ-PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 153 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~ 228 (260)
.+ ...-.....-+.+...+.........+++|.+|+|+|++.+|++++++....... ..|++.+.+-+.+||..++
T Consensus 239 ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl 318 (345)
T COG0429 239 TIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFL 318 (345)
T ss_pred hHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEec
Confidence 00 0000011111111222222333467889999999999999999999987766655 6888999999999998877
Q ss_pred h----chh-HHHHHHHHhhhhc
Q 024971 229 S----LYL-SLSSACLHTLSYL 245 (260)
Q Consensus 229 ~----~p~-~~~~~i~~~l~~~ 245 (260)
. +|. -..+.+.+|++..
T Consensus 319 ~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 319 GGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred cCccccchhhHHHHHHHHHHHH
Confidence 6 343 3456677777543
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.7e-16 Score=111.72 Aligned_cols=77 Identities=19% Similarity=0.282 Sum_probs=65.5
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH---hhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.||+|+++|+||||.|.... ...+++.+++|+..+++ +.+.++++++||||||.+++.+|.++|++++++
T Consensus 55 ~Gy~Vl~~Dl~G~G~S~g~~-------~~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~l 127 (266)
T TIGR03101 55 GGFGVLQIDLYGCGDSAGDF-------AAARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRL 127 (266)
T ss_pred CCCEEEEECCCCCCCCCCcc-------ccCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceE
Confidence 68999999999999997654 23577888888776544 446679999999999999999999999999999
Q ss_pred eEeccCc
Q 024971 82 ILLNISL 88 (260)
Q Consensus 82 vl~~~~~ 88 (260)
|+++|..
T Consensus 128 VL~~P~~ 134 (266)
T TIGR03101 128 VLWQPVV 134 (266)
T ss_pred EEecccc
Confidence 9999864
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.9e-15 Score=107.92 Aligned_cols=220 Identities=17% Similarity=0.140 Sum_probs=118.3
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
+..+||+|++++.||+|.|.-..++-+ + ..+.+|+.++++++ ...+...+|.||||.+.+.|..+..++
T Consensus 150 a~~~G~r~VVfN~RG~~g~~LtTpr~f------~-ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~ 222 (409)
T KOG1838|consen 150 AQRKGYRVVVFNHRGLGGSKLTTPRLF------T-AGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDN 222 (409)
T ss_pred HHhCCcEEEEECCCCCCCCccCCCcee------e-cCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCC
Confidence 456899999999999999988775432 2 12344444444444 445899999999999999999875443
Q ss_pred ---hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHh-----cChH-HHHHHHHhccCCCCcccHHH
Q 024971 78 ---CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV-----ATSE-SVRNILCQCYNDTSQVTEEL 148 (260)
Q Consensus 78 ---v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~ 148 (260)
+.++++.+|. ... .....+..........+.+.... .... .+................++
T Consensus 223 ~~l~~a~~v~~Pw-d~~----------~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreF 291 (409)
T KOG1838|consen 223 TPLIAAVAVCNPW-DLL----------AASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREF 291 (409)
T ss_pred CCceeEEEEeccc-hhh----------hhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHH
Confidence 3444444443 210 00000000000000011000000 0000 00000000001111222333
Q ss_pred HHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHH-HHhhccCCCccEEEeCCCCCCcc
Q 024971 149 VEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQ 227 (260)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~ 227 (260)
-+.+......-...+.|. ........+.+|++|+|+|++.+|+++|.+.. ....+..|++-+++-..+||..+
T Consensus 292 D~~~t~~~~gf~~~deYY------~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgf 365 (409)
T KOG1838|consen 292 DEALTRPMFGFKSVDEYY------KKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGF 365 (409)
T ss_pred HhhhhhhhcCCCcHHHHH------hhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeee
Confidence 333333333322222222 22333567889999999999999999998543 33455578887888888999988
Q ss_pred hhc----hhHHHHH-HHHhhhhc
Q 024971 228 VSL----YLSLSSA-CLHTLSYL 245 (260)
Q Consensus 228 ~~~----p~~~~~~-i~~~l~~~ 245 (260)
+|. +....+. +.+|+..+
T Consensus 366 leg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 366 LEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred eccCCCccchhHHHHHHHHHHHH
Confidence 876 2233333 66666443
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.1e-15 Score=110.13 Aligned_cols=231 Identities=15% Similarity=0.113 Sum_probs=131.2
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC-----ccc
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-----PEI 77 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~ 77 (260)
|+ |+.|+.+|+..-+...... ..++++++++.+.++++++|.+ ++++|+|+||..++.+++.. |++
T Consensus 127 l~-g~dVYl~DW~~p~~vp~~~-------~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~ 197 (406)
T TIGR01849 127 LP-DHDVYITDWVNARMVPLSA-------GKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQ 197 (406)
T ss_pred hC-CCcEEEEeCCCCCCCchhc-------CCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCC
Confidence 45 9999999999888654333 4679999999999999999877 99999999999977776654 667
Q ss_pred hhhceEeccCcccccc-CCCCCC-CcchhHHHhhhhhh------------hhhHHHH---HHHhcCh---HHHHHHHHhc
Q 024971 78 CRGMILLNISLRMLHI-KKQPWY-GRPLIRSFQNLLRN------------TAAGKLF---YKMVATS---ESVRNILCQC 137 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~------------~~~~~~~---~~~~~~~---~~~~~~~~~~ 137 (260)
+++++++++++..... ...... .......+...... ...+... +...... .....++...
T Consensus 198 ~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l 277 (406)
T TIGR01849 198 PRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHL 277 (406)
T ss_pred cceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHH
Confidence 9999999998765421 110000 00011111111100 0000000 0000111 1112222222
Q ss_pred cCCCCcccHHHH---HHHhccCCccchHHHHHHHHh----hhCC-------CCCCccCCCCC-CCEEEEecCCCCCCChH
Q 024971 138 YNDTSQVTEELV---EKILQPGLETGAADVFLEFIC----YSGG-------PLPEELLPQVK-CPVLIAWGDKDPWEPIE 202 (260)
Q Consensus 138 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~i~-~P~l~i~g~~D~~~~~~ 202 (260)
............ ..+.. ...-....+.+... .... ....-.+++|+ +|++.+.|++|.++++.
T Consensus 278 ~~gd~~~~~~~~~f~~~y~d--~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~ 355 (406)
T TIGR01849 278 VKGDGQEADKHRIFYDEYLA--VMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLG 355 (406)
T ss_pred hcCCcchHHHHHHHHHHhhh--ccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHH
Confidence 211111111111 11111 11111222222221 1110 01123567899 99999999999999999
Q ss_pred HHHHhhccC---C--CccEEEeCCCCCCcchh---chhHHHHHHHHhhhh
Q 024971 203 LGRAYGNFD---S--VEDFIVLPNVGHCPQVS---LYLSLSSACLHTLSY 244 (260)
Q Consensus 203 ~~~~~~~~~---~--~~~~~~~~~~gH~~~~~---~p~~~~~~i~~~l~~ 244 (260)
..+.+.+.. + +.+....+++||+..+- -++++...|.+||..
T Consensus 356 qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 356 QTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred HhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 988877753 4 23466777899986653 367788888888864
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.6e-14 Score=106.23 Aligned_cols=187 Identities=16% Similarity=0.156 Sum_probs=100.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.+|+.++++|.||.|.|...+- ..+.+.+...+.+.+... +.+++.++|.|+||.+|.++|..+++|+++
T Consensus 216 ~rGiA~LtvDmPG~G~s~~~~l-------~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~Rlka 288 (411)
T PF06500_consen 216 PRGIAMLTVDMPGQGESPKWPL-------TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKA 288 (411)
T ss_dssp HCT-EEEEE--TTSGGGTTT-S--------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SE
T ss_pred hCCCEEEEEccCCCcccccCCC-------CcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceee
Confidence 4899999999999999865431 122234455555555544 345899999999999999999999899999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|..+++.... +....... ..+......+...++.... +.+....-+.
T Consensus 289 vV~~Ga~vh~~------------ft~~~~~~-------------~~P~my~d~LA~rlG~~~~-~~~~l~~el~------ 336 (411)
T PF06500_consen 289 VVALGAPVHHF------------FTDPEWQQ-------------RVPDMYLDVLASRLGMAAV-SDESLRGELN------ 336 (411)
T ss_dssp EEEES---SCG------------GH-HHHHT-------------TS-HHHHHHHHHHCT-SCE--HHHHHHHGG------
T ss_pred EeeeCchHhhh------------hccHHHHh-------------cCCHHHHHHHHHHhCCccC-CHHHHHHHHH------
Confidence 99999874221 00000000 0111111122222221111 1111111111
Q ss_pred hHHHHHHHHhhhCCCCCCccC--CCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELL--PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
.+.-. ....+ .+.++|+|.+.|++|.++|.+..+.++....+.+...++... ....-+.-...+
T Consensus 337 ---------~~SLk--~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~---~~~gy~~al~~~ 402 (411)
T PF06500_consen 337 ---------KFSLK--TQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKP---LHMGYPQALDEI 402 (411)
T ss_dssp ---------GGSTT--TTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSS---HHHHHHHHHHHH
T ss_pred ---------hcCcc--hhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCc---cccchHHHHHHH
Confidence 11000 01233 677899999999999999999999998887777888887543 333344555666
Q ss_pred HHhhh
Q 024971 239 LHTLS 243 (260)
Q Consensus 239 ~~~l~ 243 (260)
.+||+
T Consensus 403 ~~Wl~ 407 (411)
T PF06500_consen 403 YKWLE 407 (411)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 67765
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=106.23 Aligned_cols=52 Identities=15% Similarity=0.189 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 37 ETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
+++...+....+.++.++++++||||||..|+.++.++|+++++++.+++..
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 4444445555555677889999999999999999999999999999999864
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.1e-14 Score=92.62 Aligned_cols=146 Identities=16% Similarity=0.140 Sum_probs=103.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
..||.++.+|+||-|.|.+... ....-.+-+..+.++++....+ .+.+.|+|+|+.|++.+|.+.|+ ....
T Consensus 58 ~~G~atlRfNfRgVG~S~G~fD------~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~ 130 (210)
T COG2945 58 KRGFATLRFNFRGVGRSQGEFD------NGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVF 130 (210)
T ss_pred hCCceEEeecccccccccCccc------CCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccce
Confidence 4699999999999999998763 2222222223333444443322 34688999999999999999986 4555
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
+.+.|++... .
T Consensus 131 is~~p~~~~~-------------------------------------------------------d-------------- 141 (210)
T COG2945 131 ISILPPINAY-------------------------------------------------------D-------------- 141 (210)
T ss_pred eeccCCCCch-------------------------------------------------------h--------------
Confidence 5555542100 0
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHh
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHT 241 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 241 (260)
...+....+|.++|+|+.|.+++......+++. ...+++++++++||.+- +-+.+.+.|.+|
T Consensus 142 ----------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~g-Kl~~l~~~i~~~ 203 (210)
T COG2945 142 ----------------FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHG-KLIELRDTIADF 203 (210)
T ss_pred ----------------hhhccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceecc-cHHHHHHHHHHH
Confidence 112344568999999999999998888877777 34688899999999875 457888888888
Q ss_pred hh
Q 024971 242 LS 243 (260)
Q Consensus 242 l~ 243 (260)
+.
T Consensus 204 l~ 205 (210)
T COG2945 204 LE 205 (210)
T ss_pred hh
Confidence 85
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-13 Score=100.72 Aligned_cols=84 Identities=15% Similarity=0.198 Sum_probs=58.4
Q ss_pred CccEEEEEcC--CCCCCCCCCCCCCC-------------CCCCCccHHH-HHHHHHHHHHh---hcCCceEEEEeChhhH
Q 024971 5 KSHRVYSIDL--IGYGYSDKPNPRDF-------------FDKPFYTFET-WASQLNDFCKD---VVKDQAFFICNSIGGL 65 (260)
Q Consensus 5 ~~~~v~~~D~--~G~G~S~~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~lvGhS~Gg~ 65 (260)
.|+.|+++|. +|+|.+........ .....++..+ +++++..+++. ++.++++++||||||.
T Consensus 71 ~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~ 150 (275)
T TIGR02821 71 HGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGH 150 (275)
T ss_pred cCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHH
Confidence 3899999998 55554321100000 0001233333 46778777776 3556899999999999
Q ss_pred HHHHHHhhCccchhhceEeccCc
Q 024971 66 VGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 66 ~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
+++.++.++|+.+++++++++..
T Consensus 151 ~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 151 GALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHhCcccceEEEEECCcc
Confidence 99999999999999999998874
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-13 Score=99.02 Aligned_cols=87 Identities=18% Similarity=0.247 Sum_probs=70.2
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC------CceEEEEeChhhHHHHHHHhhCc-
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEP- 75 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p- 75 (260)
|..++.|+++.+.||-.++...... .....++++++++...++++++-. .+++++|||.|+.++++++.+.+
T Consensus 29 l~~~~~i~~ish~Gh~~~~~~~~~~-~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~ 107 (266)
T PF10230_consen 29 LNPQFEILGISHAGHSTSPSNSKFS-PNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPD 107 (266)
T ss_pred CCCCCeeEEecCCCCcCCccccccc-CCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccc
Confidence 4578999999999998777652100 114689999999988888877632 47999999999999999999998
Q ss_pred --cchhhceEeccCccc
Q 024971 76 --EICRGMILLNISLRM 90 (260)
Q Consensus 76 --~~v~~lvl~~~~~~~ 90 (260)
.+|.+++++-|....
T Consensus 108 ~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 108 LKFRVKKVILLFPTIED 124 (266)
T ss_pred cCCceeEEEEeCCcccc
Confidence 789999999997643
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.1e-14 Score=102.12 Aligned_cols=217 Identities=15% Similarity=0.133 Sum_probs=125.0
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHH-----HHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA-----SQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
+.+|+.|+.+++++-..+.... ++++++ +.+..+.+..+.+++.++|||.||.++..+++.++.+
T Consensus 136 ~~~g~~vfvIsw~nPd~~~~~~----------~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k 205 (445)
T COG3243 136 LEQGLDVFVISWRNPDASLAAK----------NLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK 205 (445)
T ss_pred HHcCCceEEEeccCchHhhhhc----------cHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc
Confidence 4689999999999887776533 555555 4455555666788999999999999999999998887
Q ss_pred -hhhceEeccCccccccCCCCCCCcc-hhHHHhhh------hhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHH
Q 024971 78 -CRGMILLNISLRMLHIKKQPWYGRP-LIRSFQNL------LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELV 149 (260)
Q Consensus 78 -v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (260)
|++++++.+...+........+... ....+... +....+...|.......-....++...........-+..
T Consensus 206 ~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdll 285 (445)
T COG3243 206 RIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLL 285 (445)
T ss_pred ccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHH
Confidence 9999999988766543332222211 11111111 111111112211111112223444444444444443332
Q ss_pred HHHhccCCccc-hHHHH-HHHHhhh---CC----CCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeC
Q 024971 150 EKILQPGLETG-AADVF-LEFICYS---GG----PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP 220 (260)
Q Consensus 150 ~~~~~~~~~~~-~~~~~-~~~~~~~---~~----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 220 (260)
.........+. ....+ .+++... .. ....-.+.+|+||++.+.|++|.++|.+.....++.+++-...++-
T Consensus 286 yWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~ 365 (445)
T COG3243 286 YWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLS 365 (445)
T ss_pred HhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEe
Confidence 22222111111 11111 1222111 10 1112357899999999999999999999999888888873333444
Q ss_pred CCCCCcchh
Q 024971 221 NVGHCPQVS 229 (260)
Q Consensus 221 ~~gH~~~~~ 229 (260)
++||....-
T Consensus 366 ~sGHIa~vV 374 (445)
T COG3243 366 RSGHIAGVV 374 (445)
T ss_pred cCceEEEEe
Confidence 589975543
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.6e-13 Score=110.63 Aligned_cols=186 Identities=16% Similarity=0.124 Sum_probs=108.5
Q ss_pred CCccEEEEEcCCCCCCCCCC-CCCCCCCCCCccHHHHHHHHHHHHHhhcC---CceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGYGYSDKP-NPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
.+||.|+.++.||.+.-... ............++++.+.+. ++...+. +++.++|||+||.+++.++.+.| +++
T Consensus 421 ~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~ 498 (620)
T COG1506 421 SAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFK 498 (620)
T ss_pred cCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhh
Confidence 57999999999977542111 000000013456677777666 5555432 48999999999999999999988 677
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
+.+...+...... .... ....+............. ..+.
T Consensus 499 a~~~~~~~~~~~~----------------~~~~-------------~~~~~~~~~~~~~~~~~~-~~~~----------- 537 (620)
T COG1506 499 AAVAVAGGVDWLL----------------YFGE-------------STEGLRFDPEENGGGPPE-DREK----------- 537 (620)
T ss_pred eEEeccCcchhhh----------------hccc-------------cchhhcCCHHHhCCCccc-ChHH-----------
Confidence 7777766532110 0000 000000000000000000 0000
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCcch-hchhHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQV-SLYLSL 234 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~-~~p~~~ 234 (260)
+. ...+.....++++|+|+|||++|..++.+.+.++.+. ..+++++++|+.||.+.. ++...+
T Consensus 538 -----~~-------~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~ 605 (620)
T COG1506 538 -----YE-------DRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKV 605 (620)
T ss_pred -----HH-------hcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHH
Confidence 00 0111334678899999999999999998877765443 456799999999997665 344445
Q ss_pred HHHHHHhhhh
Q 024971 235 SSACLHTLSY 244 (260)
Q Consensus 235 ~~~i~~~l~~ 244 (260)
.+.+.+|++.
T Consensus 606 ~~~~~~~~~~ 615 (620)
T COG1506 606 LKEILDWFKR 615 (620)
T ss_pred HHHHHHHHHH
Confidence 5555555543
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3e-13 Score=96.00 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=45.0
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCcchhchhHHHHHHHHhh
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQVSLYLSLSSACLHTL 242 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l 242 (260)
++|+++++|++|.++|.+..+.+.+. ..++++++++++||.+..+.-+.+.+.+.+++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 58999999999999999887765554 23567888999999987666666666665555
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-13 Score=92.11 Aligned_cols=206 Identities=17% Similarity=0.228 Sum_probs=109.5
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHH-HHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWAS-QLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
++||.|..+|+||.|.|+..... ...+.+.|++. |+...++.+ ..-+.+.||||+||.+.-.+. +++ ++
T Consensus 55 ~~Gf~Vlt~dyRG~g~S~p~~~~----~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~ 128 (281)
T COG4757 55 KAGFEVLTFDYRGIGQSRPASLS----GSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KY 128 (281)
T ss_pred ccCceEEEEecccccCCCccccc----cCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-cc
Confidence 46999999999999999876632 24567777774 666666555 345899999999998766544 444 45
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHH--HHHHHhcChHHHHHHHHhccCCCCcccHH---HHHHHh
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK--LFYKMVATSESVRNILCQCYNDTSQVTEE---LVEKIL 153 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 153 (260)
.+....+...... .+.... ..+........... .+.+. .+.. ...+..+..+-. ..+.++
T Consensus 129 ~a~~vfG~gagws-----g~m~~~--~~l~~~~l~~lv~p~lt~w~g-----~~p~---~l~G~G~d~p~~v~RdW~Rwc 193 (281)
T COG4757 129 AAFAVFGSGAGWS-----GWMGLR--ERLGAVLLWNLVGPPLTFWKG-----YMPK---DLLGLGSDLPGTVMRDWARWC 193 (281)
T ss_pred ceeeEeccccccc-----cchhhh--hcccceeeccccccchhhccc-----cCcH---hhcCCCccCcchHHHHHHHHh
Confidence 5555554443211 010000 00000000000000 00000 0000 000111111111 111111
Q ss_pred ccCCc---cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEE--EeCC----CCC
Q 024971 154 QPGLE---TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFI--VLPN----VGH 224 (260)
Q Consensus 154 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~--~~~~----~gH 224 (260)
+.... ......+ .+..+++++|+..+...+|+.+|+...+.+....+|+.+. .++. .||
T Consensus 194 R~p~y~fddp~~~~~------------~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH 261 (281)
T COG4757 194 RHPRYYFDDPAMRNY------------RQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGH 261 (281)
T ss_pred cCccccccChhHhHH------------HHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccc
Confidence 11100 0000001 3455678899999999999999999998888877765443 3432 599
Q ss_pred Ccchhch-hHHHHHHHHhh
Q 024971 225 CPQVSLY-LSLSSACLHTL 242 (260)
Q Consensus 225 ~~~~~~p-~~~~~~i~~~l 242 (260)
+-..-+| |..-+...+|+
T Consensus 262 ~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 262 MGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hhhhccchHHHHHHHHHhh
Confidence 9887776 66666665554
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=104.10 Aligned_cols=79 Identities=14% Similarity=0.090 Sum_probs=64.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+|+||++|++|+|.|..+. .......+++++.++++.+ +.++++||||||||.+|..++.+.|++|
T Consensus 72 ~d~nVI~VDw~g~g~s~y~~-------a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV 144 (442)
T TIGR03230 72 PSANVIVVDWLSRAQQHYPT-------SAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKV 144 (442)
T ss_pred CCCEEEEEECCCcCCCCCcc-------ccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcce
Confidence 36999999999999887654 1233466777777777765 3579999999999999999999999999
Q ss_pred hhceEeccCccc
Q 024971 79 RGMILLNISLRM 90 (260)
Q Consensus 79 ~~lvl~~~~~~~ 90 (260)
.++++++|+.+.
T Consensus 145 ~rItgLDPAgP~ 156 (442)
T TIGR03230 145 NRITGLDPAGPT 156 (442)
T ss_pred eEEEEEcCCCCc
Confidence 999999997543
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.7e-13 Score=97.72 Aligned_cols=77 Identities=13% Similarity=-0.000 Sum_probs=51.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh-------hcCCceEEEEeChhhHHHHHHHhhCcc-
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-------VVKDQAFFICNSIGGLVGLQAAVMEPE- 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~- 76 (260)
.||.|+++|++|++.+.... ...+..+..+.+.+.++. .+.++++++|||+||.+++.+|..+++
T Consensus 78 ~G~~VvapD~~g~~~~~~~~-------~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~ 150 (313)
T PLN00021 78 HGFIVVAPQLYTLAGPDGTD-------EIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAV 150 (313)
T ss_pred CCCEEEEecCCCcCCCCchh-------hHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccc
Confidence 58999999999975432211 111223333333332222 234689999999999999999998874
Q ss_pred ----chhhceEeccCc
Q 024971 77 ----ICRGMILLNISL 88 (260)
Q Consensus 77 ----~v~~lvl~~~~~ 88 (260)
+++++|+++|..
T Consensus 151 ~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 151 SLPLKFSALIGLDPVD 166 (313)
T ss_pred ccccceeeEEeecccc
Confidence 578899998863
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5e-12 Score=103.58 Aligned_cols=78 Identities=14% Similarity=-0.051 Sum_probs=60.7
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc--------------------CCceEEEEeCh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--------------------KDQAFFICNSI 62 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~lvGhS~ 62 (260)
+++||.|+.+|.||+|.|++... ... .+-.+|..++|+.+. ..++.++|.|+
T Consensus 276 ~~rGYaVV~~D~RGtg~SeG~~~-------~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 276 LPRGFAVVYVSGIGTRGSDGCPT-------TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HhCCeEEEEEcCCCCCCCCCcCc-------cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 36799999999999999998641 122 334555555555553 35899999999
Q ss_pred hhHHHHHHHhhCccchhhceEeccCc
Q 024971 63 GGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 63 Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
||.+++.+|...|+.++++|..++..
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 99999999999888899999887764
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-11 Score=88.46 Aligned_cols=77 Identities=22% Similarity=0.287 Sum_probs=61.8
Q ss_pred CCCc-cEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCC-ceEEEEeChhhHHHHHHHhhC---ccc
Q 024971 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVME---PEI 77 (260)
Q Consensus 3 L~~~-~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lvGhS~Gg~~a~~~a~~~---p~~ 77 (260)
|... +.|+.++.+|.+.... ...+++++++...+.|.....+ +++|+|||+||.+|+.+|.+- ...
T Consensus 23 l~~~~~~v~~i~~~~~~~~~~---------~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~ 93 (229)
T PF00975_consen 23 LPDDVIGVYGIEYPGRGDDEP---------PPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEE 93 (229)
T ss_dssp HTTTEEEEEEECSTTSCTTSH---------EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-S
T ss_pred CCCCeEEEEEEecCCCCCCCC---------CCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhc
Confidence 4554 8999999999983333 3469999999998888877655 999999999999999999764 234
Q ss_pred hhhceEeccCc
Q 024971 78 CRGMILLNISL 88 (260)
Q Consensus 78 v~~lvl~~~~~ 88 (260)
+..++++++.+
T Consensus 94 v~~l~liD~~~ 104 (229)
T PF00975_consen 94 VSRLILIDSPP 104 (229)
T ss_dssp ESEEEEESCSS
T ss_pred cCceEEecCCC
Confidence 88999999754
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-12 Score=92.67 Aligned_cols=154 Identities=21% Similarity=0.205 Sum_probs=89.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCcc--------HHHHHHHHHHHHHhhc------CCceEEEEeChhhHHHHH
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYT--------FETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQ 69 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~------~~~~~lvGhS~Gg~~a~~ 69 (260)
++||.|+++|+-+-......... ..... .+...+++.+.++.+. .+++.++|+||||.+++.
T Consensus 39 ~~Gy~v~~pD~f~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~ 114 (218)
T PF01738_consen 39 EEGYVVLAPDLFGGRGAPPSDPE----EAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALL 114 (218)
T ss_dssp HTT-EEEEE-CCCCTS--CCCHH----CHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHH
T ss_pred hcCCCEEecccccCCCCCccchh----hHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhh
Confidence 36999999998654441111100 00011 2345566666666652 358999999999999999
Q ss_pred HHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHH
Q 024971 70 AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELV 149 (260)
Q Consensus 70 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (260)
+|.+. +.+++.|..-|..... ..
T Consensus 115 ~a~~~-~~~~a~v~~yg~~~~~-------------------------------------------------------~~- 137 (218)
T PF01738_consen 115 LAARD-PRVDAAVSFYGGSPPP-------------------------------------------------------PP- 137 (218)
T ss_dssp HHCCT-TTSSEEEEES-SSSGG-------------------------------------------------------GH-
T ss_pred hhhhc-cccceEEEEcCCCCCC-------------------------------------------------------cc-
Confidence 99887 5688888776610000 00
Q ss_pred HHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHH----hhccCCCccEEEeCCCCCC
Q 024971 150 EKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHC 225 (260)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~----~~~~~~~~~~~~~~~~gH~ 225 (260)
.....++++|+++++|++|+.++.+..+. +.+.....++++++|++|-
T Consensus 138 ----------------------------~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~Hg 189 (218)
T PF01738_consen 138 ----------------------------LEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHG 189 (218)
T ss_dssp ----------------------------HHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TT
T ss_pred ----------------------------hhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCccc
Confidence 12345678999999999999999886444 4344567899999999996
Q ss_pred cchh-----chhHHHHHHHHhhhhcc
Q 024971 226 PQVS-----LYLSLSSACLHTLSYLH 246 (260)
Q Consensus 226 ~~~~-----~p~~~~~~i~~~l~~~~ 246 (260)
+... +++...+...+.+++++
T Consensus 190 F~~~~~~~~~~~aa~~a~~~~~~ff~ 215 (218)
T PF01738_consen 190 FANPSRPPYDPAAAEDAWQRTLAFFK 215 (218)
T ss_dssp TTSTTSTT--HHHHHHHHHHHHHHHC
T ss_pred ccCCCCcccCHHHHHHHHHHHHHHHH
Confidence 5543 23444445555455444
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.8e-12 Score=89.18 Aligned_cols=122 Identities=25% Similarity=0.276 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHhh-----cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhh
Q 024971 36 FETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNL 110 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (260)
++..++.+.++++.. ..+++++.|.|.||++|+.++.++|+.+.++|.+++......
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~------------------ 144 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES------------------ 144 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc------------------
Confidence 344444555555543 345899999999999999999999999999999998632100
Q ss_pred hhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEE
Q 024971 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLI 190 (260)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 190 (260)
.. . .. ..... ++|+++
T Consensus 145 --------------------------------~~-~----------------------------~~-~~~~~--~~pi~~ 160 (216)
T PF02230_consen 145 --------------------------------EL-E----------------------------DR-PEALA--KTPILI 160 (216)
T ss_dssp --------------------------------CC-H----------------------------CC-HCCCC--TS-EEE
T ss_pred --------------------------------cc-c----------------------------cc-ccccC--CCcEEE
Confidence 00 0 00 01111 699999
Q ss_pred EecCCCCCCChHHHHH----hhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhh
Q 024971 191 AWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 191 i~g~~D~~~~~~~~~~----~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~ 243 (260)
++|++|.++|.+..+. +.+...+++++.+++.||.+.. +..+.+.+||+
T Consensus 161 ~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~----~~~~~~~~~l~ 213 (216)
T PF02230_consen 161 IHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISP----EELRDLREFLE 213 (216)
T ss_dssp EEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--H----HHHHHHHHHHH
T ss_pred EecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH----HHHHHHHHHHh
Confidence 9999999999886655 4444556899999999998864 33444556664
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.3e-12 Score=100.96 Aligned_cols=79 Identities=20% Similarity=0.120 Sum_probs=64.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-----CceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
++||.|+++|+||+|.|+... ...+ ...++|+.++++.+.. .++.++|||+||.+++.+|..+|+++
T Consensus 51 ~~Gy~vv~~D~RG~g~S~g~~-------~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l 122 (550)
T TIGR00976 51 AQGYAVVIQDTRGRGASEGEF-------DLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPAL 122 (550)
T ss_pred hCCcEEEEEeccccccCCCce-------EecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCce
Confidence 679999999999999998754 1222 4567777777776632 48999999999999999999999999
Q ss_pred hhceEeccCccc
Q 024971 79 RGMILLNISLRM 90 (260)
Q Consensus 79 ~~lvl~~~~~~~ 90 (260)
+++|..++....
T Consensus 123 ~aiv~~~~~~d~ 134 (550)
T TIGR00976 123 RAIAPQEGVWDL 134 (550)
T ss_pred eEEeecCcccch
Confidence 999998887544
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.5e-12 Score=88.63 Aligned_cols=84 Identities=10% Similarity=-0.014 Sum_probs=54.0
Q ss_pred CccEEEEEcCCCCCCCCCCCCCC-CC--CCCCccHHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCccchh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRD-FF--DKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
.||.|+++|.+|++.+....... .. ........++.+.+..+.+..+. ++++++|||+||.+++.++.++|+.+.
T Consensus 42 ~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~ 121 (212)
T TIGR01840 42 YGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFA 121 (212)
T ss_pred CCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhhe
Confidence 58999999999998654211000 00 00011122222222233333333 589999999999999999999999999
Q ss_pred hceEeccCc
Q 024971 80 GMILLNISL 88 (260)
Q Consensus 80 ~lvl~~~~~ 88 (260)
+++.+++..
T Consensus 122 ~~~~~~g~~ 130 (212)
T TIGR01840 122 GGASNAGLP 130 (212)
T ss_pred EEEeecCCc
Confidence 999888764
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.9e-12 Score=86.74 Aligned_cols=123 Identities=16% Similarity=0.242 Sum_probs=83.0
Q ss_pred ccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHH-hhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhh
Q 024971 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAA-VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLR 112 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (260)
.+.+++.+.+.+.+.... +++++||||+|+..+++++ .....+|.|++|++|+-........+
T Consensus 37 P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~--------------- 100 (171)
T PF06821_consen 37 PDLDEWVQALDQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPP--------------- 100 (171)
T ss_dssp --HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTC---------------
T ss_pred CCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhh---------------
Confidence 467888888888777664 5699999999999999999 77778899999999973210000000
Q ss_pred hhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEe
Q 024971 113 NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAW 192 (260)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 192 (260)
.. ..........+.+|.+++.
T Consensus 101 ------------------------------~~-----------------------------~~f~~~p~~~l~~~~~via 121 (171)
T PF06821_consen 101 ------------------------------EL-----------------------------DGFTPLPRDPLPFPSIVIA 121 (171)
T ss_dssp ------------------------------GG-----------------------------CCCTTSHCCHHHCCEEEEE
T ss_pred ------------------------------hc-----------------------------cccccCcccccCCCeEEEE
Confidence 00 0000111233457779999
Q ss_pred cCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchh
Q 024971 193 GDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 193 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~ 232 (260)
+++|+++|.+.++.+++.+. ++++.++++||+.-.+.-.
T Consensus 122 S~nDp~vp~~~a~~~A~~l~-a~~~~~~~~GHf~~~~G~~ 160 (171)
T PF06821_consen 122 SDNDPYVPFERAQRLAQRLG-AELIILGGGGHFNAASGFG 160 (171)
T ss_dssp ETTBSSS-HHHHHHHHHHHT--EEEEETS-TTSSGGGTHS
T ss_pred cCCCCccCHHHHHHHHHHcC-CCeEECCCCCCcccccCCC
Confidence 99999999999999998874 7899999999998765433
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.8e-12 Score=91.04 Aligned_cols=75 Identities=9% Similarity=0.050 Sum_probs=46.9
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh--------cCCceEEEEeChhhHHHHHHHhhCc-
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV--------VKDQAFFICNSIGGLVGLQAAVMEP- 75 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~lvGhS~Gg~~a~~~a~~~p- 75 (260)
.+|.|+-+-++..... -...+++.-++||.++++.+ +.++++|+|||.|+.-+++|+....
T Consensus 62 ~~wsl~q~~LsSSy~G----------~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~ 131 (303)
T PF08538_consen 62 TGWSLFQVQLSSSYSG----------WGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNP 131 (303)
T ss_dssp TT-EEEEE--GGGBTT----------S-S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT
T ss_pred CCeEEEEEEecCccCC----------cCcchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCc
Confidence 4788888776531111 12336777788777777655 2458999999999999999987642
Q ss_pred ----cchhhceEeccCcc
Q 024971 76 ----EICRGMILLNISLR 89 (260)
Q Consensus 76 ----~~v~~lvl~~~~~~ 89 (260)
..|+++|+-+|...
T Consensus 132 ~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 132 SPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp ---CCCEEEEEEEEE---
T ss_pred cccccceEEEEEeCCCCC
Confidence 56999999999754
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.8e-11 Score=86.52 Aligned_cols=192 Identities=20% Similarity=0.161 Sum_probs=97.4
Q ss_pred CCccEEEEEcCCCCCC-CCCCCCCC-----------CCC-CCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhh
Q 024971 4 AKSHRVYSIDLIGYGY-SDKPNPRD-----------FFD-KPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGG 64 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~-S~~~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg 64 (260)
+.||.|+++|.||+|. |....... ... .+.+-+..+..|....++.+ +.+++.+.|.|+||
T Consensus 107 ~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG 186 (320)
T PF05448_consen 107 AAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGG 186 (320)
T ss_dssp HTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHH
T ss_pred cCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCch
Confidence 3689999999999993 32111000 001 12233444555655555544 23589999999999
Q ss_pred HHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcc
Q 024971 65 LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV 144 (260)
Q Consensus 65 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (260)
.+++.+|+..| +|++++...|..... ...+....... ....+..++...- .....
T Consensus 187 ~lal~~aaLd~-rv~~~~~~vP~l~d~------------~~~~~~~~~~~-----------~y~~~~~~~~~~d-~~~~~ 241 (320)
T PF05448_consen 187 GLALAAAALDP-RVKAAAADVPFLCDF------------RRALELRADEG-----------PYPEIRRYFRWRD-PHHER 241 (320)
T ss_dssp HHHHHHHHHSS-T-SEEEEESESSSSH------------HHHHHHT--ST-----------TTHHHHHHHHHHS-CTHCH
T ss_pred HHHHHHHHhCc-cccEEEecCCCccch------------hhhhhcCCccc-----------cHHHHHHHHhccC-CCccc
Confidence 99999999886 699999888864210 00000000000 0011111111000 00000
Q ss_pred cHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEEeCCCC
Q 024971 145 TEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVG 223 (260)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~g 223 (260)
.++. .....+ .+.....++|+||+++-.|-.|.++|+...-...+.++ ..++.+++..|
T Consensus 242 ~~~v-----------------~~~L~Y---~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~ 301 (320)
T PF05448_consen 242 EPEV-----------------FETLSY---FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYG 301 (320)
T ss_dssp HHHH-----------------HHHHHT---T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--
T ss_pred HHHH-----------------HHHHhh---hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcC
Confidence 0111 111111 11133456789999999999999999999988877754 57899999999
Q ss_pred CCcchhchhHHHHHHHHhhh
Q 024971 224 HCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 224 H~~~~~~p~~~~~~i~~~l~ 243 (260)
|....+. -.+...+|+.
T Consensus 302 He~~~~~---~~~~~~~~l~ 318 (320)
T PF05448_consen 302 HEYGPEF---QEDKQLNFLK 318 (320)
T ss_dssp SSTTHHH---HHHHHHHHHH
T ss_pred CCchhhH---HHHHHHHHHh
Confidence 9765432 1344445543
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.5e-12 Score=92.68 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=60.5
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+|+|+++|++|++.+..+. ...+...+.+++..+++.+ +.+++++|||||||.+|..++.++|++|
T Consensus 65 ~~~nVi~vD~~~~~~~~y~~-------a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v 137 (275)
T cd00707 65 GDYNVIVVDWGRGANPNYPQ-------AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKL 137 (275)
T ss_pred CCCEEEEEECccccccChHH-------HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCcc
Confidence 47999999999984332211 2335555666666666654 3468999999999999999999999999
Q ss_pred hhceEeccCccc
Q 024971 79 RGMILLNISLRM 90 (260)
Q Consensus 79 ~~lvl~~~~~~~ 90 (260)
.++++++|+...
T Consensus 138 ~~iv~LDPa~p~ 149 (275)
T cd00707 138 GRITGLDPAGPL 149 (275)
T ss_pred ceeEEecCCccc
Confidence 999999997543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-10 Score=87.19 Aligned_cols=242 Identities=14% Similarity=0.110 Sum_probs=133.2
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCC---CCCCccHHHHHH-HHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCcc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFF---DKPFYTFETWAS-QLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~ 76 (260)
+||+|+.-+.||--.|......... .-..+++.+++. |+-+.++.. +.++++.+|||.|+.....++...|+
T Consensus 105 aGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~ 184 (403)
T KOG2624|consen 105 AGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPE 184 (403)
T ss_pred cCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccch
Confidence 6999999999998777654322211 123567777664 665555554 67899999999999999999888775
Q ss_pred ---chhhceEeccCccccccCCCC-CCCcch---hHHHh------hhhhhhhhHHHHHHHhcChH-HHHHHHH----hcc
Q 024971 77 ---ICRGMILLNISLRMLHIKKQP-WYGRPL---IRSFQ------NLLRNTAAGKLFYKMVATSE-SVRNILC----QCY 138 (260)
Q Consensus 77 ---~v~~lvl~~~~~~~~~~~~~~-~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~ 138 (260)
+|+.+++++|........... ...... ...+. .++........+....+... .....+. ...
T Consensus 185 ~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~ 264 (403)
T KOG2624|consen 185 YNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLV 264 (403)
T ss_pred hhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHc
Confidence 799999999987332100000 000000 00011 11111111122222222211 1111111 111
Q ss_pred CCCC-cccHHHHHHHhccCCccchHHHHHHHH--------------------hhhCCCCCCccCCCCCCCEEEEecCCCC
Q 024971 139 NDTS-QVTEELVEKILQPGLETGAADVFLEFI--------------------CYSGGPLPEELLPQVKCPVLIAWGDKDP 197 (260)
Q Consensus 139 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~i~~P~l~i~g~~D~ 197 (260)
+... .........+........+......+. .+.....+...+.++++|+.+.+|++|.
T Consensus 265 G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~ 344 (403)
T KOG2624|consen 265 GWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDW 344 (403)
T ss_pred CcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcc
Confidence 1110 011111111111111122222222222 2222333455677889999999999999
Q ss_pred CCChHHHHHhhccCCCccEEE---eCCCCCCcc---hhchhHHHHHHHHhhhhcc
Q 024971 198 WEPIELGRAYGNFDSVEDFIV---LPNVGHCPQ---VSLYLSLSSACLHTLSYLH 246 (260)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~---~~~~gH~~~---~~~p~~~~~~i~~~l~~~~ 246 (260)
++.++..+.+....+++.... +++-.|+-+ .+.++++.+.|.+.++...
T Consensus 345 l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 345 LADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred cCCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 999999987666655544322 788899644 3568999999988887654
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.5e-10 Score=75.18 Aligned_cols=137 Identities=14% Similarity=0.103 Sum_probs=95.5
Q ss_pred CCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhh
Q 024971 32 PFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLL 111 (260)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (260)
.....++|++.+.+.+... .++++||+||+|+..+++++.+....|.|+++++|+-... +..
T Consensus 39 ~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~----------~~~------- 100 (181)
T COG3545 39 EAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSR----------PEI------- 100 (181)
T ss_pred CCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccc----------ccc-------
Confidence 3457888888888888877 4679999999999999999988777899999999963110 000
Q ss_pred hhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEE
Q 024971 112 RNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIA 191 (260)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 191 (260)
...... ... .....++.-|.+++
T Consensus 101 ---------------------------------~~~~~~-----------------------tf~-~~p~~~lpfps~vv 123 (181)
T COG3545 101 ---------------------------------RPKHLM-----------------------TFD-PIPREPLPFPSVVV 123 (181)
T ss_pred ---------------------------------chhhcc-----------------------ccC-CCccccCCCceeEE
Confidence 000000 000 12233456899999
Q ss_pred ecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchh---chhHHHHHHHHhhhh
Q 024971 192 WGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS---LYLSLSSACLHTLSY 244 (260)
Q Consensus 192 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~p~~~~~~i~~~l~~ 244 (260)
..++|++++.+.++.+++..+ +.++.+..+||+--.+ .-.+....+.+++..
T Consensus 124 aSrnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 124 ASRNDPYVSYEHAEDLANAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred EecCCCCCCHHHHHHHHHhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 999999999999999999877 5677788889975433 334445555555543
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.2e-11 Score=81.03 Aligned_cols=115 Identities=21% Similarity=0.234 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhh
Q 024971 36 FETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN 113 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (260)
.+.+++.+..+.++.+. ++++++|+|-||.+++.+..++|+.+++++++++.......
T Consensus 80 ~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~-------------------- 139 (207)
T COG0400 80 TEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE-------------------- 139 (207)
T ss_pred HHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc--------------------
Confidence 33444445555556666 68999999999999999999999999999999987432100
Q ss_pred hhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEec
Q 024971 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWG 193 (260)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 193 (260)
....+ -..|+++++|
T Consensus 140 ---------------------------------------------------------------~~~~~--~~~pill~hG 154 (207)
T COG0400 140 ---------------------------------------------------------------LLPDL--AGTPILLSHG 154 (207)
T ss_pred ---------------------------------------------------------------ccccc--CCCeEEEecc
Confidence 01112 2489999999
Q ss_pred CCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCcchhchhHHHH
Q 024971 194 DKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 194 ~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
+.|+++|.....++.+. .-+++...++ .||.+..+.-+++.+
T Consensus 155 ~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~ 200 (207)
T COG0400 155 TEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPEELEAARS 200 (207)
T ss_pred CcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHH
Confidence 99999998877665543 4567888888 799887655444444
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.2e-10 Score=84.37 Aligned_cols=75 Identities=24% Similarity=0.325 Sum_probs=68.7
Q ss_pred cEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEecc
Q 024971 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (260)
Q Consensus 7 ~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 86 (260)
|.||++.+||+|.|+.+. ...++....|..+..++=.+|.+++++-|..||+.|+..+|..+|++|.|+-+-.+
T Consensus 189 FEVI~PSlPGygwSd~~s------k~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPS------KTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred EEEeccCCCCcccCcCCc------cCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 899999999999999988 46788899999999999999999999999999999999999999999998876555
Q ss_pred C
Q 024971 87 S 87 (260)
Q Consensus 87 ~ 87 (260)
.
T Consensus 263 ~ 263 (469)
T KOG2565|consen 263 F 263 (469)
T ss_pred c
Confidence 4
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.9e-10 Score=77.11 Aligned_cols=55 Identities=20% Similarity=0.201 Sum_probs=44.5
Q ss_pred CccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccc
Q 024971 33 FYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRM 90 (260)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 90 (260)
..+.++..+.+.++++....+.+.|||.||||..|..+|.+++ +++ |+++|+..+
T Consensus 39 ~~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 39 PPFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred CcCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 3456667778888888887777999999999999999999886 444 999998643
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.1e-09 Score=80.27 Aligned_cols=77 Identities=16% Similarity=0.109 Sum_probs=51.5
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhC------cc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVME------PE 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~------p~ 76 (260)
.|+.|+++|+|.......+. ...+..+..+.+.+..+.++. ++++++|+|+||.+++.++.+. +.
T Consensus 111 ~g~~Vv~vdYrlape~~~p~-------~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~ 183 (318)
T PRK10162 111 SGCTVIGIDYTLSPEARFPQ-------AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCG 183 (318)
T ss_pred cCCEEEEecCCCCCCCCCCC-------cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCcc
Confidence 38999999999754432221 112222333334444445554 5899999999999999988653 35
Q ss_pred chhhceEeccCc
Q 024971 77 ICRGMILLNISL 88 (260)
Q Consensus 77 ~v~~lvl~~~~~ 88 (260)
++.+++++.|..
T Consensus 184 ~~~~~vl~~p~~ 195 (318)
T PRK10162 184 KVAGVLLWYGLY 195 (318)
T ss_pred ChhheEEECCcc
Confidence 689999998864
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.5e-10 Score=89.84 Aligned_cols=196 Identities=13% Similarity=0.118 Sum_probs=112.5
Q ss_pred CCCccEEEEEcCCCCCCCCCCCC-CCCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNP-RDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+++||.|+.++.||-|.-...-. .........+++|+++.+..+++.- ..+++.+.|.|.||.++..++.++|++++
T Consensus 471 ~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~ 550 (686)
T PRK10115 471 LDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFH 550 (686)
T ss_pred HHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhhee
Confidence 46899999999999765432110 0000013357777777766666552 23589999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|...|.......... ........ .+ ..+++.. .++..+.+
T Consensus 551 A~v~~vp~~D~~~~~~~---------------~~~p~~~~---------~~-----~e~G~p~--~~~~~~~l------- 592 (686)
T PRK10115 551 GVIAQVPFVDVVTTMLD---------------ESIPLTTG---------EF-----EEWGNPQ--DPQYYEYM------- 592 (686)
T ss_pred EEEecCCchhHhhhccc---------------CCCCCChh---------HH-----HHhCCCC--CHHHHHHH-------
Confidence 99999887543211000 00000000 00 0011110 01111110
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCC-EEEEecCCCCCCChHHHHHhhc----cCCCccEEEe---CCCCCCcch---
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCP-VLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVL---PNVGHCPQV--- 228 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~----~~~~~~~~~~---~~~gH~~~~--- 228 (260)
....+...+.+++.| +|+++|.+|..+|+.....+.. .....+++++ +++||....
T Consensus 593 -------------~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~ 659 (686)
T PRK10115 593 -------------KSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRF 659 (686)
T ss_pred -------------HHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHH
Confidence 011223456677899 5677999999998876665443 3344677777 899998432
Q ss_pred hchhHHHHHHHHhhhhccccc
Q 024971 229 SLYLSLSSACLHTLSYLHTCR 249 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~~~~~~ 249 (260)
+.-++.+..+.-.+..++.|.
T Consensus 660 ~~~~~~A~~~aFl~~~~~~~~ 680 (686)
T PRK10115 660 KSYEGVAMEYAFLIALAQGTL 680 (686)
T ss_pred HHHHHHHHHHHHHHHHhCCcC
Confidence 233344444443445555553
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.4e-10 Score=78.68 Aligned_cols=190 Identities=21% Similarity=0.191 Sum_probs=108.8
Q ss_pred CCccEEEEEcCCCCCCCCCC---CCCC---CC-------C-CCCccHHHHHHHHHHHHHhh------cCCceEEEEeChh
Q 024971 4 AKSHRVYSIDLIGYGYSDKP---NPRD---FF-------D-KPFYTFETWASQLNDFCKDV------VKDQAFFICNSIG 63 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~---~~~~---~~-------~-~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~G 63 (260)
..||.|+..|-||.|.|... .+.. .+ + .+.+-+.....|+..+++.+ ..+++.+.|.|.|
T Consensus 107 ~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqG 186 (321)
T COG3458 107 VAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQG 186 (321)
T ss_pred ccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccC
Confidence 46999999999999988431 1111 00 1 23333444455555555444 3468999999999
Q ss_pred hHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCc
Q 024971 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ 143 (260)
Q Consensus 64 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (260)
|.+++.+++..| ++++++.+-|...-. .+ .+ .+.... .-..+..+++.. ..
T Consensus 187 Gglalaaaal~~-rik~~~~~~Pfl~df--------~r----~i-~~~~~~-----------~ydei~~y~k~h----~~ 237 (321)
T COG3458 187 GGLALAAAALDP-RIKAVVADYPFLSDF--------PR----AI-ELATEG-----------PYDEIQTYFKRH----DP 237 (321)
T ss_pred chhhhhhhhcCh-hhhcccccccccccc--------hh----he-eecccC-----------cHHHHHHHHHhc----Cc
Confidence 999999998876 799999888764221 00 00 000000 000111111110 00
Q ss_pred ccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCC
Q 024971 144 VTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNV 222 (260)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~ 222 (260)
...+..+.+ .+. +......++++|+|+..|-.|.++|+...-...+.++. .++.+++.-
T Consensus 238 ~e~~v~~TL-----------------~yf---D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~ 297 (321)
T COG3458 238 KEAEVFETL-----------------SYF---DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYF 297 (321)
T ss_pred hHHHHHHHH-----------------hhh---hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeecc
Confidence 001111110 110 11234467899999999999999999988887777554 567778876
Q ss_pred CCCcchhchhHHHHHHHHhhhhc
Q 024971 223 GHCPQVSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 223 gH~~~~~~p~~~~~~i~~~l~~~ 245 (260)
+|.-. |.-..+.+..|++.+
T Consensus 298 aHe~~---p~~~~~~~~~~l~~l 317 (321)
T COG3458 298 AHEGG---PGFQSRQQVHFLKIL 317 (321)
T ss_pred ccccC---cchhHHHHHHHHHhh
Confidence 67543 344445555666544
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.4e-10 Score=100.06 Aligned_cols=78 Identities=13% Similarity=0.017 Sum_probs=65.8
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhh---Cccc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVM---EPEI 77 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~---~p~~ 77 (260)
.|+.+++|+++|+||+|.+.. ..++++++++++.+.++.+.. .+++++||||||.+|..+|.+ .+++
T Consensus 1090 ~l~~~~~v~~~~~~g~~~~~~---------~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~ 1160 (1296)
T PRK10252 1090 YLDPQWSIYGIQSPRPDGPMQ---------TATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEE 1160 (1296)
T ss_pred hcCCCCcEEEEECCCCCCCCC---------CCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCc
Confidence 467889999999999986632 357999999999999988754 489999999999999999985 4678
Q ss_pred hhhceEeccCc
Q 024971 78 CRGMILLNISL 88 (260)
Q Consensus 78 v~~lvl~~~~~ 88 (260)
+..++++++..
T Consensus 1161 v~~l~l~~~~~ 1171 (1296)
T PRK10252 1161 VAFLGLLDTWP 1171 (1296)
T ss_pred eeEEEEecCCC
Confidence 99999998743
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.5e-09 Score=82.49 Aligned_cols=82 Identities=16% Similarity=0.087 Sum_probs=60.1
Q ss_pred CCccEEEEEcCC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHhhC-
Q 024971 4 AKSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVME- 74 (260)
Q Consensus 4 ~~~~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~- 74 (260)
.+...++.+|.| |+|.|..... ....+.++.++|+.++++.+ +..+++|+|||+||..+..+|.+.
T Consensus 119 ~~~~~~l~iDqP~G~G~S~~~~~-----~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~ 193 (462)
T PTZ00472 119 NNEAYVIYVDQPAGVGFSYADKA-----DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRIN 193 (462)
T ss_pred ccccCeEEEeCCCCcCcccCCCC-----CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHH
Confidence 355789999986 9998876432 12345678888888888754 347899999999999998887652
Q ss_pred ---------ccchhhceEeccCccc
Q 024971 75 ---------PEICRGMILLNISLRM 90 (260)
Q Consensus 75 ---------p~~v~~lvl~~~~~~~ 90 (260)
+-.++|+++-++...+
T Consensus 194 ~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 194 MGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred hhccccCCceeeeEEEEEeccccCh
Confidence 1137888888887644
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.5e-11 Score=87.34 Aligned_cols=80 Identities=16% Similarity=0.045 Sum_probs=58.0
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-----CceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
++||.|+..|.||.|.|++... .. ...-++|..++|+-+.. .+|-++|.|++|..++.+|...|..+
T Consensus 55 ~~GY~vV~~D~RG~g~S~G~~~-------~~-~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~L 126 (272)
T PF02129_consen 55 ERGYAVVVQDVRGTGGSEGEFD-------PM-SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHL 126 (272)
T ss_dssp HTT-EEEEEE-TTSTTS-S-B--------TT-SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTE
T ss_pred hCCCEEEEECCcccccCCCccc-------cC-ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCc
Confidence 5799999999999999998652 11 45566666666666522 37999999999999999999888889
Q ss_pred hhceEeccCcccc
Q 024971 79 RGMILLNISLRML 91 (260)
Q Consensus 79 ~~lvl~~~~~~~~ 91 (260)
++++...+.....
T Consensus 127 kAi~p~~~~~d~~ 139 (272)
T PF02129_consen 127 KAIVPQSGWSDLY 139 (272)
T ss_dssp EEEEEESE-SBTC
T ss_pred eEEEecccCCccc
Confidence 9999888765443
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.2e-10 Score=78.30 Aligned_cols=139 Identities=18% Similarity=0.177 Sum_probs=95.0
Q ss_pred CCccEEEEEcCCCC-CCCCCCCCC--CCCC--CCCccHHHHHHHHHHHHHhhc------CCceEEEEeChhhHHHHHHHh
Q 024971 4 AKSHRVYSIDLIGY-GYSDKPNPR--DFFD--KPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 4 ~~~~~v~~~D~~G~-G~S~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~lvGhS~Gg~~a~~~a~ 72 (260)
..||.|+++|+-+. |.+...... .... ....+..+...|+.+.++.+. .+++.++|.||||.+++.++.
T Consensus 52 ~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~ 131 (236)
T COG0412 52 KAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAAT 131 (236)
T ss_pred hCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhc
Confidence 36999999998874 333222200 0000 011233677778887777773 356999999999999999999
Q ss_pred hCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHH
Q 024971 73 MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (260)
Q Consensus 73 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (260)
+.| .|++.+..-+.....
T Consensus 132 ~~~-~v~a~v~fyg~~~~~------------------------------------------------------------- 149 (236)
T COG0412 132 RAP-EVKAAVAFYGGLIAD------------------------------------------------------------- 149 (236)
T ss_pred ccC-CccEEEEecCCCCCC-------------------------------------------------------------
Confidence 887 688887776642110
Q ss_pred hccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCcch
Q 024971 153 LQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~ 228 (260)
......++++|+++..|+.|..+|......+.+. ....++.+++++.|-++.
T Consensus 150 ------------------------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~ 205 (236)
T COG0412 150 ------------------------DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFAN 205 (236)
T ss_pred ------------------------cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCcccccc
Confidence 0112457889999999999999998766655443 235778999998896653
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.2e-11 Score=83.24 Aligned_cols=51 Identities=20% Similarity=0.120 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccc
Q 024971 39 WASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRM 90 (260)
Q Consensus 39 ~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 90 (260)
+.+...++++.. ..+++.|+|.|.||-+|+.+|..+| .|+++|.++|....
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 444555555554 2358999999999999999999999 69999999987543
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-08 Score=78.07 Aligned_cols=60 Identities=22% Similarity=0.325 Sum_probs=49.0
Q ss_pred CCccHHHHHHHHHHHHHhh-----cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCcccc
Q 024971 32 PFYTFETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRML 91 (260)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 91 (260)
...++++.......+++.. +..+.+++|.|.||..++.+|+.+|+.+.-+|+-+.+....
T Consensus 114 pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsyw 178 (581)
T PF11339_consen 114 PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYW 178 (581)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCcccc
Confidence 4568888888777777665 23478999999999999999999999988888888776554
|
Their function is unknown. |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.3e-09 Score=79.43 Aligned_cols=214 Identities=12% Similarity=0.061 Sum_probs=111.0
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHH-------H---HHHHHHHhhcCCceEEEEeChhhHHHHHHHh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA-------S---QLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 72 (260)
|.+|+..+.+..|-||.-.+...... ...+..|+. . .+...++..|..++.+.|.||||.+|...|.
T Consensus 118 l~~gi~s~~le~Pyyg~RkP~~Q~~s---~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~ 194 (348)
T PF09752_consen 118 LKEGIASLILENPYYGQRKPKDQRRS---SLRNVSDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAALAAS 194 (348)
T ss_pred HHcCcceEEEecccccccChhHhhcc---cccchhHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhh
Confidence 45688999999999987765442111 112222222 1 2233344447789999999999999999999
Q ss_pred hCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHH
Q 024971 73 MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI 152 (260)
Q Consensus 73 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (260)
..|..+..+-.+++..... .+. ... +........+..... ...+.............. .....
T Consensus 195 ~~p~pv~~vp~ls~~sAs~------vFt----~Gv---ls~~i~W~~L~~q~~-~~~~~~~~~~~~~~~~~~---~~~~~ 257 (348)
T PF09752_consen 195 NWPRPVALVPCLSWSSASV------VFT----EGV---LSNSINWDALEKQFE-DTVYEEEISDIPAQNKSL---PLDSM 257 (348)
T ss_pred cCCCceeEEEeecccCCCc------chh----hhh---hhcCCCHHHHHHHhc-ccchhhhhcccccCcccc---cchhh
Confidence 9998766555555542210 000 000 000000000000000 000000000000000000 00000
Q ss_pred hccCCccchHHHHHHHHhhhCCCCCCccCCCC-----CCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCC-c
Q 024971 153 LQPGLETGAADVFLEFICYSGGPLPEELLPQV-----KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC-P 226 (260)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~-~ 226 (260)
................+.. ...+.+. .-.+.++.+++|.++|......+.+..|++++..+++ ||. .
T Consensus 258 ~~~~~~~Ea~~~m~~~md~------~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA 330 (348)
T PF09752_consen 258 EERRRDREALRFMRGVMDS------FTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSA 330 (348)
T ss_pred ccccchHHHHHHHHHHHHh------hccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEE
Confidence 0000001111111111111 1122222 2448889999999999988889999999999999996 995 5
Q ss_pred chhchhHHHHHHHHhhh
Q 024971 227 QVSLYLSLSSACLHTLS 243 (260)
Q Consensus 227 ~~~~p~~~~~~i~~~l~ 243 (260)
++-+.+.+.+.|.+-++
T Consensus 331 ~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 331 YLLHQEAFRQAIYDAFE 347 (348)
T ss_pred eeechHHHHHHHHHHhh
Confidence 56677888888887654
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-10 Score=77.69 Aligned_cols=135 Identities=14% Similarity=0.059 Sum_probs=86.7
Q ss_pred CccEEEEEcCC-CCCCCCCCCCCCCC-CCCCccHHHHHHHHHHHHHhh---c-CCceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLI-GYGYSDKPNPRDFF-DKPFYTFETWASQLNDFCKDV---V-KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~-G~G~S~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.||.|+.+|+- |--.|......... -....+....-.++..+++.+ + .+++-++|.+|||.++..+....| .+
T Consensus 66 ~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f 144 (242)
T KOG3043|consen 66 NGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EF 144 (242)
T ss_pred CCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hh
Confidence 59999999964 41111110000000 001223333334444444444 4 568999999999999999888887 57
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
.+.+..-|....
T Consensus 145 ~a~v~~hps~~d-------------------------------------------------------------------- 156 (242)
T KOG3043|consen 145 DAGVSFHPSFVD-------------------------------------------------------------------- 156 (242)
T ss_pred eeeeEecCCcCC--------------------------------------------------------------------
Confidence 777766653200
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC---CC--ccEEEeCCCCCCcc
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD---SV--EDFIVLPNVGHCPQ 227 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~--~~~~~~~~~gH~~~ 227 (260)
.+....+++|++++.|+.|.++|++....+.+.+ +. .++++++|.+|-.+
T Consensus 157 -------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 157 -------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred -------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 2334567799999999999999998877766553 22 46899999999554
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.9e-09 Score=66.36 Aligned_cols=156 Identities=15% Similarity=0.141 Sum_probs=105.3
Q ss_pred CCccEEEEEcCCCCCCC-----CCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYS-----DKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+|+.|..+++|-.-.. .+++ ....-...+...+.++...+...+.++-|+||||-++...+..-...|
T Consensus 41 ~~G~~vaRfefpYma~Rrtg~rkPp~------~~~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i 114 (213)
T COG3571 41 RRGWLVARFEFPYMAARRTGRRKPPP------GSGTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPI 114 (213)
T ss_pred hCceeEEEeecchhhhccccCCCCcC------ccccCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCc
Confidence 36889999987754322 2222 233344567777778888877779999999999999999987755558
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++++++-+..++.. ++..
T Consensus 115 ~~L~clgYPfhppGK---------------------------------Pe~~---------------------------- 133 (213)
T COG3571 115 DGLVCLGYPFHPPGK---------------------------------PEQL---------------------------- 133 (213)
T ss_pred ceEEEecCccCCCCC---------------------------------cccc----------------------------
Confidence 999988755322100 0000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcc----------h
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ----------V 228 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~----------~ 228 (260)
..+.+..+++|+++.+|+.|.+-..+....+. ..+..++++++++.|.+- .
T Consensus 134 ------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~-ls~~iev~wl~~adHDLkp~k~vsgls~~ 194 (213)
T COG3571 134 ------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA-LSDPIEVVWLEDADHDLKPRKLVSGLSTA 194 (213)
T ss_pred ------------------hhhhccCCCCCeEEeecccccccCHHHHHhhh-cCCceEEEEeccCccccccccccccccHH
Confidence 03467788999999999999988766553322 245578999999999542 2
Q ss_pred hchhHHHHHHHHhhhhc
Q 024971 229 SLYLSLSSACLHTLSYL 245 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~~ 245 (260)
++-...++.|..|.+.+
T Consensus 195 ~hL~~~A~~va~~~~~l 211 (213)
T COG3571 195 DHLKTLAEQVAGWARRL 211 (213)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 23445667777777654
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.8e-09 Score=74.06 Aligned_cols=233 Identities=15% Similarity=0.127 Sum_probs=126.0
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCC--CCCCccHHHHHHHHHHHHHhhc--CCceEEEEeChhhHHHHHHHhhCc--cch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFF--DKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEP--EIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p--~~v 78 (260)
+.+.++.+-..||-.-......+.. ....++++++++.=.++++..- ..+++++|||-|+++.+.+..... -.|
T Consensus 58 ~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~v 137 (301)
T KOG3975|consen 58 DRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSV 137 (301)
T ss_pred cccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccce
Confidence 4466888888888654311110000 1357899999999899998873 458999999999999999886422 247
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhcc---
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP--- 155 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 155 (260)
.+++++-|.......+...+........+.......... -....+...+.++.+..........++.......
T Consensus 138 qKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi----~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~ 213 (301)
T KOG3975|consen 138 QKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYI----YWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHP 213 (301)
T ss_pred EEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeee----eeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcH
Confidence 888888877543332222222222211111111000000 0011223333333333322222233332111100
Q ss_pred CCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEe-CCCCCCcchhchhHH
Q 024971 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVL-PNVGHCPQVSLYLSL 234 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~gH~~~~~~p~~~ 234 (260)
...........+-+..... ...+..++-.+-+.+.+|..|.++|.+....+.+..|..++.+- ++.-|.+...+.+.+
T Consensus 214 ~v~rn~v~la~qEm~eV~~-~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~m 292 (301)
T KOG3975|consen 214 QVVRNSVGLAAQEMEEVTT-RDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYM 292 (301)
T ss_pred HHHHHHhhhchHHHHHHHH-hHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeeccccCCcceeecccHHH
Confidence 0000000000000000000 00223344457789999999999999999999998886554432 678998888888999
Q ss_pred HHHHHHhh
Q 024971 235 SSACLHTL 242 (260)
Q Consensus 235 ~~~i~~~l 242 (260)
++.+.+.+
T Consensus 293 a~~v~d~~ 300 (301)
T KOG3975|consen 293 ANAVFDMI 300 (301)
T ss_pred HHHHHHhh
Confidence 88887765
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-08 Score=71.75 Aligned_cols=78 Identities=15% Similarity=0.153 Sum_probs=58.5
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh-hcCCceEEEEeChhhHHHHHHHhh---Cccc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VVKDQAFFICNSIGGLVGLQAAVM---EPEI 77 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~---~p~~ 77 (260)
.|...+.|+++|.+|+|.+.... .+++.+++.+...+.. ....+++++|||+||.++..++.+ .++.
T Consensus 21 ~l~~~~~v~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~ 91 (212)
T smart00824 21 ALRGRRDVSALPLPGFGPGEPLP---------ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIP 91 (212)
T ss_pred hcCCCccEEEecCCCCCCCCCCC---------CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCC
Confidence 35667899999999998765533 3677777766554443 345689999999999999988876 3456
Q ss_pred hhhceEeccCc
Q 024971 78 CRGMILLNISL 88 (260)
Q Consensus 78 v~~lvl~~~~~ 88 (260)
+.+++++++..
T Consensus 92 ~~~l~~~~~~~ 102 (212)
T smart00824 92 PAAVVLLDTYP 102 (212)
T ss_pred CcEEEEEccCC
Confidence 88898887653
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.9e-09 Score=71.88 Aligned_cols=73 Identities=22% Similarity=0.194 Sum_probs=56.3
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCcc---
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE--- 76 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~--- 76 (260)
++|+.|+.+|-+-+=.+.+ +.++.+.|+..+++++ +.++++|+|+|+|+-+.-....+.|.
T Consensus 27 ~~G~~VvGvdsl~Yfw~~r------------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r 94 (192)
T PF06057_consen 27 KQGVPVVGVDSLRYFWSER------------TPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALR 94 (192)
T ss_pred HCCCeEEEechHHHHhhhC------------CHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHH
Confidence 4689999999776665544 4566777777777665 66799999999999888777776663
Q ss_pred -chhhceEeccCc
Q 024971 77 -ICRGMILLNISL 88 (260)
Q Consensus 77 -~v~~lvl~~~~~ 88 (260)
+|..+++++|..
T Consensus 95 ~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 95 ARVAQVVLLSPST 107 (192)
T ss_pred hheeEEEEeccCC
Confidence 688999999864
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.8e-09 Score=71.91 Aligned_cols=154 Identities=19% Similarity=0.176 Sum_probs=93.4
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHH----HHHHHhhc-CCceEEEEeChhhHHHHHHHhh-Cc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQL----NDFCKDVV-KDQAFFICNSIGGLVGLQAAVM-EP 75 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~-~p 75 (260)
++..||+|.+++ ++.+... .++++...++ .-+++... .+.+.+-|||.|+.+|+.+..+ +.
T Consensus 93 a~~~gY~vasvg---Y~l~~q~----------htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~ 159 (270)
T KOG4627|consen 93 AVRRGYRVASVG---YNLCPQV----------HTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRS 159 (270)
T ss_pred hhhcCeEEEEec---cCcCccc----------ccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcC
Confidence 356789998874 5555432 2444444444 44444443 3456666899999999987765 44
Q ss_pred cchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhcc
Q 024971 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (260)
Q Consensus 76 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
.+|.+++++++..... .+. +.+ +...-....+..+..
T Consensus 160 prI~gl~l~~GvY~l~--------------EL~-----------------~te---------~g~dlgLt~~~ae~~--- 196 (270)
T KOG4627|consen 160 PRIWGLILLCGVYDLR--------------ELS-----------------NTE---------SGNDLGLTERNAESV--- 196 (270)
T ss_pred chHHHHHHHhhHhhHH--------------HHh-----------------CCc---------cccccCcccchhhhc---
Confidence 5799999998864211 000 000 000000111110000
Q ss_pred CCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhc
Q 024971 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSL 230 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 230 (260)
..+ ...+..+++|+|++.|++|.-.-.+..+.+......+++..+++.+|+-..++
T Consensus 197 ------------------Scd-l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 197 ------------------SCD-LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred ------------------Ccc-HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 000 23466788999999999997555566777888777799999999999876654
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.00 E-value=5e-09 Score=73.83 Aligned_cols=74 Identities=20% Similarity=0.179 Sum_probs=49.0
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh-----hcCCceEEEEeChhhHHHHHHHhhCcc---
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-----VVKDQAFFICNSIGGLVGLQAAVMEPE--- 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~--- 76 (260)
.|+.|+.+|+|=..... ....+++..+.+.-++++ .+.++++++|+|.||.+++.++.+..+
T Consensus 28 ~g~~v~~~~Yrl~p~~~----------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~ 97 (211)
T PF07859_consen 28 RGFVVVSIDYRLAPEAP----------FPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGL 97 (211)
T ss_dssp HTSEEEEEE---TTTSS----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTT
T ss_pred ccEEEEEeecccccccc----------ccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcc
Confidence 58999999999432111 122444444444455555 345689999999999999999976443
Q ss_pred -chhhceEeccCc
Q 024971 77 -ICRGMILLNISL 88 (260)
Q Consensus 77 -~v~~lvl~~~~~ 88 (260)
.++++++++|..
T Consensus 98 ~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 98 PKPKGIILISPWT 110 (211)
T ss_dssp CHESEEEEESCHS
T ss_pred cchhhhhcccccc
Confidence 388999999853
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.1e-08 Score=72.08 Aligned_cols=83 Identities=19% Similarity=0.125 Sum_probs=51.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC---CceEEEEeChhhHHHHHHHhhC----
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVME---- 74 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lvGhS~Gg~~a~~~a~~~---- 74 (260)
.|++||.|+++|+.|.|..-.... ...++.-|.++...++....+. .++.++|||-||.-++..+...
T Consensus 22 ~L~~GyaVv~pDY~Glg~~y~~~~-----~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YA 96 (290)
T PF03583_consen 22 WLARGYAVVAPDYEGLGTPYLNGR-----SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYA 96 (290)
T ss_pred HHHCCCEEEecCCCCCCCcccCcH-----hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhC
Confidence 478999999999999998211110 1223333333333333333332 4799999999999887766432
Q ss_pred ccc---hhhceEeccCcc
Q 024971 75 PEI---CRGMILLNISLR 89 (260)
Q Consensus 75 p~~---v~~lvl~~~~~~ 89 (260)
||. +.+.+..+++..
T Consensus 97 peL~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 97 PELNRDLVGAAAGGPPAD 114 (290)
T ss_pred cccccceeEEeccCCccC
Confidence 443 566666666543
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.3e-10 Score=86.23 Aligned_cols=80 Identities=16% Similarity=0.216 Sum_probs=58.2
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccc----hhh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI----CRG 80 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~----v~~ 80 (260)
.|| +...|++|+|.+.+... .....++++.+.+.++.+..+.++++|+||||||.++..++..+|+. |++
T Consensus 120 ~GY-~~~~dL~g~gYDwR~~~-----~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~ 193 (440)
T PLN02733 120 WGY-KEGKTLFGFGYDFRQSN-----RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNS 193 (440)
T ss_pred cCC-ccCCCcccCCCCccccc-----cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhcc
Confidence 355 44889999999876541 01223455555555566666778999999999999999999988864 788
Q ss_pred ceEeccCccc
Q 024971 81 MILLNISLRM 90 (260)
Q Consensus 81 lvl~~~~~~~ 90 (260)
+|.++++...
T Consensus 194 ~I~la~P~~G 203 (440)
T PLN02733 194 WIAIAAPFQG 203 (440)
T ss_pred EEEECCCCCC
Confidence 8899887543
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.3e-09 Score=73.77 Aligned_cols=152 Identities=12% Similarity=0.075 Sum_probs=87.9
Q ss_pred ccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCcc-----chhhceEeccCccccccCCCCCCCcchh
Q 024971 34 YTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE-----ICRGMILLNISLRMLHIKKQPWYGRPLI 104 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 104 (260)
.+....+..+..++..| +++++.+|||||||..++.++..+.. ++.++|.++++...........
T Consensus 80 ~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~------ 153 (255)
T PF06028_consen 80 ANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ------ 153 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T------
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc------
Confidence 46778888888777776 67899999999999999999877532 4899999998764421111000
Q ss_pred HHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCC
Q 024971 105 RSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQV 184 (260)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 184 (260)
....+.. .. .......+..+.... ...++ -
T Consensus 154 -~~~~~~~------------------------------------------~g-p~~~~~~y~~l~~~~-----~~~~p-~ 183 (255)
T PF06028_consen 154 -NQNDLNK------------------------------------------NG-PKSMTPMYQDLLKNR-----RKNFP-K 183 (255)
T ss_dssp -TTT-CST------------------------------------------T--BSS--HHHHHHHHTH-----GGGST-T
T ss_pred -hhhhhcc------------------------------------------cC-CcccCHHHHHHHHHH-----HhhCC-C
Confidence 0000000 00 000011111111110 01122 2
Q ss_pred CCCEEEEecC------CCCCCChHHHHHhhccCCC----ccEEEeC--CCCCCcchhchhHHHHHHHHhh
Q 024971 185 KCPVLIAWGD------KDPWEPIELGRAYGNFDSV----EDFIVLP--NVGHCPQVSLYLSLSSACLHTL 242 (260)
Q Consensus 185 ~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~----~~~~~~~--~~gH~~~~~~p~~~~~~i~~~l 242 (260)
++.+|-|.|. .|..+|...++.+...+.+ -+..++. ++.|.-..|++ +|.+.|.+||
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FL 252 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFL 252 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHH
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHh
Confidence 5789999998 7889998877665544332 3444554 46899888875 6778888887
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.1e-09 Score=72.94 Aligned_cols=178 Identities=12% Similarity=0.058 Sum_probs=80.7
Q ss_pred CCccEEEEEcCCCC-CCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~-G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+.||+|+.+|.-.| |.|++.. ..+++....+++..+++.+ |..++-|+.-|..|-+|+..|.+. .+.
T Consensus 55 ~NGFhViRyDsl~HvGlSsG~I-------~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~ls 125 (294)
T PF02273_consen 55 ANGFHVIRYDSLNHVGLSSGDI-------NEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLS 125 (294)
T ss_dssp TTT--EEEE---B--------------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----S
T ss_pred hCCeEEEeccccccccCCCCCh-------hhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--Ccc
Confidence 57999999999988 9998876 6789999999988877776 667899999999999999999854 255
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCccc-HHHHHHHhccCCc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVT-EELVEKILQPGLE 158 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 158 (260)
-+|..-+.... ..-+...+....+... ...+..- -.+. ..... +.+..........
T Consensus 126 fLitaVGVVnl-------------r~TLe~al~~Dyl~~~-------i~~lp~d--ldfe-Gh~l~~~vFv~dc~e~~w~ 182 (294)
T PF02273_consen 126 FLITAVGVVNL-------------RDTLEKALGYDYLQLP-------IEQLPED--LDFE-GHNLGAEVFVTDCFEHGWD 182 (294)
T ss_dssp EEEEES--S-H-------------HHHHHHHHSS-GGGS--------GGG--SE--EEET-TEEEEHHHHHHHHHHTT-S
T ss_pred eEEEEeeeeeH-------------HHHHHHHhccchhhcc-------hhhCCCc--cccc-ccccchHHHHHHHHHcCCc
Confidence 55555443211 1111111111000000 0000000 0000 00011 1111111111000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc--CCCccEEEeCCCCCCcc
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQ 227 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 227 (260)
.........+.+.+|++.+.+++|.++......++... .+.+++..++|++|-+.
T Consensus 183 --------------~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 183 --------------DLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp --------------SHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred --------------cchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 00001345677899999999999999998888887664 45578889999999865
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.6e-09 Score=84.52 Aligned_cols=69 Identities=14% Similarity=0.050 Sum_probs=52.1
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCC-----CCCC-----------CccHHHHHHHHHHHHHhhc----------------C
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDF-----FDKP-----------FYTFETWASQLNDFCKDVV----------------K 52 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~-----~~~~-----------~~~~~~~~~~~~~~~~~~~----------------~ 52 (260)
+||+|+++|+||||.|........ .... ..++++.+.|+..+...++ .
T Consensus 475 ~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~ 554 (792)
T TIGR03502 475 AGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDG 554 (792)
T ss_pred CCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCC
Confidence 689999999999999955311000 0001 1278999999998888876 2
Q ss_pred CceEEEEeChhhHHHHHHHhh
Q 024971 53 DQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
.+++++||||||.++..++..
T Consensus 555 ~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 555 SKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CcEEEEecCHHHHHHHHHHHh
Confidence 489999999999999999875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.8e-08 Score=79.32 Aligned_cols=181 Identities=13% Similarity=0.023 Sum_probs=110.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCC-CCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccch-h
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEIC-R 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v-~ 79 (260)
..|+.|+.+|.||.|......... ...-+....+|+...+..+++.. +.+++.++|+|.||.+++.++...|+.+ +
T Consensus 556 ~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fk 635 (755)
T KOG2100|consen 556 SRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFK 635 (755)
T ss_pred cCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEE
Confidence 468999999999998765432100 00023456777777777777665 3458999999999999999999998554 5
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
..+.++|......... ...... ++........ +
T Consensus 636 cgvavaPVtd~~~yds------~~tery------------------------------mg~p~~~~~~----y------- 668 (755)
T KOG2100|consen 636 CGVAVAPVTDWLYYDS------TYTERY------------------------------MGLPSENDKG----Y------- 668 (755)
T ss_pred EEEEecceeeeeeecc------cccHhh------------------------------cCCCccccch----h-------
Confidence 5599999754320000 000000 0000000000 0
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCE-EEEecCCCCCCChHHHHHhh----cc-CCCccEEEeCCCCCCcchhc-hh
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPV-LIAWGDKDPWEPIELGRAYG----NF-DSVEDFIVLPNVGHCPQVSL-YL 232 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-l~i~g~~D~~~~~~~~~~~~----~~-~~~~~~~~~~~~gH~~~~~~-p~ 232 (260)
.. ......+..++.|. |++||+.|..++.+....+. .. .+ .++.++|+.+|.+..-. -.
T Consensus 669 ------~e-------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~-~~~~vypde~H~is~~~~~~ 734 (755)
T KOG2100|consen 669 ------EE-------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVP-FRLLVYPDENHGISYVEVIS 734 (755)
T ss_pred ------hh-------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCc-eEEEEeCCCCcccccccchH
Confidence 00 00123344555555 99999999999877655544 33 33 78999999999877543 35
Q ss_pred HHHHHHHHhhhhc
Q 024971 233 SLSSACLHTLSYL 245 (260)
Q Consensus 233 ~~~~~i~~~l~~~ 245 (260)
.+...+..|+..+
T Consensus 735 ~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 735 HLYEKLDRFLRDC 747 (755)
T ss_pred HHHHHHHHHHHHH
Confidence 6677777777643
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.3e-08 Score=67.62 Aligned_cols=78 Identities=18% Similarity=0.094 Sum_probs=52.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh-h------cCCceEEEEeChhhHHHHHHHhhC--
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-V------VKDQAFFICNSIGGLVGLQAAVME-- 74 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~lvGhS~Gg~~a~~~a~~~-- 74 (260)
+.||-|+++|+...+...... +...+.+.++.+.+=++. + +..++.|.|||-||-+|..++..+
T Consensus 42 ShGyIVV~~d~~~~~~~~~~~-------~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~ 114 (259)
T PF12740_consen 42 SHGYIVVAPDLYSIGGPDDTD-------EVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNAS 114 (259)
T ss_pred hCceEEEEecccccCCCCcch-------hHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcc
Confidence 358999999977654422211 222334444433332221 1 345899999999999999999887
Q ss_pred ---ccchhhceEeccCc
Q 024971 75 ---PEICRGMILLNISL 88 (260)
Q Consensus 75 ---p~~v~~lvl~~~~~ 88 (260)
+.+++++++++|.-
T Consensus 115 ~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 115 SSLDLRFSALILLDPVD 131 (259)
T ss_pred cccccceeEEEEecccc
Confidence 55899999999973
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.5e-07 Score=65.17 Aligned_cols=78 Identities=23% Similarity=0.308 Sum_probs=63.2
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhC---ccch
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVME---PEIC 78 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~---p~~v 78 (260)
|.....|+.++.||.|.-.. ...+++++++...+.|.... ..+++|+|||+||.+|+.+|.+- .+.|
T Consensus 23 l~~~~~v~~l~a~g~~~~~~---------~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~V 93 (257)
T COG3319 23 LGPLLPVYGLQAPGYGAGEQ---------PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEV 93 (257)
T ss_pred hccCceeeccccCccccccc---------ccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeE
Confidence 45668899999999986433 34589999998888887774 45999999999999999999763 3468
Q ss_pred hhceEeccCcc
Q 024971 79 RGMILLNISLR 89 (260)
Q Consensus 79 ~~lvl~~~~~~ 89 (260)
..++++++...
T Consensus 94 a~L~llD~~~~ 104 (257)
T COG3319 94 AFLGLLDAVPP 104 (257)
T ss_pred EEEEEeccCCC
Confidence 99999999764
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.2e-08 Score=72.30 Aligned_cols=78 Identities=17% Similarity=0.083 Sum_probs=59.3
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
++.||.|+.+++||++.|.+.+- ...+....-..+.-.++.++. +.+++.|+|.||.-+..+|..||+ |++
T Consensus 265 ~~lgYsvLGwNhPGFagSTG~P~------p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-Vka 337 (517)
T KOG1553|consen 265 AQLGYSVLGWNHPGFAGSTGLPY------PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKA 337 (517)
T ss_pred HHhCceeeccCCCCccccCCCCC------cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceE
Confidence 35689999999999999988662 223333332333345666765 579999999999999999999997 999
Q ss_pred ceEeccC
Q 024971 81 MILLNIS 87 (260)
Q Consensus 81 lvl~~~~ 87 (260)
+|+-++.
T Consensus 338 vvLDAtF 344 (517)
T KOG1553|consen 338 VVLDATF 344 (517)
T ss_pred EEeecch
Confidence 9987765
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.5e-07 Score=63.90 Aligned_cols=64 Identities=14% Similarity=0.136 Sum_probs=51.7
Q ss_pred CCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhhhccc
Q 024971 181 LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 181 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~~~~ 247 (260)
.+.+++|.|.|.|+.|.+++...+..+++..++..+..-+ +||++...+ ...+.|.+|++.+..
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKA--KYKEKIADFIQSFLQ 222 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCch--HHHHHHHHHHHHHHH
Confidence 3568899999999999999999999999999988666667 699988654 666777777765533
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.6e-07 Score=63.20 Aligned_cols=60 Identities=15% Similarity=0.091 Sum_probs=52.3
Q ss_pred EEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCC-cchhchhHHHHHHHHhhhhcccc
Q 024971 188 VLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC-PQVSLYLSLSSACLHTLSYLHTC 248 (260)
Q Consensus 188 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~-~~~~~p~~~~~~i~~~l~~~~~~ 248 (260)
+.++.+++|..+|......+++..|++++..++ +||. .++-+-+.+.+.|.+-|+.++++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ke 369 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLDKE 369 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhhhc
Confidence 677789999999998889999999999999999 6994 56677899999999999988754
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=9.1e-07 Score=66.27 Aligned_cols=77 Identities=16% Similarity=0.075 Sum_probs=52.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh---hc--CCceEEEEeChhhHHHHHHHhhCcc--
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VV--KDQAFFICNSIGGLVGLQAAVMEPE-- 76 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~lvGhS~Gg~~a~~~a~~~p~-- 76 (260)
..|+.|+++|+|=--+-.. ...+++..+.+..+.++ ++ .+++.++|+|.||.+++.++..-.+
T Consensus 108 ~~g~~vv~vdYrlaPe~~~----------p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~ 177 (312)
T COG0657 108 AAGAVVVSVDYRLAPEHPF----------PAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRG 177 (312)
T ss_pred HcCCEEEecCCCCCCCCCC----------CchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcC
Confidence 4689999999995544322 23455544444444433 33 4679999999999999999876443
Q ss_pred --chhhceEeccCccc
Q 024971 77 --ICRGMILLNISLRM 90 (260)
Q Consensus 77 --~v~~lvl~~~~~~~ 90 (260)
...+.+++.|....
T Consensus 178 ~~~p~~~~li~P~~d~ 193 (312)
T COG0657 178 LPLPAAQVLISPLLDL 193 (312)
T ss_pred CCCceEEEEEecccCC
Confidence 36788888887544
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.6e-06 Score=66.54 Aligned_cols=83 Identities=19% Similarity=0.194 Sum_probs=57.3
Q ss_pred CCccEEEEEcCC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHhh--
Q 024971 4 AKSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM-- 73 (260)
Q Consensus 4 ~~~~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~~-- 73 (260)
.+..+++-+|.| |.|.|...... ....+.++.++++..+|+.+ ...+++|.|.|+||..+-.+|..
T Consensus 83 ~~~an~l~iD~PvGtGfS~~~~~~----~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 83 NKFANLLFIDQPVGTGFSYGNDPS----DYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp GGTSEEEEE--STTSTT-EESSGG----GGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred ccccceEEEeecCceEEeeccccc----cccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 345789999976 99999776531 12347788888888888765 33589999999999987766643
Q ss_pred --C------ccchhhceEeccCccc
Q 024971 74 --E------PEICRGMILLNISLRM 90 (260)
Q Consensus 74 --~------p~~v~~lvl~~~~~~~ 90 (260)
. +-.++|+++.++...+
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBH
T ss_pred hccccccccccccccceecCccccc
Confidence 2 2347899999987654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.4e-07 Score=66.27 Aligned_cols=49 Identities=24% Similarity=0.288 Sum_probs=32.4
Q ss_pred CCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCCCCCcchhc
Q 024971 181 LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQVSL 230 (260)
Q Consensus 181 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~ 230 (260)
-.+|++|+|.++|++|.+++++..+.+.+...+ .+++..+ +||.+....
T Consensus 157 ~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~ 206 (212)
T PF03959_consen 157 EPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKK 206 (212)
T ss_dssp -TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----H
T ss_pred cccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCCh
Confidence 346789999999999999999888888887666 6777777 589877653
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=98.62 E-value=8.5e-08 Score=55.41 Aligned_cols=39 Identities=21% Similarity=0.406 Sum_probs=33.3
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK 48 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (260)
++||.|+++|+||||.|+... ....+++++++|+..+++
T Consensus 41 ~~G~~V~~~D~rGhG~S~g~r------g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 41 EQGYAVFAYDHRGHGRSEGKR------GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred hCCCEEEEECCCcCCCCCCcc------cccCCHHHHHHHHHHHhC
Confidence 469999999999999999755 356789999999998864
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.4e-07 Score=65.36 Aligned_cols=75 Identities=16% Similarity=0.163 Sum_probs=49.4
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHH----HHHHHHhh-----cCCceEEEEeChhhHHHHHHHhhCc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQ----LNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
..++++++|+......-. ...+.+.++. +..+++.+ +.+++++|||||||.+|..++...+
T Consensus 38 ~~~d~ft~df~~~~s~~~----------g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~ 107 (225)
T PF07819_consen 38 SHFDFFTVDFNEELSAFH----------GRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPN 107 (225)
T ss_pred cceeEEEeccCccccccc----------cccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccc
Confidence 357888888776532211 1233333333 33344444 4568999999999999998876543
Q ss_pred ---cchhhceEeccCcc
Q 024971 76 ---EICRGMILLNISLR 89 (260)
Q Consensus 76 ---~~v~~lvl~~~~~~ 89 (260)
+.|+.+|.++++..
T Consensus 108 ~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 108 YDPDSVKTIITLGTPHR 124 (225)
T ss_pred cccccEEEEEEEcCCCC
Confidence 46999999998753
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.2e-06 Score=68.60 Aligned_cols=184 Identities=16% Similarity=0.059 Sum_probs=109.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCC-CCCCccHHHHHHHHHHHHHhhc---CCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFF-DKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+.||.|+.+|-||............. ......++|.++-+.-+.++.| .+++.+-|+|+||.+++....++|+-++
T Consensus 674 slGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~Ifr 753 (867)
T KOG2281|consen 674 SLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFR 753 (867)
T ss_pred hcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceee
Confidence 46999999999997554332111000 0245678999999998888885 4689999999999999999999999777
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
..|.=+|..... .........+ ++ .++.....|. .
T Consensus 754 vAIAGapVT~W~------~YDTgYTERY------------------------------Mg----~P~~nE~gY~-----a 788 (867)
T KOG2281|consen 754 VAIAGAPVTDWR------LYDTGYTERY------------------------------MG----YPDNNEHGYG-----A 788 (867)
T ss_pred EEeccCcceeee------eecccchhhh------------------------------cC----CCccchhccc-----c
Confidence 666555543210 0000000000 00 0000000000 0
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHH----hhccCCCccEEEeCCCCCCcch-hchhHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQV-SLYLSL 234 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~----~~~~~~~~~~~~~~~~gH~~~~-~~p~~~ 234 (260)
+.. ... .+.+..=....|++||--|..+....... +.+..+.-++.++|+-.|.+-. |..+-.
T Consensus 789 gSV---~~~---------VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~y 856 (867)
T KOG2281|consen 789 GSV---AGH---------VEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYY 856 (867)
T ss_pred hhH---HHH---------HhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhH
Confidence 000 000 23344334568999999998776554433 4444555789999999997654 344455
Q ss_pred HHHHHHhhhh
Q 024971 235 SSACLHTLSY 244 (260)
Q Consensus 235 ~~~i~~~l~~ 244 (260)
...+..|++.
T Consensus 857 E~rll~FlQ~ 866 (867)
T KOG2281|consen 857 EARLLHFLQE 866 (867)
T ss_pred HHHHHHHHhh
Confidence 6667777754
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.3e-06 Score=68.50 Aligned_cols=82 Identities=16% Similarity=0.069 Sum_probs=59.9
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcc-HHHHHHHHHHHHHhhc--CCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYT-FETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
.++||.|+..|.||.|.|++... ...+ -.+-.-|+.+.+.+.. ..++..+|.|++|...+.+|+..|..++
T Consensus 77 aa~GYavV~qDvRG~~~SeG~~~------~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLk 150 (563)
T COG2936 77 AAQGYAVVNQDVRGRGGSEGVFD------PESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALK 150 (563)
T ss_pred ecCceEEEEecccccccCCcccc------eeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchhe
Confidence 36899999999999999998763 2223 1112224444444442 3589999999999999999999888888
Q ss_pred hceEeccCccc
Q 024971 80 GMILLNISLRM 90 (260)
Q Consensus 80 ~lvl~~~~~~~ 90 (260)
+++...+....
T Consensus 151 ai~p~~~~~D~ 161 (563)
T COG2936 151 AIAPTEGLVDR 161 (563)
T ss_pred eeccccccccc
Confidence 88877776543
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.7e-06 Score=58.26 Aligned_cols=48 Identities=10% Similarity=0.123 Sum_probs=38.6
Q ss_pred HHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 41 SQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 41 ~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
..+..+.++.++ +++++.|+|.||..+..++..+|+.+.++..+++.+
T Consensus 83 ~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 83 ALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 334444455544 489999999999999999999999999988888764
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.6e-05 Score=52.28 Aligned_cols=35 Identities=11% Similarity=0.178 Sum_probs=29.9
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchhhceEeccCccc
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRM 90 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 90 (260)
+++.|||+|+||..|..+|.++. + ..|+++|...+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 57999999999999999999985 3 77889998643
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.3e-07 Score=55.22 Aligned_cols=60 Identities=22% Similarity=0.189 Sum_probs=53.7
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhhh
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
+.|+|++.++.|+.+|.+.++.+++.+++++++.+++.||..+...-.-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 599999999999999999999999999999999999999988765556778888888864
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.7e-07 Score=65.09 Aligned_cols=61 Identities=18% Similarity=0.199 Sum_probs=49.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-------CCceEEEEeChhhHHHHHHHhhCc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-------KDQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
.+-+|+.+++||.|.|.+.. +.++++.|-.+.++.+. .+++++.|||+||.++..++.++.
T Consensus 170 ~~aNvl~fNYpGVg~S~G~~----------s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 170 LGANVLVFNYPGVGSSTGPP----------SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred cCCcEEEECCCccccCCCCC----------CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 46789999999999998765 56888888877777762 257999999999999988666543
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.5e-07 Score=68.16 Aligned_cols=57 Identities=21% Similarity=0.162 Sum_probs=42.8
Q ss_pred CccCCCCCCCEEEEecCCCCCCChHHH-HHhhccCCCc--cEEEeCCCCCCcchhchhHH
Q 024971 178 EELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVE--DFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 178 ~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~--~~~~~~~~gH~~~~~~p~~~ 234 (260)
...+.+++.|++++.|..|.+.|.... ......+++. .+..++++.|+-+.+-.++.
T Consensus 244 ~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 244 TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred cccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 456788999999999999997765532 3344445555 57888999999988876664
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.43 E-value=6e-06 Score=61.41 Aligned_cols=75 Identities=17% Similarity=0.080 Sum_probs=53.1
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh------hcCCceEEEEeChhhHHHHHHHhhC-----
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD------VVKDQAFFICNSIGGLVGLQAAVME----- 74 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~----- 74 (260)
+.-|+++|+|=--+.. .+..++|-.+.+.-+.++ .+.++++|+|-|.||.+|..+|.+.
T Consensus 123 ~~vvvSVdYRLAPEh~----------~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~ 192 (336)
T KOG1515|consen 123 NCVVVSVDYRLAPEHP----------FPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKL 192 (336)
T ss_pred CeEEEecCcccCCCCC----------CCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccC
Confidence 5678888888332222 234566666666666554 2456899999999999999888652
Q ss_pred -ccchhhceEeccCccc
Q 024971 75 -PEICRGMILLNISLRM 90 (260)
Q Consensus 75 -p~~v~~lvl~~~~~~~ 90 (260)
+-++++.|++-|....
T Consensus 193 ~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 193 SKPKIKGQILIYPFFQG 209 (336)
T ss_pred CCcceEEEEEEecccCC
Confidence 3569999999997644
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.5e-06 Score=58.06 Aligned_cols=78 Identities=13% Similarity=-0.002 Sum_probs=51.3
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHhhCc-
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVMEP- 75 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~p- 75 (260)
+.||-|+++++-..-.-+.. .+..+....++.+.+-++++ +..++.++|||.||-.|..+|..+.
T Consensus 71 SHGfIVVAPQl~~~~~p~~~-------~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~ 143 (307)
T PF07224_consen 71 SHGFIVVAPQLYTLFPPDGQ-------DEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYAT 143 (307)
T ss_pred hcCeEEEechhhcccCCCch-------HHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccc
Confidence 46899999998753221111 12223344444444444443 2458999999999999999998773
Q ss_pred -cchhhceEeccCc
Q 024971 76 -EICRGMILLNISL 88 (260)
Q Consensus 76 -~~v~~lvl~~~~~ 88 (260)
-.+.++|.++|..
T Consensus 144 ~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 144 SLKFSALIGIDPVA 157 (307)
T ss_pred cCchhheecccccC
Confidence 2488999999874
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.37 E-value=4e-06 Score=62.93 Aligned_cols=63 Identities=13% Similarity=0.075 Sum_probs=50.7
Q ss_pred CCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCCCCCcchhchhHHHHHHHHhhhhccc
Q 024971 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQVSLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 182 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~~~~ 247 (260)
.++++|.++|.|..|.+..+.....+...+|+ ..+..+|+++|.... ..+.+.+..|+..+..
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQN 322 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHHc
Confidence 56689999999999999988888887777665 567788999998776 6677778888876543
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-06 Score=66.97 Aligned_cols=34 Identities=26% Similarity=0.241 Sum_probs=25.9
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchhhceEeccC
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
+++.++|||+||..++..+.+. .++++.|++++.
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH--TT--EEEEES--
T ss_pred hheeeeecCchHHHHHHHHhhc-cCcceEEEeCCc
Confidence 4689999999999999888776 579999999986
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.4e-06 Score=65.77 Aligned_cols=50 Identities=20% Similarity=0.207 Sum_probs=41.4
Q ss_pred ccCCCCCCCEEEEecCCCCCCChHHHHHhhcc-CCCccEEEeCCCCCCcch
Q 024971 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 179 ~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~ 228 (260)
+.+-.++.|+|++.|.+|..+++...+.++++ -...+++++.+++|.+-.
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 44556789999999999999999999988877 345789999999997553
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.32 E-value=8.4e-06 Score=58.64 Aligned_cols=60 Identities=13% Similarity=0.044 Sum_probs=47.5
Q ss_pred CCCCCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCcch-hchhHHHHHHHHhh
Q 024971 183 QVKCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQV-SLYLSLSSACLHTL 242 (260)
Q Consensus 183 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~~l 242 (260)
...+|-++++++.|.+++.+..++..+. .-+++.+.++++.|..+. ++|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4459999999999999999877665433 223677788999998765 57999999998874
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.6e-06 Score=66.07 Aligned_cols=84 Identities=17% Similarity=0.133 Sum_probs=60.6
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-------CCceEEEEeChhhHHHHHHHhhCccch
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-------KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
|--|+++++|-+|.|.+............+.++..+|+..+++++. ..|++++|-|+||.+|..+-.+||+.|
T Consensus 59 ~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~ 138 (434)
T PF05577_consen 59 GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLF 138 (434)
T ss_dssp TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-
T ss_pred CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCee
Confidence 4578999999999998754333223456789999999999888774 137999999999999999999999999
Q ss_pred hhceEeccCcc
Q 024971 79 RGMILLNISLR 89 (260)
Q Consensus 79 ~~lvl~~~~~~ 89 (260)
.+.+..+++..
T Consensus 139 ~ga~ASSapv~ 149 (434)
T PF05577_consen 139 DGAWASSAPVQ 149 (434)
T ss_dssp SEEEEET--CC
T ss_pred EEEEeccceee
Confidence 99998888763
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.7e-05 Score=54.75 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=29.8
Q ss_pred cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccc
Q 024971 51 VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRM 90 (260)
Q Consensus 51 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 90 (260)
+.+.++|||+|||-.+|..+....| ++..|.+++.+.+
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCC
Confidence 4678999999999999988876554 6777777776544
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.5e-05 Score=52.94 Aligned_cols=121 Identities=20% Similarity=0.233 Sum_probs=78.3
Q ss_pred cHHHHHHHHHHHHHhh---c--CCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhh
Q 024971 35 TFETWASQLNDFCKDV---V--KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN 109 (260)
Q Consensus 35 ~~~~~~~~~~~~~~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (260)
++...++.+..++++. + ..++.+-|.|+||.+++..+..+|..+.+++...+......
T Consensus 70 ~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~----------------- 132 (206)
T KOG2112|consen 70 GLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRAS----------------- 132 (206)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccch-----------------
Confidence 4455555566666554 3 24688889999999999999999877777776665421100
Q ss_pred hhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEE
Q 024971 110 LLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVL 189 (260)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 189 (260)
. .+ + ......+ ..|++
T Consensus 133 -------------------------------------~---~~--~--------------------~~~~~~~--~~~i~ 148 (206)
T KOG2112|consen 133 -------------------------------------I---GL--P--------------------GWLPGVN--YTPIL 148 (206)
T ss_pred -------------------------------------h---hc--c--------------------CCccccC--cchhh
Confidence 0 00 0 0000011 68999
Q ss_pred EEecCCCCCCChHHHHH----hhccCCCccEEEeCCCCCCcchhchhHHHH
Q 024971 190 IAWGDKDPWEPIELGRA----YGNFDSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 190 ~i~g~~D~~~~~~~~~~----~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
..||+.|+++|....+. +......++++.++|.+|...-+.-+++..
T Consensus 149 ~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~ 199 (206)
T KOG2112|consen 149 LCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKS 199 (206)
T ss_pred eecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHH
Confidence 99999999999875544 333334488999999999877544444433
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.1e-05 Score=60.20 Aligned_cols=81 Identities=14% Similarity=0.096 Sum_probs=47.5
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHH---------------HHHHHHHhh------cCCceEEEEeCh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWAS---------------QLNDFCKDV------VKDQAFFICNSI 62 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~------~~~~~~lvGhS~ 62 (260)
.+||-|+++|.+|+|+......... ...++...++. |....++.+ +.++|.++|+||
T Consensus 158 k~GYVvla~D~~g~GER~~~e~~~~--~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSm 235 (390)
T PF12715_consen 158 KRGYVVLAPDALGFGERGDMEGAAQ--GSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSM 235 (390)
T ss_dssp TTTSEEEEE--TTSGGG-SSCCCTT--TTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGG
T ss_pred hCCCEEEEEcccccccccccccccc--ccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecc
Confidence 5799999999999998765442211 11222223322 122233333 235899999999
Q ss_pred hhHHHHHHHhhCccchhhceEeccC
Q 024971 63 GGLVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 63 Gg~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
||..++.+|+.. ++|++.|..+-.
T Consensus 236 Gg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 236 GGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp GHHHHHHHHHH--TT--EEEEES-B
T ss_pred cHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 999999999987 578887776654
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.7e-06 Score=64.62 Aligned_cols=79 Identities=15% Similarity=0.062 Sum_probs=48.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCcc--
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPE-- 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~-- 76 (260)
.++.||++||...-...-.. .........+.+..++..| ..++++|||||+||.+|-.++.....
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~-------a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ 175 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ-------AVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGG 175 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH-------HHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT--
T ss_pred CCceEEEEcchhhccccccc-------hhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcc
Confidence 47999999996432211100 1112333444444444443 34689999999999999999988776
Q ss_pred chhhceEeccCccc
Q 024971 77 ICRGMILLNISLRM 90 (260)
Q Consensus 77 ~v~~lvl~~~~~~~ 90 (260)
+|..++.++|+.+.
T Consensus 176 ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 176 KIGRITGLDPAGPL 189 (331)
T ss_dssp -SSEEEEES-B-TT
T ss_pred eeeEEEecCccccc
Confidence 89999999998654
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.09 E-value=8.5e-06 Score=58.16 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=35.7
Q ss_pred HHhhcC--CceEEEEeChhhHHHHHHHhhCccchhhceEeccC
Q 024971 47 CKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 47 ~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
.++.++ .+++++|.|+||.-++.++.++|+.+.+.+++++.
T Consensus 261 as~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 261 ASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred hhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 344444 47999999999999999999999999999999985
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00082 Score=50.51 Aligned_cols=59 Identities=20% Similarity=0.025 Sum_probs=44.7
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhccC------------------------CC-ccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNFD------------------------SV-EDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
.++||+..|..|.+++.-..+.+.+.+ .+ .+++.+.++||+.. .+|++..+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 489999999999998865544432221 12 45677789999996 59999999999
Q ss_pred Hhhhh
Q 024971 240 HTLSY 244 (260)
Q Consensus 240 ~~l~~ 244 (260)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99954
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.7e-05 Score=55.47 Aligned_cols=75 Identities=16% Similarity=0.033 Sum_probs=49.6
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhh----Cc----
Q 024971 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM----EP---- 75 (260)
Q Consensus 8 ~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~----~p---- 75 (260)
.++.+.||+.|.-..-.. ...+...-...+..+++.+ +.+++++++||||+.+.+.+... .+
T Consensus 50 ~~i~FsWPS~g~~~~Y~~------d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~ 123 (233)
T PF05990_consen 50 VVILFSWPSDGSLLGYFY------DRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDV 123 (233)
T ss_pred eEEEEEcCCCCChhhhhh------hhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhh
Confidence 799999999886322110 1123333344455555544 56799999999999999987643 11
Q ss_pred -cchhhceEeccCc
Q 024971 76 -EICRGMILLNISL 88 (260)
Q Consensus 76 -~~v~~lvl~~~~~ 88 (260)
.++..+++.+|-.
T Consensus 124 ~~~~~~viL~ApDi 137 (233)
T PF05990_consen 124 KARFDNVILAAPDI 137 (233)
T ss_pred HhhhheEEEECCCC
Confidence 3578889998864
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00066 Score=53.02 Aligned_cols=59 Identities=20% Similarity=0.025 Sum_probs=45.3
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhccC------------------------CC-ccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNFD------------------------SV-EDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
..+||+..|..|.+++.-..+.+.+.+ .+ .+++.+.+|||+.. .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 489999999999999876555433221 11 45677889999996 58999999999
Q ss_pred Hhhhh
Q 024971 240 HTLSY 244 (260)
Q Consensus 240 ~~l~~ 244 (260)
+|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99954
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00023 Score=48.84 Aligned_cols=58 Identities=10% Similarity=0.043 Sum_probs=46.6
Q ss_pred CccHHHHHHHHHHHHHhhcC----CceEEEEeChhhHHHHHHHh--hCccchhhceEeccCccc
Q 024971 33 FYTFETWASQLNDFCKDVVK----DQAFFICNSIGGLVGLQAAV--MEPEICRGMILLNISLRM 90 (260)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~----~~~~lvGhS~Gg~~a~~~a~--~~p~~v~~lvl~~~~~~~ 90 (260)
..++.+-++|+..++++++. +.++|+|||.|+.=.+.|.. ..|..+.+.|+.+|....
T Consensus 83 t~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 83 TFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred cccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 45777889999999998853 37999999999998888873 356678999999987543
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.4e-05 Score=51.34 Aligned_cols=53 Identities=11% Similarity=-0.001 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCcc----chhhceEeccCc
Q 024971 36 FETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE----ICRGMILLNISL 88 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~ 88 (260)
...+.+.+...++.. ...+++++|||+||.+|..++..... .+..++.++++.
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 344455555555444 45689999999999999999887654 456677777653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=8e-05 Score=57.68 Aligned_cols=52 Identities=21% Similarity=0.197 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhh-----cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 37 ETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 37 ~~~~~~~~~~~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
+.+++++.-.+++. +.++.+|+|+||||..|+.++.++|+++.+++.+++..
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 34456666666654 23468899999999999999999999999999999863
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.84 E-value=4.3e-05 Score=58.88 Aligned_cols=52 Identities=17% Similarity=0.338 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCcc------chhhceEeccCcc
Q 024971 38 TWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPE------ICRGMILLNISLR 89 (260)
Q Consensus 38 ~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~------~v~~lvl~~~~~~ 89 (260)
++...+.+.++.. ..++++||||||||.++..+....+. .|+++|.++++..
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 4455555555444 35799999999999999999887642 4999999998754
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.7e-05 Score=55.80 Aligned_cols=51 Identities=20% Similarity=0.279 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhh-cCC--ceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 38 TWASQLNDFCKDV-VKD--QAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 38 ~~~~~~~~~~~~~-~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
-+.++|...+++- ... +..++|+||||..|+.++.++|+.+.+++.++|..
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 3445666666554 222 27899999999999999999999999999999864
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.78 E-value=7.9e-06 Score=60.72 Aligned_cols=64 Identities=16% Similarity=0.186 Sum_probs=46.2
Q ss_pred cCCCCC-CCEEEEecCCCCCCChHHHHHhhccCC--CccEEEeCCCCCCcchhchh---HHHHHHHHhhh
Q 024971 180 LLPQVK-CPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQVSLYL---SLSSACLHTLS 243 (260)
Q Consensus 180 ~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~---~~~~~i~~~l~ 243 (260)
.+.++. +|+++++|.+|..+|......+.+... ..+...+++++|......+. +..+.+.+|+.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~ 295 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLE 295 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHH
Confidence 344454 899999999999999888887665533 35777888899987754434 55566666664
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.78 E-value=7.1e-05 Score=54.02 Aligned_cols=33 Identities=27% Similarity=0.273 Sum_probs=27.5
Q ss_pred ceEEEEeChhhHHHHHHHhhCccchhhceEeccC
Q 024971 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 54 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
++.++|||+||+.+....+.+. .++..|+++..
T Consensus 242 ~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~W 274 (399)
T KOG3847|consen 242 QAAVIGHSFGGATSIASSSSHT-DFRCAIALDAW 274 (399)
T ss_pred hhhheeccccchhhhhhhcccc-ceeeeeeeeee
Confidence 5789999999999988877664 58888888875
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=97.77 E-value=4.6e-05 Score=53.31 Aligned_cols=78 Identities=10% Similarity=-0.018 Sum_probs=40.2
Q ss_pred CCccE---EEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHR---VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~---v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
++||. |+++++-....+....... ....+..++.+.|.++++..+. ++.||||||||.++..+.... ..+++
T Consensus 27 ~~GY~~~~vya~tyg~~~~~~~~~~~~---~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~-~~~d~ 101 (219)
T PF01674_consen 27 AAGYCDSEVYALTYGSGNGSPSVQNAH---MSCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG-GGADK 101 (219)
T ss_dssp HTT--CCCEEEE--S-CCHHTHHHHHH---B-HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC-TGGGT
T ss_pred HcCCCcceeEeccCCCCCCCCcccccc---cchhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc-CCCCc
Confidence 46888 7999885444322211000 0111234556666667777788 999999999999998887544 33344
Q ss_pred ceEecc
Q 024971 81 MILLNI 86 (260)
Q Consensus 81 lvl~~~ 86 (260)
.+-+.+
T Consensus 102 ~~~lg~ 107 (219)
T PF01674_consen 102 VVNLGP 107 (219)
T ss_dssp EEE---
T ss_pred ccCccc
Confidence 444433
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0017 Score=52.01 Aligned_cols=59 Identities=22% Similarity=0.279 Sum_probs=48.5
Q ss_pred CCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccc
Q 024971 32 PFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRM 90 (260)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 90 (260)
...++.|+++....+++.- ..+.++++|-|.||+++-..+...|+.++++|+-.|....
T Consensus 504 K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 504 KKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred ccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 4568888888777776653 2347999999999999999999999999999999887654
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.72 E-value=9.9e-05 Score=48.28 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC
Q 024971 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
...+.+.++++.....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 4445555655555556899999999999999988753
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0001 Score=55.59 Aligned_cols=56 Identities=13% Similarity=0.062 Sum_probs=47.4
Q ss_pred ccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc--cchhhceEeccCcc
Q 024971 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP--EICRGMILLNISLR 89 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~ 89 (260)
..-+.+..-+.+++...+.+++.++||||||..+..++...+ .+|+.++.++++-.
T Consensus 108 ~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 108 VRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred ccHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 455666677777788888899999999999999999998887 78999999998743
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00056 Score=50.73 Aligned_cols=71 Identities=13% Similarity=0.042 Sum_probs=55.4
Q ss_pred CCCCCCEEEEecCCCCCCChHHHHHhhccCCCcc-EEEeCCCCCCcchhchhHHHHHHHHhhhhcccccccccee
Q 024971 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED-FIVLPNVGHCPQVSLYLSLSSACLHTLSYLHTCRCYDQVA 255 (260)
Q Consensus 182 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~~~p~~~~~~i~~~l~~~~~~~~~~~~~ 255 (260)
.++..|..++.|+.|.+.+++.+..+...+|+.+ +..+|+..|... +..+.+.+..|+.+++..+.-.++.
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~flnrfq~~~~LP~l~ 397 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLNRFQMYPKLPKLE 397 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHHHHhcCCCCchHH
Confidence 4678999999999999998898888888888754 677899988765 4567777888888887766544443
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00015 Score=51.49 Aligned_cols=48 Identities=29% Similarity=0.351 Sum_probs=38.9
Q ss_pred HHHHHHHHh-h--cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 41 SQLNDFCKD-V--VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 41 ~~~~~~~~~-~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
+.+.-+++. + +.++..++|||+||.+++.....+|+.+...++++|..
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 344445554 2 33568999999999999999999999999999999974
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00031 Score=52.84 Aligned_cols=83 Identities=13% Similarity=0.130 Sum_probs=60.4
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCC---CCCCccHHHHHHHHHHHHHhhcC------CceEEEEeChhhHHHHHHHhhCcc
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFF---DKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEPE 76 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~ 76 (260)
+--++-+++|-+|+|.+-...... .....+.++-..|...++..+.- .+++.+|.|+||++|..+=.+||.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 446788999999999765432111 12344566666677777776632 489999999999999999999999
Q ss_pred chhhceEeccCc
Q 024971 77 ICRGMILLNISL 88 (260)
Q Consensus 77 ~v~~lvl~~~~~ 88 (260)
.|.|...-+.+.
T Consensus 191 iv~GAlAaSAPv 202 (492)
T KOG2183|consen 191 IVLGALAASAPV 202 (492)
T ss_pred hhhhhhhccCce
Confidence 888877666554
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0066 Score=46.06 Aligned_cols=80 Identities=10% Similarity=0.100 Sum_probs=55.1
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc-----cchhh
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP-----EICRG 80 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~ 80 (260)
...++++|+.-...-.... .-+..+.+.++-...+++..|.++++|+|-|.||.+++.+..... ..-++
T Consensus 154 ~~SILvLDYsLt~~~~~~~------~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~ 227 (374)
T PF10340_consen 154 EVSILVLDYSLTSSDEHGH------KYPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKS 227 (374)
T ss_pred CCeEEEEeccccccccCCC------cCchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCce
Confidence 3467777766443001111 134567777777778887778899999999999999998875321 12579
Q ss_pred ceEeccCcccc
Q 024971 81 MILLNISLRML 91 (260)
Q Consensus 81 lvl~~~~~~~~ 91 (260)
+|+++|.....
T Consensus 228 ~iLISPWv~l~ 238 (374)
T PF10340_consen 228 AILISPWVNLV 238 (374)
T ss_pred eEEECCCcCCc
Confidence 99999987664
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00043 Score=53.41 Aligned_cols=83 Identities=14% Similarity=0.132 Sum_probs=67.4
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-------CceEEEEeChhhHHHHHHHhhCccch
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
|-.|+.+++|-+|.|.+......+.....+.++...|+.++|++++. .+.+.+|-|+-|.++..+=.++|+.+
T Consensus 118 gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~ 197 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELT 197 (514)
T ss_pred CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhh
Confidence 56899999999999976554333333456788888999999988743 27999999999999999999999999
Q ss_pred hhceEeccCc
Q 024971 79 RGMILLNISL 88 (260)
Q Consensus 79 ~~lvl~~~~~ 88 (260)
.|.|..+++.
T Consensus 198 ~GsvASSapv 207 (514)
T KOG2182|consen 198 VGSVASSAPV 207 (514)
T ss_pred eeecccccce
Confidence 9988887765
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0035 Score=46.83 Aligned_cols=41 Identities=12% Similarity=0.163 Sum_probs=33.6
Q ss_pred HHhhcCCceEEEEeChhhHHHHHHHhhCcc-chhhceEeccC
Q 024971 47 CKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNIS 87 (260)
Q Consensus 47 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~ 87 (260)
.+..+..+++||||+.|+..++.+....+. .++++|++++.
T Consensus 187 ~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 187 AQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred HHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 333455669999999999999999988764 48999999985
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0005 Score=48.29 Aligned_cols=56 Identities=11% Similarity=-0.075 Sum_probs=42.7
Q ss_pred ccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCcc-----chhhceEeccCcc
Q 024971 34 YTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE-----ICRGMILLNISLR 89 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 89 (260)
.+..++...+..++..| +++++.+|||||||.-...|+..+.. .++++|.++.+..
T Consensus 113 ~s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 113 ASGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred CchhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 35556666666666555 67899999999999999999876532 3899999998754
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00059 Score=46.55 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=32.9
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchhhceEeccCccc
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRM 90 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 90 (260)
.++.+.||||||.=|+..+.+.|.+.+++-..+|..++
T Consensus 141 ~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 141 LKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred hhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 47899999999999999999999999988888876543
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0005 Score=48.55 Aligned_cols=36 Identities=14% Similarity=0.051 Sum_probs=29.6
Q ss_pred CceEEEEeChhhHHHHHHHhhCc----cchhhceEeccCc
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEP----EICRGMILLNISL 88 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~~ 88 (260)
+++++.|||.||.+|..++...+ ++|.+++..+++.
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 36999999999999999988743 4688888888764
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00043 Score=48.92 Aligned_cols=34 Identities=29% Similarity=0.369 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHh
Q 024971 39 WASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 39 ~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~ 72 (260)
+++.+.+.++.... .++.+|||||||.++-.+..
T Consensus 62 L~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 62 LAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 34444444444443 48999999999999876554
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00045 Score=49.36 Aligned_cols=23 Identities=17% Similarity=0.160 Sum_probs=19.6
Q ss_pred CCceEEEEeChhhHHHHHHHhhC
Q 024971 52 KDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 52 ~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
..++++.|||+||.+|..++...
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHH
Confidence 45799999999999999888753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.028 Score=40.81 Aligned_cols=78 Identities=13% Similarity=0.186 Sum_probs=53.9
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhH-----HHHHHHhhCccchh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGL-----VGLQAAVMEPEICR 79 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~-----~a~~~a~~~p~~v~ 79 (260)
....|+..||-.--.-... .+.++++++++.+.+.++.+|.+ +++++.+.-+. +++..+...|..-.
T Consensus 129 p~~~vyitDW~dAr~Vp~~-------~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~Ps 200 (415)
T COG4553 129 PYHDVYITDWVDARMVPLE-------AGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPS 200 (415)
T ss_pred cccceeEeeccccceeecc-------cCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCc
Confidence 3455666666543222222 25789999999999999999965 78888887654 34444445676778
Q ss_pred hceEeccCccc
Q 024971 80 GMILLNISLRM 90 (260)
Q Consensus 80 ~lvl~~~~~~~ 90 (260)
.++++++++..
T Consensus 201 sMtlmGgPIDa 211 (415)
T COG4553 201 SMTLMGGPIDA 211 (415)
T ss_pred eeeeecCcccc
Confidence 89999887643
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0017 Score=48.34 Aligned_cols=81 Identities=14% Similarity=0.115 Sum_probs=50.7
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhh--------Cccc
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM--------EPEI 77 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~--------~p~~ 77 (260)
....+.+.||..|.--.-.-.. ....++-..+..-+..+.+....++++|++||||..+++....+ -+.+
T Consensus 146 ~~~pVvFSWPS~g~l~~Yn~Dr--eS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~k 223 (377)
T COG4782 146 DGVPVVFSWPSRGSLLGYNYDR--ESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAK 223 (377)
T ss_pred CcceEEEEcCCCCeeeecccch--hhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhh
Confidence 3566778888777532211000 01334444444444455555567789999999999999887643 2346
Q ss_pred hhhceEeccCc
Q 024971 78 CRGMILLNISL 88 (260)
Q Consensus 78 v~~lvl~~~~~ 88 (260)
++-+|+-+|-.
T Consensus 224 i~nViLAaPDi 234 (377)
T COG4782 224 IKNVILAAPDI 234 (377)
T ss_pred hhheEeeCCCC
Confidence 88888888754
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00064 Score=55.42 Aligned_cols=57 Identities=16% Similarity=0.146 Sum_probs=38.4
Q ss_pred CCccHHHHHHHHHHHHHhh-----c--------CCceEEEEeChhhHHHHHHHhh---CccchhhceEeccCc
Q 024971 32 PFYTFETWASQLNDFCKDV-----V--------KDQAFFICNSIGGLVGLQAAVM---EPEICRGMILLNISL 88 (260)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~-----~--------~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~~ 88 (260)
...++.+.++-+.+.++.+ + ...++++||||||.+|...+.. .++.|.-++..+++.
T Consensus 148 ~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 148 HGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 3457777777766666543 2 1249999999999999877642 244566677666654
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00054 Score=50.90 Aligned_cols=57 Identities=21% Similarity=0.308 Sum_probs=42.9
Q ss_pred ccHHHHH-HHHHHHHHhhcC-----CceEEEEeChhhHHHHHHHhhCccchhhceEeccCccc
Q 024971 34 YTFETWA-SQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRM 90 (260)
Q Consensus 34 ~~~~~~~-~~~~~~~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 90 (260)
+.++++. +++-..+++... +...++||||||.=|+.+|.++|++++.+..+++...+
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 5555554 345534443322 26789999999999999999999999999999987654
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.014 Score=46.89 Aligned_cols=88 Identities=13% Similarity=0.098 Sum_probs=61.4
Q ss_pred CCCccEEEEEcCCCCCCCCCCCC-CCCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNP-RDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
|..|+-....|.||=|.-...-. .........+++++...+.-+++.- ...+..+.|.|.||.++..++..+|+.+.
T Consensus 496 ld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~ 575 (712)
T KOG2237|consen 496 LDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFG 575 (712)
T ss_pred EecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhh
Confidence 34677777788998775432111 0001124557777777666666542 33578999999999999999999999999
Q ss_pred hceEeccCccc
Q 024971 80 GMILLNISLRM 90 (260)
Q Consensus 80 ~lvl~~~~~~~ 90 (260)
++|+--|....
T Consensus 576 avia~VpfmDv 586 (712)
T KOG2237|consen 576 AVIAKVPFMDV 586 (712)
T ss_pred hhhhcCcceeh
Confidence 99988876543
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.01 Score=43.19 Aligned_cols=35 Identities=29% Similarity=0.368 Sum_probs=32.2
Q ss_pred ceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 54 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
.-+|.|.|+||.+++..+..+|+++-.++..+|..
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 46899999999999999999999999999998864
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0012 Score=50.98 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHh
Q 024971 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 72 (260)
++.+.+.+++.+....++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 33445555555555568999999999999998765
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0018 Score=43.71 Aligned_cols=54 Identities=17% Similarity=0.044 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHHHHhhcC-----CceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 35 TFETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
-.+.-+.++..+++.+.. .++.++|||+|+.++-..+...+..+..+|+++++.
T Consensus 86 ~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 86 YARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 355666777777777632 368999999999999988877667799999998764
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0018 Score=50.18 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHh
Q 024971 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 72 (260)
++.+.+.++++.....++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45556667777666668999999999999998875
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0013 Score=50.55 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=33.0
Q ss_pred HhhcCCceEEEEeChhhHHHHHHHhhCcc--------chhhceEeccCc
Q 024971 48 KDVVKDQAFFICNSIGGLVGLQAAVMEPE--------ICRGMILLNISL 88 (260)
Q Consensus 48 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~ 88 (260)
+.-|.+|++||+||||+.+.+.+...+++ .+++++-++++.
T Consensus 177 ~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 177 KLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 33356899999999999999999988776 377888777654
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0013 Score=50.38 Aligned_cols=37 Identities=11% Similarity=0.152 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhh
Q 024971 37 ETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 37 ~~~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 73 (260)
+++.+++..+++..... ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 34556666667665433 68999999999999998864
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0014 Score=50.10 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=22.8
Q ss_pred HHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhh
Q 024971 42 QLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 42 ~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 73 (260)
.+..+++..... ++++.|||+||.+|+.+|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344444444333 38999999999999998854
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.004 Score=45.09 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=44.2
Q ss_pred cHHHHHHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 35 TFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
+...+.+.+..++.+.+++ ++++.|.|-||.++..++..+|+.+.++..++...
T Consensus 124 dVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 124 DVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 4445555566666677776 79999999999999999999999999999888764
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0097 Score=43.72 Aligned_cols=58 Identities=14% Similarity=-0.021 Sum_probs=44.2
Q ss_pred CccHHHHHHHHHHHHHhhc--CCceEEEEeChhhHHHHHHHhhCcc--chhhceEeccCccc
Q 024971 33 FYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNISLRM 90 (260)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~ 90 (260)
...+.+.++.+.+-+.... .+-+++||+|.||.++-.++.+.|+ .|+.+|.++++...
T Consensus 72 ~~~~~~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 72 LMPLTQQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred eeCHHHHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 4466677766665555421 1359999999999999999999987 49999999987544
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0032 Score=41.38 Aligned_cols=54 Identities=13% Similarity=0.214 Sum_probs=44.7
Q ss_pred CccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCcc
Q 024971 33 FYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (260)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 89 (260)
..+....++.+..++...+.+...|+|-|+||..|.+++.++. +++ |+++|...
T Consensus 39 ~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--ira-v~~NPav~ 92 (191)
T COG3150 39 PHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IRA-VVFNPAVR 92 (191)
T ss_pred CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Chh-hhcCCCcC
Confidence 3577888899999999998888999999999999999999885 444 45777653
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0029 Score=43.15 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=36.8
Q ss_pred cHHHHHHHHHHHHHh----hcCCceEEEEeChhhHHHHHHHhh------CccchhhceEeccCc
Q 024971 35 TFETWASQLNDFCKD----VVKDQAFFICNSIGGLVGLQAAVM------EPEICRGMILLNISL 88 (260)
Q Consensus 35 ~~~~~~~~~~~~~~~----~~~~~~~lvGhS~Gg~~a~~~a~~------~p~~v~~lvl~~~~~ 88 (260)
+...-+.++...++. ....+++|+|+|.|+.++..++.. ..++|.++++++-+.
T Consensus 59 S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 59 SVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 333444444444443 345689999999999999999877 235688888887654
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0025 Score=48.11 Aligned_cols=35 Identities=9% Similarity=0.076 Sum_probs=25.6
Q ss_pred HHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhhC
Q 024971 40 ASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 40 ~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
.+.+..+++..... ++++.|||+||.+|..+|...
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 34555666655433 589999999999999988653
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.004 Score=43.08 Aligned_cols=41 Identities=10% Similarity=0.094 Sum_probs=31.4
Q ss_pred ccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhC
Q 024971 34 YTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
....|..+....++++.+ .++++|+|||.|+.+..++..++
T Consensus 75 ~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 345555666666777774 45999999999999999998764
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0065 Score=48.95 Aligned_cols=79 Identities=15% Similarity=0.024 Sum_probs=50.5
Q ss_pred ccEEEEEcCC-C---CCCCCCCCCCCCCCCCCccHHHHHH---HHHHHHHhhcC--CceEEEEeChhhHHHHHHHhh--C
Q 024971 6 SHRVYSIDLI-G---YGYSDKPNPRDFFDKPFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVM--E 74 (260)
Q Consensus 6 ~~~v~~~D~~-G---~G~S~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~--~ 74 (260)
++-|+++++| | +..+..... .....+.|... .+.+-++.+|. +++.|+|+|.||..+..++.. .
T Consensus 125 ~~~vv~~~yRlg~~g~~~~~~~~~-----~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~ 199 (493)
T cd00312 125 NVIVVSINYRLGVLGFLSTGDIEL-----PGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDS 199 (493)
T ss_pred CEEEEEecccccccccccCCCCCC-----CcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcch
Confidence 3889999999 3 332221110 12333444443 44455555554 479999999999999888765 3
Q ss_pred ccchhhceEeccCcc
Q 024971 75 PEICRGMILLNISLR 89 (260)
Q Consensus 75 p~~v~~lvl~~~~~~ 89 (260)
+..++++|+.++...
T Consensus 200 ~~lf~~~i~~sg~~~ 214 (493)
T cd00312 200 KGLFHRAISQSGSAL 214 (493)
T ss_pred hHHHHHHhhhcCCcc
Confidence 456899999887653
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0036 Score=50.05 Aligned_cols=53 Identities=13% Similarity=0.082 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhC-----------c----cchhhceEeccCcc
Q 024971 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVME-----------P----EICRGMILLNISLR 89 (260)
Q Consensus 37 ~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~-----------p----~~v~~lvl~~~~~~ 89 (260)
+++-..+.++++.. +.++++|+||||||.+++.+...- + ..|++.|.++++..
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 34444455555543 357999999999999999987532 1 24899999998753
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0041 Score=48.77 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHh
Q 024971 38 TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 72 (260)
.....+.++++.....++++.|||+||.+|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 35555666676666668999999999999998874
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.005 Score=47.22 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhh
Q 024971 39 WASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 39 ~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 73 (260)
+.+.|..+++..... ++++.|||+||.+|+..|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 334555666655432 58999999999999988854
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0087 Score=41.11 Aligned_cols=82 Identities=15% Similarity=0.161 Sum_probs=51.0
Q ss_pred CCCCccEEEEEcCCC---CCCCCCCCCCCCCCCCCccHHHHHHHH-HHHHHhhcCCceEEEEeChhhHHHHHHHhhCcc-
Q 024971 2 VLAKSHRVYSIDLIG---YGYSDKPNPRDFFDKPFYTFETWASQL-NDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE- 76 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G---~G~S~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~- 76 (260)
+.+.||.|++.+--- +-.+...+. ....+..+.+..+ ..++.....+.++++.||.||...+.+..++|+
T Consensus 140 Av~~Gygviv~N~N~~~kfye~k~np~-----kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 140 AVAEGYGVIVLNPNRERKFYEKKRNPQ-----KYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred HHHcCCcEEEeCCchhhhhhhcccCcc-----hhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCc
Confidence 456788888876431 222222111 1222333334333 344445566789999999999999999999874
Q ss_pred -chhhceEeccCc
Q 024971 77 -ICRGMILLNISL 88 (260)
Q Consensus 77 -~v~~lvl~~~~~ 88 (260)
+|.++.+.+.+.
T Consensus 215 ~~v~aialTDs~~ 227 (297)
T KOG3967|consen 215 ESVFAIALTDSAM 227 (297)
T ss_pred cceEEEEeecccc
Confidence 577777777663
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0062 Score=46.65 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhc----CCceEEEEeChhhHHHHHHHhh
Q 024971 38 TWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 38 ~~~~~~~~~~~~~~----~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
++.+.+..+++.+. ..++++.|||+||.+|+..|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34445566665552 1368999999999999988753
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0064 Score=45.73 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=30.8
Q ss_pred cCCceEEEEeChhhHHHHHHHhhCccc-----hhhceEeccCc
Q 024971 51 VKDQAFFICNSIGGLVGLQAAVMEPEI-----CRGMILLNISL 88 (260)
Q Consensus 51 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~-----v~~lvl~~~~~ 88 (260)
+.+|+.|||||+|+.+...+...-.++ |+.+++++.+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 667999999999999998877654433 78889998764
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0066 Score=47.65 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhh
Q 024971 39 WASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 39 ~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 73 (260)
+.+.+..+++....+ ++++.|||+||.+|..+|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 334555556555332 68999999999999988764
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0076 Score=47.52 Aligned_cols=35 Identities=11% Similarity=0.149 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhhcC-----CceEEEEeChhhHHHHHHHhh
Q 024971 39 WASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 39 ~~~~~~~~~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
+.+.+..+++.... .++++.|||+||.+|+..|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34445556655532 379999999999999998853
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.016 Score=45.51 Aligned_cols=59 Identities=24% Similarity=0.111 Sum_probs=45.6
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhccC------------------------CC-ccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNFD------------------------SV-EDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
.++||+..|..|.+++.-..+.+.+.+ .+ .+++.+.+|||+.. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 479999999999999876555433221 22 45677889999996 59999999999
Q ss_pred Hhhhh
Q 024971 240 HTLSY 244 (260)
Q Consensus 240 ~~l~~ 244 (260)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99853
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0086 Score=47.15 Aligned_cols=35 Identities=14% Similarity=0.126 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhhc----CCceEEEEeChhhHHHHHHHhh
Q 024971 39 WASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 39 ~~~~~~~~~~~~~----~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
..+++..+++.+. ..++++.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4456666666553 1268999999999999988854
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0096 Score=46.93 Aligned_cols=35 Identities=11% Similarity=0.071 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhhc-----C-CceEEEEeChhhHHHHHHHh
Q 024971 38 TWASQLNDFCKDVV-----K-DQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 38 ~~~~~~~~~~~~~~-----~-~~~~lvGhS~Gg~~a~~~a~ 72 (260)
++.+.|..+++... . -++++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34445556666552 1 26999999999999998875
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.011 Score=46.61 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhcC-----CceEEEEeChhhHHHHHHHhh
Q 024971 39 WASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 39 ~~~~~~~~~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
+...+..+++.... .++++.|||+||.+|..+|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 33445555555432 268999999999999998853
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.023 Score=43.19 Aligned_cols=60 Identities=23% Similarity=0.196 Sum_probs=44.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCcc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPE 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~ 76 (260)
+|+.|+.+|-.-|=.|.+ +.++.++|+..+++.+ +..++.|+|+|+|+=+.-..-.+.|.
T Consensus 286 ~gvpVvGvdsLRYfW~~r------------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 286 QGVPVVGVDSLRYFWSER------------TPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred CCCceeeeehhhhhhccC------------CHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 578888888554544444 5678888888888876 55789999999999877665555553
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.019 Score=43.85 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=30.8
Q ss_pred ceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 54 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
|++++|+|.||.+|..+|.-.|..+++++=-++..
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 89999999999999999999999998888666543
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.032 Score=41.07 Aligned_cols=57 Identities=14% Similarity=0.008 Sum_probs=42.8
Q ss_pred ccHHHHHHHHHHHHHhhc--CCceEEEEeChhhHHHHHHHhhCcc--chhhceEeccCccc
Q 024971 34 YTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE--ICRGMILLNISLRM 90 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~ 90 (260)
..+.+.++.+.+-+.... .+-+++||+|.||.++-.++.+.|+ .|+.+|.++++...
T Consensus 74 ~~~~~Qv~~vce~l~~~~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 74 MPLRQQASIACEKIKQMKELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred cCHHHHHHHHHHHHhcchhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 355666666655554421 1359999999999999999999987 49999999987543
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.03 Score=45.00 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=18.2
Q ss_pred CceEEEEeChhhHHHHHHHhh
Q 024971 53 DQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 378999999999999988754
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.051 Score=42.84 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=50.4
Q ss_pred CccEEEEEcCC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHhh---
Q 024971 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (260)
Q Consensus 5 ~~~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~~--- 73 (260)
+..+++-+|.| |.|.|-...+. ...+-++.++++..+++.. ...+++|.|.|+||..+-.+|..
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~-----~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~ 190 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPI-----ERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISK 190 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCC-----CccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHh
Confidence 44689999955 89998654321 1122223445555555543 23589999999999876666543
Q ss_pred -C------ccchhhceEeccCcc
Q 024971 74 -E------PEICRGMILLNISLR 89 (260)
Q Consensus 74 -~------p~~v~~lvl~~~~~~ 89 (260)
. +-.++|+++.++...
T Consensus 191 ~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 191 GNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred hcccccCCceeeeeEEecCcccC
Confidence 1 113678888887654
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.03 Score=42.55 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhh
Q 024971 37 ETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4566777777777776689999999999999988864
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.051 Score=39.61 Aligned_cols=54 Identities=15% Similarity=-0.040 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHhhc--CCceEEEEeChhhHHHHHHHhhCcc-chhhceEeccCcc
Q 024971 36 FETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNISLR 89 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~ 89 (260)
+.+.++.+.+.++... .+-++++|+|.||.++-.++.++|+ .|+.+|.++++..
T Consensus 61 v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred HHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 3444444444444321 1459999999999999999999865 5999999998753
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.13 Score=36.68 Aligned_cols=65 Identities=9% Similarity=-0.054 Sum_probs=41.4
Q ss_pred ccEEEEEcCCCC-CCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhC
Q 024971 6 SHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 6 ~~~v~~~D~~G~-G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
|+.+..+++|.. +--...... ....+..+-++.+.+.++.. ..++++++|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~----t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSP----TYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCC----ccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 677888888862 211000000 13446666667777666652 336899999999999999877653
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.045 Score=43.02 Aligned_cols=59 Identities=22% Similarity=0.057 Sum_probs=46.0
Q ss_pred CCEEEEecCCCCCCChHHHHHhhcc-------------------------CCCccEEEeCCCCCCcchhchhHHHHHHHH
Q 024971 186 CPVLIAWGDKDPWEPIELGRAYGNF-------------------------DSVEDFIVLPNVGHCPQVSLYLSLSSACLH 240 (260)
Q Consensus 186 ~P~l~i~g~~D~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 240 (260)
.++++..|+.|.++|.-..+.+.+. ..+..+..+.|+||++..++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999987655543211 011245778899999999999999999999
Q ss_pred hhhh
Q 024971 241 TLSY 244 (260)
Q Consensus 241 ~l~~ 244 (260)
|+..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9964
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.15 Score=41.17 Aligned_cols=86 Identities=16% Similarity=0.106 Sum_probs=54.8
Q ss_pred CCCccEEEEEcCCCCCCCCCCCC-CCCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNP-RDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
|.+|..-+..++||=|+=.+.-. ..........++|++..+..++++- ..+++-+.|-|-||.+.-.+..++||.+.
T Consensus 447 LerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfg 526 (648)
T COG1505 447 LERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFG 526 (648)
T ss_pred HhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhC
Confidence 56777788889998776432100 0000012334555555444444432 12468899999999999999999999888
Q ss_pred hceEeccCc
Q 024971 80 GMILLNISL 88 (260)
Q Consensus 80 ~lvl~~~~~ 88 (260)
++|.--|..
T Consensus 527 A~v~evPll 535 (648)
T COG1505 527 AAVCEVPLL 535 (648)
T ss_pred ceeeccchh
Confidence 877666653
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.043 Score=43.92 Aligned_cols=55 Identities=20% Similarity=0.381 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHHHHHhhc---CCceEEEEeChhhHHHHHHHhh-----Ccc------chhhceEeccCc
Q 024971 34 YTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVM-----EPE------ICRGMILLNISL 88 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a~~-----~p~------~v~~lvl~~~~~ 88 (260)
.++..-...+.+.+.+.+ .++++.+||||||.++=.+... .|+ ..+|+++++.+.
T Consensus 504 ~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 504 RSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 345555555555555553 3589999999999888766532 333 256788877764
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.17 Score=33.29 Aligned_cols=35 Identities=11% Similarity=-0.043 Sum_probs=28.0
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchhhceEeccCcc
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 89 (260)
+.+.+|++|||-.+|-++....+ +++.+.+++...
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCCC
Confidence 46789999999999999987765 677777776543
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.1 Score=41.10 Aligned_cols=79 Identities=22% Similarity=0.132 Sum_probs=51.3
Q ss_pred ccEEEEEcCC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-------c--CCceEEEEeChhhHHHHHHHhhCc
Q 024971 6 SHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------V--KDQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 6 ~~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
.-.++-+|+| |.|.|....+ ...-+.....+|+..+.+.+ . ..+.+|+|-|+||.-+-.+|..--
T Consensus 146 ~adLvFiDqPvGTGfS~a~~~-----e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~ 220 (498)
T COG2939 146 FADLVFIDQPVGTGFSRALGD-----EKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELL 220 (498)
T ss_pred CCceEEEecCcccCccccccc-----ccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHH
Confidence 3468889955 9999975222 13334555555555444433 2 248999999999999888886544
Q ss_pred c---chhhceEeccCcc
Q 024971 76 E---ICRGMILLNISLR 89 (260)
Q Consensus 76 ~---~v~~lvl~~~~~~ 89 (260)
+ ..++++++++...
T Consensus 221 ~~~~~~~~~~nlssvli 237 (498)
T COG2939 221 EDNIALNGNVNLSSVLI 237 (498)
T ss_pred HhccccCCceEeeeeee
Confidence 3 3667777766543
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.085 Score=36.04 Aligned_cols=60 Identities=13% Similarity=0.062 Sum_probs=43.1
Q ss_pred CCCEEEEecCCCCCCChHHHHH---hhccCCC--ccEEEeCCCCCCcchhc---hhHHHHHHHHhhhh
Q 024971 185 KCPVLIAWGDKDPWEPIELGRA---YGNFDSV--EDFIVLPNVGHCPQVSL---YLSLSSACLHTLSY 244 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~---~~~~~~~--~~~~~~~~~gH~~~~~~---p~~~~~~i~~~l~~ 244 (260)
+++.+-|-|+.|.++.+..... +...+|. ...++.+|+||+....- .+++...|.+|+..
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 3778889999999988765544 4444553 35667899999866542 56788888888753
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.1 Score=41.74 Aligned_cols=88 Identities=20% Similarity=0.163 Sum_probs=56.3
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHH--------HHHHHHHHHhh-c--CCceEEEEeChhhHHHHHH
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETW--------ASQLNDFCKDV-V--KDQAFFICNSIGGLVGLQA 70 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~--~~~~~lvGhS~Gg~~a~~~ 70 (260)
.|++||.+++-|- ||..+.......+. .....+.++ +.--+++++.+ + .+.-+..|.|-||.-++..
T Consensus 55 ~~~~G~A~~~TD~-Gh~~~~~~~~~~~~-~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~ 132 (474)
T PF07519_consen 55 ALARGYATASTDS-GHQGSAGSDDASFG-NNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMA 132 (474)
T ss_pred hhhcCeEEEEecC-CCCCCccccccccc-CCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHH
Confidence 3678999999884 56544331000000 111122222 22233444444 2 3467899999999999999
Q ss_pred HhhCccchhhceEeccCcccc
Q 024971 71 AVMEPEICRGMILLNISLRML 91 (260)
Q Consensus 71 a~~~p~~v~~lvl~~~~~~~~ 91 (260)
|.+||+.++|++.-+|.....
T Consensus 133 AQryP~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 133 AQRYPEDFDGILAGAPAINWT 153 (474)
T ss_pred HHhChhhcCeEEeCCchHHHH
Confidence 999999999999999987543
|
It also includes several bacterial homologues of unknown function. |
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.78 Score=34.97 Aligned_cols=64 Identities=11% Similarity=0.112 Sum_probs=48.2
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCcchh-chhHHHHHHHHhhhhcccc
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQVS-LYLSLSSACLHTLSYLHTC 248 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~~-~p~~~~~~i~~~l~~~~~~ 248 (260)
..+.+.+++..|.++|....+.+.+. .-+++-+-+.++-|..+.. .|....+...+|++...+.
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 46778888999999998887776332 3345555667788976654 6999999999999877554
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.21 Score=35.73 Aligned_cols=34 Identities=18% Similarity=0.197 Sum_probs=27.0
Q ss_pred ceEEEEeChhhHHHHHHHhhCccchhhceEeccC
Q 024971 54 QAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 54 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
|++-+|||+|+.+-+.+...++..-++-++++-.
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 6788999999999998887776555677777753
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.17 Score=33.77 Aligned_cols=36 Identities=14% Similarity=0.144 Sum_probs=32.2
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
....+-|-||||..|..+.-++|+.+.++|.+++..
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 356677999999999999999999999999999864
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.23 Score=36.11 Aligned_cols=33 Identities=9% Similarity=0.101 Sum_probs=24.1
Q ss_pred CCceEEEEeChhhHHHHHHHhhCccchhhceEecc
Q 024971 52 KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (260)
Q Consensus 52 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 86 (260)
..++.+-|||+||.+|..+..++. +-.+.+-+|
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 347889999999999998887764 334444444
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.23 Score=36.11 Aligned_cols=33 Identities=9% Similarity=0.101 Sum_probs=24.1
Q ss_pred CCceEEEEeChhhHHHHHHHhhCccchhhceEecc
Q 024971 52 KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNI 86 (260)
Q Consensus 52 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 86 (260)
..++.+-|||+||.+|..+..++. +-.+.+-+|
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 347889999999999998887764 334444444
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.2 Score=39.48 Aligned_cols=55 Identities=13% Similarity=0.027 Sum_probs=40.3
Q ss_pred ccHHHHH---HHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhh--CccchhhceEeccCc
Q 024971 34 YTFETWA---SQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVM--EPEICRGMILLNISL 88 (260)
Q Consensus 34 ~~~~~~~---~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~ 88 (260)
..+.|++ +.+.+-|+++|.+ +|.|+|+|.||+.++.+.+. ....++++|+.++..
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 4455555 4556778888754 69999999999988877654 224588888888875
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=92.15 E-value=4.7 Score=32.27 Aligned_cols=48 Identities=13% Similarity=-0.020 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhhCccchhhceEeccC
Q 024971 38 TWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 38 ~~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
.+.+-|.+.++.||.+ .++|-|.|||..-|+.+++... ..++|+--|.
T Consensus 340 ~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL 389 (511)
T TIGR03712 340 GIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPL 389 (511)
T ss_pred HHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcc
Confidence 3445566777888775 6899999999999999998753 2455554443
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.93 E-value=0.54 Score=37.25 Aligned_cols=85 Identities=14% Similarity=0.054 Sum_probs=50.1
Q ss_pred ccEEEEEcCC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhh----Cc--
Q 024971 6 SHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVM----EP-- 75 (260)
Q Consensus 6 ~~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~----~p-- 75 (260)
--.++-+|.| |.|.|-...+.+....+..+.++.-+.+..++++. ..++++|.|-|++|...-.+|.+ ..
T Consensus 117 ~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~ 196 (454)
T KOG1282|consen 117 EANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKC 196 (454)
T ss_pred cccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccc
Confidence 3578889988 88888654432111112223333333344444433 34689999999999776666643 21
Q ss_pred ----cchhhceEeccCccc
Q 024971 76 ----EICRGMILLNISLRM 90 (260)
Q Consensus 76 ----~~v~~lvl~~~~~~~ 90 (260)
-.++|+++-+|....
T Consensus 197 ~~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 197 CKPNINLKGYAIGNGLTDP 215 (454)
T ss_pred cCCcccceEEEecCcccCc
Confidence 236788877776543
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.64 Score=33.70 Aligned_cols=56 Identities=14% Similarity=0.036 Sum_probs=40.0
Q ss_pred ccHHHHHHHHHHHHHhhc--CCceEEEEeChhhHHHHHHHhhCcc-chhhceEeccCcc
Q 024971 34 YTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILLNISLR 89 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~ 89 (260)
..+.+.++.+.+.++... .+-++++|.|.||.++-.++...++ .|+.+|.++++-.
T Consensus 71 ~pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 71 MPLWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred ccHHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 345566665555555332 1358999999999999999887654 4889998887643
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.52 Score=41.77 Aligned_cols=57 Identities=18% Similarity=0.087 Sum_probs=43.9
Q ss_pred CccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCc--cchhhceEeccCcc
Q 024971 33 FYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEP--EICRGMILLNISLR 89 (260)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~ 89 (260)
..++++.+.....-++++.. .|+.++|+|+|+.++..+|.... +....+|++++.+.
T Consensus 2161 ~dSies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2161 LDSIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred cchHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 35788888877777777754 58999999999999999986543 23566999988754
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=91.36 E-value=0.34 Score=39.60 Aligned_cols=56 Identities=14% Similarity=-0.010 Sum_probs=38.5
Q ss_pred CccHHHHHH---HHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhC--ccchhhceEeccCc
Q 024971 33 FYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVME--PEICRGMILLNISL 88 (260)
Q Consensus 33 ~~~~~~~~~---~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 88 (260)
.+.+.|+.. .|.+-|..+|. ++|.|+|||.||..+...+..- ...++++|+.++..
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 455555554 45566666765 4799999999999887766542 24699999999854
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=90.92 E-value=0.14 Score=39.32 Aligned_cols=77 Identities=14% Similarity=0.095 Sum_probs=61.5
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc---CCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 8 ~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
+-+.+++|-+|.|.+.+.. -...++++-+.|...+++.+. .++.+--|-|=||+.++.+=.-||+-|++.|..
T Consensus 90 NQl~vEhRfF~~SrP~p~D----W~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaY 165 (448)
T PF05576_consen 90 NQLSVEHRFFGPSRPEPAD----WSYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAY 165 (448)
T ss_pred ceEEEEEeeccCCCCCCCC----cccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeee
Confidence 4577899999999776532 256789999999998888874 257788899999999998888899999998876
Q ss_pred ccCc
Q 024971 85 NISL 88 (260)
Q Consensus 85 ~~~~ 88 (260)
..+.
T Consensus 166 VAP~ 169 (448)
T PF05576_consen 166 VAPN 169 (448)
T ss_pred eccc
Confidence 6554
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=89.71 E-value=1.2 Score=33.37 Aligned_cols=79 Identities=18% Similarity=0.175 Sum_probs=54.6
Q ss_pred cEEEEEcCC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHhhCcc--
Q 024971 7 HRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVMEPE-- 76 (260)
Q Consensus 7 ~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~p~-- 76 (260)
..++-+|-| |.|.|-..... .-..+.++.+.|+.++++.+ ...|++++..|+||-+|..++...-+
T Consensus 72 adllfvDnPVGaGfSyVdg~~----~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aI 147 (414)
T KOG1283|consen 72 ADLLFVDNPVGAGFSYVDGSS----AYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAI 147 (414)
T ss_pred ccEEEecCCCcCceeeecCcc----cccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHH
Confidence 456777776 78887544321 12346788899999999886 23489999999999999888764322
Q ss_pred -------chhhceEeccCcc
Q 024971 77 -------ICRGMILLNISLR 89 (260)
Q Consensus 77 -------~v~~lvl~~~~~~ 89 (260)
.+.+++|=++.+.
T Consensus 148 k~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 148 KRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred hcCceeecceeEEccCcccC
Confidence 2456666666553
|
|
| >PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 | Back alignment and domain information |
|---|
Probab=87.86 E-value=0.5 Score=35.84 Aligned_cols=30 Identities=20% Similarity=0.122 Sum_probs=24.1
Q ss_pred HHHHHhhcCCceEEEEeChhhHHHHHHHhh
Q 024971 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 44 ~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
.++++..|+++-.++|||+|=+.|+.++..
T Consensus 75 ~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 75 ARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhcccccccceeeccchhhHHHHHHCCc
Confidence 455677788899999999999888877654
|
3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A .... |
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=87.14 E-value=0.69 Score=36.81 Aligned_cols=40 Identities=15% Similarity=0.134 Sum_probs=30.9
Q ss_pred hcCCceEEEEeChhhHHHHHHHhhC-----ccchhhceEeccCcc
Q 024971 50 VVKDQAFFICNSIGGLVGLQAAVME-----PEICRGMILLNISLR 89 (260)
Q Consensus 50 ~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~ 89 (260)
.|.+|+.|||+|.|+-+...+...- -..|..+++++.+..
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 4778999999999999988665432 234888999988753
|
|
| >smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=86.58 E-value=0.97 Score=33.85 Aligned_cols=31 Identities=10% Similarity=0.052 Sum_probs=25.0
Q ss_pred HHHHHhhcCCceEEEEeChhhHHHHHHHhhC
Q 024971 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 44 ~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
.++++..|+++-.++|||+|-..|+.++...
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~~ 103 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAGVL 103 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhCCC
Confidence 3556777889999999999999988777543
|
|
| >TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit | Back alignment and domain information |
|---|
Probab=85.95 E-value=1.1 Score=33.53 Aligned_cols=31 Identities=10% Similarity=-0.061 Sum_probs=24.7
Q ss_pred HHHHHhhcCCceEEEEeChhhHHHHHHHhhC
Q 024971 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 44 ~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
.++++..+.++..++|||+|-..|+.++...
T Consensus 67 ~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 67 WRALLALLPRPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred HHHHHhcCCCCcEEeecCHHHHHHHHHhCCC
Confidence 4556667888999999999999888877543
|
Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group. |
| >PRK10279 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=85.75 E-value=1.2 Score=33.47 Aligned_cols=37 Identities=24% Similarity=0.142 Sum_probs=28.2
Q ss_pred HHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 43 ~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+.+.++..++..-.++|.|+|+.++..||....+.+.
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~~l~ 59 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALE 59 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChHHHH
Confidence 4455666788888899999999999999976544333
|
|
| >TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase | Back alignment and domain information |
|---|
Probab=83.51 E-value=1.5 Score=32.62 Aligned_cols=30 Identities=23% Similarity=0.048 Sum_probs=23.6
Q ss_pred HHHHhhc-CCceEEEEeChhhHHHHHHHhhC
Q 024971 45 DFCKDVV-KDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 45 ~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
..++..+ +++..++|||+|=+.|+.++...
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445556 88999999999999888887654
|
The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension. |
| >cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7 | Back alignment and domain information |
|---|
Probab=83.26 E-value=2.1 Score=32.29 Aligned_cols=32 Identities=16% Similarity=0.069 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCceEEEEeChhhHHHHHHHhhC
Q 024971 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 43 ~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
+.+.++..++..-.++|.|+|+.++..+|..+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 44555666777778899999999999999864
|
Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE |
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.72 E-value=0.59 Score=36.00 Aligned_cols=33 Identities=27% Similarity=0.378 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhhcCCceEEEEeChhhHHHHHHH
Q 024971 39 WASQLNDFCKDVVKDQAFFICNSIGGLVGLQAA 71 (260)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a 71 (260)
.++++.+.+....++++..+|||.||.++..+.
T Consensus 136 la~~~~e~~~~~si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 136 LAEEVKETLYDYSIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred cHHHHhhhhhccccceeeeeeeecCCeeeeEEE
Confidence 344455555555578999999999999876543
|
|
| >cd07198 Patatin Patatin-like phospholipase | Back alignment and domain information |
|---|
Probab=82.40 E-value=2.5 Score=28.70 Aligned_cols=33 Identities=12% Similarity=0.003 Sum_probs=25.3
Q ss_pred HHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc
Q 024971 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 43 ~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
+.+.++..+...-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344445557777789999999999999998654
|
Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family. |
| >cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases | Back alignment and domain information |
|---|
Probab=81.97 E-value=7.3 Score=27.39 Aligned_cols=52 Identities=13% Similarity=-0.076 Sum_probs=38.6
Q ss_pred CCccHHHHHHHHHHHHHhhcCCceEEEEeCh----hhHHHHHHHhhCc-cchhhceEe
Q 024971 32 PFYTFETWASQLNDFCKDVVKDQAFFICNSI----GGLVGLQAAVMEP-EICRGMILL 84 (260)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~----Gg~~a~~~a~~~p-~~v~~lvl~ 84 (260)
..++.+.+++.+.++++..+ -.++++|+|. |.-++-++|++.. ..+..++-+
T Consensus 89 ~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 89 AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 35678899999999998877 5789999998 8888888887642 234444443
|
ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit. |
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=81.97 E-value=3.1 Score=32.48 Aligned_cols=56 Identities=14% Similarity=0.242 Sum_probs=35.2
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcch-----hchhHHHHHHHHhh
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV-----SLYLSLSSACLHTL 242 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~p~~~~~~i~~~l 242 (260)
.-.+++|+|++|++..... .+.+-..++.+.+.||++|..-+ +..++....|.+|.
T Consensus 351 ~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred CCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 3569999999999764221 12222345677788999996543 33445556666665
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2 | Back alignment and domain information |
|---|
Probab=80.71 E-value=3.1 Score=28.87 Aligned_cols=31 Identities=10% Similarity=-0.107 Sum_probs=23.8
Q ss_pred HHHHHhhcCCceEEEEeChhhHHHHHHHhhC
Q 024971 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 44 ~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
.+.++..+...-.++|-|.||.+|..++...
T Consensus 18 l~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3344455666678999999999999999754
|
ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 260 | ||||
| 1j1i_A | 296 | Crystal Structure Of A His-Tagged Serine Hydrolase | 3e-10 | ||
| 2xt0_A | 297 | Dehalogenase Dppa From Plesiocystis Pacifica Sir-I | 7e-06 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 2e-05 | ||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 2e-05 | ||
| 1wom_A | 271 | Crystal Structure Of Rsbq Length = 271 | 4e-05 | ||
| 4f60_A | 299 | Crystal Structure Of Rhodococcus Rhodochrous Haloal | 1e-04 | ||
| 4f5z_A | 299 | Crystal Structure Of Rhodococcus Rhodochrous Haloal | 2e-04 | ||
| 1bn6_A | 294 | Haloalkane Dehalogenase From A Rhodococcus Species | 4e-04 | ||
| 1cqw_A | 295 | Nai Cocrystallised With Haloalkane Dehalogenase Fro | 4e-04 | ||
| 3fbw_A | 299 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 4e-04 | ||
| 3g9x_A | 299 | Structure Of Haloalkane Dehalogenase Dhaa14 Mutant | 6e-04 | ||
| 3fwh_A | 299 | Structure Of Haloalkane Dehalogenase Mutant Dha15 ( | 6e-04 | ||
| 3rk4_A | 299 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 7e-04 | ||
| 4fwb_A | 292 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 7e-04 | ||
| 2ocg_A | 254 | Crystal Structure Of Human Valacyclovir Hydrolase L | 9e-04 | ||
| 2ock_A | 254 | Crystal Structure Of Valacyclovir Hydrolase D123n M | 9e-04 |
| >pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase Involved In The Carbazole Degradation (Carc Enzyme) Length = 296 | Back alignment and structure |
|
| >pdb|2XT0|A Chain A, Dehalogenase Dppa From Plesiocystis Pacifica Sir-I Length = 297 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|1WOM|A Chain A, Crystal Structure Of Rsbq Length = 271 | Back alignment and structure |
|
| >pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant (t148l, G171q, A172v, C176f) Length = 299 | Back alignment and structure |
|
| >pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant (l95v, A172v) Length = 299 | Back alignment and structure |
|
| >pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species Length = 294 | Back alignment and structure |
|
| >pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A Rhodococcus Species Length = 295 | Back alignment and structure |
|
| >pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Dhaa Mutant C176y Length = 299 | Back alignment and structure |
|
| >pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f From Rhodococcus Rhodochrous Length = 299 | Back alignment and structure |
|
| >pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15 (I135fC176Y) FROM Rhodococcus Rhodochrous Length = 299 | Back alignment and structure |
|
| >pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant Dhaa31 Length = 299 | Back alignment and structure |
|
| >pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 - Trichloropropane Length = 292 | Back alignment and structure |
|
| >pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase Length = 254 | Back alignment and structure |
|
| >pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant Length = 254 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 1e-46
Identities = 44/236 (18%), Positives = 95/236 (40%), Gaps = 40/236 (16%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICN 60
+LA+ +RV ++D++G+G + KP+ YT + L+DF K + + + N
Sbjct: 61 ILARHYRVIAMDMLGFGKTAKPDIE-------YTQDRRIRHLHDFIKAMNFDGKVSIVGN 113
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKK--QPWYGRPLIRSFQNLLRNTAAGK 118
S+GG GL +V+ E+ ++L+ + ++ I + +P R
Sbjct: 114 SMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTR------------- 160
Query: 119 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI----CYSGG 174
E + +++ ND ++ + ++ + ++ + G
Sbjct: 161 ---------EGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGL 211
Query: 175 PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQV 228
E + +V+ P L+ G D P+E + + DS ++P+ GH +
Sbjct: 212 FYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDS--WGYIIPHCGHWAMI 265
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-42
Identities = 44/235 (18%), Positives = 86/235 (36%), Gaps = 36/235 (15%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L+K +RV + D++G+G++D+P + Y+ ++W + + ++A + N+
Sbjct: 50 ALSKFYRVIAPDMVGFGFTDRPENYN------YSKDSWVDHIIGIMDALEIEKAHIVGNA 103
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG + + A+ E M+L+ R + T +
Sbjct: 104 FGGGLAIATALRYSERVDRMVLMG-----------AAGTRFDV---------TEGLNAVW 143
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI------CYSGGP 175
+ E++RN+L D S VT+EL + ++ G + F
Sbjct: 144 GYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALA 203
Query: 176 LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQV 228
+E + + LI G +D P+ G + V GH Q+
Sbjct: 204 SSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRA--QLHVFGRCGHWTQI 256
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-34
Identities = 40/234 (17%), Positives = 75/234 (32%), Gaps = 28/234 (11%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLA+ V ++D GYG+SDK A L + + + N+
Sbjct: 61 VLARHFHVLAVDQPGYGHSDKRAEHG------QFNRYAAMALKGLFDQLGLGRVPLVGNA 114
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG ++ A+ P ++L+ L + +
Sbjct: 115 LGGGTAVRFALDYPARAGRLVLMGPG----------GLSINLFAPDPTEGVKRLSK---F 161
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI-----CYSGGPL 176
+ T E++ L D + +T ELV++ + +
Sbjct: 162 SVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGM 221
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQV 228
+ +++ PVL+ WG +D P++ + V GH QV
Sbjct: 222 MWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRA--QLHVFGQCGHWVQV 273
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-33
Identities = 44/241 (18%), Positives = 75/241 (31%), Gaps = 46/241 (19%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +RV D G+ SD + A + + D+A + N++
Sbjct: 60 VDAGYRVILKDSPGFNKSDAVVMDE------QRGLVNARAVKGLMDALDIDRAHLVGNAM 113
Query: 63 GGLVGLQAAVMEPEICRGMIL---------LNISLRMLHIKK-QPWYGRPLIRSFQNLLR 112
GG L A+ P+ +IL + + M IK Y P + + +L+
Sbjct: 114 GGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQ 173
Query: 113 NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVE---KILQPGLETGAADVFLEFI 169
Y D S +TEEL++ + +Q E +
Sbjct: 174 V-----FLY------------------DQSLITEELLQGRWEAIQRQPEHLKNFLISAQK 210
Query: 170 CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQ 227
L ++K I WG D + P++ G D+ V G Q
Sbjct: 211 APLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDA--RLHVFSKCGAWAQ 268
Query: 228 V 228
Sbjct: 269 W 269
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 2e-33
Identities = 44/234 (18%), Positives = 77/234 (32%), Gaps = 32/234 (13%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +RV +D G+G SD + A L + + + NS+
Sbjct: 63 VEAGYRVILLDCPGWGKSDSVVNSG------SRSDLNARILKSVVDQLDIAKIHLLGNSM 116
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG + + PE ++L+ + I+ L R
Sbjct: 117 GGHSSVAFTLKWPERVGKLVLMGGG--TGGMSLFTPMPTEGIKRLNQLYRQ--------- 165
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQ------PGLETGAADVFLEFICYSGGPL 176
T E+++ ++ DTS +T+ L E L LE + P
Sbjct: 166 --PTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEAN---PKQFPD 220
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQV 228
L ++K LI WG D + P++ G + S + + + GH Q
Sbjct: 221 FGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGS--ELHIFRDCGHWAQW 272
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-33
Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 30/236 (12%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
LA++ V + DLIG+G S+ P + Q+ +++ + NS
Sbjct: 54 DLAENFFVVAPDLIGFGQSEY--PETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNS 111
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG V LQ V PE + L+ ++ +P L+ + +
Sbjct: 112 MGGAVTLQLVVEAPERFDKVALMGSVGAPMNA--RPPELARLLAFYAD------------ 157
Query: 122 KMVATSESVRNILCQCYNDTSQV--TEELVEKILQPGLETGAADVFLEFI-----CYSGG 174
R ++ D EE+V+ + + +
Sbjct: 158 ---PRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESL 214
Query: 175 PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQV 228
+P L ++ VL+ G +D P++ + + +VL GH Q+
Sbjct: 215 VIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHA--ELVVLDRCGHWAQL 268
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-28
Identities = 40/230 (17%), Positives = 78/230 (33%), Gaps = 33/230 (14%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNS 61
+ +R Y++D+IG P + T +A+ L D D + +++ I S
Sbjct: 90 WSSKYRTYAVDIIGDKNKSIP------ENVSGTRTDYANWLLDVF-DNLGIEKSHMIGLS 142
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GGL + + PE + +L+ F + A G
Sbjct: 143 LGGLHTMNFLLRMPERVKSAAILS--------------PAETFLPFHHDFYKYALG---- 184
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ S V L ND + + V++ + + +E L
Sbjct: 185 --LTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEEL 242
Query: 182 PQVKCPVLIAWGDKDP-WEPIELGRAYGNF--DSVEDFIVLPNVGHCPQV 228
+ P+L+ G+ + ++P +F D + V+ N GH +
Sbjct: 243 RSARVPILLLLGEHEVIYDPHSALHRASSFVPDI--EAEVIKNAGHVLSM 290
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-27
Identities = 48/245 (19%), Positives = 97/245 (39%), Gaps = 33/245 (13%)
Query: 2 VLAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICN 60
VLA + +RV ++D +G+ S KP Y+F+ A+ + + + +A I +
Sbjct: 68 VLADAGYRVIAVDQVGFCKSSKPAHYQ------YSFQQLAANTHALLERLGVARASVIGH 121
Query: 61 SIGGLVGLQAAVMEPEICRGMILLN-ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
S+GG++ + A++ P ++L+N I L PW R + ++ L+ +A G
Sbjct: 122 SMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPW--RSVDDWYRRDLQTSAEGIR 179
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEE 179
Y+ + + + G E+ A + L + P+ E
Sbjct: 180 QYQQATYYAGEWRP------EFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYE 233
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF----------------IVLPNVG 223
L +++ P L+ G+KD + + ++ + P++G
Sbjct: 234 -LDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLG 292
Query: 224 HCPQV 228
H PQ+
Sbjct: 293 HTPQI 297
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 4e-24
Identities = 29/227 (12%), Positives = 63/227 (27%), Gaps = 30/227 (13%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
++ +DL G G SD + P + + + + + + +S GG +
Sbjct: 50 YQRIYLDLPGMGNSDPIS-------PSTSDNVLETLIEAIEEIIGARRFILYGHSYGGYL 102
Query: 67 GLQAAVMEPEICRGMILLN-ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVA 125
A + G+ L + + + L + V
Sbjct: 103 AQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVI 162
Query: 126 TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI--CYSGGPLPEELLPQ 183
+ + ++ PGL+ F++ + YS +
Sbjct: 163 INNQAW---------------HDYQNLIIPGLQK-EDKTFIDQLQNNYSFTFEEKLKNIN 206
Query: 184 VKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQV 228
+ P I G D + N + + ++L GH +
Sbjct: 207 YQFPFKIMVGRNDQVVGYQEQLKLINHNENG--EIVLLNRTGHNLMI 251
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-23
Identities = 49/228 (21%), Positives = 72/228 (31%), Gaps = 38/228 (16%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
K V + D GYG+S P RDF P FE A D K + + + S
Sbjct: 48 NKKLFTVVAWDPRGYGHSRPP-DRDF---PADFFERDAKDAVDLMKALKFKKVSLLGWSD 103
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG+ L AA P M++ + + + G + + R Y
Sbjct: 104 GGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYD 163
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
A + E+ V+ I Q LLP
Sbjct: 164 YFA-----------------RTCEKWVDGIRQFKHLPDGNIC-------------RHLLP 193
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
+V+CP LI G+KDP P V+ ++P H +
Sbjct: 194 RVQCPALIVHGEKDPLVPRFHADFI--HKHVKGSRLHLMPEGKHNLHL 239
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 6e-23
Identities = 40/233 (17%), Positives = 73/233 (31%), Gaps = 19/233 (8%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+ VY ++L G G SD + Y+ L + + ++ F +S
Sbjct: 45 PFTDHYSVYLVNLKGCGNSDSAK-----NDSEYSMTETIKDLEAIREALYINKWGFAGHS 99
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG++ L A E +I+ + + + F ++ A
Sbjct: 100 AGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNA----L 155
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE--- 178
+T + R L + + S +EE +E+ L+ L + + +
Sbjct: 156 NDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNY--FRQVEYKDYDV 213
Query: 179 -ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQV 228
+ L VK P I G D P N ++ H P V
Sbjct: 214 RQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNA--TLTKFEESNHNPFV 264
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 2e-22
Identities = 45/231 (19%), Positives = 82/231 (35%), Gaps = 23/231 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ HRV D +G G+SD + + T + +A + D C+ + + F+ +S+
Sbjct: 43 FEEDHRVILFDYVGSGHSDLR---AYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSV 99
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G L+G+ A++ PE+ ++++ S L+ +YG LL
Sbjct: 100 GALIGMLASIRRPELFSHLVMVGPSPCYLN-DPPEYYGGFEEEQLLGLLEMMEKN----- 153
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET--GAADVFLEFICYSGGPLPEEL 180
+ + + D ++ EEL + A E
Sbjct: 154 YIGWATVFAATVLN-QPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHR-------ED 205
Query: 181 LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQVS 229
L +V P LI D P +G+ + + GHCP +S
Sbjct: 206 LSKVTVPSLILQCADDIIAPATVGKYM--HQHLPYSSLKQMEARGHCPHMS 254
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 2e-22
Identities = 40/228 (17%), Positives = 75/228 (32%), Gaps = 19/228 (8%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
++ V +IDL G+G + F+ + L+ S+
Sbjct: 39 FTDNYHVITIDLPGHGEDQSSMDET------WNFDYITTLLDRILDKYKDKSITLFGYSM 92
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG V L A+ +IL + S + + R L+ + + + A +LF
Sbjct: 93 GGRVALYYAINGHIPISNLILESTSPGIKE--EANQLERRLVDDARAKVLDIAGIELFVN 150
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP--EEL 180
+ ++ E+ +I Q L + Y G +P
Sbjct: 151 DWEKLPL--------FQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPR 202
Query: 181 LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
L ++K P LI G+ D +++ + N ++ GH V
Sbjct: 203 LKEIKVPTLILAGEYDEK-FVQIAKKMANLIPNSKCKLISATGHTIHV 249
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 7e-22
Identities = 44/235 (18%), Positives = 76/235 (32%), Gaps = 38/235 (16%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+ ++ +DL G+G S + A + D+A ++ S+
Sbjct: 36 LSSHFTLHLVDLPGFGRSRGFGA--------LSLADMA----EAVLQQAPDKAIWLGWSL 83
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRP--LIRSFQNLLRNTAAG--- 117
GGLV Q A+ PE R ++ + S + W G ++ FQ L +
Sbjct: 84 GGLVASQIALTHPERVRALVTVASSPCFS--ARDEWPGIKPDVLAGFQQQLSDDQQRTVE 141
Query: 118 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET-GAADVFLEFICYSGGPL 176
+ +E+ R + T +L GLE D+
Sbjct: 142 RFLALQTMGTETARQDA-RALKKTVLALPMPEVDVLNGGLEILKTVDL------------ 188
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAY--GNFDSVEDFIVLPNVGHCPQVS 229
+ L V P L +G D P ++ S + + H P +S
Sbjct: 189 -RQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS--ESYIFAKAAHAPFIS 240
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 8e-22
Identities = 38/235 (16%), Positives = 72/235 (30%), Gaps = 36/235 (15%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
L+ ++D G+G SDKP Y +A D+ A
Sbjct: 91 LSDRFTTIAVDQRGHGLSDKP-ETG------YEANDYAD-------DIAGLIRTLARGHA 136
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA 115
+ +S+G + AA P++ R ++ ++ + P+ + + + + A
Sbjct: 137 ILVGHSLGARNSVTAAAKYPDLVRSVVAIDFT---------PYIETEALDALEARVN--A 185
Query: 116 AGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGP 175
+LF + A + D ++ E + + GL A+ +
Sbjct: 186 GSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRS 245
Query: 176 LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
V PVLI G+ D +V+P H
Sbjct: 246 DLVPAYRDVTKPVLIVRGESSKLVSAAALAKTS--RLRPDLPVVVVPGADHYVNE 298
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 2e-21
Identities = 45/237 (18%), Positives = 81/237 (34%), Gaps = 32/237 (13%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+A SHR + DLIG G SDKP+ D Y F+ L+ F + + ++ + +
Sbjct: 54 HVAPSHRCIAPDLIGMGKSDKPD----LD---YFFDDHVRYLDAFIEALGLEEVVLVIHD 106
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNL--LRNTAAGKL 119
G +G A PE +G+ + + P + R ++F+ R +
Sbjct: 107 WGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQN 166
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF---ICYSGG-- 174
+ A + V L TE ++ +P L+ + F + +G
Sbjct: 167 AFIEGALPKCVVRPL----------TEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPA 216
Query: 175 ------PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG-NFDSVEDFIVLPNVGH 224
L Q P L+ WG P + + + + + H
Sbjct: 217 NIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCK-TVDIGPGLH 272
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 3e-21
Identities = 37/238 (15%), Positives = 71/238 (29%), Gaps = 31/238 (13%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICN 60
A R+ + DLIG G SDK +P Y + L+ + + + D+ + +
Sbjct: 51 HCAGLGRLIACDLIGMGDSDKLDPSGPER---YAYAEHRDYLDALWEALDLGDRVVLVVH 107
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK-- 118
G +G A E +G+ + + P R L ++F++ +
Sbjct: 108 DWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDN 167
Query: 119 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP- 177
+F + V +R + + E L G + I +G P
Sbjct: 168 VFVEQVLPGLILRPL-------SEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADV 220
Query: 178 -------EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF----IVLPNVGH 224
L + P L + + R + + + H
Sbjct: 221 VAIARDYAGWLSESPIPKLFINAEPGALTTGRM-RDF-----CRTWPNQTEITVAGAH 272
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 8e-21
Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 21/208 (10%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICN 60
L R+ + DLIG G SDK +P Y++ L + + D + +
Sbjct: 50 HLEGLGRLVACDLIGMGASDKLSPSGPDR---YSYGEQRDFLFALWDALDLGDHVVLVLH 106
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK-- 118
G +G A + +G+ + + + P R + + F++ A +
Sbjct: 107 DWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALEHN 166
Query: 119 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGG---- 174
+F + V +R + + + + G + + + G
Sbjct: 167 IFVERVLPGAILRQL-------SDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEV 219
Query: 175 ----PLPEELLPQVKCPVLIAWGDKDPW 198
L + P L +
Sbjct: 220 VALVNEYRSWLEETDMPKLFINAEPGAI 247
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 2e-20
Identities = 32/239 (13%), Positives = 62/239 (25%), Gaps = 58/239 (24%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFI 58
+ + +DL G+G S P T + + +F + I
Sbjct: 38 YLEDYNCILLDLKGHGESKGQCP--------STVYGYIDNVANFITNSEVTKHQKNITLI 89
Query: 59 CNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQ-------PWYGRPLIRSFQNLL 111
S+GG + L A+ + R ++ L+ R + K + +
Sbjct: 90 GYSMGGAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGI 149
Query: 112 RNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICY 171
N + K F + + + N L C D+
Sbjct: 150 DNPLSEKYFETLEKDPDIMINDLIACKL----------------------IDLV------ 181
Query: 172 SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF--DSVEDFIVLPNVGHCPQV 228
+ L + PV + +E +S + + H V
Sbjct: 182 -------DNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENS--ELKIFETGKHFLLV 231
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 3e-20
Identities = 38/227 (16%), Positives = 60/227 (26%), Gaps = 26/227 (11%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA V D G G S P Y E L D AF S
Sbjct: 46 LAPHFTVICYDRRGRGDSGDTPP--------YAVEREIEDLAAII-DAAGGAAFVFGMSS 96
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G + L AA I R + P + + + R A F
Sbjct: 97 GAGLSLLAAASGLPITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMT 156
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ ++ + + PG+E A + + +P
Sbjct: 157 EGV-------------GVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFA 203
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQ 227
+ P L+ G P + D++ + ++ L N H
Sbjct: 204 SISIPTLVMDGGASPAWIRHTAQELA--DTIPNARYVTLENQTHTVA 248
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 1e-19
Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 29/234 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L K V D +G G SD F K + + E +A + + + I +S+
Sbjct: 51 LEKQFTVIVFDYVGSGQSDLE---SFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHSV 107
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG-KLFY 121
++ A+ + + ++ S + + G + L+ +
Sbjct: 108 SSIIAGIASTHVGDRISDITMICPSPCFM-NFPPDYVGGFERDDLEELINLMDKNYIGWA 166
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE--- 178
+A L + +S++ EL A
Sbjct: 167 NYLAP-------LVMGASHSSELIGELSGSFCTTDPI-VAKTFAKATF--------FSDY 210
Query: 179 -ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQVS 229
LL + P LI KD E+G+ +++ + ++ GHC ++
Sbjct: 211 RSLLEDISTPALIFQSAKDSLASPEVGQYM--AENIPNSQLELIQAEGHCLHMT 262
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 85.0 bits (210), Expect = 1e-19
Identities = 35/226 (15%), Positives = 66/226 (29%), Gaps = 19/226 (8%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L S + +ID GYS ++ W + + + +SI
Sbjct: 66 LPDSIGILTIDAPNSGYSPVS------NQANVGLRDWVNAILMIFEHFKFQSYLLCVHSI 119
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG LQ + C G I L + M++ P + + L+ A + K
Sbjct: 120 GGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLK 179
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
++ S Q + +L + P + A +F +
Sbjct: 180 DLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDF----------KTGI 229
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
K P ++ E +E + + ++L H
Sbjct: 230 SEKIPSIVFSESFREKEYLESEYLNKHTQTK---LILCGQHHYLHW 272
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 1e-18
Identities = 31/231 (13%), Positives = 67/231 (29%), Gaps = 30/231 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L RV + G+G S P + ++ + + + + +S
Sbjct: 50 LDADFRVIVPNWRGHGLSPSEVPD-------FGYQEQVKDALEILDQLGVETFLPVSHSH 102
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG V ++ PE I+++ + P + + L LF
Sbjct: 103 GGWVLVELLEQAGPERAPRGIIMDWLMWAPK----PDFAKSLTLLKDPERWREGTHGLFD 158
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET--GAADVFLEFICYSGGPLPEE 179
+ + R V L+E++ G + + V + +G P+
Sbjct: 159 VWLDGHDEKR------------VRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMM 206
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
P+ + E ++ + + + L H P +
Sbjct: 207 ANLTKTRPIRHIFSQPTEPEYEKINSDFA--EQHPWFSYAKLGGPTHFPAI 255
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 80.6 bits (199), Expect = 6e-18
Identities = 38/232 (16%), Positives = 68/232 (29%), Gaps = 25/232 (10%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
RV + D G+G SDKP + YTFE + L + + + G
Sbjct: 72 ESGARVIAPDFFGFGKSDKPVDEED-----YTFEFHRNFLLALIERLDLRNITLVVQDWG 126
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM 123
G +GL + +P + +I++N L +F + A G +K
Sbjct: 127 GFLGLTLPMADPSRFKRLIIMNAXL---------MTDPVTQPAFSAFVTQPADGFTAWKY 177
Query: 124 VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF----------ICYSG 173
+ S + +TE P +T +F
Sbjct: 178 DLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDIS 237
Query: 174 GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGH 224
+A G KD ++ + + + + + GH
Sbjct: 238 TEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGH 289
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 1e-17
Identities = 40/245 (16%), Positives = 77/245 (31%), Gaps = 37/245 (15%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
V+A +R + DLIG G S KP + Y + + ++ F + D + +
Sbjct: 52 VVAAGYRAVAPDLIGMGDSAKP-DIE------YRLQDHVAYMDGFIDALGLDDMVLVIHD 104
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISL----RMLHIKKQPWYGRPLIRSFQNLL---RNT 114
G ++G++ A + P+ + + + M + PL R + +
Sbjct: 105 WGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMV 164
Query: 115 AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF---ICY 171
G F + + V L +E + P + L++ +
Sbjct: 165 LDGNFFVETILPEMGVVRSL----------SEAEMAAYRAPFPTRQSRLPTLQWPREVPI 214
Query: 172 SGGPL--------PEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNV 222
G P E L P L+ + P + N ++E +
Sbjct: 215 GGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNLE-VRFVGAG 273
Query: 223 GHCPQ 227
H Q
Sbjct: 274 THFLQ 278
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 4e-17
Identities = 43/223 (19%), Positives = 72/223 (32%), Gaps = 17/223 (7%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
A RV + DL G+G SDKP YTF L F + ++ +C G
Sbjct: 71 AAGGRVVAPDLFGFGRSDKPTDDA-----VYTFGFHRRSLLAFLDALQLERVTLVCQDWG 125
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM 123
G++GL V P++ +I++N L + P G R F + GKL +
Sbjct: 126 GILGLTLPVDRPQLVDRLIVMNT---ALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRA 182
Query: 124 VAT-SESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ +++ + + P
Sbjct: 183 IPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGR-------QAMSFWST 235
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGH 224
Q P +A G +DP E+ + +++ GH
Sbjct: 236 QWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGH 278
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 7e-17
Identities = 35/240 (14%), Positives = 59/240 (24%), Gaps = 27/240 (11%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+++ + DLIG+G S KP Y F L+ F + A+ +
Sbjct: 51 LVSPVAHCIAPDLIGFGQSGKP-DIA------YRFFDHVRYLDAFIEQRGVTSAYLVAQD 103
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRML-------HIKKQPWYGRPLIRSFQNLLRNT 114
G + A P+ RG+ + M + R+ R
Sbjct: 104 WGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTP 163
Query: 115 AAGKLFYKMVATSESVRNILCQCYND--TSQVTEELVEKILQPGLETGAADVFLEFIC-- 170
G+ + + V +L + P E
Sbjct: 164 GEGEAMI--LEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAG 221
Query: 171 -----YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGH 224
Y L P L+ G+ E + + I L H
Sbjct: 222 EPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRCA-LIRLGAGLH 280
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 4e-16
Identities = 34/227 (14%), Positives = 69/227 (30%), Gaps = 28/227 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L H + +D+ +G S + + A L D + D+A FI +S+
Sbjct: 39 LVNDHNIIQVDVRNHGLSPREPV--------MNYPAMAQDLVDTLDALQIDKATFIGHSM 90
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG + + P+ ++ ++I+ H+++ + ++ + +
Sbjct: 91 GGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMR 150
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
E V L + + D + P L + + E +P
Sbjct: 151 QHLNEEGVIQFLLKSFVDGEW-------RFNVPVLWDQYPHI-----------VGWEKIP 192
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGN-FDSVEDFIVLPNVGHCPQV 228
P L G P+ + F V+ GH
Sbjct: 193 AWDHPALFIPGGNSPYVSEQYRDDLLAQFPQAR-AHVIAGAGHWVHA 238
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 6e-16
Identities = 35/228 (15%), Positives = 79/228 (34%), Gaps = 23/228 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA +R + D G G ++ +T +T + + + A + S+
Sbjct: 68 LAAGYRCITFDNRGIGATENAEG--------FTTQTMVADTAALIETLDIAPARVVGVSM 119
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G + + V+ PE+ +L+ R+ + + ++ + + + ++ +
Sbjct: 120 GAFIAQELMVVAPELVSSAVLMATRGRLD--RARQFFNKAEAELYDSGVQLPPTYDARAR 177
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ + N + ND V + + + P T L+
Sbjct: 178 L------LENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCA---PQTNRLPAYR 228
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
+ PVL+ D P LGR D++ + ++ +P+ GH
Sbjct: 229 NIAAPVLVIGFADDVVTPPYLGREVA--DALPNGRYLQIPDAGHLGFF 274
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 8e-16
Identities = 33/232 (14%), Positives = 68/232 (29%), Gaps = 23/232 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +RV + D G+G S +P Y ++T+ S L+ + + + S+
Sbjct: 51 VEAGYRVITYDRRGFGKSSQPWEG-------YEYDTFTSDLHQLLEQLELQNVTLVGFSM 103
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG + + + ++ L+ + G + +
Sbjct: 104 GGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVIND---- 159
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET---GAADVFLEFICYSGGPLPE 178
+A + + T V+E G D F
Sbjct: 160 -RLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAF----SKTDFR 214
Query: 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
+ L + P LI GD D P E + +++ + ++ H
Sbjct: 215 KDLEKFNIPTLIIHGDSDATVPFEYSGKLTH-EAIPNSKVALIKGGPHGLNA 265
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-15
Identities = 40/233 (17%), Positives = 72/233 (30%), Gaps = 25/233 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
A+ +RV + D G+G S +P +T+A L + + A S
Sbjct: 43 AAQGYRVIAHDRRGHGRSSQP------WSG-NDMDTYADDLAQLIEHLDLRDAVLFGFST 95
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL-F 120
GG + L++ ++ + G P + F + + + A +
Sbjct: 96 GGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLP-MEVFDGIRQASLADRSQL 154
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET---GAADVFLEFICYSGGPLP 177
YK +A ++ + +V+ G+ A D F
Sbjct: 155 YKDLA-----SGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAF----SETDF 205
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
E L ++ P L+ GD D PIE V+ + H
Sbjct: 206 TEDLKKIDVPTLVVHGDADQVVPIEASGIASA-ALVKGSTLKIYSGAPHGLTD 257
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-15
Identities = 37/239 (15%), Positives = 84/239 (35%), Gaps = 30/239 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
A+ +RV + DL G+G S Y+ T+ +Q++ +++ + +S+
Sbjct: 50 AAQGYRVVAPDLFGHGRSSHLEMVTS-----YSSLTFLAQIDRVIQELPDQPLLLVGHSM 104
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G ++ A + P+ + +IL+ + L + + + + L +T +F
Sbjct: 105 GAMLATAIASVRPKKIKELILVELPLPAEE--SKKESAVNQLTTCLDYLSSTPQHPIFPD 162
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF-------------I 169
+ + +R + ++EE + Q + V +
Sbjct: 163 VATAASRLRQAI-------PSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNN 215
Query: 170 CYSGGPLPEELLPQVKCPVLIAWGDKDP-WEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
G E+L ++ P + +GD P +L + + V + GH
Sbjct: 216 LPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQAK--RVFLSGGHNLH 272
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 7e-15
Identities = 26/205 (12%), Positives = 56/205 (27%), Gaps = 22/205 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNS 61
+ R DLIG G S K Y L + + + + + F+ +
Sbjct: 66 IEPVARCIIPDLIGMGKSGKSGNGS------YRLLDHYKYLTAWFELLNLPKKIIFVGHD 119
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN-------LLRNT 114
G + A + + ++ + + ++ + I ++ L N
Sbjct: 120 WGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKMVLENNF 179
Query: 115 AAGKLFYKMVAT--SESVRNILCQCYNDTSQVTEELVEKILQ-PGLETGAADVFLEFICY 171
+ + + + + +V + + P ++ G DV Y
Sbjct: 180 FVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNY 239
Query: 172 SGGPLPEELLPQVKCPVLIAWGDKD 196
L P L D
Sbjct: 240 -----NAYLRASDDLPKLFIESDPG 259
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 71.7 bits (175), Expect = 7e-15
Identities = 29/234 (12%), Positives = 71/234 (30%), Gaps = 31/234 (13%)
Query: 1 MVLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICN 60
+ ++ +D G P + + + + A + + + +
Sbjct: 62 QEIIQNFVRVHVDAPGMEEGAPVFPLGY---QYPSLDQLADMIPCILQYLNFSTIIGVGV 118
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
G + + A+ P+ G++L+NI + W
Sbjct: 119 GAGAYILSRYALNHPDTVEGLVLINIDPNA-----KGWMDW-----------------AA 156
Query: 121 YKMVATSESVRNILCQCY--NDTSQVTEELVEKILQPGLETGAADVFLEFI----CYSGG 174
+K+ + S+ +++ + EL++K + +
Sbjct: 157 HKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDL 216
Query: 175 PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
+KCPV++ GD+ P E + + F+ + + G PQ+
Sbjct: 217 NFERGGETTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQL 270
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 9e-15
Identities = 42/229 (18%), Positives = 74/229 (32%), Gaps = 26/229 (11%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNS 61
L + ++V D G G + D Y+ A++L+ + + ++
Sbjct: 38 LEQEYQVVCYDQRGTGNNPDTLAED------YSIAQMAAELHQAL-VAAGIEHYAVVGHA 90
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+G LVG+Q A+ P +I +N LR+ R FQ R +G
Sbjct: 91 LGALVGMQLALDYPASVTVLISVNGWLRI---------NAHTRRCFQVRERLLYSG---- 137
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
A E+ L + + L + + L +
Sbjct: 138 GAQAWVEAQPLFLYP-ADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHA 196
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
+++CPV I D P ++ D +V+P GH V
Sbjct: 197 DRIRCPVQIICASDDLLVPTACSSEL--HAALPDSQKMVMPYGGHACNV 243
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 2e-14
Identities = 40/239 (16%), Positives = 79/239 (33%), Gaps = 35/239 (14%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ +RV + D G+G S K N Y ++T+A+ L+ + + + S+
Sbjct: 47 LAQGYRVITYDRRGFGGSSKVNTG-------YDYDTFAADLHTVLETLDLRDVVLVGFSM 99
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL-F 120
G + A E + L L + G P F + + +
Sbjct: 100 GTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVP-QEVFDGIEAAAKGDRFAW 158
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG------AADVFLEFICYSGG 174
+ +N N S+++E+ V + + ++E
Sbjct: 159 FTDFY-----KNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIE------- 206
Query: 175 PLPEEL--LPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVED--FIVLPNVGHCPQV 228
++ + P LI G KD PI+ R + +V + ++ + H
Sbjct: 207 DFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFH--QAVPEADYVEVEGAPHGLLW 263
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-14
Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 29/234 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
++ +R + D G+G SD+P ++T+A + + + + + S+
Sbjct: 43 SSRGYRTIAFDRRGFGRSDQPWTG-------NDYDTFADDIAQLIEHLDLKEVTLVGFSM 95
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG + A G++LL + K G P + F +
Sbjct: 96 GGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVP-LDVFARFKTELLKDR--- 151
Query: 122 KMVATSESVRNILCQCY--NDTSQVTEELVEKILQPGLET---GAADVFLEFICYSGGPL 176
++ + + Y N V++ + + LQ L D F
Sbjct: 152 -----AQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAF----AETD 202
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
+ ++ P L+ GD D P E + ++ V + H V
Sbjct: 203 FRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAA-ELIKGAELKVYKDAPHGFAV 255
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 70.2 bits (171), Expect = 4e-14
Identities = 30/242 (12%), Positives = 61/242 (25%), Gaps = 25/242 (10%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICN------ 60
+V ID + +G S N + + A + +
Sbjct: 87 DKVLLIDQVNHGDSAVRNRGRL--GTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGH 144
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
S+GG L V++P + +IL+ + G P +
Sbjct: 145 SMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKT 204
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL------ETGAADVFL------EF 168
A + + + ++++ I+ + V
Sbjct: 205 CDHFANESEYVKYMRN-GSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNL 263
Query: 169 ICYSGG----PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGH 224
+CY P + V+ + G + W P + V+P H
Sbjct: 264 LCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSH 323
Query: 225 CP 226
Sbjct: 324 LV 325
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 4e-14
Identities = 45/234 (19%), Positives = 75/234 (32%), Gaps = 28/234 (11%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +R + D G+G+S Y F+T+A LND D+ + +S+
Sbjct: 43 VDAGYRGIAHDRRGHGHSTPVWDG-------YDFDTFADDLNDLLTDLDLRDVTLVAHSM 95
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL-F 120
GG + R +LL+ ++ + G P F L + F
Sbjct: 96 GGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVP-DEVFDALKNGVLTERSQF 154
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET---GAADVFLEFICYSGGPLP 177
+K A N ++VT+ + + G F G
Sbjct: 155 WKDTAEGFFSAN------RPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAF----GYTDF 204
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVED--FIVLPNVGHCPQV 228
E L + P L+ GD D PI+ GR + + V H +
Sbjct: 205 TEDLKKFDIPTLVVHGDDDQVVPIDATGRKSA--QIIPNAELKVYEGSSHGIAM 256
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-13
Identities = 42/232 (18%), Positives = 72/232 (31%), Gaps = 23/232 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L +RV + D G+G S +P Y ++T+A+ LN + + A + S
Sbjct: 47 LDAGYRVITYDRRGFGQSSQP-TTG------YDYDTFAADLNTVLETLDLQDAVLVGFST 99
Query: 63 GG-LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL-F 120
G V + + L L G F ++ A + F
Sbjct: 100 GTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAF 159
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG---AADVFLEFICYSGGPLP 177
Y + N ++++EE V G AA +
Sbjct: 160 YTGFFNDFYNLD-----ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-----YTDF 209
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQV 228
+P++ P LI G D PIE R + +++ + H
Sbjct: 210 RADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLW 261
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 2e-13
Identities = 45/235 (19%), Positives = 81/235 (34%), Gaps = 29/235 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+ +RV + D G+G SD+P + +T+A+ + + + A I +S
Sbjct: 45 LSHGYRVIAHDRRGHGRSDQP-STG------HDMDTYAADVAALTEALDLRGAVHIGHST 97
Query: 63 GG-LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA-GKLF 120
GG V A EP +L++ ++ G P + F AA F
Sbjct: 98 GGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLP-LEVFDEFRAALAANRAQF 156
Query: 121 YKMVATSESVRNILCQCYN-DTSQVTEELVEKILQPGLETGA---ADVFLEFICYSGGPL 176
Y V + +N + + V++ L++ G+ A + F
Sbjct: 157 YIDVPSGPFYG------FNREGATVSQGLIDHWWLQGMMGAANAHYECIAAF----SETD 206
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIE-LGR--AYGNFDSVEDFIVLPNVGHCPQV 228
+ L ++ PVL+A G D P A ++ + H
Sbjct: 207 FTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANAT--LKSYEGLPHGMLS 259
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 2e-13
Identities = 42/234 (17%), Positives = 73/234 (31%), Gaps = 27/234 (11%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L +RV + D G+G S +P Y ++T+A+ LN + + A + S+
Sbjct: 48 LDAGYRVITYDRRGFGQSSQP-TTG------YDYDTFAADLNTVLETLDLQDAVLVGFSM 100
Query: 63 GG-LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA-GKLF 120
G V + + L L G F ++ A F
Sbjct: 101 GTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAF 160
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG---AADVFLEFICYSGGPLP 177
Y + N ++++EE V G AA +
Sbjct: 161 YTGFFNDFYNLD-----ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-----YTDF 210
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVED--FIVLPNVGHCPQV 228
+P++ P LI G D PIE R + ++ ++ + H
Sbjct: 211 RADIPRIDVPALILHGTGDRTLPIENTARVFH--KALPSAEYVEVEGAPHGLLW 262
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 4e-13
Identities = 39/240 (16%), Positives = 71/240 (29%), Gaps = 36/240 (15%)
Query: 3 LAKSHRVYSIDLIGYGYSDKP-NPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
LA RV ++ G G SD +P Y + L ++ I S
Sbjct: 52 LAGDWRVLCPEMRGRGDSDYAKDPMT------YQPMQYLQDLEALLAQEGIERFVAIGTS 105
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GGL+ + A P +L ++ + G IR + RN
Sbjct: 106 LGGLLTMLLAAANPARIAAAVLNDVGPEV------SPEGLERIRGYVGQGRNFETW---- 155
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL---------EFICYS 172
+ R + + + + + G++ F
Sbjct: 156 -----MHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPV 210
Query: 173 GGPLPEELLPQ----VKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
G ++ P P+L+ G+ + + VE + LP +GH P +
Sbjct: 211 GATPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMASRPGVE-LVTLPRIGHAPTL 269
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 8e-13
Identities = 45/233 (19%), Positives = 82/233 (35%), Gaps = 19/233 (8%)
Query: 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGL 65
V D +G G S F+T + + + + C + ++ + S GG+
Sbjct: 82 GRTVIHYDQVGCGNSTHLPDAP---ADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGM 138
Query: 66 VGLQAAVMEPEICRGMILLNISLRM-LHIKKQPWYGRPLIRSFQNLLRNTAAGKLF---Y 121
+G + AV +P + + N M L + L + L A
Sbjct: 139 LGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAALDRHEAAGTITHPD 198
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE--- 178
+ A +E R +C+ + + + +P + + EF G L +
Sbjct: 199 YLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVY-HTMNGPNEFHV--VGTLGDWSV 255
Query: 179 -ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
+ LP V PVL+ G+ D P + + + D + D V P HC +
Sbjct: 256 IDRLPDVTAPVLVIAGEHDEATP-KTWQPF--VDHIPDVRSHVFPGTSHCTHL 305
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 9e-13
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 6/129 (4%)
Query: 3 LAKS-HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+K + VY+ D G+G S + A + D+ K ++ + S
Sbjct: 52 YSKIGYNVYAPDYPGFGRSASSEKYGI---DRGDLKHAAEFIRDYLKANGVARSVIMGAS 108
Query: 62 IGGLVGLQAAVMEPEICRGMILLN--ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
+GG + + + P+I G+I + + K+ L+ ++ + A K
Sbjct: 109 MGGGMVIMTTLQYPDIVDGIIAVAPAWVESLKGDMKKIRQKTLLVWGSKDHVVPIALSKE 168
Query: 120 FYKMVATSE 128
+ +++ S
Sbjct: 169 YASIISGSR 177
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-12
Identities = 39/233 (16%), Positives = 70/233 (30%), Gaps = 25/233 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA +RV + D G+G S + + + +A + + A + +S
Sbjct: 46 LAHGYRVVAHDRRGHGRSSQVWDG-------HDMDHYADDVAAVVAHLGIQGAVHVGHST 98
Query: 63 GGLVGLQAAVMEPEI-CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA-GKLF 120
GG ++ PE +L+ ++ G P F A+ F
Sbjct: 99 GGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLP-KSVFDGFQAQVASNRAQF 157
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET---GAADVFLEFICYSGGPLP 177
Y+ V + +E ++ + G+ D + F S
Sbjct: 158 YRDVPAGPFYGYN-----RPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAF---SQTDF- 208
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
E L ++ PVL+ GD D P E + + H
Sbjct: 209 TEDLKGIQQPVLVMHGDDDQIVPYENSGVLSA-KLLPNGALKTYKGYPHGMPT 260
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 2e-12
Identities = 35/256 (13%), Positives = 62/256 (24%), Gaps = 53/256 (20%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
V D G S + Y F + D V D+A
Sbjct: 48 ADGGLHVIRYDHRDTGRSTTRDF----AAHPYGFG-------ELAADAVAVLDGWGVDRA 96
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA 115
+ S+G + A+ + + +L + R +
Sbjct: 97 HVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDF--DANIERVMRGEPTLDGLPGP 154
Query: 116 AGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ------PGLETGAADVFLEFI 169
+ ++ + + V K P + A I
Sbjct: 155 QQPFLDALALMNQPAE--------GRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAI 206
Query: 170 CYSGGPLPE---------------ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE 214
++GG L E L +V P L+ + DP P G+ +
Sbjct: 207 DHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLA--GLIP 264
Query: 215 D--FIVLPNVGHCPQV 228
+P +GH
Sbjct: 265 TARLAEIPGMGHALPS 280
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 3e-12
Identities = 14/98 (14%), Positives = 24/98 (24%), Gaps = 5/98 (5%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+ +R +IDL G G+S + S L + I S
Sbjct: 57 LAQAGYRAVAIDLPGLGHSKEAA-----APAPIGELAPGSFLAAVVDALELGPPVVISPS 111
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWY 99
+ G+ L G + +
Sbjct: 112 LSGMYSLPFLTAPGSQLPGFVPVAPICTDKINAANYAS 149
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 5e-12
Identities = 23/231 (9%), Positives = 71/231 (30%), Gaps = 28/231 (12%)
Query: 2 VLAK--SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFIC 59
+ ++DL G+G+S + Y+ + + L +++ F +
Sbjct: 99 TVIVGLGEPALAVDLPGHGHSAWREDGN------YSPQLNSETLAPVLRELAPGAEFVVG 152
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
S+GGL ++ A M P++ ++L++++ P + A
Sbjct: 153 MSLGGLTAIRLAAMAPDLVGELVLVDVT---------PSALQRHAELTAEQRGTVALMHG 203
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVF-----LEFICYSGG 174
+ + +++ ++ + + + + +
Sbjct: 204 EREF-PSFQAMLDLTIA---AAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFA 259
Query: 175 PLPEELLPQVKCPVLIAWGDKDPW-EPIELGRAYGNFDSVEDFIVLPNVGH 224
L ++ + + P+ + G + + + ++ GH
Sbjct: 260 GLWDD-VDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGH 309
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 6e-12
Identities = 41/228 (17%), Positives = 77/228 (33%), Gaps = 19/228 (8%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ---AFFICNSIG 63
R+ ++DL +G + NP D + ET A + + + + D I +S+G
Sbjct: 67 CRIVALDLRSHGETKVKNPED------LSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMG 120
Query: 64 GLVGLQAAVME-PEICRGMILLNIS--LRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
G + + A G+ ++++ M + + R ++F++ L N +
Sbjct: 121 GAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKS-LENAIEWSVK 179
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEEL 180
+ ES R + +T K P ++ L
Sbjct: 180 SGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLF 239
Query: 181 LPQVKCPVLIAWGDKDPWE-PIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
L P L+ D + + +G+ G F VLP GH
Sbjct: 240 L-SCPIPKLLLLAGVDRLDKDLTIGQMQGKF----QMQVLPQCGHAVH 282
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 9e-12
Identities = 45/228 (19%), Positives = 70/228 (30%), Gaps = 29/228 (12%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L + RV D G+G S P YT + + + +A F+ S+
Sbjct: 50 LTRHFRVLRYDARGHGASSVPPGP-------YTLARLGEDVLELLDALEVRRAHFLGLSL 102
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG+VG A+ P+ ++L N S + W R + TAAG L
Sbjct: 103 GGIVGQWLALHAPQRIERLVLANTSAWLGP--AAQWDERIAAVLQAEDMSETAAGFL-GN 159
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ R E +VE+ + T L
Sbjct: 160 WFPPALLERA-------------EPVVERFRAMLMAT-NRHGLAGSFAAVRDTDLRAQLA 205
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED--FIVLPNVGHCPQV 228
+++ P L+ G D G S+ + LP H V
Sbjct: 206 RIERPTLVIAGAYDTVTAASHGELIA--ASIAGARLVTLPA-VHLSNV 250
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 1e-11
Identities = 31/231 (13%), Positives = 57/231 (24%), Gaps = 39/231 (16%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ V D G+ D + +T A L F + S
Sbjct: 44 LARDFHVICPDWRGHDAKQTD-SGD------FDSQTLAQDLLAFIDAKGIRDFQMVSTSH 96
Query: 63 GGLVGLQ-AAVMEPEICRGMILLNISL----RMLHIKKQPWYGRPLIRSFQNLLRNTAAG 117
G V + + I+++ L + + + Q+ A
Sbjct: 97 GCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQSFFDEWAET 156
Query: 118 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICY--SGGP 175
++ ++ Q A+ Y G P
Sbjct: 157 TDNADVLNHLR--------------NEMPWFHGEMWQRACREIEAN-------YRTWGSP 195
Query: 176 LPE-ELLPQVKCPVLIAWGDKDPWEPI-ELGRAYGNFDSVEDFIVLPNVGH 224
L + LPQ P + + + +L + S +P H
Sbjct: 196 LDRMDSLPQK--PEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTH 244
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 2e-11
Identities = 47/259 (18%), Positives = 89/259 (34%), Gaps = 49/259 (18%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+RV ++D+ GYG S P + Y E ++ F + QA FI + G
Sbjct: 283 QAGYRVLAMDMKGYGESSAPPEIE-----EYCMEVLCKEMVTFLDKLGLSQAVFIGHDWG 337
Query: 64 GLVGLQAAVMEPEICRGMILLNI----------SLRMLHIKKQPWY-------GRP---- 102
G++ A+ PE R + LN L + Y G
Sbjct: 338 GMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAEL 397
Query: 103 ---LIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEE----LVEKILQP 155
L R+F++L R + L V + + + + + VTEE V++ +
Sbjct: 398 EQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS 457
Query: 156 GLETG-----AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF 210
G + ++ + L ++ P L+ +KD ++ + ++
Sbjct: 458 GFRGPLNWYRNMERNWKW-------ACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDW 510
Query: 211 DSVEDF--IVLPNVGHCPQ 227
+ + + GH Q
Sbjct: 511 --IPHLKRGHIEDCGHWTQ 527
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 6e-11
Identities = 28/232 (12%), Positives = 60/232 (25%), Gaps = 25/232 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ RV D G G S P+D +T + + + ++ + +
Sbjct: 49 YLEGFRVVYFDQRGSGRSL-ELPQDPRL---FTVDALVEDTLLLAEALGVERFGLLAHGF 104
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLR-----MLHIKKQPWYGRPLIRSFQNLLRNTAAG 117
G +V L+ P+ ++L L + + L+
Sbjct: 105 GAVVALEVLRRFPQAEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKREEPK 164
Query: 118 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP 177
LF +++ + R + + +
Sbjct: 165 ALFDRLMFPTPRGRMAYEWLAEGAGILGSD-------APGLAFLRNGLWRLDYT------ 211
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
L + P+ + G++D + VLP GH +
Sbjct: 212 -PYLTPERRPLYVLVGERDGTSYPYAEEVASRLRA--PIRVLPEAGHYLWID 260
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 2e-10
Identities = 35/254 (13%), Positives = 73/254 (28%), Gaps = 62/254 (24%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
LA+ + V DL G+G S+KP+ D Y+ + A D ++A
Sbjct: 52 LAEHYDVIVPDLRGFGDSEKPDLNDLSK---YSLDKAA-------DDQAALLDALGIEKA 101
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA 115
+ + + +V + + + + P+
Sbjct: 102 YVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDF---------GPVYFGLG------H 146
Query: 116 AGKLFY-----------KMVATSESVRNILCQCYND--------TSQVTEELVEKILQPG 156
+ +Y + ++ E + ++ T + E V+ ++P
Sbjct: 147 VHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPD 206
Query: 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPW----EPIELGRAYGNFDS 212
G + + I + PV + WG D IE Y
Sbjct: 207 NIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKY----- 261
Query: 213 VEDF--IVLPNVGH 224
++ + + GH
Sbjct: 262 YSNYTMETIEDCGH 275
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-09
Identities = 40/244 (16%), Positives = 73/244 (29%), Gaps = 45/244 (18%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
LAK V + DL G G S+ P Y+ E A + K D+
Sbjct: 53 LAKRFTVIAPDLPGLGQSEPP-KTG------YSGEQVA-------VYLHKLARQFSPDRP 98
Query: 56 FFIC-NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT 114
F + + IG V ++ + + I + P + +
Sbjct: 99 FDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFA 158
Query: 115 AAGKLFYKMVATSES--VRNILCQCYNDTSQVTEELVEK----ILQPGLETG------AA 162
A +L ++A E + + + ++T +E L++ +P A
Sbjct: 159 ADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRAL 218
Query: 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDF--IVLP 220
+ + E +++ P + G + ED VLP
Sbjct: 219 NESVR-------QNAELAKTRLQMPTMTLAGGGAGGMGTFQLEQMKAY--AEDVEGHVLP 269
Query: 221 NVGH 224
GH
Sbjct: 270 GCGH 273
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 46/269 (17%), Positives = 81/269 (30%), Gaps = 65/269 (24%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---------KDQAFF 57
+R + DL GYG + D ++ DVV +++ F
Sbjct: 59 YRAVAPDLRGYGDTTGAPLNDPSK---FSILH-------LVGDVVALLEAIAPNEEKVFV 108
Query: 58 ICNSIGGLVGLQAAVMEPEICRGMILLNI-------SLRMLHIKKQPWYGRPLIRSFQN- 109
+ + G L+ + P+ + ++ L++ + ++ K + I FQ
Sbjct: 109 VAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVP 168
Query: 110 ------LLRNTAAG--KLFY-------KMVATSESVRNILCQCYNDTSQVTEE----LVE 150
A K + + I +S ++EE
Sbjct: 169 GEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYAN 228
Query: 151 KILQPGLETGAADVFLEFICYSGGPLPEELL-----PQVKCPVLIAWGDKDPWEPIELGR 205
K Q G TGA + + Y P+ EL QVK P G+ D I +
Sbjct: 229 KFEQTGF-TGA----VNY--YRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAK 281
Query: 206 AYGNFDSVEDFI-------VLPNVGHCPQ 227
Y + + + VL H
Sbjct: 282 EYIHNGGFKKDVPLLEEVVVLEGAAHFVS 310
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 4e-09
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+K RV D G+G+S+ P YT E + + +A F S+
Sbjct: 49 LSKHFRVLRYDTRGHGHSEAPKGP-------YTIEQLTGDVLGLMDTLKIARANFCGLSM 101
Query: 63 GGLVGLQAAVMEPEICRGMILLN 85
GGL G+ A + + L N
Sbjct: 102 GGLTGVALAARHADRIERVALCN 124
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 3e-08
Identities = 36/239 (15%), Positives = 80/239 (33%), Gaps = 28/239 (11%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFIC-NS 61
+ V D G G S++P D+ +T + + + ++ F+ +S
Sbjct: 52 TKEGITVLFYDQFGCGRSEEP------DQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSS 105
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISL-RMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
GG + L AV + +G+I+ L +K+ L +++ ++ K
Sbjct: 106 YGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIK-----KYG 160
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYS----GGPL 176
+ + + Y+ +E+ ++L+ +V+ + G +
Sbjct: 161 SSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTI 220
Query: 177 PEEL----LPQVKCPVLIAWGDKD---PWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
+ + +K P LI G+ D P + S + V + H
Sbjct: 221 KDWDITDKISAIKIPTLITVGEYDEVTPNVARVIHEKIAG--S--ELHVFRDCSHLTMW 275
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 3e-08
Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 7/116 (6%)
Query: 7 HRVYSIDLIGYGYSDKP-NPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGL 65
+RV +ID GYG S K + Y + + +QAF + + G
Sbjct: 55 YRVVAIDQRGYGRSSKYRVQKA------YRIKELVGDVVGVLDSYGAEQAFVVGHDWGAP 108
Query: 66 VGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
V A + P+ C G++ +++ + P R L G+++Y
Sbjct: 109 VAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWY 164
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 4e-08
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 16/91 (17%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
LA+ +V DL GYG+SD P + YT A K +++
Sbjct: 56 LAERFKVIVADLPGYGWSDMPESDE--QHTPYTKRAMA-------KQLIEAMEQLGHVHF 106
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNI 86
++ G V + A+ P + +L+I
Sbjct: 107 ALAGHNRGARVSYRLALDSPGRLSKLAVLDI 137
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 2e-07
Identities = 29/222 (13%), Positives = 61/222 (27%), Gaps = 48/222 (21%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGG 64
++ G+G P + + W + + + + ++ S+GG
Sbjct: 45 TCHAPIYKGHGVP----PEELVH---TGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGG 97
Query: 65 LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV 124
+ L+ P G++ + ++IK + ++ + + K
Sbjct: 98 VFSLKLGYTVP--IEGIVTMCA---PMYIKSEETMYEGVLEYARE----------YKKRE 142
Query: 125 ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQV 184
SE + + T T L L+ ADV + L +
Sbjct: 143 GKSEEQIEQEMEKFKQTPMKT--LKA------LQELIADV-------------RDHLDLI 181
Query: 185 KCPVLIAWGDKDPWEPIELGRA-YGNFDSVE-DFIVLPNVGH 224
P + D + Y +S GH
Sbjct: 182 YAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGH 223
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-07
Identities = 39/238 (16%), Positives = 69/238 (28%), Gaps = 60/238 (25%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
LA + V DL GYG S K P D Y+F A D + ++
Sbjct: 48 LANEYTVVCADLRGYGGSSK--PVGAPDHANYSFRAMA-------SDQRELMRTLGFERF 98
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISL------RMLHIKKQPWYGRPLIRSFQN 109
+ ++ GG G + A+ P+ + +L+I + + ++ Q
Sbjct: 99 HLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYW--HWYFLQQP 156
Query: 110 -------LLRNTAA--GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160
+ + + AT + EE ++ P G
Sbjct: 157 APYPEKVIGADPDTFYEGCLFGWGATGADG---------FDPEQLEEYRKQWRDPAAIHG 207
Query: 161 -------AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDP----WEPIELGRAY 207
+ E +L QV+CP L+ G +E +
Sbjct: 208 SCCDYRAGGTIDFE-------LDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPR 258
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 5e-07
Identities = 38/233 (16%), Positives = 70/233 (30%), Gaps = 51/233 (21%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-------DQA 55
LA + V + DL GYG S + P Y+ A +D V+ +Q
Sbjct: 48 LANNFTVVATDLRGYGDSSR--PASVPHHINYSKRVMA-------QDQVEVMSKLGYEQF 98
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNI--------SLRMLHIKKQPWYGRPLIRSF 107
+ + + G V + A+ P + + LL+I + +
Sbjct: 99 YVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHW----FFLI 154
Query: 108 QN-------LLRNTAA--GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158
Q + N K K + Q E + QP +
Sbjct: 155 QPDNLPETLIGANPEYYLRKCLEKWGKDFSAF----------HPQALAEYIRCFSQPAVI 204
Query: 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDP----WEPIELGRAY 207
+ + ++ ++ CPVL+ WG+K ++ + R
Sbjct: 205 HATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRER 257
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 7e-07
Identities = 35/227 (15%), Positives = 59/227 (25%), Gaps = 53/227 (23%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNS 61
+ VY G+G + P D K + W ++ + + + F S
Sbjct: 47 RSGYGVYVPLFSGHGTVE---PLDILTKG--NPDIWWAESSAAVAHMTAKYAKVFVFGLS 101
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG+ ++A P I G + + L H P + L +
Sbjct: 102 LGGIFAMKALETLPGITAGGVFSSPILPGKH-HLVPGF-LKYAEYMNRLAGKSDESTQIL 159
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
+ L ++ A V L
Sbjct: 160 AYLPGQ--------------------LAA------IDQFATTV-------------AADL 180
Query: 182 PQVKCPVLIAWGDKD----PWEPIELGRAYGNFDSVEDFIVLPNVGH 224
VK P I +D +L A N V+ F + H
Sbjct: 181 NLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVD-FHWYDDAKH 226
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 9e-07
Identities = 38/223 (17%), Positives = 70/223 (31%), Gaps = 51/223 (22%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGL 65
V L G+G D TF W + + + + + F S+GG
Sbjct: 69 TVCLPRLKGHGTH----YEDMER---TTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGT 121
Query: 66 VGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVA 125
+ L A P+I G++ +N ++ + I G L R ++
Sbjct: 122 LTLYLAEHHPDI-CGIVPINAAVDIPAIAAGMTGGGELPRYLDSI--------------- 165
Query: 126 TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVK 185
++N + T L++ L A + L ++
Sbjct: 166 -GSDLKNPDVKELAYEKTPTASLLQ------LARLMAQT-------------KAKLDRIV 205
Query: 186 CPVLIAWGDKD----PWEPIELGRAYGNFDSVEDFIVLPNVGH 224
CP LI D+D P + + + + + + L N H
Sbjct: 206 CPALIFVSDEDHVVPPGNADIIFQGISSTEK--EIVRLRNSYH 246
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-06
Identities = 30/235 (12%), Positives = 67/235 (28%), Gaps = 37/235 (15%)
Query: 3 LAKSH-RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC-KDVVKDQAFFIC- 59
LA++ ++DL G+G + + + F + V + +
Sbjct: 39 LARTQCAALTLDLPGHGTNPERHC--------DNFAEAVEMIEQTVQAHVTSEVPVILVG 90
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNIS-----LRMLHIKKQPW-YGRPLIRSFQNLLRN 113
S+GG + + + I L+ K W + + + F
Sbjct: 91 YSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIE 150
Query: 114 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSG 173
+ + V +S + + + L+ + L + A + L
Sbjct: 151 HVLSDWYQQAVFSSLN------------HEQRQTLIAQRSA-NLGSSVAHMLLATSLAKQ 197
Query: 174 GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
L L +K P+ G++D + + + + GH
Sbjct: 198 PYLLPA-LQALKLPIHYVCGEQD-----SKFQQLAESSGLS-YSQVAQAGHNVHH 245
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 2e-06
Identities = 34/228 (14%), Positives = 71/228 (31%), Gaps = 16/228 (7%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSI 62
+ H V ++DL G + K F + S L +F + ++ + +++
Sbjct: 37 SSGHNVTALDLGASGINPKQ------ALQIPNFSDYLSPLMEFMASLPANEKIILVGHAL 90
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GGL +A PE + L+ + +I + L
Sbjct: 91 GGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTN 150
Query: 123 MVATSESVRNILCQ-CYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
T + L Y+ + L +++P A D+ E L +
Sbjct: 151 PPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKE------VVLSSKRY 204
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
VK ++A ++ E + + ++ + H +S
Sbjct: 205 GSVKRVFIVA--TENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMS 250
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 5e-06
Identities = 30/232 (12%), Positives = 63/232 (27%), Gaps = 25/232 (10%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSI 62
A H+V ++DL G + +F+ ++ L F + + + + S
Sbjct: 28 ALGHKVTALDLAASGVDPRQIEEI------GSFDEYSEPLLTFLEALPPGEKVILVGESC 81
Query: 63 GGLVGLQAAVMEPEICRGMILLNISL-----RMLHIKKQPWYGRPLIRSFQNLLRNTAAG 117
GGL AA E + N L ++ + P +
Sbjct: 82 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGK 141
Query: 118 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP 177
++ + + + Y EL + + + G
Sbjct: 142 EITGLKLGFTL----LRENLYTLCGPEEYELAKMLTRKGSLFQNILAK-------RPFFT 190
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
+E +K + D+D E + + H Q++
Sbjct: 191 KEGYGSIKKIYVWT--DQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLT 240
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 45.7 bits (107), Expect = 6e-06
Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 6/125 (4%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQAFFICNSI 62
VY+ID + R + + TW S + + + + ++ + S
Sbjct: 94 FNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESF 153
Query: 63 GGLVGLQAAVM-EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
GG+ L + + +G+ILL+ I+ + +Y + + +
Sbjct: 154 GGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPK-FYTPEVNSIEEMEAKGIYVIPSRG 212
Query: 122 KMVAT 126
Sbjct: 213 GPNNP 217
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 6e-06
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 9/72 (12%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L + + Y +DL GYG ++ P E A + F + + +
Sbjct: 38 ALPEGYAFYLLDLPGYGRTEGPR---------MAPEELAHFVAGFAVMMNLGAPWVLLRG 88
Query: 62 IGGLVGLQAAVM 73
+G +G +
Sbjct: 89 LGLALGPHLEAL 100
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 7e-06
Identities = 46/251 (18%), Positives = 92/251 (36%), Gaps = 64/251 (25%)
Query: 38 TW--ASQLNDF-CKDVVKDQAFFI----CNSIGGLVG-LQA--AVMEPEIC-RGMILLNI 86
TW + + + + F++ CNS ++ LQ ++P R NI
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 87 SLRMLHIKKQPWYGRPLI--RSFQN-LL-----RNTAAGKLFY---KMVATS--ESVRNI 133
LR+ I+ + R L+ + ++N LL +N A F K++ T+ + V +
Sbjct: 224 KLRIHSIQAEL---RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF 280
Query: 134 LCQCYNDTSQVTEELVEKILQPGLETG-AADVFLEFICYSGGPLPEELL---PQVKCPVL 189
L ++ T + L + L+++ LP E+L P+ +
Sbjct: 281 L------SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS--I 332
Query: 190 IAWGDKDP---WEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLSYLH 246
IA +D W+ + + N D + I + L+ L
Sbjct: 333 IAESIRDGLATWDNWK----HVNCDKLTTII------------------ESSLNVLEPAE 370
Query: 247 TCRCYDQVAIF 257
+ +D++++F
Sbjct: 371 YRKMFDRLSVF 381
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 2e-05
Identities = 33/234 (14%), Positives = 70/234 (29%), Gaps = 27/234 (11%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSI 62
+ H+V ++DL G + + +TF ++ L + + D+ + +S
Sbjct: 35 SAGHKVTAVDLSAAGINPRR------LDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSF 88
Query: 63 GGLVGLQAAVMEPEICRGMILL-------NISLRMLHIKKQPWYGRPLIRSFQNLLRNTA 115
GG+ A PE + + N SL K ++ Q
Sbjct: 89 GGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNP 148
Query: 116 AGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGP 175
M+ + + + + + S EL + + +PG
Sbjct: 149 ENPGMS-MILGPQFMALKM---FQNCSVEDLELAKMLTRPGSLFFQDLAK-------AKK 197
Query: 176 LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
E V + ++D P+E + + + + H +S
Sbjct: 198 FSTERYGSV--KRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGMLS 249
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 9e-05
Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 28/193 (14%)
Query: 9 VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQA----FFICNSIGG 64
V++ D +G+G S+ R F + + + KD F + +S+GG
Sbjct: 72 VFAHDHVGHGQSEGE--RMVVSD----FHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGG 125
Query: 65 LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV 124
+ + A P GM+L++ L + + + + + ++L N ++G + ++
Sbjct: 126 AIAILTAAERPGHFAGMVLIS-PLVLANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVL 184
Query: 125 ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQV 184
+ +++ + +D L+ + ++ + E LP++
Sbjct: 185 SRNKTEVD---IYNSD------PLICR------AGLKVCFGIQL--LNAVSRVERALPKL 227
Query: 185 KCPVLIAWGDKDP 197
P L+ G D
Sbjct: 228 TVPFLLLQGSADR 240
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 1e-04
Identities = 31/230 (13%), Positives = 66/230 (28%), Gaps = 19/230 (8%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSI 62
A H+V ++DL G + + T + L + + + D+ + +S+
Sbjct: 29 AAGHKVTALDLAASGTDLRK------IEELRTLYDYTLPLMELMESLSADEKVILVGHSL 82
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA---AGKL 119
GG+ A P+ + L + + R+ +T G
Sbjct: 83 GGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSP 142
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEE 179
+ + + + + Y S L +++P +E
Sbjct: 143 EEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSK-------AKYFTDE 195
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
V + +D P E R + V + I + H +
Sbjct: 196 RFGSV--KRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLC 243
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 31/193 (16%), Positives = 71/193 (36%), Gaps = 28/193 (14%)
Query: 9 VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQA----FFICNSIGG 64
V++ D +G+G S+ R F + + + KD F + +S+GG
Sbjct: 90 VFAHDHVGHGQSEGE--RMVVSD----FHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGG 143
Query: 65 LVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV 124
+ + A P GM+L++ L + + + + + +L N + G + ++
Sbjct: 144 AIAILTAAERPGHFAGMVLIS-PLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVL 202
Query: 125 ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQV 184
+ +++ + +D L+ + ++ + E LP++
Sbjct: 203 SRNKTEVD---IYNSD------PLICR------AGLKVCFGIQL--LNAVSRVERALPKL 245
Query: 185 KCPVLIAWGDKDP 197
P L+ G D
Sbjct: 246 TVPFLLLQGSADR 258
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* Length = 236 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 2e-04
Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 13/65 (20%)
Query: 169 ICYSGGPLPEEL--LPQVKCPVLIAWGDKDPWEPIE-------LGRAYGNFDSVEDFIVL 219
+ Y G L ++L +P+VK P L G +D + P A
Sbjct: 142 VGYYGVGLEKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLL----QVHWY 197
Query: 220 PNVGH 224
GH
Sbjct: 198 EEAGH 202
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 260 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.98 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.98 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.98 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.98 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.98 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.97 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.97 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.97 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.97 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.97 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.97 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.97 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.97 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.97 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.97 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.97 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.97 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.95 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.97 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.97 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.97 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.97 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.97 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.97 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.97 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.97 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.97 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.96 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.96 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.96 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.96 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.96 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.96 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.96 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.96 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.96 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.96 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.96 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.95 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.95 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.95 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.95 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.95 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.95 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.94 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.94 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.93 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.93 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.93 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.92 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.92 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.92 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.92 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.92 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.92 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.92 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.91 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.91 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.91 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.91 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.91 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.91 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.91 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.91 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.9 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.9 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.9 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.9 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.9 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.9 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.9 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.89 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.88 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.88 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.88 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.88 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.88 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.87 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.87 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.87 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.86 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.86 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.86 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.86 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.85 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.85 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.85 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.85 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.85 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.85 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.84 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.84 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.84 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.84 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.84 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.83 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.83 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.83 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.82 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.81 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.81 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.81 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.81 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.81 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.8 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.8 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.8 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.8 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.8 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.79 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.79 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.78 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.78 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.78 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.78 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.77 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.77 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.77 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.77 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.76 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.76 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.75 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.75 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.74 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.74 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.74 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.73 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.73 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.73 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.73 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.73 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.72 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.72 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.71 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.71 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.7 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.7 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.69 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.69 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.69 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.68 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.67 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.66 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.65 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.65 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.65 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.64 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.63 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.62 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.59 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.58 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.57 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.56 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.55 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.55 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.54 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.51 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.51 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.5 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.5 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.48 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.47 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.47 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.45 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.44 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.44 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.44 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.43 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.41 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.4 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.36 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.35 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.26 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.18 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.1 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.09 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.02 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.01 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 98.97 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 98.89 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.76 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.65 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.57 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.39 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.32 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.16 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.16 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.11 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.05 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 97.94 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.86 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.82 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 97.81 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 97.8 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.79 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.71 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 97.69 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.69 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 97.45 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.4 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 97.4 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.37 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 97.28 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 97.28 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.24 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 97.23 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 97.21 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 97.21 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 97.09 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 97.07 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 97.04 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.03 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.83 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 96.79 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 96.79 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 96.79 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 96.72 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 96.66 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 96.55 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 96.3 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 96.26 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 96.24 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 96.19 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 96.14 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.09 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 96.05 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 95.89 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 95.47 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 95.45 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 94.04 | |
| 3im8_A | 307 | Malonyl acyl carrier protein transacylase; fatty a | 88.31 | |
| 3ptw_A | 336 | Malonyl COA-acyl carrier protein transacylase; str | 87.84 | |
| 2qc3_A | 303 | MCT, malonyl COA-acyl carrier protein transacylase | 87.31 | |
| 2cuy_A | 305 | Malonyl COA-[acyl carrier protein] transacylase; t | 87.05 | |
| 2h1y_A | 321 | Malonyl coenzyme A-acyl carrier protein transacyl; | 86.56 | |
| 4amm_A | 401 | DYNE8; transferase; 1.40A {Micromonospora chersina | 86.34 | |
| 1mla_A | 309 | Malonyl-coenzyme A acyl carrier protein transacyla | 86.23 | |
| 3k89_A | 314 | Malonyl COA-ACP transacylase; bacterial blight, XO | 86.21 | |
| 3pa8_A | 254 | Toxin B; CLAN CD cysteine protease, protease, toxi | 85.87 | |
| 3g87_A | 394 | Malonyl COA-acyl carrier protein transacylase; ssg | 85.59 | |
| 2qub_A | 615 | Extracellular lipase; beta roll, alpha/beta hydrol | 85.37 | |
| 3qat_A | 318 | Malonyl COA-acyl carrier protein transacylase; sea | 84.44 | |
| 3tzy_A | 491 | Polyketide synthase PKS13; acyltransferase, long f | 84.33 | |
| 3tqe_A | 316 | Malonyl-COA-[acyl-carrier-protein] transacylase; f | 83.69 | |
| 3ho6_A | 267 | Toxin A; inositol phosphate, enterotoxin; HET: IHP | 83.29 | |
| 3ezo_A | 318 | Malonyl COA-acyl carrier protein transacylase; ssg | 82.74 | |
| 1nm2_A | 317 | Malonyl COA:acyl carrier protein malonyltransfera; | 80.88 | |
| 3sbm_A | 281 | DISD protein, DSZD; transferase; HET: P6G; 1.35A { | 80.87 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=223.77 Aligned_cols=214 Identities=19% Similarity=0.210 Sum_probs=145.2
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++
T Consensus 49 ~L~~~~~vi~~D~rG~G~S~~~~-------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~l 121 (266)
T 3om8_A 49 ALTRHFRVLRYDARGHGASSVPP-------GPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERL 121 (266)
T ss_dssp HHHTTCEEEEECCTTSTTSCCCC-------SCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HhhcCcEEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhhee
Confidence 46789999999999999998765 46899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhh---HHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA---GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
|++++...... .......+......... ............... ........... .....
T Consensus 122 vl~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~~~~-- 183 (266)
T 3om8_A 122 VLANTSAWLGP-------AAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLE--------RAEPVVERFRA-MLMAT-- 183 (266)
T ss_dssp EEESCCSBCCC-------SHHHHHHHHHHHHCSSSHHHHHHHHHHHSCHHHHH--------SCCHHHHHHHH-HHHTS--
T ss_pred eEecCcccCCc-------hhHHHHHHHHHHccccHHHHHHHHHHHhcChhhhh--------cChHHHHHHHH-HHHhC--
Confidence 99998643210 00001111111000000 000001111100000 00000111111 11110
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
....+..........+..+.+.++++|+|+|+|++|.++|++..+.+++.+|++++++++ +||++++|+|+++++.|
T Consensus 184 --~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~a~~~~i~-~gH~~~~e~p~~~~~~i 260 (266)
T 3om8_A 184 --NRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLP-AVHLSNVEFPQAFEGAV 260 (266)
T ss_dssp --CHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEES-CCSCHHHHCHHHHHHHH
T ss_pred --CHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEeC-CCCCccccCHHHHHHHH
Confidence 111111111112223345678899999999999999999999999999999999999998 79999999999999999
Q ss_pred HHhhh
Q 024971 239 LHTLS 243 (260)
Q Consensus 239 ~~~l~ 243 (260)
.+|++
T Consensus 261 ~~Fl~ 265 (266)
T 3om8_A 261 LSFLG 265 (266)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99985
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=218.42 Aligned_cols=222 Identities=18% Similarity=0.167 Sum_probs=145.5
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 37 ~L~~~~~vi~~Dl~G~G~S~~~~------~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~l 110 (268)
T 3v48_A 37 VLEQEYQVVCYDQRGTGNNPDTL------AEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVL 110 (268)
T ss_dssp HHHTTSEEEECCCTTBTTBCCCC------CTTCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred HHhhcCeEEEECCCCCCCCCCCc------cccCCHHHHHHHHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhChhhceEE
Confidence 36788999999999999998764 246899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHH---HHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY---KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
|++++...... ....................... .......... . .......+...... ...
T Consensus 111 vl~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~-~~~- 175 (268)
T 3v48_A 111 ISVNGWLRINA------HTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMA----A---RAPRLEAEDALALA-HFQ- 175 (268)
T ss_dssp EEESCCSBCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH----T---THHHHHHHHHHHHH-TCC-
T ss_pred EEeccccccch------hhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhh----c---ccccchhhHHHHHh-hcC-
Confidence 99997542210 00000000000000000000000 0000000000 0 00000001111111 000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
. ..............+....+.++++|+|+|+|++|.++|.+..+.+.+.+|++++++++++||+++.|+|+++++.|
T Consensus 176 -~-~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i 253 (268)
T 3v48_A 176 -G-KNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALL 253 (268)
T ss_dssp -C-HHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCTTHHHHCHHHHHHHH
T ss_pred -c-hhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCcCeEEEeCCCCcchhhcCHHHHHHHH
Confidence 0 11111111111112235668899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcc
Q 024971 239 LHTLSYLH 246 (260)
Q Consensus 239 ~~~l~~~~ 246 (260)
.+|++...
T Consensus 254 ~~fl~~~~ 261 (268)
T 3v48_A 254 LNGLASLL 261 (268)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99997653
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=220.66 Aligned_cols=216 Identities=20% Similarity=0.322 Sum_probs=145.0
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
|+++|+|+++|+||||.|+.+. ...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|
T Consensus 51 L~~~~~vi~~Dl~G~G~S~~~~------~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lv 124 (282)
T 1iup_A 51 LSKFYRVIAPDMVGFGFTDRPE------NYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMV 124 (282)
T ss_dssp HTTTSEEEEECCTTSTTSCCCT------TCCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred hccCCEEEEECCCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHH
Confidence 6789999999999999998765 2368999999999999999999999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchH
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
++++...... ... .......... ....+...+............+...............
T Consensus 125 l~~~~~~~~~-------~~~---~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (282)
T 1iup_A 125 LMGAAGTRFD-------VTE---GLNAVWGYTP----------SIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQ 184 (282)
T ss_dssp EESCCCSCCC-------CCH---HHHHHHTCCS----------CHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHH
T ss_pred eeCCccCCCC-------CCH---HHHHHhcCCC----------cHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHH
Confidence 9998643210 000 0000000000 0001111111111111111112111111100011111
Q ss_pred HHHHHH--------HhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHH
Q 024971 163 DVFLEF--------ICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 163 ~~~~~~--------~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
..+..+ ..... ...+.+.++++|+|+|+|++|.++|.+..+.+.+.+|++++++++++||+++.|+|+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 262 (282)
T 1iup_A 185 ESFSSMFPEPRQRWIDALA--SSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRF 262 (282)
T ss_dssp HHHHHHSCSSTHHHHHHHC--CCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHH
T ss_pred HHHHHHHhccccccccccc--cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEECCCCCCccccCHHHH
Confidence 111110 00000 01246788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcc
Q 024971 235 SSACLHTLSYLH 246 (260)
Q Consensus 235 ~~~i~~~l~~~~ 246 (260)
++.|.+|++...
T Consensus 263 ~~~i~~fl~~~~ 274 (282)
T 1iup_A 263 NRLVVEFFNEAN 274 (282)
T ss_dssp HHHHHHHHHTC-
T ss_pred HHHHHHHHhcCC
Confidence 999999997643
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=217.40 Aligned_cols=222 Identities=14% Similarity=0.109 Sum_probs=146.1
Q ss_pred CCCCccEEEEEcCCCCCCCCC-CCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDK-PNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+. +.. ...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|+ |++
T Consensus 48 ~L~~~~~vi~~Dl~G~G~S~~~~~~-----~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~ 121 (286)
T 2yys_A 48 DYLEGFRVVYFDQRGSGRSLELPQD-----PRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEG 121 (286)
T ss_dssp GGCTTSEEEEECCTTSTTSCCCCSC-----GGGCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEE
T ss_pred HhcCCCEEEEECCCCCCCCCCCccC-----cccCcHHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hhe
Confidence 578899999999999999987 431 0168999999999999999999999999999999999999999999 999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHh-hh--hh----hhhhHHHHHHHhcChH-HHHHHHHhccCCCCcccHHHHHHH
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQ-NL--LR----NTAAGKLFYKMVATSE-SVRNILCQCYNDTSQVTEELVEKI 152 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 152 (260)
+|++++...... ....+. .. .. ....... ... .... ...... .+........+.....
T Consensus 122 lvl~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 187 (286)
T 2yys_A 122 AILLAPWVNFPW----------LAARLAEAAGLAPLPDPEENLKEA-LKR-EEPKALFDRLM--FPTPRGRMAYEWLAEG 187 (286)
T ss_dssp EEEESCCCBHHH----------HHHHHHHHTTCCCCSCHHHHHHHH-HHH-SCHHHHHHHHH--CSSHHHHHHHHHHHHH
T ss_pred EEEeCCccCcHH----------HHHHHHHHhccccchhHHHHHHHH-hcc-CChHHHHHhhh--ccCCccccChHHHHHH
Confidence 999998641110 000000 00 00 0000000 000 0111 111111 1100000112222222
Q ss_pred hccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchh
Q 024971 153 LQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~ 232 (260)
............+ ........+....++++++|+|+|+|++|.+++.+ .+.+.+ .|++++++++++||+++.|+|+
T Consensus 188 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~-~~~~~~~~i~~~gH~~~~e~p~ 263 (286)
T 2yys_A 188 AGILGSDAPGLAF--LRNGLWRLDYTPYLTPERRPLYVLVGERDGTSYPY-AEEVAS-RLRAPIRVLPEAGHYLWIDAPE 263 (286)
T ss_dssp TTCCCCSHHHHHH--HHTTGGGCBCGGGCCCCSSCEEEEEETTCTTTTTT-HHHHHH-HHTCCEEEETTCCSSHHHHCHH
T ss_pred Hhhccccccchhh--cccccccCChhhhhhhcCCCEEEEEeCCCCcCCHh-HHHHHh-CCCCCEEEeCCCCCCcChhhHH
Confidence 2222111111111 11111122235568889999999999999999999 888988 9999999999999999999999
Q ss_pred HHHHHHHHhhhhccc
Q 024971 233 SLSSACLHTLSYLHT 247 (260)
Q Consensus 233 ~~~~~i~~~l~~~~~ 247 (260)
++++.|.+|++.+..
T Consensus 264 ~~~~~i~~fl~~~~~ 278 (286)
T 2yys_A 264 AFEEAFKEALAALVP 278 (286)
T ss_dssp HHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHhhhh
Confidence 999999999976543
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=216.20 Aligned_cols=223 Identities=18% Similarity=0.140 Sum_probs=148.0
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
|+++|+|+++|+||||.|+.+. ...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|
T Consensus 60 L~~~~~vi~~D~~G~G~S~~~~------~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lv 133 (286)
T 2puj_A 60 VDAGYRVILKDSPGFNKSDAVV------MDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLI 133 (286)
T ss_dssp HHTTCEEEEECCTTSTTSCCCC------CSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HhccCEEEEECCCCCCCCCCCC------CcCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEE
Confidence 5677999999999999998765 1368999999999999999999999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc-cCCccch
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ-PGLETGA 161 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 161 (260)
++++........ ..........+...... .........+...........++....... .......
T Consensus 134 l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (286)
T 2puj_A 134 LMGPGGLGPSMF--APMPMEGIKLLFKLYAE-----------PSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEH 200 (286)
T ss_dssp EESCSCCCCCSS--SCSSCHHHHHHHHHHHS-----------CCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred EECccccCCCcc--cccchhhHHHHHHHhhC-----------CcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHH
Confidence 999875321000 00000011111111000 011112222222222211122222221111 0001111
Q ss_pred HHHHHHHHhhh--CCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 162 ADVFLEFICYS--GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 162 ~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
...+....... ...+....++++++|+|+|+|++|.++|.+..+.+.+.+|++++++++++||+++.|+|+++++.|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 280 (286)
T 2puj_A 201 LKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVI 280 (286)
T ss_dssp HHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred HHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCCCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 11111111100 0112345678899999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhh
Q 024971 240 HTLSY 244 (260)
Q Consensus 240 ~~l~~ 244 (260)
+|++.
T Consensus 281 ~fl~~ 285 (286)
T 2puj_A 281 DFLRH 285 (286)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99863
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-35 Score=216.05 Aligned_cols=234 Identities=14% Similarity=0.077 Sum_probs=145.1
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++.|+|+++|+||||.|+.+ ... ....++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++
T Consensus 51 ~L~~~~~via~Dl~G~G~S~~~-~~~--~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~l 127 (294)
T 1ehy_A 51 PLAEHYDVIVPDLRGFGDSEKP-DLN--DLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKA 127 (294)
T ss_dssp HHHTTSEEEEECCTTSTTSCCC-CTT--CGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEE
T ss_pred HHhhcCEEEecCCCCCCCCCCC-ccc--cccCcCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEE
Confidence 3667899999999999999875 200 0015899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCC-cchhHHHhhhhhhhhhHHHHHHHhcC----hHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 82 ILLNISLRMLHIKKQPWYG-RPLIRSFQNLLRNTAAGKLFYKMVAT----SESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
|+++++............. ...... ............ ... ......++...........++....+....
T Consensus 128 vl~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (294)
T 1ehy_A 128 AIFDPIQPDFGPVYFGLGHVHESWYS---QFHQLDMAVEVV--GSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNC 202 (294)
T ss_dssp EEECCSCTTC-----------CCHHH---HHTTCHHHHHHH--TSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHH
T ss_pred EEecCCCCCcchhhccchhccCceEE---EecCcchhHHHh--ccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHh
Confidence 9999753211100000000 000000 000000000000 001 111222222222222233344333333222
Q ss_pred CccchHHHHHHHHhhhCCCCC----CccCCCCCCCEEEEecCCCCCCCh-HHHHHhhccCCCccEEEeCCCCCCcchhch
Q 024971 157 LETGAADVFLEFICYSGGPLP----EELLPQVKCPVLIAWGDKDPWEPI-ELGRAYGNFDSVEDFIVLPNVGHCPQVSLY 231 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 231 (260)
...........++........ ...+.++++|+|+|+|++|.++|. +..+.+.+..|++++++++++||++++|+|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 282 (294)
T 1ehy_A 203 MKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKP 282 (294)
T ss_dssp TSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCH
T ss_pred cCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCceEEeCCCCCChhhhCH
Confidence 222222111111111111111 113458999999999999999883 566777777899999999999999999999
Q ss_pred hHHHHHHHHhhh
Q 024971 232 LSLSSACLHTLS 243 (260)
Q Consensus 232 ~~~~~~i~~~l~ 243 (260)
+++++.|.+|++
T Consensus 283 ~~~~~~i~~fl~ 294 (294)
T 1ehy_A 283 EIAIDRIKTAFR 294 (294)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhC
Confidence 999999999973
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=215.03 Aligned_cols=224 Identities=19% Similarity=0.220 Sum_probs=149.1
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++
T Consensus 61 ~L~~~~~via~Dl~G~G~S~~~~------~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~l 134 (291)
T 2wue_A 61 VLARHFHVLAVDQPGYGHSDKRA------EHGQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRL 134 (291)
T ss_dssp HHTTTSEEEEECCTTSTTSCCCS------CCSSHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEE
T ss_pred HHHhcCEEEEECCCCCCCCCCCC------CCCcCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEE
Confidence 36778999999999999998765 236899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++......... . ........+..... ..........+...........++..............
T Consensus 135 vl~~~~~~~~~~~~-~-~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (291)
T 2wue_A 135 VLMGPGGLSINLFA-P-DPTEGVKRLSKFSV-----------APTRENLEAFLRVMVYDKNLITPELVDQRFALASTPES 201 (291)
T ss_dssp EEESCSSSCCCSSS-C-SSCHHHHHHHHHHH-----------SCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHH
T ss_pred EEECCCCCCccccc-c-ccchhhHHHHHHhc-----------cCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchH
Confidence 99998753210000 0 00011111111000 01111222222222222222222322222211111111
Q ss_pred HHHHHHHH-hhhC--CCCCC--ccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHH
Q 024971 162 ADVFLEFI-CYSG--GPLPE--ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 162 ~~~~~~~~-~~~~--~~~~~--~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
........ .... ..... ..++++++|+|+|+|++|.++|.+..+.+.+..|++++++++++||+++.|+|+++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~ 281 (291)
T 2wue_A 202 LTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNK 281 (291)
T ss_dssp HHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHHHHHHSTTEEEEEESSCCSCHHHHTHHHHHH
T ss_pred HHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCChhhhCHHHHHH
Confidence 11111111 1111 00012 5678899999999999999999998888988899999999999999999999999999
Q ss_pred HHHHhhhh
Q 024971 237 ACLHTLSY 244 (260)
Q Consensus 237 ~i~~~l~~ 244 (260)
.|.+|++.
T Consensus 282 ~i~~fl~~ 289 (291)
T 2wue_A 282 LTIEFLGG 289 (291)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHhc
Confidence 99999864
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=214.99 Aligned_cols=217 Identities=18% Similarity=0.193 Sum_probs=142.9
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++
T Consensus 48 ~L~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~l 120 (266)
T 2xua_A 48 ALSKHFRVLRYDTRGHGHSEAPK-------GPYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERV 120 (266)
T ss_dssp HHHTTSEEEEECCTTSTTSCCCS-------SCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHhcCeEEEEecCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhhee
Confidence 35678999999999999998754 45899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCC-CcccHHHHHHHhccCCccc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDT-SQVTEELVEKILQPGLETG 160 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 160 (260)
|++++...... ........... ........ ........+... ....++..+.+.......
T Consensus 121 vl~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 181 (266)
T 2xua_A 121 ALCNTAARIGS-------PEVWVPRAVKA-RTEGMHAL----------ADAVLPRWFTADYMEREPVVLAMIRDVFVHT- 181 (266)
T ss_dssp EEESCCSSCSC-------HHHHHHHHHHH-HHHCHHHH----------HHHHHHHHSCHHHHHHCHHHHHHHHHHHHTS-
T ss_pred EEecCCCCCCc-------hHHHHHHHHHH-HhcChHHH----------HHHHHHHHcCcccccCCHHHHHHHHHHHhhC-
Confidence 99998643210 00000000000 00000000 000000000000 000011111111100000
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLH 240 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 240 (260)
....+..........+..+.+.++++|+++++|++|.++|++..+.+.+.++++++++++ +||+++.|+|+++++.|.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~ 260 (266)
T 2xua_A 182 DKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAGARYVELD-ASHISNIERADAFTKTVVD 260 (266)
T ss_dssp CHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEES-CCSSHHHHTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhCCCCEEEEec-CCCCchhcCHHHHHHHHHH
Confidence 011111111111112235567889999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhc
Q 024971 241 TLSYL 245 (260)
Q Consensus 241 ~l~~~ 245 (260)
|++..
T Consensus 261 fl~~~ 265 (266)
T 2xua_A 261 FLTEQ 265 (266)
T ss_dssp HHTC-
T ss_pred HHHhc
Confidence 99753
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=213.14 Aligned_cols=219 Identities=17% Similarity=0.153 Sum_probs=145.1
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCcc-chhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl 83 (260)
+||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+|.++|+ +|+++|+
T Consensus 49 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl 121 (277)
T 1brt_A 49 AGYRVITYDRRGFGQSSQPT-------TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAF 121 (277)
T ss_dssp TTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEE
T ss_pred CCCEEEEeCCCCCCCCCCCC-------CCccHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEE
Confidence 47999999999999998754 468999999999999999999999999999999999999999999 9999999
Q ss_pred eccCccccccCCC-CCC--CcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCC----CCcccHHHHHHHhccC
Q 024971 84 LNISLRMLHIKKQ-PWY--GRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND----TSQVTEELVEKILQPG 156 (260)
Q Consensus 84 ~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 156 (260)
+++.......... +.. .......+........ ...........+.. .....++....+....
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (277)
T 1brt_A 122 LASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADR-----------YAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTA 190 (277)
T ss_dssp ESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCH-----------HHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHH
T ss_pred ecCcCccccccccCccccccHHHHHHHHHHHhcCc-----------hhhHHHHHHHHhhccccccccCCHHHHHHHHHHH
Confidence 9985322110000 000 0000111110000000 00011111111110 1112233333222211
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHH-HHhhccCCCccEEEeCCCCCCcchhchhHHH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
.... ........... ..+..+.++++++|+|+++|++|.++|.+.. +.+.+.+|++++++++++||+++.|+|++++
T Consensus 191 ~~~~-~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 268 (277)
T 1brt_A 191 ASGG-FFAAAAAPTTW-YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVN 268 (277)
T ss_dssp HHSC-HHHHHHGGGGT-TCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHH
T ss_pred hccc-hHHHHHHHHHH-hccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCCCCcEEEeCCCCcchhhhCHHHHH
Confidence 1111 11111111112 2333556788999999999999999998887 8888889999999999999999999999999
Q ss_pred HHHHHhhh
Q 024971 236 SACLHTLS 243 (260)
Q Consensus 236 ~~i~~~l~ 243 (260)
+.|.+|++
T Consensus 269 ~~i~~fl~ 276 (277)
T 1brt_A 269 TALLAFLA 276 (277)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999985
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=210.09 Aligned_cols=223 Identities=15% Similarity=0.123 Sum_probs=142.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhh-Cccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-EPEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lv 82 (260)
++||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++|+||||||.+++.+++. +|++|+++|
T Consensus 52 ~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lv 124 (281)
T 3fob_A 52 EAGYRVITYDRRGFGKSSQPW-------EGYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVV 124 (281)
T ss_dssp HTTEEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEE
T ss_pred hCCCEEEEeCCCCCCCCCCCc-------cccCHHHHHHHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEE
Confidence 458999999999999998765 468999999999999999999999999999999988877665 589999999
Q ss_pred EeccCccccccCCCCCCCcchh-HHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCC---CCcccHHHHHHHhccCCc
Q 024971 83 LLNISLRMLHIKKQPWYGRPLI-RSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND---TSQVTEELVEKILQPGLE 158 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 158 (260)
++++......... ........ ........ ..... .......+....+.. .....+............
T Consensus 125 l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (281)
T 3fob_A 125 FAGAVPPYLYKSE-DHPEGALDDATIETFKS-GVIND-------RLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAG 195 (281)
T ss_dssp EESCCCSCCBCCS-SSTTCSBCHHHHHHHHH-HHHHH-------HHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHT
T ss_pred EecCCCcchhccc-cccccccchhHHHHHHH-Hhhhh-------HHHHHHHHHHHhcccccccccchHHHHHHhhhhhcc
Confidence 9997643211100 00000000 00100000 00000 001111111111111 112222222221111111
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHH-HHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
.. ..............+..+.++++++|+|+|+|++|.++|.+.. +.+.+.+|++++++++++||+++.|+|+++++.
T Consensus 196 ~~-~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~ 274 (281)
T 3fob_A 196 AS-PKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEA 274 (281)
T ss_dssp SC-HHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHH
T ss_pred cC-hHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhCCCceEEEeCCCCCchhhhhHHHHHHH
Confidence 11 1111111111112233556789999999999999999998865 667778999999999999999999999999999
Q ss_pred HHHhhh
Q 024971 238 CLHTLS 243 (260)
Q Consensus 238 i~~~l~ 243 (260)
|.+|++
T Consensus 275 i~~Fl~ 280 (281)
T 3fob_A 275 LLLFLK 280 (281)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 999986
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=217.65 Aligned_cols=235 Identities=16% Similarity=0.172 Sum_probs=147.3
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+||++|+||||.|+.+. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++
T Consensus 51 ~L~~~~~via~Dl~G~G~S~~~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~l 123 (316)
T 3afi_E 51 LVSPVAHCIAPDLIGFGQSGKPD-------IAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGL 123 (316)
T ss_dssp HHTTTSEEEEECCTTSTTSCCCS-------SCCCHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEE
T ss_pred HHhhCCEEEEECCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhhe
Confidence 36778999999999999998754 46899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCC--CCc-----chhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc
Q 024971 82 ILLNISLRMLHIKKQPW--YGR-----PLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
|++++............ ... ..................... ............. .......+....+..
T Consensus 124 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 199 (316)
T 3afi_E 124 AFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMIL--EANAFVERVLPGG--IVRKLGDEEMAPYRT 199 (316)
T ss_dssp EEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTSTTHHHHHHT--TSCHHHHTTTGGG--CSSCCCHHHHHHHHT
T ss_pred eeeccCCCcchhhhccchhhccccccchhHHHHHHHhcCCchhhHHHh--ccchHHHHhcccc--cCCCCCHHHHHHHHh
Confidence 99997432100000000 000 000000000000000000000 0000000000000 011222333333332
Q ss_pred cCCccchHHHHHHHHhhhCCC-----------CCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCC
Q 024971 155 PGLETGAADVFLEFICYSGGP-----------LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVG 223 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g 223 (260)
.............+....... .....++++++|+|+|+|++|.++|.+..+.+.+.+|++++++++++|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~G 279 (316)
T 3afi_E 200 PFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGL 279 (316)
T ss_dssp TCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSSEEEEEEEEEC
T ss_pred hcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCCCCeEEEcCCCC
Confidence 221111111111111100000 001234568999999999999999999999999999999999999999
Q ss_pred CCcchhchhHHHHHHHHhhhhccc
Q 024971 224 HCPQVSLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 224 H~~~~~~p~~~~~~i~~~l~~~~~ 247 (260)
|++++|+|+++++.|.+|++....
T Consensus 280 H~~~~e~p~~~~~~i~~fl~~~~~ 303 (316)
T 3afi_E 280 HYLQEDHADAIGRSVAGWIAGIEA 303 (316)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhhCHHHHHHHHHHHHhhcCC
Confidence 999999999999999999986544
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=210.48 Aligned_cols=220 Identities=17% Similarity=0.144 Sum_probs=143.2
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
|+++|+|+++|+||||.|+.+.. ..++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|
T Consensus 39 L~~~~~vi~~Dl~G~G~S~~~~~------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 112 (269)
T 2xmz_A 39 FTDNYHVITIDLPGHGEDQSSMD------ETWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLI 112 (269)
T ss_dssp HHTTSEEEEECCTTSTTCCCCTT------SCCCHHHHHHHHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEE
T ss_pred HhhcCeEEEecCCCCCCCCCCCC------CccCHHHHHHHHHHHHHHcCCCcEEEEEECchHHHHHHHHHhCchheeeeE
Confidence 56779999999999999987651 257999999999999999999999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCC-----CCcccHHHHHHHhccCC
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND-----TSQVTEELVEKILQPGL 157 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 157 (260)
++++.+... .. ................+.. .....++...... ......+....+.....
T Consensus 113 l~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (269)
T 2xmz_A 113 LESTSPGIK---------EE-ANQLERRLVDDARAKVLDI-----AGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRL 177 (269)
T ss_dssp EESCCSCCS---------SH-HHHHHHHHHHHHHHHHHHH-----HCHHHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHH
T ss_pred EEcCCcccC---------Cc-hhHHHHhhhhhHHHHhhcc-----ccHHHHHHHHHhCccccccccCCHHHHHHHHHHHh
Confidence 999854211 00 0000000000000000000 0011111111100 00012222222111100
Q ss_pred ccchHHHHHHHH---hhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHH
Q 024971 158 ETGAADVFLEFI---CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 158 ~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
... ...+.... ......+..+.++++++|+++|+|++|.+++.+..+ +.+..|++++++++++||+++.|+|+++
T Consensus 178 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 255 (269)
T 2xmz_A 178 SQS-PHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLIPNSKCKLISATGHTIHVEDSDEF 255 (269)
T ss_dssp TSC-HHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHSTTEEEEEETTCCSCHHHHSHHHH
T ss_pred ccC-cHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhCCCcEEEEeCCCCCChhhcCHHHH
Confidence 111 11111111 111222334567889999999999999998887755 7778899999999999999999999999
Q ss_pred HHHHHHhhhhc
Q 024971 235 SSACLHTLSYL 245 (260)
Q Consensus 235 ~~~i~~~l~~~ 245 (260)
++.|.+|++..
T Consensus 256 ~~~i~~fl~~~ 266 (269)
T 2xmz_A 256 DTMILGFLKEE 266 (269)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999753
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=207.35 Aligned_cols=222 Identities=20% Similarity=0.219 Sum_probs=147.9
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
|+++|+|+++|+||||.|+.+. ...++++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|
T Consensus 63 l~~~~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lv 136 (289)
T 1u2e_A 63 VEAGYRVILLDCPGWGKSDSVV------NSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLV 136 (289)
T ss_dssp HHTTCEEEEECCTTSTTSCCCC------CSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HhcCCeEEEEcCCCCCCCCCCC------ccccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEE
Confidence 5677999999999999998765 2368999999999999999999999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC-Cccch
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG-LETGA 161 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 161 (260)
++++......... .........+..... ..........+...........++......... .....
T Consensus 137 l~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (289)
T 1u2e_A 137 LMGGGTGGMSLFT--PMPTEGIKRLNQLYR-----------QPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDH 203 (289)
T ss_dssp EESCSCCCCCSSS--CSSCHHHHHHHHHHH-----------SCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHH
T ss_pred EECCCcccccccc--ccchhhHHHHHHHHh-----------cchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhH
Confidence 9998653211000 000001111111100 011112222222222222222222222111100 00111
Q ss_pred HHHHHHHHhhh--CCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 162 ADVFLEFICYS--GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 162 ~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
...+....... ...+....+.++++|+|+|+|++|.++|.+..+.+.+.++++++++++++||+++.|+|+++++.|.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 283 (289)
T 1u2e_A 204 LENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVL 283 (289)
T ss_dssp HHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTTCEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCCcEEEEeCCCCCchhhcCHHHHHHHHH
Confidence 11111111111 1122345678899999999999999999999999999899999999999999999999999999999
Q ss_pred Hhhh
Q 024971 240 HTLS 243 (260)
Q Consensus 240 ~~l~ 243 (260)
+|++
T Consensus 284 ~fl~ 287 (289)
T 1u2e_A 284 NFLA 287 (289)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9985
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-34 Score=207.85 Aligned_cols=219 Identities=19% Similarity=0.260 Sum_probs=145.9
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHH----HHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETW----ASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
|+++|+|+++|+||||.|+.+. ...++++++ ++|+.+++++++.++++|+||||||.+|+.+|.++|++|
T Consensus 55 L~~~~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 128 (285)
T 1c4x_A 55 LAENFFVVAPDLIGFGQSEYPE------TYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERF 128 (285)
T ss_dssp HHTTSEEEEECCTTSTTSCCCS------SCCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGE
T ss_pred HhhCcEEEEecCCCCCCCCCCC------CcccchhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHh
Confidence 5677999999999999998755 135799999 999999999999999999999999999999999999999
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcc--cHHHHHHHhccC
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV--TEELVEKILQPG 156 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 156 (260)
+++|++++...... .. ......+...... .........+.......... ..+.........
T Consensus 129 ~~lvl~~~~~~~~~-----~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (285)
T 1c4x_A 129 DKVALMGSVGAPMN-----AR-PPELARLLAFYAD-----------PRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVA 191 (285)
T ss_dssp EEEEEESCCSSCCS-----SC-CHHHHHHHTGGGS-----------CCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHH
T ss_pred heEEEeccCCCCCC-----cc-chhHHHHHHHhcc-----------ccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhc
Confidence 99999998643210 00 0001111111000 00111222222222111111 122222111110
Q ss_pred CccchHHHHHHHHhhhC-----CCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhch
Q 024971 157 LETGAADVFLEFICYSG-----GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLY 231 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 231 (260)
........+........ .......+.++++|+++|+|++|.++|.+..+.+.+.++++++++++++||+++.|+|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 271 (285)
T 1c4x_A 192 NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERW 271 (285)
T ss_dssp HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHSH
T ss_pred cCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCeeeCHHHHHHHHHhCCCceEEEeCCCCcchhhcCH
Confidence 11111111111110000 0112245678999999999999999999999999998999999999999999999999
Q ss_pred hHHHHHHHHhhhh
Q 024971 232 LSLSSACLHTLSY 244 (260)
Q Consensus 232 ~~~~~~i~~~l~~ 244 (260)
+++++.|.+|++.
T Consensus 272 ~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 272 DAMGPMLMEHFRA 284 (285)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999964
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=208.53 Aligned_cols=214 Identities=17% Similarity=0.193 Sum_probs=140.1
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. .++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++
T Consensus 38 ~L~~~~~via~Dl~G~G~S~~~~--------~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 109 (255)
T 3bf7_A 38 DLVNDHNIIQVDVRNHGLSPREP--------VMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKL 109 (255)
T ss_dssp HHTTTSCEEEECCTTSTTSCCCS--------CCCHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHhhCcEEEecCCCCCCCCCCC--------CcCHHHHHHHHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhCcHhhccE
Confidence 46778999999999999998643 4689999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC---c
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL---E 158 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 158 (260)
|++++.+..... . ........+...... ...........+..... .......+..... .
T Consensus 110 vl~~~~p~~~~~---~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 171 (255)
T 3bf7_A 110 VAIDIAPVDYHV---R-RHDEIFAAINAVSES---------DAQTRQQAAAIMRQHLN-----EEGVIQFLLKSFVDGEW 171 (255)
T ss_dssp EEESCCSSCCCS---C-CCHHHHHHHHHHHHS---------CCCSHHHHHHHHTTTCC-----CHHHHHHHHTTEETTEE
T ss_pred EEEcCCcccCCc---c-cHHHHHHHHHhcccc---------ccccHHHHHHHHhhhcc-----hhHHHHHHHHhccCCce
Confidence 999864322110 0 000001111000000 00001111111111000 0111111111000 0
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
................ ...+.++++|+++|+|++|.+++++..+.+.+..|++++++++++||+++.|+|+++++.|
T Consensus 172 ~~~~~~~~~~~~~~~~---~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 248 (255)
T 3bf7_A 172 RFNVPVLWDQYPHIVG---WEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAI 248 (255)
T ss_dssp SSCHHHHHHTHHHHHC---CCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCTTEEECCBTTCCSCHHHHCHHHHHHHH
T ss_pred eecHHHHHhhhhhccc---cccccccCCCeEEEECCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCccccCCHHHHHHHH
Confidence 0011111111111100 1236789999999999999999999999899889999999999999999999999999999
Q ss_pred HHhhhh
Q 024971 239 LHTLSY 244 (260)
Q Consensus 239 ~~~l~~ 244 (260)
.+|++.
T Consensus 249 ~~fl~~ 254 (255)
T 3bf7_A 249 RRYLND 254 (255)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999863
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=210.76 Aligned_cols=217 Identities=21% Similarity=0.348 Sum_probs=144.4
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+ +. ...++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|++
T Consensus 61 ~L~~~~~vi~~Dl~G~G~S~-~~------~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~ 133 (296)
T 1j1i_A 61 ILARHYRVIAMDMLGFGKTA-KP------DIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNA 133 (296)
T ss_dssp HHTTTSEEEEECCTTSTTSC-CC------SSCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEE
T ss_pred HHhhcCEEEEECCCCCCCCC-CC------CCCCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhE
Confidence 35678999999999999998 44 2368999999999999999998 8999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|++++........ . . ...+... . .........+............+.............
T Consensus 134 lvl~~~~~~~~~~~--~----~-~~~~~~~---~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (296)
T 1j1i_A 134 LVLMGSAGLVVEIH--E----D-LRPIINY---D----------FTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEA 193 (296)
T ss_dssp EEEESCCBCCCC-----------------C---C----------SCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHH
T ss_pred EEEECCCCCCCCCC--c----h-HHHHhcc---c----------CCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcc
Confidence 99999875321100 0 0 0000000 0 000111111111111111122222221111000011
Q ss_pred hHHHHHHHHhh----hCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHH
Q 024971 161 AADVFLEFICY----SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 161 ~~~~~~~~~~~----~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
....+...... .........+.++++|+|+|+|++|.++|.+..+.+.+..+++++++++++||+++.|+|+++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 273 (296)
T 1j1i_A 194 TRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFAN 273 (296)
T ss_dssp HHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHH
T ss_pred hhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHCCCCEEEEECCCCCCchhcCHHHHHH
Confidence 11111111111 01111234567899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhc
Q 024971 237 ACLHTLSYL 245 (260)
Q Consensus 237 ~i~~~l~~~ 245 (260)
.|.+|++.-
T Consensus 274 ~i~~fl~~~ 282 (296)
T 1j1i_A 274 ATLSFLSLR 282 (296)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcc
Confidence 999999643
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-34 Score=207.18 Aligned_cols=228 Identities=21% Similarity=0.253 Sum_probs=144.1
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+.... ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 42 ~L~~~~~vi~~Dl~G~G~S~~~~~~~---~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l 118 (271)
T 1wom_A 42 AFEEDHRVILFDYVGSGHSDLRAYDL---NRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHL 118 (271)
T ss_dssp GGTTTSEEEECCCSCCSSSCCTTCCT---TGGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHhcCeEEEECCCCCCCCCCCcccc---cccccHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhCHHhhcce
Confidence 57789999999999999998643100 124689999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++.+....... .+................. ..+. .....+........ ..++..+.+........
T Consensus 119 vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~- 186 (271)
T 1wom_A 119 VMVGPSPCYLNDPP-EYYGGFEEEQLLGLLEMME--KNYI------GWATVFAATVLNQP--DRPEIKEELESRFCSTD- 186 (271)
T ss_dssp EEESCCSCCBEETT-TEECSBCHHHHHHHHHHHH--HCHH------HHHHHHHHHHHCCT--TCHHHHHHHHHHHHHSC-
T ss_pred EEEcCCCcCCCCCc-hhccCCCHHHHHHHHHHHh--hhHH------HHHHHHHHHHhcCC--CchHHHHHHHHHHhcCC-
Confidence 99998643211100 0000000000100000000 0000 00000000000000 01111111111000000
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHh
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHT 241 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 241 (260)
..............+....++++++|+++|+|++|.++|.+..+.+.+..+++++++++++||+++.|+|+++++.|.+|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 266 (271)
T 1wom_A 187 PVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGDY 266 (271)
T ss_dssp HHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCCCCEEEEeCCCCcCccccCHHHHHHHHHHH
Confidence 01111111111112234567889999999999999999999999998889999999999999999999999999999999
Q ss_pred hhh
Q 024971 242 LSY 244 (260)
Q Consensus 242 l~~ 244 (260)
++.
T Consensus 267 l~~ 269 (271)
T 1wom_A 267 LKA 269 (271)
T ss_dssp HHH
T ss_pred HHh
Confidence 964
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-34 Score=206.92 Aligned_cols=229 Identities=17% Similarity=0.135 Sum_probs=150.6
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++||+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 45 ~L~~~~~vi~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 119 (278)
T 3oos_A 45 PFTDHYSVYLVNLKGCGNSDSAKN-----DSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKI 119 (278)
T ss_dssp GGGGTSEEEEECCTTSTTSCCCSS-----GGGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEE
T ss_pred HhhcCceEEEEcCCCCCCCCCCCC-----cccCcHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeE
Confidence 477899999999999999987652 246799999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCC---CcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 82 ILLNISLRMLHIKKQPWY---GRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
|++++............. .......+........ .......... .+............+....+......
T Consensus 120 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (278)
T 3oos_A 120 IVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALN------DDSTVQEERK-ALSREWALMSFYSEEKLEEALKLPNS 192 (278)
T ss_dssp EEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHT------CTTSCHHHHH-HHHHHHHHHHCSCHHHHHHHTTSCCC
T ss_pred EEecCccccccccccchhhhhhchhHHHHHHHHHhhc------ccccCchHHH-HHHHHHhhcccCCcHHHHHHhhcccc
Confidence 999998763211111110 0111111111110000 0000000000 00000000011123333333333222
Q ss_pred cchHHHHHHHHh--hhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHH
Q 024971 159 TGAADVFLEFIC--YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 159 ~~~~~~~~~~~~--~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
..........+. .....+....+.++++|+++++|++|.++|.+..+.+.+.++++++++++++||+++.++|+++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 272 (278)
T 3oos_A 193 GKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQ 272 (278)
T ss_dssp CEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCSSCHHHHSHHHHHH
T ss_pred chhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCCCcEEEEcCCcCCCcccccHHHHHH
Confidence 222212222221 122223345677899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh
Q 024971 237 ACLHTL 242 (260)
Q Consensus 237 ~i~~~l 242 (260)
.|.+||
T Consensus 273 ~i~~fl 278 (278)
T 3oos_A 273 FVNDTL 278 (278)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999885
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-34 Score=209.53 Aligned_cols=235 Identities=14% Similarity=0.103 Sum_probs=151.9
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCc-eEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
|++.|+|+++|+||||.|+.+. ..++++++++|+.+++++++.++ ++++||||||.+++.+|.++|++|+++
T Consensus 53 L~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~l 125 (301)
T 3kda_A 53 LAKRFTVIAPDLPGLGQSEPPK-------TGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARL 125 (301)
T ss_dssp HTTTSEEEEECCTTSTTCCCCS-------SCSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEE
T ss_pred HHhcCeEEEEcCCCCCCCCCCC-------CCccHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEE
Confidence 5667999999999999998874 57899999999999999999888 999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCC-Cc-chhHHHhhhhhh-hhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 82 ILLNISLRMLHIKKQPWY-GR-PLIRSFQNLLRN-TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
|++++............. .. ............ ....... ...........++............+....+......
T Consensus 126 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (301)
T 3kda_A 126 VYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETL-IAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAK 204 (301)
T ss_dssp EEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTTHHHHH-HTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTS
T ss_pred EEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCcchHHHH-hccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhcc
Confidence 999997533211110000 00 000000000000 0001000 0001111223333333333334444444444333222
Q ss_pred cchHHHHHHHHhhh-----CCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhH
Q 024971 159 TGAADVFLEFICYS-----GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLS 233 (260)
Q Consensus 159 ~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 233 (260)
..........+... ........++++++|+++++|++| ++....+.+.+..+++++++++++||+++.|+|++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 282 (301)
T 3kda_A 205 PHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGAGG--MGTFQLEQMKAYAEDVEGHVLPGCGHWLPEECAAP 282 (301)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCEEEEEECSTTS--CTTHHHHHHHTTBSSEEEEEETTCCSCHHHHTHHH
T ss_pred ccccchHHHHHHhhccchhhcccchhhccccCcceEEEecCCC--CChhHHHHHHhhcccCeEEEcCCCCcCchhhCHHH
Confidence 22111111111100 000012345589999999999999 67788888888899999999999999999999999
Q ss_pred HHHHHHHhhhhccc
Q 024971 234 LSSACLHTLSYLHT 247 (260)
Q Consensus 234 ~~~~i~~~l~~~~~ 247 (260)
+++.|.+|++...+
T Consensus 283 ~~~~i~~~l~~~~~ 296 (301)
T 3kda_A 283 MNRLVIDFLSRGRH 296 (301)
T ss_dssp HHHHHHHHHTTSCC
T ss_pred HHHHHHHHHhhCch
Confidence 99999999987654
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=205.36 Aligned_cols=220 Identities=15% Similarity=0.149 Sum_probs=141.2
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC-ccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl 83 (260)
+||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+|+++ |++|+++|+
T Consensus 48 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl 120 (276)
T 1zoi_A 48 HGYRVVAHDRRGHGRSSQVW-------DGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVL 120 (276)
T ss_dssp TTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEE
T ss_pred CCCEEEEecCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEE
Confidence 47999999999999998654 4689999999999999999999999999999999999988887 999999999
Q ss_pred eccCccccccCC-CCCC-CcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHH-hccC---CCCcccHHHHHHHhccCC
Q 024971 84 LNISLRMLHIKK-QPWY-GRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILC-QCYN---DTSQVTEELVEKILQPGL 157 (260)
Q Consensus 84 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~ 157 (260)
+++......... .+.. .......+...... .....+..... ..+. ......+.....+.....
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (276)
T 1zoi_A 121 IAAVPPLMVQTPGNPGGLPKSVFDGFQAQVAS-----------NRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGM 189 (276)
T ss_dssp ESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHH-----------CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH
T ss_pred ecCCCccccccccccccccHHHHHHHHHHHHH-----------hHHHHHHHhhhccccccccccccccHHHHHHHHhhhh
Confidence 998543211000 0000 00000001000000 00011111111 1111 011122233322221111
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH-HHHHhhccCCCccEEEeCCCCCCcchhchhHHHH
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
... ..............+..+.++++++|+|+++|++|.++|.+ ..+.+.+..+++++++++++||+++.|+|+++++
T Consensus 190 ~~~-~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 268 (276)
T 1zoi_A 190 IGS-AKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINA 268 (276)
T ss_dssp HSC-HHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHTHHHHHH
T ss_pred hhh-HHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCcccChHHHHHHHHhhCCCceEEEcCCCCCchhhhCHHHHHH
Confidence 111 11111111111122334567789999999999999999987 5566777789999999999999999999999999
Q ss_pred HHHHhhh
Q 024971 237 ACLHTLS 243 (260)
Q Consensus 237 ~i~~~l~ 243 (260)
.|.+|++
T Consensus 269 ~i~~fl~ 275 (276)
T 1zoi_A 269 DLLAFIR 275 (276)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999985
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=202.88 Aligned_cols=223 Identities=16% Similarity=0.214 Sum_probs=137.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhh-Cccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-EPEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lv 82 (260)
++||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.++++ .|++|+++|
T Consensus 44 ~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lv 116 (271)
T 3ia2_A 44 SRGYRTIAFDRRGFGRSDQPW-------TGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLV 116 (271)
T ss_dssp TTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEE
T ss_pred hCCceEEEecCCCCccCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEE
Confidence 468999999999999998765 467999999999999999999999999999999877766655 589999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCC--CCcccHHHHHHHhccCCccc
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND--TSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 160 (260)
++++.......... .........+........... ......+....+.. ....................
T Consensus 117 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (271)
T 3ia2_A 117 LLGAVTPLFGQKPD-YPQGVPLDVFARFKTELLKDR--------AQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLAS 187 (271)
T ss_dssp EESCCCSBCBCBTT-BTTSBCHHHHHHHHHHHHHHH--------HHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSC
T ss_pred EEccCCccccCCCC-CcccccHHHHHHHHHHHHhhH--------HHHHHHhhHhhhccccccccCHHHHHHHHhhhhhcc
Confidence 99976432211100 000000011111000000000 00000000000000 01111221111111000011
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH-HHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
..............+....+.++++|+|+|+|++|.++|++. .+.+.+..+++++++++++||+++.|+|+++++.|.
T Consensus 188 -~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 266 (271)
T 3ia2_A 188 -LKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL 266 (271)
T ss_dssp -HHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH
T ss_pred -HHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHH
Confidence 111111111111122245678899999999999999999887 455666789999999999999999999999999999
Q ss_pred Hhhh
Q 024971 240 HTLS 243 (260)
Q Consensus 240 ~~l~ 243 (260)
+|++
T Consensus 267 ~Fl~ 270 (271)
T 3ia2_A 267 AFLK 270 (271)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9986
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-33 Score=201.53 Aligned_cols=220 Identities=18% Similarity=0.162 Sum_probs=140.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC-ccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl 83 (260)
+||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+++++ |++|+++|+
T Consensus 45 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl 117 (274)
T 1a8q_A 45 AGYRGIAHDRRGHGHSTPVW-------DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVL 117 (274)
T ss_dssp TTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEE
T ss_pred CCCeEEEEcCCCCCCCCCCC-------CCCcHHHHHHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeE
Confidence 47999999999999998654 4689999999999999999999999999999999999988776 999999999
Q ss_pred eccCccccccCC-CCC-CCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC---CCCcccHHHHHHHhccCCc
Q 024971 84 LNISLRMLHIKK-QPW-YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN---DTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 84 ~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 158 (260)
+++.+....... .+. ........+....... . ...........+. ............+......
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (274)
T 1a8q_A 118 LSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTE---R--------SQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMA 186 (274)
T ss_dssp ESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH---H--------HHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTT
T ss_pred ecCCCccccccccCcccchHHHHHHHHHHhhcc---H--------HHHHHHhcccccccccccccccHHHHHHHHHHhhh
Confidence 997542211000 000 0000011111000000 0 0001111111111 0111223333322221111
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH-HHHHhhccCCCccEEEeCCCCCCcchh--chhHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQVS--LYLSLS 235 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~--~p~~~~ 235 (260)
.. ..............+....++++++|+|+++|++|.++|.+ ..+.+.+..+++++++++++||+++.| +|++++
T Consensus 187 ~~-~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~ 265 (274)
T 1a8q_A 187 QT-IEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFN 265 (274)
T ss_dssp SC-HHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHH
T ss_pred cC-hHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceecccCCHHHHH
Confidence 11 11111111111112224567889999999999999999988 455666778999999999999999999 999999
Q ss_pred HHHHHhhh
Q 024971 236 SACLHTLS 243 (260)
Q Consensus 236 ~~i~~~l~ 243 (260)
+.|.+|++
T Consensus 266 ~~i~~fl~ 273 (274)
T 1a8q_A 266 RDLLEFLN 273 (274)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99999985
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=208.08 Aligned_cols=234 Identities=15% Similarity=0.130 Sum_probs=159.7
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
+++||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|
T Consensus 53 ~~~g~~v~~~d~~G~G~S~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 125 (309)
T 3u1t_A 53 VAAGYRAVAPDLIGMGDSAKPD-------IEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVA 125 (309)
T ss_dssp HHTTCEEEEECCTTSTTSCCCS-------SCCCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEE
T ss_pred HhCCCEEEEEccCCCCCCCCCC-------cccCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEE
Confidence 5689999999999999998865 478999999999999999999999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhh---hhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNL---LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++++.......... + .......... ......... ...........++... ........+....+.......
T Consensus 126 l~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 199 (309)
T 3u1t_A 126 FMEALVPPALPMPS-Y--EAMGPQLGPLFRDLRTADVGEK--MVLDGNFFVETILPEM-GVVRSLSEAEMAAYRAPFPTR 199 (309)
T ss_dssp EEEESCTTTCSBSC-S--GGGHHHHHHHHHHHTSTTHHHH--HHTTTCHHHHTHHHHT-SCSSCCCHHHHHHHHTTCCST
T ss_pred EeccCCCCcccccc-c--cccchhhhHHHHHHhccchhhh--hccccceehhhhcccc-cccccCCHHHHHHHHHhcCCc
Confidence 99987543211000 0 0111111111 111101100 0111112222222221 122334455555555444444
Q ss_pred chHHHHHHHHhhhCCC-----------CCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcch
Q 024971 160 GAADVFLEFICYSGGP-----------LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~-----------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 228 (260)
........+....... +....+.++++|+++|+|++|.++|.+..+.+.+..++.++++++++||+++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 279 (309)
T 3u1t_A 200 QSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGAGTHFLQE 279 (309)
T ss_dssp GGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHH
T ss_pred cccchHHHHHHHhccccccchhhhhhhhhhhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhCCCCEEEEecCCcccchh
Confidence 3333333332221111 01233567899999999999999999999999999999999999999999999
Q ss_pred hchhHHHHHHHHhhhhccccc
Q 024971 229 SLYLSLSSACLHTLSYLHTCR 249 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~~~~~~ 249 (260)
++|+++.+.|.+|++......
T Consensus 280 ~~p~~~~~~i~~fl~~~~~~~ 300 (309)
T 3u1t_A 280 DHPHLIGQGIADWLRRNKPHA 300 (309)
T ss_dssp HCHHHHHHHHHHHHHHHCCCC
T ss_pred hCHHHHHHHHHHHHHhcchhh
Confidence 999999999999998876554
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-34 Score=209.78 Aligned_cols=219 Identities=17% Similarity=0.153 Sum_probs=138.6
Q ss_pred CCC-ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 3 L~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
|++ ||+||++|+||||.|+.+.. ...++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++
T Consensus 70 L~~~g~rvia~Dl~G~G~S~~~~~-----~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~L 144 (310)
T 1b6g_A 70 FAESGARVIAPDFFGFGKSDKPVD-----EEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRL 144 (310)
T ss_dssp HHHTTCEEEEECCTTSTTSCEESC-----GGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEE
T ss_pred HHhCCCeEEEeCCCCCCCCCCCCC-----cCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEE
Confidence 444 59999999999999987541 146899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCC-----CCCCCcchhHHHhhhhh-hhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhcc
Q 024971 82 ILLNISLRMLHIKK-----QPWYGRPLIRSFQNLLR-NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (260)
Q Consensus 82 vl~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
|++++......... ................. ...... . ....... ....++....+...
T Consensus 145 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~~~~~~~---~~~~~~~~~~~~~~ 209 (310)
T 1b6g_A 145 IIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRL---------D---QFMKRWA---PTLTEAEASAYAAP 209 (310)
T ss_dssp EEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSCSSCCH---------H---HHHHHHS---TTCCHHHHHHHHTT
T ss_pred EEeccccccCCccccchhhhhhccchHHHHHHHHhccCchhhh---------h---hHHhhcC---CCCCHHHHHHHhcc
Confidence 99998542100000 00000000000000000 000000 0 0000000 01122222222221
Q ss_pred CCccch---HHHHHHHHhhhCC-------CCCCccCC-CCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEe--CCC
Q 024971 156 GLETGA---ADVFLEFICYSGG-------PLPEELLP-QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVL--PNV 222 (260)
Q Consensus 156 ~~~~~~---~~~~~~~~~~~~~-------~~~~~~~~-~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~--~~~ 222 (260)
...... ...+.... .... ....+.+. ++++|+|+|+|++|.+++ +..+.+.+.+|+++++++ +++
T Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~ip~~~~~~i~~~~~ 287 (310)
T 1b6g_A 210 FPDTSYQAGVRKFPKMV-AQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG-PDVMYPMKALINGCPEPLEIADA 287 (310)
T ss_dssp CSSGGGCHHHHHHHHHH-HSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTC
T ss_pred cCCccchHHHHHHHHHh-cccccchhhhhhhHhhhhhccccCceEEEeccCcchhh-hHHHHHHHhcccccceeeecCCc
Confidence 111100 00010000 0000 00123466 899999999999999999 888888888899988877 999
Q ss_pred CCCcchhchhHHHHHHHHhhhh
Q 024971 223 GHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 223 gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
||++++ +|+++++.|.+|++.
T Consensus 288 GH~~~~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 288 GHFVQE-FGEQVAREALKHFAE 308 (310)
T ss_dssp CSCGGG-GHHHHHHHHHHHHHH
T ss_pred ccchhh-ChHHHHHHHHHHHhc
Confidence 999999 999999999999974
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=201.64 Aligned_cols=219 Identities=16% Similarity=0.160 Sum_probs=136.4
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. .++++++++++.+. ++ ++++|+||||||.+|+.+|.++|++|+++
T Consensus 35 ~L~~~~~vi~~Dl~G~G~S~~~~--------~~~~~~~~~~l~~~---l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 102 (258)
T 1m33_A 35 ELSSHFTLHLVDLPGFGRSRGFG--------ALSLADMAEAVLQQ---AP-DKAIWLGWSLGGLVASQIALTHPERVRAL 102 (258)
T ss_dssp HHHTTSEEEEECCTTSTTCCSCC--------CCCHHHHHHHHHTT---SC-SSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HhhcCcEEEEeeCCCCCCCCCCC--------CcCHHHHHHHHHHH---hC-CCeEEEEECHHHHHHHHHHHHhhHhhceE
Confidence 35678999999999999998752 46888888776544 44 78999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHH---hccCCc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKI---LQPGLE 158 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 158 (260)
|++++.+....... +. ......+...... .... .......+........ .........+ ......
T Consensus 103 vl~~~~~~~~~~~~--~~-~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 170 (258)
T 1m33_A 103 VTVASSPCFSARDE--WP-GIKPDVLAGFQQQ------LSDD--QQRTVERFLALQTMGT-ETARQDARALKKTVLALPM 170 (258)
T ss_dssp EEESCCSCCBCBTT--BC-SBCHHHHHHHHHH------HHHH--HHHHHHHHHHTTSTTS-TTHHHHHHHHHHHHHTSCC
T ss_pred EEECCCCCcccccc--cc-CCCHHHHHHHHHH------Hhcc--HHHHHHHHHHHHhcCC-ccchhhHHHHHHHHHhccC
Confidence 99998643221111 11 0000000000000 0000 0001111111111000 1111111111 111111
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
. ....+..........+....+.++++|+++|+|++|.+++.+..+.+.+..+++++++++++||+++.|+|+++++.|
T Consensus 171 ~-~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 249 (258)
T 1m33_A 171 P-EVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLL 249 (258)
T ss_dssp C-CHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred C-cHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCccceEEEeCCCCCCccccCHHHHHHHH
Confidence 1 111111111111112234567889999999999999999999888888889999999999999999999999999999
Q ss_pred HHhhhhc
Q 024971 239 LHTLSYL 245 (260)
Q Consensus 239 ~~~l~~~ 245 (260)
.+|++.+
T Consensus 250 ~~fl~~~ 256 (258)
T 1m33_A 250 VALKQRV 256 (258)
T ss_dssp HHHHTTS
T ss_pred HHHHHhc
Confidence 9999765
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=206.53 Aligned_cols=223 Identities=16% Similarity=0.147 Sum_probs=141.4
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCcc-chhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl 83 (260)
+||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+|.++|+ +|+++|+
T Consensus 49 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl 121 (279)
T 1hkh_A 49 QGYRVITYDRRGFGGSSKVN-------TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAF 121 (279)
T ss_dssp TTEEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEE
T ss_pred CCcEEEEeCCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEE
Confidence 47999999999999998765 468999999999999999999999999999999999999999998 9999999
Q ss_pred eccCccccccCCC-CC-CCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 84 LNISLRMLHIKKQ-PW-YGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 84 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
+++.......... .. ........+........ ..... .....+.............+....+.........
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (279)
T 1hkh_A 122 LASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDR--FAWFT-----DFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAP 194 (279)
T ss_dssp ESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCH--HHHHH-----HHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCT
T ss_pred EccCCcccccCcCCcCCCcHHHHHHHHHHhhhhh--hhhHH-----HHHhhhhhcccCCcccccHHHHHhhhhhhccCcH
Confidence 9985432110000 00 00000111111000000 00000 0000111000000111222222222211111111
Q ss_pred HHHHHHHHhhhCCCCCCccCCCC---CCCEEEEecCCCCCCChHHH-HHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 162 ADVFLEFICYSGGPLPEELLPQV---KCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i---~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
..... ..... ..+....+.++ ++|+|+++|++|.++|.+.. +.+.+..+++++++++++||+++.|+|+++++.
T Consensus 195 ~~~~~-~~~~~-~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 272 (279)
T 1hkh_A 195 VAAYA-VVPAW-IEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAA 272 (279)
T ss_dssp THHHH-THHHH-TCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHH
T ss_pred HHHHH-HHHHH-hhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhCCCeeEEEeCCCCccchhcCHHHHHHH
Confidence 11111 11111 12223456677 99999999999999998877 788888999999999999999999999999999
Q ss_pred HHHhhh
Q 024971 238 CLHTLS 243 (260)
Q Consensus 238 i~~~l~ 243 (260)
|.+|++
T Consensus 273 i~~fl~ 278 (279)
T 1hkh_A 273 LKTFLA 278 (279)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999985
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-33 Score=199.81 Aligned_cols=204 Identities=24% Similarity=0.285 Sum_probs=135.7
Q ss_pred CCC-ccEEEEEcCCCCCCCCCCCCCCCCCCCCcc---HHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYT---FETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 3 L~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
|++ ||+|+++|+||||.|+.+. ..++ +++.++++.+++++++.++++++||||||.+|+.+|.++|++|
T Consensus 47 l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v 119 (254)
T 2ocg_A 47 LNKKLFTVVAWDPRGYGHSRPPD-------RDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYI 119 (254)
T ss_dssp SCTTTEEEEEECCTTSTTCCSSC-------CCCCTTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred HhhCCCeEEEECCCCCCCCCCCC-------CCCChHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHh
Confidence 444 6999999999999998654 2345 7888999999999999999999999999999999999999999
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++|++++...... ...... ........ ........+...+.. .........+
T Consensus 120 ~~lvl~~~~~~~~~---------~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~--~~~~~~~~~~------ 172 (254)
T 2ocg_A 120 HKMVIWGANAYVTD---------EDSMIY-EGIRDVSK---------WSERTRKPLEALYGY--DYFARTCEKW------ 172 (254)
T ss_dssp EEEEEESCCSBCCH---------HHHHHH-HTTSCGGG---------SCHHHHHHHHHHHCH--HHHHHHHHHH------
T ss_pred hheeEeccccccCh---------hhHHHH-HHHHHHHH---------HHHHhHHHHHHHhcc--hhhHHHHHHH------
Confidence 99999998642210 000000 00000000 000000000000000 0000000000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
...+...............++++++|+|+++|++|.++|.+..+.+.+.++++++++++++||+++.++|+++++.|
T Consensus 173 ---~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 249 (254)
T 2ocg_A 173 ---VDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLA 249 (254)
T ss_dssp ---HHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHH
T ss_pred ---HHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCCCEEEEcCCCCCchhhhCHHHHHHHH
Confidence 00000000000111124567889999999999999999999999999889999999999999999999999999999
Q ss_pred HHhhh
Q 024971 239 LHTLS 243 (260)
Q Consensus 239 ~~~l~ 243 (260)
.+|++
T Consensus 250 ~~fl~ 254 (254)
T 2ocg_A 250 EDFLQ 254 (254)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99984
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=209.47 Aligned_cols=228 Identities=16% Similarity=0.247 Sum_probs=140.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
.+|+|+++|+||||.|+...+.. ...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|.++|++
T Consensus 81 ~~~~Via~D~rG~G~S~~~~~~~---~~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~ 157 (330)
T 3nwo_A 81 TGRTVIHYDQVGCGNSTHLPDAP---ADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAIC 157 (330)
T ss_dssp HTCCEEEECCTTSTTSCCCTTSC---GGGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEE
T ss_pred cCcEEEEECCCCCCCCCCCCCCc---cccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEe
Confidence 58999999999999998633210 135799999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHH-----HhcChHH---HHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK-----MVATSES---VRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+++..... + ......+........ ...+.. ....+.. ...+..................+....
T Consensus 158 ~~~~~~~~-----~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (330)
T 3nwo_A 158 NSPASMRL-----W--SEAAGDLRAQLPAET-RAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQME 229 (330)
T ss_dssp SCCSBHHH-----H--HHHHHHHHHHSCHHH-HHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHH
T ss_pred cCCcchHH-----H--HHHHHHHHHhcCHHH-HHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhc
Confidence 98643210 0 000000000000000 000000 0000100 011111111111111111111110000
Q ss_pred CccchHHHHHHHHh--------hhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcch
Q 024971 157 LETGAADVFLEFIC--------YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 157 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 228 (260)
.. ...+..+.. .....+..+.+.+|++|+|+|+|++|.++| ...+.+.+.+|++++++++++||++++
T Consensus 230 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~ip~~~~~~i~~~gH~~~~ 305 (330)
T 3nwo_A 230 AE---PTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHIPDVRSHVFPGTSHCTHL 305 (330)
T ss_dssp HS---CHHHHHHTCSCSSSCCSGGGGCBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHCSSEEEEEETTCCTTHHH
T ss_pred cc---hhhhhcccCchhhhhhccccCCchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhCCCCcEEEeCCCCCchhh
Confidence 00 000000000 000112245678899999999999999876 456778888999999999999999999
Q ss_pred hchhHHHHHHHHhhhhccc
Q 024971 229 SLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~~~~ 247 (260)
|+|+++++.|.+||+....
T Consensus 306 e~p~~~~~~i~~FL~~~~~ 324 (330)
T 3nwo_A 306 EKPEEFRAVVAQFLHQHDL 324 (330)
T ss_dssp HSHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhccc
Confidence 9999999999999987543
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-33 Score=201.74 Aligned_cols=220 Identities=17% Similarity=0.184 Sum_probs=139.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC-ccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl 83 (260)
+||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+++++ |++|+++|+
T Consensus 47 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl 119 (275)
T 1a88_A 47 HGYRVIAHDRRGHGRSDQPS-------TGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVL 119 (275)
T ss_dssp TTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEE
T ss_pred CCceEEEEcCCcCCCCCCCC-------CCCCHHHHHHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEE
Confidence 47999999999999998654 4689999999999999999999999999999999999988776 999999999
Q ss_pred eccCccccccCCCCCCC--cchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHH-hccC---CCCcccHHHHHHHhccCC
Q 024971 84 LNISLRMLHIKKQPWYG--RPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILC-QCYN---DTSQVTEELVEKILQPGL 157 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~ 157 (260)
+++.............. ......+...... .....+..... ..+. ............+.....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (275)
T 1a88_A 120 VSAVPPVMVKSDTNPDGLPLEVFDEFRAALAA-----------NRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM 188 (275)
T ss_dssp ESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHH-----------CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH
T ss_pred ecCCCcccccCccCcccCCHHHHHHHHHHHhh-----------hHHHHHHhhhccccccccCcccccCHHHHHHHHHHhh
Confidence 99754321100000000 0000000000000 00011111111 1111 011122233222221111
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH-HHHHhhccCCCccEEEeCCCCCCcchhchhHHHH
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
... ..............+....+.++++|+|+++|++|.++|.+ ..+.+.+..+++++++++++||+++.|+|+++++
T Consensus 189 ~~~-~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 267 (275)
T 1a88_A 189 MGA-ANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNP 267 (275)
T ss_dssp HSC-HHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHH
T ss_pred hcc-hHhHHHHHhhhhhcccccccccCCCCEEEEecCCCccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHH
Confidence 111 11111111111112223456788999999999999999887 4555667788999999999999999999999999
Q ss_pred HHHHhhh
Q 024971 237 ACLHTLS 243 (260)
Q Consensus 237 ~i~~~l~ 243 (260)
.|.+|++
T Consensus 268 ~i~~fl~ 274 (275)
T 1a88_A 268 DLLAFVK 274 (275)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999985
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=200.28 Aligned_cols=222 Identities=17% Similarity=0.154 Sum_probs=139.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC-ccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl 83 (260)
+||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+++++ |++|+++|+
T Consensus 45 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl 117 (273)
T 1a8s_A 45 QGYRVIAHDRRGHGRSSQPW-------SGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGL 117 (273)
T ss_dssp TTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEE
T ss_pred CCcEEEEECCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEE
Confidence 47999999999999998654 4689999999999999999999999999999999999987776 999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHH-hccC---CCCcccHHHHHHHhccCCcc
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILC-QCYN---DTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~ 159 (260)
+++.......... .........+...... ... ........... ..+. ............+.......
T Consensus 118 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (273)
T 1a8s_A 118 ISAVPPLMLKTEA-NPGGLPMEVFDGIRQA------SLA--DRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAA 188 (273)
T ss_dssp ESCCCSCCBCCSS-CTTSBCHHHHHHHHHH------HHH--HHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHS
T ss_pred EcccCcccccCcc-ccccCcHHHHHHHHHH------hHh--hHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhcccc
Confidence 9975432110000 0000000001000000 000 00011111111 1111 01112223222222111111
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH-HHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
.. .............+....+.++++|+|+++|++|.++|.+ ..+.+.+..+++++++++++||+++.++|+++++.|
T Consensus 189 ~~-~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 267 (273)
T 1a8s_A 189 GH-KNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADL 267 (273)
T ss_dssp CH-HHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHH
T ss_pred ch-hHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCccCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhCHHHHHHHH
Confidence 11 1111111111112224457789999999999999999987 455667778899999999999999999999999999
Q ss_pred HHhhh
Q 024971 239 LHTLS 243 (260)
Q Consensus 239 ~~~l~ 243 (260)
.+|++
T Consensus 268 ~~fl~ 272 (273)
T 1a8s_A 268 LAFIK 272 (273)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99985
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=205.87 Aligned_cols=213 Identities=20% Similarity=0.231 Sum_probs=134.9
Q ss_pred CCC-ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 3 L~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
|++ ||+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++
T Consensus 69 L~~~g~rvia~Dl~G~G~S~~~~~-----~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~l 143 (297)
T 2xt0_A 69 FTAAGGRVVAPDLFGFGRSDKPTD-----DAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRL 143 (297)
T ss_dssp HHHTTCEEEEECCTTSTTSCEESC-----GGGCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEE
T ss_pred HHhCCcEEEEeCCCCCCCCCCCCC-----cccCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEE
Confidence 443 69999999999999987541 136899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhh-hhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN-TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
|++++.... . . ........+...... ..... ...+.... .....+....+........
T Consensus 144 vl~~~~~~~---~--~-~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 202 (297)
T 2xt0_A 144 IVMNTALAV---G--L-SPGKGFESWRDFVANSPDLDV------------GKLMQRAI---PGITDAEVAAYDAPFPGPE 202 (297)
T ss_dssp EEESCCCCS---S--S-CSCHHHHHHHHHHHTCTTCCH------------HHHHHHHS---TTCCHHHHHHHHTTCSSGG
T ss_pred EEECCCCCc---c--c-CCchhHHHHHHHhhcccccch------------hHHHhccC---ccCCHHHHHHHhccccCcc
Confidence 999985411 0 0 000000001110000 00000 00000000 0111122222211111100
Q ss_pred hHHHHHHHHhhhCC----------CCCCccCC-CCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEE--eCCCCCCcc
Q 024971 161 AADVFLEFICYSGG----------PLPEELLP-QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIV--LPNVGHCPQ 227 (260)
Q Consensus 161 ~~~~~~~~~~~~~~----------~~~~~~~~-~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~--~~~~gH~~~ 227 (260)
.......+...... ....+.+. ++++|+|+|+|++|.+++ +..+.+.+.+|++++++ ++++||+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~~p~~~~~~~~~~~~GH~~~ 281 (297)
T 2xt0_A 203 FKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEVMGMLRQAIRGCPEPMIVEAGGHFVQ 281 (297)
T ss_dssp GCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSSGG
T ss_pred hhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHHHHHHHhCCCCeeEEeccCCCCcCcc
Confidence 00000000000000 00023456 889999999999999999 77888888888887654 789999999
Q ss_pred hhchhHHHHHHHHhhh
Q 024971 228 VSLYLSLSSACLHTLS 243 (260)
Q Consensus 228 ~~~p~~~~~~i~~~l~ 243 (260)
+ +|+++++.|.+|++
T Consensus 282 ~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 282 E-HGEPIARAALAAFG 296 (297)
T ss_dssp G-GCHHHHHHHHHHTT
T ss_pred c-CHHHHHHHHHHHHh
Confidence 9 99999999999985
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=207.52 Aligned_cols=237 Identities=17% Similarity=0.097 Sum_probs=144.7
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
|++||+|+++|+||||.|+.+..... ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|
T Consensus 56 l~~~~~v~~~D~~G~G~S~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 133 (306)
T 3r40_A 56 LAERFKVIVADLPGYGWSDMPESDEQ--HTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLA 133 (306)
T ss_dssp HHTTSEEEEECCTTSTTSCCCCCCTT--CGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred hccCCeEEEeCCCCCCCCCCCCCCcc--cCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEE
Confidence 56699999999999999988762100 0268999999999999999999999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHh---hhhhhhhhHHHHHHHhcChHHHHHHHHhccCC--CCcccHHHHHHHhccCC
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQ---NLLRNTAAGKLFYKMVATSESVRNILCQCYND--TSQVTEELVEKILQPGL 157 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 157 (260)
++++.+......... ........ ........... .........+...+...... ......+..+.+.....
T Consensus 134 l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (306)
T 3r40_A 134 VLDILPTYEYWQRMN---RAYALKIYHWSFLAQPAPLPEN-LLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFA 209 (306)
T ss_dssp EESCCCHHHHHHHCS---HHHHHHSTHHHHHTSCTTHHHH-HHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHT
T ss_pred EecCCCCccchhhhh---hhhhhhhHHHHHhhcccchHHH-HHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHc
Confidence 999864321100000 00000000 00000000000 00001112233333333322 33344444444433222
Q ss_pred ccchHHHHHHHHhhhCCCCC------CccCCCCCCCEEEEecCCCCCCC-hHHHHHhhccCCCccEEEeCCCCCCcchhc
Q 024971 158 ETGAADVFLEFICYSGGPLP------EELLPQVKCPVLIAWGDKDPWEP-IELGRAYGNFDSVEDFIVLPNVGHCPQVSL 230 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 230 (260)
...........+........ ...+.++++|+++|+|++|.+++ ....+.+.+..++++++++ ++||+++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~ 288 (306)
T 3r40_A 210 DPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEA 288 (306)
T ss_dssp SHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHS
T ss_pred cCCCcchhhHHHHhcccccchhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhC
Confidence 22222222221111100000 11468899999999999999998 5566667777889999999 6899999999
Q ss_pred hhHHHHHHHHhhhhcc
Q 024971 231 YLSLSSACLHTLSYLH 246 (260)
Q Consensus 231 p~~~~~~i~~~l~~~~ 246 (260)
|+++++.|.+|++...
T Consensus 289 p~~~~~~i~~fl~~~~ 304 (306)
T 3r40_A 289 PDQTAEALVRFFSAAP 304 (306)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHHHhcc
Confidence 9999999999998653
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-32 Score=195.57 Aligned_cols=219 Identities=14% Similarity=0.122 Sum_probs=136.2
Q ss_pred CC-CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 3 L~-~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
|+ +||+|+++|+||||.|+.+. ...++++++++|+.+++++++ .++++|+||||||.+++.+|.++|++|++
T Consensus 26 L~~~g~~via~Dl~G~G~S~~~~------~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~ 99 (257)
T 3c6x_A 26 LEALGHKVTALDLAASGVDPRQI------EEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAA 99 (257)
T ss_dssp HHHTTCEEEEECCTTSTTCSCCG------GGCCSHHHHTHHHHHHHHTSCTTCCEEEEEEETHHHHHHHHHHHHGGGEEE
T ss_pred HHhCCCEEEEeCCCCCCCCCCCc------ccccCHHHHHHHHHHHHHhccccCCeEEEEECcchHHHHHHHHhCchhhhe
Confidence 53 58999999999999997643 245899999999999999995 58999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHH--H--------HHhcChHHHHHHHHhccCCCCcccHHHHH
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF--Y--------KMVATSESVRNILCQCYNDTSQVTEELVE 150 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (260)
+|++++....... ........+....... ..... . .....+..... ..+............
T Consensus 100 lVl~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 170 (257)
T 3c6x_A 100 AVFHNSVLPDTEH-----CPSYVVDKLMEVFPDW-KDTTYFTYTKDGKEITGLKLGFTLLRE---NLYTLCGPEEYELAK 170 (257)
T ss_dssp EEEEEECCCCSSS-----CTTHHHHHHHHHSCCC-TTCEEEEEEETTEEEEEEECCHHHHHH---HTSTTSCHHHHHHHH
T ss_pred EEEEecccCCCCC-----cchhHHHHHhhcCcch-hhhhhhhccCCCCccccccccHHHHHH---HHhcCCCHHHHHHHH
Confidence 9999985321100 0000000000000000 00000 0 00000000000 001111000001111
Q ss_pred HHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhc
Q 024971 151 KILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSL 230 (260)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 230 (260)
...... ...... +.. . .......+ .++|+++|+|++|.++|++..+.+.+.+|++++++++++||++++|+
T Consensus 171 ~~~~~~--~~~~~~---~~~-~-~~~~~~~~--~~~P~l~i~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 241 (257)
T 3c6x_A 171 MLTRKG--SLFQNI---LAK-R-PFFTKEGY--GSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTK 241 (257)
T ss_dssp HHCCCB--CCCHHH---HHH-S-CCCCTTTG--GGSCEEEEECTTCSSSCHHHHHHHHHHSCCSEEEECCSCCSCHHHHS
T ss_pred HhcCCC--ccchhh---hcc-c-cccChhhc--CcccEEEEEeCCCcccCHHHHHHHHHHCCCCeEEEeCCCCCCcccCC
Confidence 111100 000000 000 0 01101111 26899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhhhhc
Q 024971 231 YLSLSSACLHTLSYL 245 (260)
Q Consensus 231 p~~~~~~i~~~l~~~ 245 (260)
|+++++.|.+|++..
T Consensus 242 P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 242 TKEIAEILQEVADTY 256 (257)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999753
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-33 Score=203.50 Aligned_cols=231 Identities=20% Similarity=0.224 Sum_probs=155.7
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 54 ~l~~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~l 126 (299)
T 3g9x_A 54 HVAPSHRCIAPDLIGMGKSDKPD-------LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 126 (299)
T ss_dssp HHTTTSCEEEECCTTSTTSCCCC-------CCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEE
T ss_pred HHccCCEEEeeCCCCCCCCCCCC-------CcccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEE
Confidence 36789999999999999998876 46899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++.......... ..........+.......... ............... ...........+.........
T Consensus 127 vl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 198 (299)
T 3g9x_A 127 ACMEFIRPFPTWDEW----PEFARETFQAFRTADVGRELI--IDQNAFIEGALPKCV--VRPLTEVEMDHYREPFLKPVD 198 (299)
T ss_dssp EEEEECCCBSSGGGS----CGGGHHHHHHHTSSSHHHHHH--TTSCHHHHTHHHHTC--SSCCCHHHHHHHHGGGSSGGG
T ss_pred EEecCCcchhhhhhc----chHHHHHHHHHcCCCcchhhh--ccchhhHHHhhhhhh--ccCCCHHHHHHHHHHhccccc
Confidence 999965433211110 111111111111111111110 011112222222211 122333444444433333333
Q ss_pred HHHHHHHHhhhCCC-----------CCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhc
Q 024971 162 ADVFLEFICYSGGP-----------LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSL 230 (260)
Q Consensus 162 ~~~~~~~~~~~~~~-----------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 230 (260)
......+....... .....+.++++|+++++|++|.+++.+..+.+.+.++++++++++++||+++.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 278 (299)
T 3g9x_A 199 REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDN 278 (299)
T ss_dssp GHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHHHC
T ss_pred cchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhCCCCeEEEeCCCCCcchhcC
Confidence 33322222211110 0122356789999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhhhhccc
Q 024971 231 YLSLSSACLHTLSYLHT 247 (260)
Q Consensus 231 p~~~~~~i~~~l~~~~~ 247 (260)
|+++++.|.+++....+
T Consensus 279 p~~~~~~i~~~~~~~~~ 295 (299)
T 3g9x_A 279 PDLIGSEIARWLPALHH 295 (299)
T ss_dssp HHHHHHHHHHHSGGGCC
T ss_pred HHHHHHHHHHHHhhhhh
Confidence 99999999999876644
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=200.12 Aligned_cols=225 Identities=18% Similarity=0.165 Sum_probs=148.1
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++||+|+++|+||||.|+...... ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 42 ~l~~g~~v~~~D~~G~G~S~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~l 118 (269)
T 4dnp_A 42 FFLRDYRVVLYDLVCAGSVNPDFFDF---RRYTTLDPYVDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKL 118 (269)
T ss_dssp GGTTTCEEEEECCTTSTTSCGGGCCT---TTCSSSHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred HHhCCcEEEEEcCCCCCCCCCCCCCc---cccCcHHHHHHHHHHHHHhcCCCeEEEEccCHHHHHHHHHHHhCcHhhcee
Confidence 46779999999999999996621100 245599999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChH-HHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSE-SVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
|++++.+......... .......+....... ..... ....+........ ..+....+........
T Consensus 119 vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 184 (269)
T 4dnp_A 119 ILIGASPRFLNDEDYH--GGFEQGEIEKVFSAM---------EANYEAWVNGFAPLAVGAD---VPAAVREFSRTLFNMR 184 (269)
T ss_dssp EEESCCSCCBCBTTBC--CSBCHHHHHHHHHHH---------HHCHHHHHHHHHHHHHCSS---CHHHHHHHHHHHHHSC
T ss_pred EEeCCCCCCCChHHhc--cccchHHHHHHHHhc---------cccHHHHHHHhhhhhccCC---ChhHHHHHHHHHHccC
Confidence 9999975433221111 111111111111000 00011 1111111111111 1111111111111111
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
..............+....+.++++|+++++|++|.+++.+..+.+.+.+++ +++++++++||+++.++|+++++.|.
T Consensus 185 -~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 263 (269)
T 4dnp_A 185 -PDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELR 263 (269)
T ss_dssp -HHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSSCEEEEEEEEESSCHHHHCHHHHHHHHH
T ss_pred -cchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCCCceEEEeCCCCCCccccCHHHHHHHHH
Confidence 1122222222223344567888999999999999999999999999998888 79999999999999999999999999
Q ss_pred Hhhhh
Q 024971 240 HTLSY 244 (260)
Q Consensus 240 ~~l~~ 244 (260)
+|++.
T Consensus 264 ~fl~~ 268 (269)
T 4dnp_A 264 RALSH 268 (269)
T ss_dssp HHHC-
T ss_pred HHHhh
Confidence 99864
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=198.48 Aligned_cols=221 Identities=14% Similarity=0.078 Sum_probs=143.8
Q ss_pred CCCC--ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh-hcCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 2 VLAK--SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 2 ~L~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.|++ ||+|+++|+||||.|+.+. . ++++++++|+.+++++ ++.++++++||||||.+++.+|.++|++|
T Consensus 43 ~l~~~~g~~v~~~d~~G~G~s~~~~-------~-~~~~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 114 (272)
T 3fsg_A 43 PLSNVGQYQRIYLDLPGMGNSDPIS-------P-STSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQT 114 (272)
T ss_dssp TSTTSTTSEEEEECCTTSTTCCCCS-------S-CSHHHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGE
T ss_pred HHhccCceEEEEecCCCCCCCCCCC-------C-CCHHHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhh
Confidence 3555 9999999999999998876 3 8999999999999999 78899999999999999999999999999
Q ss_pred hhceEeccCccccccCCCC-CCCcchhHHHhhhhhhhhhHHHHHHHh--cChHHHHHHHHhccCCCCcccHHHHHHHhcc
Q 024971 79 RGMILLNISLRMLHIKKQP-WYGRPLIRSFQNLLRNTAAGKLFYKMV--ATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
+++|+++|........... .........+...+..... ..+.... ........+..................+..
T Consensus 115 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 192 (272)
T 3fsg_A 115 LGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYF-ADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQN- 192 (272)
T ss_dssp EEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGH-HHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTT-
T ss_pred heeEEECcccccCccccccccchhhhhhhhhcccCHHHH-HHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhh-
Confidence 9999999886432211100 0000000000000000000 0000000 001111111000000000000111111100
Q ss_pred CCccchHHHHHHHHhhhCC-CCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHH
Q 024971 156 GLETGAADVFLEFICYSGG-PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
.... ......+.++++|+++++|++|.++|.+..+.+.+.++++++++++++||+++.++|+++
T Consensus 193 ---------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 257 (272)
T 3fsg_A 193 ---------------NYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENGEIVLLNRTGHNLMIDQREAV 257 (272)
T ss_dssp ---------------SCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCTTEEEEEESSCCSSHHHHTHHHH
T ss_pred ---------------hcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcCCCeEEEecCCCCCchhcCHHHH
Confidence 0000 000124578899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhccc
Q 024971 235 SSACLHTLSYLHT 247 (260)
Q Consensus 235 ~~~i~~~l~~~~~ 247 (260)
.+.|.+|++.+.+
T Consensus 258 ~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 258 GFHFDLFLDELNS 270 (272)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhc
Confidence 9999999987643
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-32 Score=201.05 Aligned_cols=229 Identities=13% Similarity=0.082 Sum_probs=140.8
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+.+. ...++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|++
T Consensus 65 ~L~~~~~via~Dl~GhG~S~~~~------~~~~~~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~ 138 (318)
T 2psd_A 65 HIEPVARCIIPDLIGMGKSGKSG------NGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKA 138 (318)
T ss_dssp GTTTTSEEEEECCTTSTTCCCCT------TSCCSHHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEE
T ss_pred HhhhcCeEEEEeCCCCCCCCCCC------CCccCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhe
Confidence 47788999999999999998764 2458999999999999999999 8999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc-
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET- 159 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (260)
+|++++...+.... ..+ .... ..+.. +.... .... ................ ......+....+.......
T Consensus 139 lvl~~~~~~~~~~~-~~~-~~~~-~~~~~-~~~~~-~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 209 (318)
T 2psd_A 139 IVHMESVVDVIESW-DEW-PDIE-EDIAL-IKSEE-GEKM--VLENNFFVETVLPSKI--MRKLEPEEFAAYLEPFKEKG 209 (318)
T ss_dssp EEEEEECCSCBSCC-TTS-CSCH-HHHHH-HHSTH-HHHH--HTTTCHHHHTHHHHTC--SSCCCHHHHHHHHGGGCSSS
T ss_pred EEEeccccCCccch-hhh-hhHH-HHHHH-Hhccc-chhh--hhcchHHHHhhccccc--cccCCHHHHHHHHHhhcCcc
Confidence 99998653221000 000 0000 11111 00000 0000 0000011111111110 0111222222222211111
Q ss_pred chHHHHHHHHhhhCC------------CCCCccCCCC-CCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCc
Q 024971 160 GAADVFLEFICYSGG------------PLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~------------~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 226 (260)
........+...... ......+.++ ++|+|+|+|++| +++. ..+.+.+.+++++++++ ++||++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~~~~~~~~i-~~gH~~ 286 (318)
T 2psd_A 210 EVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPG-FFSN-AIVEGAKKFPNTEFVKV-KGLHFL 286 (318)
T ss_dssp GGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEEEC-SSHH-HHHHHHTTSSSEEEEEE-EESSSG
T ss_pred ccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeEEEEeccc-cCcH-HHHHHHHhCCCcEEEEe-cCCCCC
Confidence 000000000000000 0001234567 899999999999 8887 78888888999999999 689999
Q ss_pred chhchhHHHHHHHHhhhhcccc
Q 024971 227 QVSLYLSLSSACLHTLSYLHTC 248 (260)
Q Consensus 227 ~~~~p~~~~~~i~~~l~~~~~~ 248 (260)
++|+|+++++.|.+|++.....
T Consensus 287 ~~e~p~~~~~~i~~fl~~~~~~ 308 (318)
T 2psd_A 287 QEDAPDEMGKYIKSFVERVLKN 308 (318)
T ss_dssp GGTCHHHHHHHHHHHHHHHHC-
T ss_pred HhhCHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999866443
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-32 Score=196.46 Aligned_cols=221 Identities=13% Similarity=0.090 Sum_probs=137.0
Q ss_pred CC-CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 3 L~-~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
|+ +||+|+++|+||||.|+.+. ...++++++++|+.+++++++ .++++|+||||||.+++.+|.++|++|++
T Consensus 27 L~~~g~rVia~Dl~G~G~S~~~~------~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~P~~v~~ 100 (273)
T 1xkl_A 27 LEAAGHKVTALDLAASGTDLRKI------EELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYA 100 (273)
T ss_dssp HHHTTCEEEECCCTTSTTCCCCG------GGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEE
T ss_pred HHhCCCEEEEecCCCCCCCccCc------ccccCHHHHHHHHHHHHHHhccCCCEEEEecCHHHHHHHHHHHhChHhheE
Confidence 53 58999999999999997654 245799999999999999997 58999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHH-HH--H--------HHhcChHHHHHHHHhccCCCCccc-HHH
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK-LF--Y--------KMVATSESVRNILCQCYNDTSQVT-EEL 148 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 148 (260)
+|++++....... ........+........... .. . ........ +........... ...
T Consensus 101 lvl~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 171 (273)
T 1xkl_A 101 AVFLAAFMPDSVH-----NSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKF----LAHKLYQLCSPEDLAL 171 (273)
T ss_dssp EEEESCCCCCSSS-----CTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHH----HHHHTSTTSCHHHHHH
T ss_pred EEEEeccCCCCCC-----cHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHH----HHHHhhccCCHHHHHH
Confidence 9999975321100 00000001100000000000 00 0 00000000 000010000000 001
Q ss_pred HHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcch
Q 024971 149 VEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 228 (260)
........ ...... +.. .... ......++|+++|+|++|.++|++..+.+.+.+|++++++++++||++++
T Consensus 172 ~~~~~~~~--~~~~~~---~~~--~~~~--~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~~~~~~i~~aGH~~~~ 242 (273)
T 1xkl_A 172 ASSLVRPS--SLFMED---LSK--AKYF--TDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAML 242 (273)
T ss_dssp HHHHCCCB--CCCHHH---HHH--CCCC--CTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCCSEEEEETTCCSCHHH
T ss_pred HHHhcCCC--chhhhh---hhc--cccc--chhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCCCCeEEEeCCCCCCchh
Confidence 11111110 000000 000 0000 01112469999999999999999999999888899999999999999999
Q ss_pred hchhHHHHHHHHhhhhccc
Q 024971 229 SLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~~~~ 247 (260)
|+|+++++.|.+|++....
T Consensus 243 e~P~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 243 CEPQKLCASLLEIAHKYNM 261 (273)
T ss_dssp HSHHHHHHHHHHHHHHCC-
T ss_pred cCHHHHHHHHHHHHHHhcc
Confidence 9999999999999986543
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-31 Score=196.24 Aligned_cols=222 Identities=14% Similarity=0.111 Sum_probs=138.8
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-cCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
++||+|+++|+||||.|+.+. ...++++++++|+.++++++ +.++++|+||||||.+|+.+|.++|++|+++|
T Consensus 53 ~~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 126 (293)
T 1mtz_A 53 KEGITVLFYDQFGCGRSEEPD------QSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLI 126 (293)
T ss_dssp GGTEEEEEECCTTSTTSCCCC------GGGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEE
T ss_pred hcCcEEEEecCCCCccCCCCC------CCcccHHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEE
Confidence 457999999999999998754 13579999999999999999 99999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHH----hcChHHH----HHHHHhccCCCCcccHHHHHHHhc
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM----VATSESV----RNILCQCYNDTSQVTEELVEKILQ 154 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
++++...... +. . ....+....... ....+... ....... ..+..................+..
T Consensus 127 l~~~~~~~~~-----~~-~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (293)
T 1mtz_A 127 VSGGLSSVPL-----TV-K-EMNRLIDELPAK-YRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEY 198 (293)
T ss_dssp EESCCSBHHH-----HH-H-HHHHHHHTSCHH-HHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHH
T ss_pred ecCCccChHH-----HH-H-HHHHHHHhcCHH-HHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhh
Confidence 9998653210 00 0 000000000000 00000000 0000000 111111110000111111111000
Q ss_pred cCCccchHHHHHHHHh--------hhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCc
Q 024971 155 PGLETGAADVFLEFIC--------YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 226 (260)
.... ..+..... .....+....+.++++|+|+++|++| .++++..+.+.+.+|++++++++++||++
T Consensus 199 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 273 (293)
T 1mtz_A 199 AERR----NVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYD-EVTPNVARVIHEKIAGSELHVFRDCSHLT 273 (293)
T ss_dssp HHHS----SHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTC-SSCHHHHHHHHHHSTTCEEEEETTCCSCH
T ss_pred hccc----hhhhhccCcceecccccccCCChhhhhccCCCCEEEEeeCCC-CCCHHHHHHHHHhCCCceEEEeCCCCCCc
Confidence 0000 00000000 00111224466788999999999999 67778888888889999999999999999
Q ss_pred chhchhHHHHHHHHhhhh
Q 024971 227 QVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 227 ~~~~p~~~~~~i~~~l~~ 244 (260)
+.|+|+++++.|.+|++.
T Consensus 274 ~~e~p~~~~~~i~~fl~~ 291 (293)
T 1mtz_A 274 MWEDREGYNKLLSDFILK 291 (293)
T ss_dssp HHHSHHHHHHHHHHHHHT
T ss_pred cccCHHHHHHHHHHHHHh
Confidence 999999999999999964
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-32 Score=196.04 Aligned_cols=221 Identities=12% Similarity=0.097 Sum_probs=134.1
Q ss_pred C-CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 3 L-AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 3 L-~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
| ++||+|+++|+||||.|+.+. ...++++++++|+.+++++++ .++++|+||||||.+++.+|.++|++|++
T Consensus 33 L~~~g~~via~Dl~G~G~S~~~~------~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~ 106 (264)
T 2wfl_A 33 LESAGHKVTAVDLSAAGINPRRL------DEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISV 106 (264)
T ss_dssp HHHTTCEEEEECCTTSTTCSCCG------GGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHCGGGEEE
T ss_pred HHhCCCEEEEeecCCCCCCCCCc------ccccCHHHHHHHHHHHHHHhCCCCCeEEEEeChHHHHHHHHHHhChhhhce
Confidence 5 368999999999999997644 245799999999999999996 58999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHh----cC---hHHHHHHHHhccCCCCccc-HHHHHHH
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMV----AT---SESVRNILCQCYNDTSQVT-EELVEKI 152 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~ 152 (260)
+|++++....... ........+................. .. .......+........... .......
T Consensus 107 lvl~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (264)
T 2wfl_A 107 AVFMSAMMPDPNH-----SLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKML 181 (264)
T ss_dssp EEEESSCCCCTTS-----CTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHH
T ss_pred eEEEeeccCCCCc-----chhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhc
Confidence 9999975311100 00000001100000000000000000 00 0000000000000000000 0000011
Q ss_pred hccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchh
Q 024971 153 LQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~ 232 (260)
.... ..... .+ ..... .......++|+++|+|++|.++|.+..+.+.+.+|++++++++++||++++|+|+
T Consensus 182 ~~~~--~~~~~---~~---~~~~~-~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~P~ 252 (264)
T 2wfl_A 182 TRPG--SLFFQ---DL---AKAKK-FSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGMLSQPR 252 (264)
T ss_dssp CCCE--ECCHH---HH---TTSCC-CCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHCCSEEEEETTCCSCHHHHSHH
T ss_pred cCCC--ccccc---cc---ccccc-cChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCCCceEEEeCCCCCchhhcCHH
Confidence 0000 00000 00 00001 0001123689999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHhhh
Q 024971 233 SLSSACLHTLS 243 (260)
Q Consensus 233 ~~~~~i~~~l~ 243 (260)
++++.|.+|++
T Consensus 253 ~~~~~l~~f~~ 263 (264)
T 2wfl_A 253 EVCKCLLDISD 263 (264)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999999975
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=201.21 Aligned_cols=224 Identities=14% Similarity=0.104 Sum_probs=138.6
Q ss_pred CCC-ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 3 LAK-SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 3 L~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
|++ ||+|+++|+||||.|+...+. ...++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++
T Consensus 47 L~~~G~~vi~~D~rG~G~S~~~~~~----~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 122 (298)
T 1q0r_A 47 LADGGLHVIRYDHRDTGRSTTRDFA----AHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSL 122 (298)
T ss_dssp HHTTTCEEEEECCTTSTTSCCCCTT----TSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHhCCCEEEeeCCCCCCCCCCCCCC----cCCcCHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhhee
Confidence 444 699999999999999872110 246899999999999999999999999999999999999999999999999
Q ss_pred eEeccCcccc-cc---------CCCC-CCCcchhHHHhhhhhhhhhHHHHHHHhcChHH-HHHHH---HhccCCCCcccH
Q 024971 82 ILLNISLRML-HI---------KKQP-WYGRPLIRSFQNLLRNTAAGKLFYKMVATSES-VRNIL---CQCYNDTSQVTE 146 (260)
Q Consensus 82 vl~~~~~~~~-~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~ 146 (260)
|++++..... .. .... .........+......... ...... ..... ............
T Consensus 123 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (298)
T 1q0r_A 123 TMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQP-------AEGRAAEVAKRVSKWRILSGTGVPFDD 195 (298)
T ss_dssp EEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSC-------CCSHHHHHHHHHHHHHHHHCSSSCCCH
T ss_pred EEecccCCCcccccchhhhhhhhhhhcccccccHHHHHHHhccCcc-------cccHHHHHHHHHHhhhhccCCCCCCCH
Confidence 9999865110 00 0000 0000001111111000000 000000 00000 000000111112
Q ss_pred HHHHHH----hccC-Cccch-HHHHHHHHhhhCCCCCCcc-CCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEe
Q 024971 147 ELVEKI----LQPG-LETGA-ADVFLEFICYSGGPLPEEL-LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVL 219 (260)
Q Consensus 147 ~~~~~~----~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~-~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
+....+ .... ..... ...+ ......+.... ++++++|+|+|+|++|.++|++..+.+.+.+|+++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i 271 (298)
T 1q0r_A 196 AEYARWEERAIDHAGGVLAEPYAHY----SLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEI 271 (298)
T ss_dssp HHHHHHHHHHHHHTTTCCSCCCGGG----GCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEE
T ss_pred HHHHHHHHHHhhccCCccchhhhhh----hhhcCcccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhCCCCEEEEc
Confidence 111111 1100 00000 0000 00111122345 788999999999999999999999999999999999999
Q ss_pred CCCCCCcchhchhHHHHHHHHhhhhc
Q 024971 220 PNVGHCPQVSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 220 ~~~gH~~~~~~p~~~~~~i~~~l~~~ 245 (260)
+++|| +.|+++++.|.+|++..
T Consensus 272 ~~~gH----e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 272 PGMGH----ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp TTCCS----SCCGGGHHHHHHHHHHH
T ss_pred CCCCC----CCcHHHHHHHHHHHHHH
Confidence 99999 78999999999999754
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=200.70 Aligned_cols=215 Identities=13% Similarity=0.120 Sum_probs=133.9
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC-ccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~ 80 (260)
.|+++|+||++|+||||.|+.+. ..++++++++|+.++++++++++++|+||||||.+|+.+|.++ |++|++
T Consensus 49 ~L~~~~rvia~DlrGhG~S~~~~-------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~ 121 (276)
T 2wj6_A 49 ELDADFRVIVPNWRGHGLSPSEV-------PDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPR 121 (276)
T ss_dssp HHTTTSCEEEECCTTCSSSCCCC-------CCCCHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCC
T ss_pred HHhcCCEEEEeCCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhce
Confidence 46789999999999999998754 4689999999999999999999999999999999999999999 999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|++++..... .......+........... .....+....... ......+.+........
T Consensus 122 lvl~~~~~~~~--------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 181 (276)
T 2wj6_A 122 GIIMDWLMWAP--------KPDFAKSLTLLKDPERWRE----------GTHGLFDVWLDGH--DEKRVRHHLLEEMADYG 181 (276)
T ss_dssp EEEESCCCSSC--------CHHHHHHHHHHHCTTTHHH----------HHHHHHHHHHTTB--CCHHHHHHHHTTTTTCC
T ss_pred EEEecccccCC--------CchHHHHhhhccCcchHHH----------HHHHHHHHhhccc--chHHHHHHHHHHhhhcc
Confidence 99998753110 0000111100000000000 0000000000000 01111111111111100
Q ss_pred h------HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCC--hHHHHHhhccCCCccEEEeCCCCCCcchhchh
Q 024971 161 A------ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP--IELGRAYGNFDSVEDFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 161 ~------~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~ 232 (260)
. ........... ......+.++++|+++++|..+...+ ....+.+.+.+|++++++++++||++++|+|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~e~P~ 259 (276)
T 2wj6_A 182 YDCWGRSGRVIEDAYGRN--GSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPD 259 (276)
T ss_dssp HHHHHHHHHHHHHHHHHH--CCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHSHH
T ss_pred hhhhhhccchhHHHHhhc--cchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhCCCeEEEEeCCCCCcccccCHH
Confidence 0 00000110000 01123466788999988764333222 23445677779999999999999999999999
Q ss_pred HHHHHHHHhhhhc
Q 024971 233 SLSSACLHTLSYL 245 (260)
Q Consensus 233 ~~~~~i~~~l~~~ 245 (260)
++++.|.+|++..
T Consensus 260 ~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 260 RAAVHIREFATAI 272 (276)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999754
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=200.54 Aligned_cols=235 Identities=17% Similarity=0.191 Sum_probs=141.7
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+.... ....++.+.+++|+.++++.++.++++++||||||.+|+.+|.++|++|+++
T Consensus 47 ~l~~~~~vi~~Dl~G~G~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~l 124 (291)
T 3qyj_A 47 LLANNFTVVATDLRGYGDSSRPASVP--HHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKL 124 (291)
T ss_dssp HHTTTSEEEEECCTTSTTSCCCCCCG--GGGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred HHhCCCEEEEEcCCCCCCCCCCCCCc--cccccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEE
Confidence 36789999999999999998765210 0024799999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhh---hhhhhhHHHHHHHhcCh-HHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNL---LRNTAAGKLFYKMVATS-ESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
|++++.+........ ........... ............ ... ......+...........++....+.....
T Consensus 125 vl~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (291)
T 3qyj_A 125 ALLDIAPTHKMYRTT---DQEFATAYYHWFFLIQPDNLPETLIG--ANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFS 199 (291)
T ss_dssp EEESCCCHHHHHHTC---CHHHHHHTTHHHHTTCSTTHHHHHHH--TCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHT
T ss_pred EEECCCCcchhhhcc---hhhhhHHHHHHHHhccCCCchHHHHc--CCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhc
Confidence 999875422100000 00000000000 000000000000 111 112222222222223334444444433222
Q ss_pred ccchHHHHHHHHhhhCC----CCCCccCCCCCCCEEEEecCCCCCCCh-HHHHHhhccCCCccEEEeCCCCCCcchhchh
Q 024971 158 ETGAADVFLEFICYSGG----PLPEELLPQVKCPVLIAWGDKDPWEPI-ELGRAYGNFDSVEDFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~ 232 (260)
.+.........+..... .+....+.++++|+|+|+|++|.+.+. .....+.+..++.+..+++ +||+++.|+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~E~P~ 278 (291)
T 3qyj_A 200 QPAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLP-CGHFLPEEAPE 278 (291)
T ss_dssp SHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCEEEEEETTSSHHHHSCHHHHHHTTBSSEEEEEES-SSSCHHHHSHH
T ss_pred CCCcchhHHHHHHcccccchhhcchhcCCccccceEEEecccccccchhhHHHHHHhhcCCcceeecc-CCCCchhhCHH
Confidence 22211111111111100 001235678999999999999975432 2344455556777888887 89999999999
Q ss_pred HHHHHHHHhhhh
Q 024971 233 SLSSACLHTLSY 244 (260)
Q Consensus 233 ~~~~~i~~~l~~ 244 (260)
++++.|.+|++.
T Consensus 279 ~v~~~i~~fL~~ 290 (291)
T 3qyj_A 279 ETYQAIYNFLTH 290 (291)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999999974
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=200.59 Aligned_cols=218 Identities=15% Similarity=0.147 Sum_probs=144.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
++||+|+++|+||||.|+.+. .++++++++|+.+++++++.++++++|||+||.+++.+|.++|++|+++|+
T Consensus 69 ~~g~~vi~~D~~G~G~s~~~~--------~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 140 (293)
T 3hss_A 69 AAGYRCITFDNRGIGATENAE--------GFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVL 140 (293)
T ss_dssp HTTEEEEEECCTTSGGGTTCC--------SCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEE
T ss_pred hcCCeEEEEccCCCCCCCCcc--------cCCHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhhe
Confidence 579999999999999987643 579999999999999999999999999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHH---HHHHhcc---CCCCcccHHHHHHHhccCC
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVR---NILCQCY---NDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~ 157 (260)
+++..... ........... .............. ....... ................ ..
T Consensus 141 ~~~~~~~~----------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 204 (293)
T 3hss_A 141 MATRGRLD----------RARQFFNKAEA-----ELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSM-WP 204 (293)
T ss_dssp ESCCSSCC----------HHHHHHHHHHH-----HHHHHTCCCCHHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHH-SC
T ss_pred ecccccCC----------hhhhHHHHHHH-----HHHhhcccchhhHHHHHHHhhhcccccccccccHHHHHHHHhh-cc
Confidence 99875321 00000000000 00000000000000 0000000 0000000111111111 01
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
.. ....+...............+.++++|+++++|++|.++|.+..+.+.+..+++++++++++||+++.++|+++.+.
T Consensus 205 ~~-~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 283 (293)
T 3hss_A 205 IK-STPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFERPEAVNTA 283 (293)
T ss_dssp CC-CCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCCTTHHHHSHHHHHHH
T ss_pred cc-ccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCceEEEeCCCcchHhhhCHHHHHHH
Confidence 11 11111222222223333456788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcc
Q 024971 238 CLHTLSYLH 246 (260)
Q Consensus 238 i~~~l~~~~ 246 (260)
|.+|++.+.
T Consensus 284 i~~fl~~~~ 292 (293)
T 3hss_A 284 MLKFFASVK 292 (293)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHhcC
Confidence 999998764
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.98 E-value=7.4e-32 Score=198.61 Aligned_cols=232 Identities=16% Similarity=0.155 Sum_probs=151.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+.+.... ...++++++++|+.+++++++. ++++++||||||.+++.+|.++|++|++
T Consensus 50 ~l~~~~~vi~~D~~G~G~S~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~ 126 (297)
T 2qvb_A 50 HLEGLGRLVACDLIGMGASDKLSPSG---PDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQG 126 (297)
T ss_dssp GGTTSSEEEEECCTTSTTSCCCSSCS---TTSSCHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEE
T ss_pred HHhhcCeEEEEcCCCCCCCCCCCCcc---ccCcCHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhhe
Confidence 47788999999999999998764100 1238999999999999999999 9999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc-
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET- 159 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (260)
+|++++......... ........+.. +.... ..... ............... ......+....+.......
T Consensus 127 lvl~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~-~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 197 (297)
T 2qvb_A 127 IAFMEAIVTPMTWAD---WPPAVRGVFQG-FRSPQ-GEPMA--LEHNIFVERVLPGAI--LRQLSDEEMNHYRRPFVNGG 197 (297)
T ss_dssp EEEEEECCSCBCGGG---SCGGGHHHHHH-HTSTT-HHHHH--HTTCHHHHTHHHHTC--SSCCCHHHHHHHHGGGCSSS
T ss_pred eeEeccccCCccCCC---CChHHHHHHHH-Hhccc-chhhh--ccccHHHHHHHhccc--cccCCHHHHHHHHHHhcCcc
Confidence 999999764321100 00111111111 11111 10000 011112222222111 1223333333333332222
Q ss_pred chHHHHHHHHhhhCC-----------CCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcch
Q 024971 160 GAADVFLEFICYSGG-----------PLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 228 (260)
........+...... .+....+.++++|+++++|++|.+++.+..+.+.+.+++ +++++ ++||+++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~ 275 (297)
T 2qvb_A 198 EDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIITGRIRDYVRSWPNQ-TEITV-PGVHFVQE 275 (297)
T ss_dssp GGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHTSSSE-EEEEE-EESSCGGG
T ss_pred cchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEEEEecCCCCcCCHHHHHHHHHHcCC-eEEEe-cCccchhh
Confidence 122222222111100 011234567899999999999999999999999999999 99999 99999999
Q ss_pred hchhHHHHHHHHhhhhccc
Q 024971 229 SLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~~~~ 247 (260)
++|+++.+.|.+|++.+..
T Consensus 276 ~~p~~~~~~i~~fl~~~~~ 294 (297)
T 2qvb_A 276 DSPEEIGAAIAQFVRRLRS 294 (297)
T ss_dssp TCHHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHhh
Confidence 9999999999999987643
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-32 Score=198.96 Aligned_cols=229 Identities=16% Similarity=0.139 Sum_probs=149.9
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++||+|+++|+||||.|+.+.... ....+++++++++.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 50 ~l~~g~~v~~~d~~G~G~s~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~l 126 (282)
T 3qvm_A 50 ELEKQFTVIVFDYVGSGQSDLESFST---KRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDI 126 (282)
T ss_dssp HHHTTSEEEECCCTTSTTSCGGGCCT---TGGGSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHGGGEEEE
T ss_pred HHhcCceEEEEecCCCCCCCCCCCCc---cccccHHHHHHHHHHHHHHcCCCceEEEEecccHHHHHHHHHhCchhhheE
Confidence 35679999999999999998764210 133489999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHH-HhccCCCCcccHHHHHHHhccCCccc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNIL-CQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
|+++|......... .+........+....... ..........+ ...... .........+...... .
T Consensus 127 vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~ 193 (282)
T 3qvm_A 127 TMICPSPCFMNFPP-DYVGGFERDDLEELINLM---------DKNYIGWANYLAPLVMGA--SHSSELIGELSGSFCT-T 193 (282)
T ss_dssp EEESCCSBSBEETT-TEECSBCHHHHHHHHHHH---------HHCHHHHHHHHHHHHHCT--TSCHHHHHHHHHHHHH-S
T ss_pred EEecCcchhccCch-hhhchhccccHHHHHHHH---------hcchhhHHHHHHhhccCC--ccchhhHHHHHHHHhc-C
Confidence 99999764432110 001111111111111000 00011111111 111111 1111111111111101 1
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLH 240 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 240 (260)
.......+.......+....+.++++|+++++|++|.+++.+..+.+.+..+++++++++++||+++.++|+++.+.|.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 273 (282)
T 3qvm_A 194 DPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNSQLELIQAEGHCLHMTDAGLITPLLIH 273 (282)
T ss_dssp CHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCCCCcEEEecCCCCcccccCHHHHHHHHHH
Confidence 11122222222222333566788999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcc
Q 024971 241 TLSYLH 246 (260)
Q Consensus 241 ~l~~~~ 246 (260)
|++...
T Consensus 274 fl~~~~ 279 (282)
T 3qvm_A 274 FIQNNQ 279 (282)
T ss_dssp HHHHC-
T ss_pred HHHhcC
Confidence 998654
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-30 Score=190.82 Aligned_cols=218 Identities=16% Similarity=0.144 Sum_probs=134.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++
T Consensus 51 ~L~~~~~vi~~Dl~G~G~S~~~~~-----~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 125 (285)
T 3bwx_A 51 RLAGDWRVLCPEMRGRGDSDYAKD-----PMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAA 125 (285)
T ss_dssp HHBBTBCEEEECCTTBTTSCCCSS-----GGGCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HhhcCCEEEeecCCCCCCCCCCCC-----ccccCHHHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEE
Confidence 367799999999999999987531 146899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhh---hhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHH----HHHhc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT---AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELV----EKILQ 154 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 154 (260)
|++++.+... ......+....... ....... ..+.......+. ....... .....
T Consensus 126 vl~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 187 (285)
T 3bwx_A 126 VLNDVGPEVS---------PEGLERIRGYVGQGRNFETWMHAA------RALQESSGDVYP---DWDITQWLRYAKRIMV 187 (285)
T ss_dssp EEESCCSSCC---------HHHHHHHHHHTTCCCEESSHHHHH------HHHHHHHTTTST---TCCHHHHHHHHHHHEE
T ss_pred EEecCCcccC---------cchhHHHHHHhcCCcccccHHHHH------HHHHHhhhhccc---ccChHHHHHHHHhhhe
Confidence 9987643210 00000000000000 0000000 000000000000 0111111 11110
Q ss_pred cCCcc----chHHHHHHHHhhh----CCCCCCccCCCC-CCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCC
Q 024971 155 PGLET----GAADVFLEFICYS----GGPLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHC 225 (260)
Q Consensus 155 ~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 225 (260)
..... ............. ...+....+.++ ++|+|+|+|++|.+++++..+.+.+. +++++++++++||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~-~~~~~~~i~~~gH~ 266 (285)
T 3bwx_A 188 LGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMASR-PGVELVTLPRIGHA 266 (285)
T ss_dssp ECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEEETTCSSSCHHHHHHHHTS-TTEEEEEETTCCSC
T ss_pred eCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEEeCCCCccCHHHHHHHHhC-CCcEEEEeCCCCcc
Confidence 00000 0000000000000 000001112334 79999999999999999999999998 99999999999999
Q ss_pred cchhchhHHHHHHHHhhhh
Q 024971 226 PQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 226 ~~~~~p~~~~~~i~~~l~~ 244 (260)
++.|+|+.+ +.|.+|++.
T Consensus 267 ~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 267 PTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp CCSCSHHHH-HHHHHHHTT
T ss_pred chhhCchHH-HHHHHHHHh
Confidence 999999987 578899864
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=192.97 Aligned_cols=217 Identities=14% Similarity=0.064 Sum_probs=138.7
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
+||+|+++|+||||.|+.+. ...++++++++++.+++++++. ++++++||||||.+++.+|.++|++|+++|+
T Consensus 30 ~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 103 (258)
T 3dqz_A 30 AGHRVTAVELAASGIDPRPI------QAVETVDEYSKPLIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVF 103 (258)
T ss_dssp TTCEEEEECCTTSTTCSSCG------GGCCSHHHHHHHHHHHHHTSCTTCCEEEEEETTHHHHHHHHHTTCGGGEEEEEE
T ss_pred CCCEEEEecCCCCcCCCCCC------CccccHHHhHHHHHHHHHHhcccCceEEEEeChhHHHHHHHHHhChHhhcEEEE
Confidence 47999999999999998765 2458999999999999999988 8999999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhh----hhhhhhh---HH--HHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQN----LLRNTAA---GK--LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
+++........ .......+.. ....... .. ...........+. ..+... ...+.......
T Consensus 104 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~ 172 (258)
T 3dqz_A 104 LNAFLPDTTHV-----PSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMK----ARLYQN--CPIEDYELAKM 172 (258)
T ss_dssp ESCCCCCSSSC-----TTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHH----HHTSTT--SCHHHHHHHHH
T ss_pred ecCCCCCCCCc-----chHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHH----HHhhcc--CCHHHHHHHHH
Confidence 99964322110 0000111000 0000000 00 0000000000011 001000 11111111111
Q ss_pred cCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHH
Q 024971 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
....... +...... ..........++|+++++|++|.++|++..+.+.+..+++++++++++||+++.++|+++
T Consensus 173 ~~~~~~~---~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 246 (258)
T 3dqz_A 173 LHRQGSF---FTEDLSK---KEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVSKVYEIDGGDHMVMLSKPQKL 246 (258)
T ss_dssp HCCCEEC---CHHHHHT---SCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCCSCEEEETTCCSCHHHHSHHHH
T ss_pred hccCCch---hhhhhhc---cccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCCcccEEEcCCCCCchhhcChHHH
Confidence 1000000 1111110 111222233479999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhh
Q 024971 235 SSACLHTLSY 244 (260)
Q Consensus 235 ~~~i~~~l~~ 244 (260)
++.|.+|++.
T Consensus 247 ~~~i~~fl~~ 256 (258)
T 3dqz_A 247 FDSLSAIATD 256 (258)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999975
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-31 Score=196.49 Aligned_cols=232 Identities=17% Similarity=0.163 Sum_probs=149.8
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+.+.... ...++++++++|+.+++++++. ++++++||||||.+++.+|.++|++|++
T Consensus 51 ~L~~~~~vi~~D~~G~G~S~~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~ 127 (302)
T 1mj5_A 51 HCAGLGRLIACDLIGMGDSDKLDPSG---PERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQG 127 (302)
T ss_dssp GGTTSSEEEEECCTTSTTSCCCSSCS---TTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEE
T ss_pred HhccCCeEEEEcCCCCCCCCCCCCCC---cccccHHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhh
Confidence 46778999999999999998764100 1238999999999999999998 9999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc-
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET- 159 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (260)
+|++++......... ........+.. +.... .... ...........+.... ......+....+.......
T Consensus 128 lvl~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~-~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 198 (302)
T 1mj5_A 128 IAYMEAIAMPIEWAD---FPEQDRDLFQA-FRSQA-GEEL--VLQDNVFVEQVLPGLI--LRPLSEAEMAAYREPFLAAG 198 (302)
T ss_dssp EEEEEECCSCBCGGG---SCGGGHHHHHH-HHSTT-HHHH--HTTTCHHHHTHHHHTS--SSCCCHHHHHHHHGGGCSSS
T ss_pred eeeecccCCchhhhh---hhHHHHHHHHH-Hhccc-hhhh--hcChHHHHHHHHHhcC--cccCCHHHHHHHHHHhhccc
Confidence 999999764221000 00111111111 11000 0000 0001111222221111 1122333333333322221
Q ss_pred chHHHHHHHHhhhC-----------CCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcch
Q 024971 160 GAADVFLEFICYSG-----------GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 160 ~~~~~~~~~~~~~~-----------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 228 (260)
........+..... .......+.++++|+++++|++|.++|++..+.+.+.+++ +++++ ++||+++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~ 276 (302)
T 1mj5_A 199 EARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQ-TEITV-AGAHFIQE 276 (302)
T ss_dssp GGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSHHHHHHHTTCSSE-EEEEE-EESSCGGG
T ss_pred ccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCCeEEEEeCCCCCCChHHHHHHHHhcCC-ceEEe-cCcCcccc
Confidence 11122111111100 0001345678899999999999999999999999999999 99999 99999999
Q ss_pred hchhHHHHHHHHhhhhccc
Q 024971 229 SLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~~~~ 247 (260)
++|+++++.|.+|++....
T Consensus 277 e~p~~~~~~i~~fl~~~~~ 295 (302)
T 1mj5_A 277 DSPDEIGAAIAAFVRRLRP 295 (302)
T ss_dssp TCHHHHHHHHHHHHHHHSC
T ss_pred cCHHHHHHHHHHHHHhhcc
Confidence 9999999999999986544
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-30 Score=191.04 Aligned_cols=221 Identities=19% Similarity=0.204 Sum_probs=145.7
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
+||+|+++|+||||.|+... ...++++++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++
T Consensus 72 ~g~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~ 145 (315)
T 4f0j_A 72 AGYRVIAVDQVGFCKSSKPA------HYQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLV 145 (315)
T ss_dssp TTCEEEEECCTTSTTSCCCS------SCCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCeEEEeecCCCCCCCCCC------ccccCHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEe
Confidence 48999999999999998866 247899999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCC--CcccHHHHHHHhccCCccchH
Q 024971 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDT--SQVTEELVEKILQPGLETGAA 162 (260)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 162 (260)
+|.......... ............... .............+... .....................
T Consensus 146 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (315)
T 4f0j_A 146 NPIGLEDWKALG-VPWRSVDDWYRRDLQ------------TSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRE 212 (315)
T ss_dssp SCSCSSCHHHHT-CCCCCHHHHHHHHTT------------CCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHH
T ss_pred cCcccCCccccc-chhhhhHHHHhhccc------------CChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcc
Confidence 986422110000 000001111111100 11111222221111111 111112222111111111111
Q ss_pred HHHH---HHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCC----------------hHHHHHhhccCCCccEEEeCCCC
Q 024971 163 DVFL---EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP----------------IELGRAYGNFDSVEDFIVLPNVG 223 (260)
Q Consensus 163 ~~~~---~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~----------------~~~~~~~~~~~~~~~~~~~~~~g 223 (260)
.... ..............+.++++|+++++|++|.++| .+..+.+.+..+++++++++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 292 (315)
T 4f0j_A 213 SVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLG 292 (315)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCC
T ss_pred hhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCC
Confidence 1000 0111111223355688899999999999999999 77788888889999999999999
Q ss_pred CCcchhchhHHHHHHHHhhhh
Q 024971 224 HCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 224 H~~~~~~p~~~~~~i~~~l~~ 244 (260)
|+++.++|+++++.|.+||+.
T Consensus 293 H~~~~~~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 293 HTPQIQAPERFHQALLEGLQT 313 (315)
T ss_dssp SCHHHHSHHHHHHHHHHHHCC
T ss_pred cchhhhCHHHHHHHHHHHhcc
Confidence 999999999999999999964
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=190.99 Aligned_cols=218 Identities=15% Similarity=0.189 Sum_probs=139.1
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
|+++|+|+++|+||||.|....+.. ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|
T Consensus 64 L~~~~~vi~~D~~G~G~s~~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lv 140 (286)
T 2qmq_A 64 IIQNFVRVHVDAPGMEEGAPVFPLG---YQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLV 140 (286)
T ss_dssp HHTTSCEEEEECTTTSTTCCCCCTT---CCCCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HhcCCCEEEecCCCCCCCCCCCCCC---CCccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEE
Confidence 5678999999999999887643210 0114999999999999999999999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhh--hhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRN--TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
++++..... ............ ................. .............+ .......
T Consensus 141 l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~ 201 (286)
T 2qmq_A 141 LINIDPNAK----------GWMDWAAHKLTGLTSSIPDMILGHLFSQEEL--------SGNSELIQKYRGII-QHAPNLE 201 (286)
T ss_dssp EESCCCCCC----------CHHHHHHHHHHHTTSCHHHHHHHHHSCHHHH--------HTTCHHHHHHHHHH-HTCTTHH
T ss_pred EECCCCccc----------chhhhhhhhhccccccchHHHHHHHhcCCCC--------CcchHHHHHHHHHH-HhcCCcc
Confidence 999864221 011111100000 00001111111111000 00001111111111 1111111
Q ss_pred hHHHHHHHHhhhCCCC-CCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEEeCCCCCCcchhchhHHHHHH
Q 024971 161 AADVFLEFICYSGGPL-PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
....+........... ....+.++++|+++++|++|.++| ...+.+.+..+ ++++++++++||+++.++|+++.+.|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 280 (286)
T 2qmq_A 202 NIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-AVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAF 280 (286)
T ss_dssp HHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-HHHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHH
T ss_pred hHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-HHHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHH
Confidence 1222222222211111 134577899999999999999988 45666777776 89999999999999999999999999
Q ss_pred HHhhh
Q 024971 239 LHTLS 243 (260)
Q Consensus 239 ~~~l~ 243 (260)
.+|++
T Consensus 281 ~~fl~ 285 (286)
T 2qmq_A 281 KYFLQ 285 (286)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99985
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=191.60 Aligned_cols=216 Identities=13% Similarity=0.061 Sum_probs=137.4
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-cCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
+||+|+++|+||||.|+.+. ...++++++++|+.++++++ +.++++++||||||.+++.+|.++|++|+++|+
T Consensus 38 ~g~~v~~~D~~G~G~S~~~~------~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 111 (267)
T 3sty_A 38 SGHNVTALDLGASGINPKQA------LQIPNFSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVF 111 (267)
T ss_dssp TTCEEEEECCTTSTTCSCCG------GGCCSHHHHHHHHHHHHHTSCTTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEE
T ss_pred cCCeEEEeccccCCCCCCcC------CccCCHHHHHHHHHHHHHhcCCCCCEEEEEEcHHHHHHHHHHHhChhhcceEEE
Confidence 48999999999999998875 24589999999999999999 488999999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhh--hhhhhHHHHH----------HHhcChHHHHHHHHhccCCCCcccHHHHHH
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLL--RNTAAGKLFY----------KMVATSESVRNILCQCYNDTSQVTEELVEK 151 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
+++...... ........... ........+. ............ ...............
T Consensus 112 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 180 (267)
T 3sty_A 112 LSGLMPGPN--------IDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATN---VYHLSPIEDLALATA 180 (267)
T ss_dssp ESCCCCBTT--------BCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHHHHHH---TSTTSCHHHHHHHHH
T ss_pred ecCCCCCCc--------chHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHHHHHHh---hcccCCHHHHHHHHH
Confidence 998753211 00000000000 0000000000 000000000000 000000000011111
Q ss_pred HhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhch
Q 024971 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLY 231 (260)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 231 (260)
...... ......+.. ... .......++|+++|+|++|.+++++..+.+.+.++++++++++++||+++.++|
T Consensus 181 ~~~~~~-~~~~~~~~~---~~~----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 252 (267)
T 3sty_A 181 LVRPLY-LYLAEDISK---EVV----LSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMSKP 252 (267)
T ss_dssp HCCCEE-CCCHHHHHH---HCC----CCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSCCSEEEECTTCCSCHHHHSH
T ss_pred hhccch-hHHHHHhhc---chh----cccccccCCCEEEEEeCCCCccCHHHHHHHHHhCCCceEEEeCCCCccccccCh
Confidence 111100 000011110 000 111222369999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhhhc
Q 024971 232 LSLSSACLHTLSYL 245 (260)
Q Consensus 232 ~~~~~~i~~~l~~~ 245 (260)
+++++.|.+|++..
T Consensus 253 ~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 253 QQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999764
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=192.28 Aligned_cols=214 Identities=12% Similarity=0.013 Sum_probs=139.5
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC-ccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+|.++ |++|++
T Consensus 43 ~L~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~ 115 (264)
T 3ibt_A 43 LLARDFHVICPDWRGHDAKQTDS-------GDFDSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPK 115 (264)
T ss_dssp HHTTTSEEEEECCTTCSTTCCCC-------SCCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCE
T ss_pred HHHhcCcEEEEccccCCCCCCCc-------cccCHHHHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhhe
Confidence 46778999999999999999864 5789999999999999999999999999999999999999999 999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|++++.. .. .......+............ ........+... ......+.+........
T Consensus 116 lvl~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 174 (264)
T 3ibt_A 116 TIIIDWLL-QP--------HPGFWQQLAEGQHPTEYVAG----------RQSFFDEWAETT--DNADVLNHLRNEMPWFH 174 (264)
T ss_dssp EEEESCCS-SC--------CHHHHHHHHHTTCTTTHHHH----------HHHHHHHHHTTC--CCHHHHHHHHHTGGGSC
T ss_pred EEEecCCC-Cc--------ChhhcchhhcccChhhHHHH----------HHHHHHHhcccC--CcHHHHHHHHHhhhhcc
Confidence 99999875 10 01111111111111000000 000011111100 11222222222111111
Q ss_pred hH---HHHHHHHhh-hCCCCCCccCCCCCCCEEEEec--CCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHH
Q 024971 161 AA---DVFLEFICY-SGGPLPEELLPQVKCPVLIAWG--DKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 161 ~~---~~~~~~~~~-~~~~~~~~~~~~i~~P~l~i~g--~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
.. ......... .........+.++++|+++++| +.|...+.+..+.+.+..+++++++++++||+++.|+|+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 254 (264)
T 3ibt_A 175 GEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPSLENPVAV 254 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHCHHHH
T ss_pred chhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHHHHHHHhCCCceEEEcCCCCCcchhhCHHHH
Confidence 00 000000000 0001113567789999999965 44444456677788888999999999999999999999999
Q ss_pred HHHHHHhhh
Q 024971 235 SSACLHTLS 243 (260)
Q Consensus 235 ~~~i~~~l~ 243 (260)
++.|.+|++
T Consensus 255 ~~~i~~fl~ 263 (264)
T 3ibt_A 255 AQAIREFLQ 263 (264)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999999986
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=191.89 Aligned_cols=213 Identities=16% Similarity=0.159 Sum_probs=143.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++||+|+++|+||||.|+... .++++++++|+.+++++++ ++++++||||||.+++.+|.++| +|+++
T Consensus 45 ~l~~~~~vi~~d~~G~G~S~~~~--------~~~~~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~l 114 (262)
T 3r0v_A 45 RLAPHFTVICYDRRGRGDSGDTP--------PYAVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRL 114 (262)
T ss_dssp HHTTTSEEEEECCTTSTTCCCCS--------SCCHHHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEE
T ss_pred HHhcCcEEEEEecCCCcCCCCCC--------CCCHHHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceE
Confidence 35689999999999999998754 5799999999999999999 99999999999999999999999 99999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc-
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG- 160 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (260)
|+++|.......... ........+......... ......+.... .....+....+........
T Consensus 115 vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 178 (262)
T 3r0v_A 115 AVFEPPYAVDDSRPP--VPPDYQTRLDALLAEGRR----------GDAVTYFMTEG----VGVPPDLVAQMQQAPMWPGM 178 (262)
T ss_dssp EEECCCCCCSTTSCC--CCTTHHHHHHHHHHTTCH----------HHHHHHHHHHT----SCCCHHHHHHHHTSTTHHHH
T ss_pred EEEcCCcccccccch--hhhHHHHHHHHHhhccch----------hhHHHHHhhcc----cCCCHHHHHHHHhhhcccch
Confidence 999987654321111 011112222221111111 11111111111 1122233333222111000
Q ss_pred ---hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 161 ---AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 161 ---~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
....................++++++|+++++|++|.++|.+..+.+.+..+++++++++++||+ ++|+++.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~---~~p~~~~~~ 255 (262)
T 3r0v_A 179 EAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIPNARYVTLENQTHT---VAPDAIAPV 255 (262)
T ss_dssp HHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHHHSTTEEEEECCCSSSS---CCHHHHHHH
T ss_pred HHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHHhCCCCeEEEecCCCcc---cCHHHHHHH
Confidence 00000011111112233456788999999999999999999999999999999999999999993 689999999
Q ss_pred HHHhhh
Q 024971 238 CLHTLS 243 (260)
Q Consensus 238 i~~~l~ 243 (260)
|.+|++
T Consensus 256 i~~fl~ 261 (262)
T 3r0v_A 256 LVEFFT 261 (262)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 999986
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=204.22 Aligned_cols=220 Identities=13% Similarity=0.135 Sum_probs=137.6
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEec
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 85 (260)
||+|+++|+||||.|+... ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|+++
T Consensus 105 g~~Vi~~D~~G~G~S~~~~------~~~~~~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 178 (330)
T 3p2m_A 105 GEPALAVDLPGHGHSAWRE------DGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVD 178 (330)
T ss_dssp CCCEEEECCTTSTTSCCCS------SCBCCHHHHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEES
T ss_pred CCeEEEEcCCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEc
Confidence 8999999999999999655 2578999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC-CCCcccHHHHHHHhccCCccchHHH
Q 024971 86 ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN-DTSQVTEELVEKILQPGLETGAADV 164 (260)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (260)
+.+..... ...........................+..... ............+............
T Consensus 179 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (330)
T 3p2m_A 179 VTPSALQR-------------HAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNW 245 (330)
T ss_dssp CCHHHHHH-------------HHHHTCC-----------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCE
T ss_pred CCCccchh-------------hhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCce
Confidence 86432100 000000000000000000000000000000000 0000111111111110000000000
Q ss_pred HHHHHhhhCCC---CCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCcc-EEEeCCCCCCcchhchhHHHHHHHH
Q 024971 165 FLEFICYSGGP---LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED-FIVLPNVGHCPQVSLYLSLSSACLH 240 (260)
Q Consensus 165 ~~~~~~~~~~~---~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~~~p~~~~~~i~~ 240 (260)
........... ...+.+.++++|+++++|++|.+++.+..+.+.+.+++++ +++++++||+++.++|+++++.|.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 325 (330)
T 3p2m_A 246 VWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRG 325 (330)
T ss_dssp EESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCSSEEEEEEETTCCSCHHHHCHHHHHHHHHH
T ss_pred EEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeeEEEeCCCCCCcchhCHHHHHHHHHH
Confidence 00000000000 0012356789999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhhh
Q 024971 241 TLSY 244 (260)
Q Consensus 241 ~l~~ 244 (260)
|++.
T Consensus 326 fl~~ 329 (330)
T 3p2m_A 326 VLDT 329 (330)
T ss_dssp HTTC
T ss_pred HHhc
Confidence 9864
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-31 Score=194.29 Aligned_cols=216 Identities=14% Similarity=0.216 Sum_probs=145.2
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 90 ~L~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~l 162 (314)
T 3kxp_A 90 RLSDRFTTIAVDQRGHGLSDKPE-------TGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSV 162 (314)
T ss_dssp TTTTTSEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHcCCeEEEEeCCCcCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEE
Confidence 57788999999999999998544 57899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc---
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE--- 158 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 158 (260)
|++++.+... ......+......... ...........+..... ................
T Consensus 163 vl~~~~~~~~---------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 224 (314)
T 3kxp_A 163 VAIDFTPYIE---------TEALDALEARVNAGSQ------LFEDIKAVEAYLAGRYP---NIPADAIRIRAESGYQPVD 224 (314)
T ss_dssp EEESCCTTCC---------HHHHHHHHHHTTTTCS------CBSSHHHHHHHHHHHST---TSCHHHHHHHHHHSEEEET
T ss_pred EEeCCCCCCC---------cchhhHHHHHhhhchh------hhcCHHHHHHHHHhhcc---cCchHHHHHHhhhhhcccc
Confidence 9999865321 0111111111100000 00001111111111111 1111111111111000
Q ss_pred -----cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhH
Q 024971 159 -----TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLS 233 (260)
Q Consensus 159 -----~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 233 (260)
.......... ...........+.++++|+|+++|++|.+++.+..+.+.+.++++++++++++||+++.++|++
T Consensus 225 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~e~~~~ 303 (314)
T 3kxp_A 225 GGLRPLASSAAMAQT-ARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVNEVSPEI 303 (314)
T ss_dssp TEEEESSCHHHHHHH-HHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHCTTSCEEEETTCCSCHHHHCHHH
T ss_pred cccccccChhhhhhh-ccccCcchhhHhhcCCCCEEEEecCCCccCCHHHHHHHHHhCCCceEEEcCCCCCcchhhCHHH
Confidence 0011111111 1111113345567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh
Q 024971 234 LSSACLHTLS 243 (260)
Q Consensus 234 ~~~~i~~~l~ 243 (260)
+.+.|.+||+
T Consensus 304 ~~~~i~~fl~ 313 (314)
T 3kxp_A 304 TLKAITNFID 313 (314)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999986
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-32 Score=196.97 Aligned_cols=199 Identities=22% Similarity=0.233 Sum_probs=131.9
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
+||+|+++|+||||.|.... ..++++++++|+.++++.+ +.++++++||||||.+++.+|.++|++|+++|
T Consensus 77 ~Gy~Via~Dl~GhG~S~~~~-------~~~~~~~~~~d~~~~~~~l~~~~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lv 149 (281)
T 4fbl_A 77 AGYTVATPRLTGHGTTPAEM-------AASTASDWTADIVAAMRWLEERCDVLFMTGLSMGGALTVWAAGQFPERFAGIM 149 (281)
T ss_dssp TTCEEEECCCTTSSSCHHHH-------HTCCHHHHHHHHHHHHHHHHHHCSEEEEEEETHHHHHHHHHHHHSTTTCSEEE
T ss_pred CCCEEEEECCCCCCCCCccc-------cCCCHHHHHHHHHHHHHHHHhCCCeEEEEEECcchHHHHHHHHhCchhhhhhh
Confidence 58999999999999996543 3568999999999999987 56799999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchH
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
+++++..... ...... ...... .... .. . ......+...............
T Consensus 150 l~~~~~~~~~---------~~~~~~-~~~~~~------------~~~~----~~-~--~~~~~~~~~~~~~~~~~~~~~~ 200 (281)
T 4fbl_A 150 PINAALRMES---------PDLAAL-AFNPDA------------PAEL----PG-I--GSDIKAEGVKELAYPVTPVPAI 200 (281)
T ss_dssp EESCCSCCCC---------HHHHHH-HTCTTC------------CSEE----EC-C--CCCCSSTTCCCCCCSEEEGGGH
T ss_pred cccchhcccc---------hhhHHH-HHhHhh------------HHhh----hc-c--hhhhhhHHHHHhhhccCchHHH
Confidence 9998743210 000000 000000 0000 00 0 0000000000000000000011
Q ss_pred HHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC--CccEEEeCCCCCCcchh-chhHHHHHHH
Q 024971 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQVS-LYLSLSSACL 239 (260)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-~p~~~~~~i~ 239 (260)
..+....... ...+.+|++|+|+|+|++|.++|++..+.+.+.++ ++++++++++||+++.+ +++++.+.|.
T Consensus 201 ~~~~~~~~~~-----~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~ 275 (281)
T 4fbl_A 201 KHLITIGAVA-----EMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSL 275 (281)
T ss_dssp HHHHHHHHHH-----HHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred HHHHHhhhhc-----cccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHH
Confidence 1111111111 24567899999999999999999999999888764 45889999999998887 4999999999
Q ss_pred Hhhhh
Q 024971 240 HTLSY 244 (260)
Q Consensus 240 ~~l~~ 244 (260)
+||++
T Consensus 276 ~FL~~ 280 (281)
T 4fbl_A 276 AFIRK 280 (281)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99974
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=198.01 Aligned_cols=229 Identities=14% Similarity=0.162 Sum_probs=136.1
Q ss_pred CCccEEEEEcCCCCCCCCCC--CCCCCCCCCCccHHHHHHHHHHHHHhhc--CCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGYGYSDKP--NPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
++||+|+++|+||||.|+.+ .. ...++++++++|+.+++++++ .++++|+||||||.+|+.+|.++|++|+
T Consensus 56 ~~g~~via~Dl~G~G~S~~~~~~~-----~~~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~ 130 (328)
T 2cjp_A 56 ERGYRAVAPDLRGYGDTTGAPLND-----PSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVK 130 (328)
T ss_dssp TTTCEEEEECCTTSTTCBCCCTTC-----GGGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEE
T ss_pred HCCcEEEEECCCCCCCCCCcCcCC-----cccccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhhee
Confidence 35899999999999999876 21 146899999999999999999 8999999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhh---------hhhhhhHHHHHHHhcChHHHHHHHHh-------------c
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNL---------LRNTAAGKLFYKMVATSESVRNILCQ-------------C 137 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 137 (260)
++|+++++...... .. .....+... ...................+..++.. .
T Consensus 131 ~lvl~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (328)
T 2cjp_A 131 ALVNLSVHFSKRNP-----KM-NVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGL 204 (328)
T ss_dssp EEEEESCCCCCCCS-----SC-CHHHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTT
T ss_pred EEEEEccCCCcccc-----cC-ChHHHHHhhcccchHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchh
Confidence 99999875321100 00 000011000 00000000000000001111111100 0
Q ss_pred cCC-------CCcccHHHHHHHhccCCc---cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH----
Q 024971 138 YND-------TSQVTEELVEKILQPGLE---TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL---- 203 (260)
Q Consensus 138 ~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~---- 203 (260)
... ......+....+...... ......+......... .....+.++++|+++|+|++|.++|.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~ 283 (328)
T 2cjp_A 205 EAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPINWEL-TAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEY 283 (328)
T ss_dssp TTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHH-TGGGTTCCCCSCEEEEEETTCGGGGSTTHHHH
T ss_pred hhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHHHhcccchhh-hhhccCCccCCCEEEEEeCCcccccCcchhhh
Confidence 000 000111111111110000 0000001000000000 0011357889999999999999988642
Q ss_pred H--HHhhccCCCc-cEEEeCCCCCCcchhchhHHHHHHHHhhhh
Q 024971 204 G--RAYGNFDSVE-DFIVLPNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 204 ~--~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
. +.+.+.+|++ ++++++++||+++.|+|+++++.|.+|++.
T Consensus 284 ~~~~~~~~~~p~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 284 IHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIYDFIQK 327 (328)
T ss_dssp HHHSHHHHHSTTBCCCEEETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred hhhhhHHHHhcCCeeEEEcCCCCCCcchhCHHHHHHHHHHHHHh
Confidence 2 4566778998 899999999999999999999999999964
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=186.26 Aligned_cols=197 Identities=14% Similarity=0.126 Sum_probs=127.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHH---HHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN---DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
+||+|+++|+||||.|.... ..++++++++|+. +++++++.++++|+||||||.+|+.+|.++| |+++
T Consensus 42 ~g~~vi~~D~~GhG~s~~~~-------~~~~~~~~~~d~~~~~~~l~~~~~~~~~lvG~SmGG~ia~~~a~~~p--v~~l 112 (247)
T 1tqh_A 42 KGYTCHAPIYKGHGVPPEEL-------VHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGI 112 (247)
T ss_dssp TTCEEEECCCTTSSSCHHHH-------TTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSC--CSCE
T ss_pred CCCEEEecccCCCCCCHHHh-------cCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEeCHHHHHHHHHHHhCC--CCeE
Confidence 58999999999999764322 3467888777654 4667778899999999999999999999999 9999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHH-hcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM-VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
|+++++.... . ......... .....+... ......... ....+... ...
T Consensus 113 vl~~~~~~~~----------~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~--~~~ 162 (247)
T 1tqh_A 113 VTMCAPMYIK----------S-EETMYEGVL--EYAREYKKREGKSEEQIEQ---------------EMEKFKQT--PMK 162 (247)
T ss_dssp EEESCCSSCC----------C-HHHHHHHHH--HHHHHHHHHHTCCHHHHHH---------------HHHHHTTS--CCT
T ss_pred EEEcceeecC----------c-chhhhHHHH--HHHHHhhcccccchHHHHh---------------hhhcccCC--CHH
Confidence 9887643210 0 000000000 000000000 000111110 01111000 011
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC--ccEEEeCCCCCCcchhc-hhHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV--EDFIVLPNVGHCPQVSL-YLSLSSA 237 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~-p~~~~~~ 237 (260)
....+..+.. +..+.++++++|+|+|+|++|.++|++..+.+.+.+++ +++++++++||+++.|+ |+++++.
T Consensus 163 ~~~~~~~~~~-----~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~ 237 (247)
T 1tqh_A 163 TLKALQELIA-----DVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHED 237 (247)
T ss_dssp THHHHHHHHH-----HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHH
T ss_pred HHHHHHHHHH-----HHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCccHHHHHHH
Confidence 1111111110 11345778999999999999999999999998888875 68999999999999875 7999999
Q ss_pred HHHhhhhc
Q 024971 238 CLHTLSYL 245 (260)
Q Consensus 238 i~~~l~~~ 245 (260)
|.+|++..
T Consensus 238 i~~Fl~~~ 245 (247)
T 1tqh_A 238 IYAFLESL 245 (247)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhc
Confidence 99999754
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=194.09 Aligned_cols=222 Identities=17% Similarity=0.113 Sum_probs=137.6
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+... ...++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++
T Consensus 65 ~L~~~~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 138 (292)
T 3l80_A 65 KLPDSIGILTIDAPNSGYSPVSN------QANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGF 138 (292)
T ss_dssp TSCTTSEEEEECCTTSTTSCCCC------CTTCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEE
T ss_pred HHhhcCeEEEEcCCCCCCCCCCC------cccccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeE
Confidence 57889999999999999999443 256899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHH----HHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK----LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
|+++|................................ ................. ........+.....
T Consensus 139 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 210 (292)
T 3l80_A 139 IGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWR--------GYDYCQRQLNDVQS 210 (292)
T ss_dssp EEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHH--------HHHHHHHHHHTTTT
T ss_pred EEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhHH--------HHHHHHHHHHhhhh
Confidence 9999764322100000000000000000000000000 00000011110000000 00000000000000
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
... .. ........+..+.+++ ++|+++++|++|..++.+ . .+.+..++.+ ++++++||+++.++|+++++.
T Consensus 211 l~~-~~----~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~~~~-~~~~~~gH~~~~e~p~~~~~~ 281 (292)
T 3l80_A 211 LPD-FK----IRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKHTQTK-LILCGQHHYLHWSETNSILEK 281 (292)
T ss_dssp STT-CC----SSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCTTCE-EEECCSSSCHHHHCHHHHHHH
T ss_pred ccc-cc----hhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccCCCce-eeeCCCCCcchhhCHHHHHHH
Confidence 000 00 0000000001235566 899999999999999888 6 7888889988 999999999999999999999
Q ss_pred HHHhhhhcc
Q 024971 238 CLHTLSYLH 246 (260)
Q Consensus 238 i~~~l~~~~ 246 (260)
|.+|++..+
T Consensus 282 i~~fl~~~~ 290 (292)
T 3l80_A 282 VEQLLSNHE 290 (292)
T ss_dssp HHHHHHTCT
T ss_pred HHHHHHhcc
Confidence 999998654
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=200.25 Aligned_cols=225 Identities=16% Similarity=0.218 Sum_probs=146.6
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
+++||+|+++|+||||.|+.+... ...++++++++++.++++.++.++++++||||||.+++.+|.++|+ +.++|
T Consensus 48 ~~~g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~v 122 (279)
T 4g9e_A 48 IGKKWRVIAPDLPGHGKSTDAIDP----DRSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLM 122 (279)
T ss_dssp HHHHEEEEEECCTTSTTSCCCSCH----HHHSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEE
T ss_pred HhcCCeEEeecCCCCCCCCCCCCc----ccCCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEE
Confidence 567999999999999999875311 2457999999999999999999999999999999999999999998 89999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchH
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
+++++..........+........ . .. . .........+........ ........+.... ....
T Consensus 123 l~~~~~~~~~~~~~~~~~~~~~~~--~-~~-~---------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~ 185 (279)
T 4g9e_A 123 ITGTPPVAREEVGQGFKSGPDMAL--A-GQ-E---------IFSERDVESYARSTCGEP--FEASLLDIVARTD--GRAR 185 (279)
T ss_dssp EESCCCCCGGGHHHHBCCSTTGGG--G-GC-S---------CCCHHHHHHHHHHHHCSS--CCHHHHHHHHHSC--HHHH
T ss_pred EecCCCCCCCccchhhccchhhhh--c-Cc-c---------cccHHHHHHHHHhhccCc--ccHHHHHHHHhhh--ccch
Confidence 998875432110000000000000 0 00 0 000111111111111111 1112222211110 0011
Q ss_pred HHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhh-ccCCCccEEEeCCCCCCcchhchhHHHHHHHHh
Q 024971 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG-NFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHT 241 (260)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 241 (260)
.............+....+.++++|+++++|++|.++|.+..+.+. +..+++++++++++||+++.++|+++.+.|.+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 265 (279)
T 4g9e_A 186 RIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLARF 265 (279)
T ss_dssp HHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred HHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCCCCeEEEECCCCcchHHhCHHHHHHHHHHH
Confidence 1112222222222223446778999999999999999999998887 678899999999999999999999999999999
Q ss_pred hhhccccc
Q 024971 242 LSYLHTCR 249 (260)
Q Consensus 242 l~~~~~~~ 249 (260)
|+...+..
T Consensus 266 l~~~~~~~ 273 (279)
T 4g9e_A 266 IRDCTQLE 273 (279)
T ss_dssp HHHHHSSC
T ss_pred HHHhhhhh
Confidence 98765543
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=199.42 Aligned_cols=225 Identities=18% Similarity=0.178 Sum_probs=149.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC-ccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME-PEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lv 82 (260)
++||+|+++|+||||.|+.+. ..++++++++|+.++++.++.++++++||||||.+++.+|+++ |++|+++|
T Consensus 49 ~~Gy~Vi~~D~rG~G~S~~~~-------~~~s~~~~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lV 121 (456)
T 3vdx_A 49 DAGYRVITYDRRGFGQSSQPT-------TGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVA 121 (456)
T ss_dssp HHTEEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEE
T ss_pred HCCcEEEEECCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEE
Confidence 568999999999999998765 4689999999999999999999999999999999999988887 89999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCC----CCcccHHHHHHHhccCCc
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND----TSQVTEELVEKILQPGLE 158 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 158 (260)
++++....................+......... .........+...+.. ...........+......
T Consensus 122 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (456)
T 3vdx_A 122 FLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKA--------DRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAAS 193 (456)
T ss_dssp EESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHH--------CHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHT
T ss_pred EeCCcccccccccccccccchHHHHHHHHHhhhc--------cchHHHHHHHHHHhcccccccccccHHHHHHHhhhccc
Confidence 9998764432111111111011111111100000 0011111112121111 112333333333222211
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH-HHHHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
............+ ..+....+.++++|+|+++|++|.++|.+ ..+.+.+..+++++++++++||+++.++|+++.+.
T Consensus 194 ~~~~~~~~~~~~~--~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~ 271 (456)
T 3vdx_A 194 GGFFAAAAAPTTW--YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTA 271 (456)
T ss_dssp SCTTHHHHGGGGT--TCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHH
T ss_pred cchhhhhhhhhhh--hhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHH
Confidence 1111111111111 23345678899999999999999999988 67778888899999999999999999999999999
Q ss_pred HHHhhhhc
Q 024971 238 CLHTLSYL 245 (260)
Q Consensus 238 i~~~l~~~ 245 (260)
|.+|++..
T Consensus 272 I~~FL~~~ 279 (456)
T 3vdx_A 272 LLAFLAKA 279 (456)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999754
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-33 Score=208.77 Aligned_cols=242 Identities=17% Similarity=0.146 Sum_probs=144.1
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|++||+|+++|+||||.|+.+.... ....++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 47 ~l~~g~~v~~~D~~G~G~s~~~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~l 124 (304)
T 3b12_A 47 LLANEYTVVCADLRGYGGSSKPVGAP--DHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSL 124 (304)
Confidence 46789999999999999998763100 0146799999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHH-HHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRN-ILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
|++++.................................... ......+.. ++............+....+........
T Consensus 125 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (304)
T 3b12_A 125 AVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIG-ADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPA 203 (304)
Confidence 99998754321111000000000000000000000000000 000011111 1111111111122222222222111111
Q ss_pred hHHHHHHHHhhhC----CCCCCccCCCCCCCEEEEecCCCC-CCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHH
Q 024971 161 AADVFLEFICYSG----GPLPEELLPQVKCPVLIAWGDKDP-WEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 161 ~~~~~~~~~~~~~----~~~~~~~~~~i~~P~l~i~g~~D~-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
........+.... .......+.++++|+|+|+|++|. +.+....+.+.+..++++++++ ++||+++.++|++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~ 282 (304)
T 3b12_A 204 AIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASL-PGGHFFVDRFPDDTA 282 (304)
Confidence 1111111111110 111112267889999999999995 4466667777777888999999 999999999999999
Q ss_pred HHHHHhhhhccc
Q 024971 236 SACLHTLSYLHT 247 (260)
Q Consensus 236 ~~i~~~l~~~~~ 247 (260)
+.|.+||+....
T Consensus 283 ~~i~~fl~~~~~ 294 (304)
T 3b12_A 283 RILREFLSDARS 294 (304)
Confidence 999999987754
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=188.38 Aligned_cols=214 Identities=13% Similarity=0.180 Sum_probs=124.4
Q ss_pred CCC-CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCc--eEEEEeChhhHHHHH---HHhhCc
Q 024971 2 VLA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQ--AFFICNSIGGLVGLQ---AAVMEP 75 (260)
Q Consensus 2 ~L~-~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~lvGhS~Gg~~a~~---~a~~~p 75 (260)
.|+ ++|+|+++|+||||.|+... .++++++++|+.+++++++.++ ++|+||||||.+++. +|.++|
T Consensus 38 ~L~~~~~~vi~~Dl~GhG~S~~~~--------~~~~~~~a~~l~~~l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p 109 (264)
T 1r3d_A 38 HLARTQCAALTLDLPGHGTNPERH--------CDNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSR 109 (264)
T ss_dssp HHTTSSCEEEEECCTTCSSCC---------------CHHHHHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTT
T ss_pred HhcccCceEEEecCCCCCCCCCCC--------ccCHHHHHHHHHHHHHHhCcCCCceEEEEECHhHHHHHHHHHHHhhCc
Confidence 356 79999999999999998643 3588999999999999998876 999999999999999 888999
Q ss_pred cchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCC--CCcccHHHHHHHh
Q 024971 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND--TSQVTEELVEKIL 153 (260)
Q Consensus 76 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 153 (260)
++|+++|++++..... .. ................+. . .. ........+.. ...........+.
T Consensus 110 ~~v~~lvl~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (264)
T 1r3d_A 110 LNLRGAIIEGGHFGLQ---------EN-EEKAARWQHDQQWAQRFS-Q-QP---IEHVLSDWYQQAVFSSLNHEQRQTLI 174 (264)
T ss_dssp SEEEEEEEESCCCCCC---------SH-HHHHHHHHHHHHHHHHHH-H-SC---HHHHHHHHTTSGGGTTCCHHHHHHHH
T ss_pred cccceEEEecCCCCCC---------Ch-hhhhhhhcccHHHHHHhc-c-cc---HHHHHHHHhhhhhhhccCHHHHHHHH
Confidence 9999999998753210 00 000000000000000000 0 00 01111110000 0011111111111
Q ss_pred ccCCccchHHHHHHHHhh---hCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhc
Q 024971 154 QPGLETGAADVFLEFICY---SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSL 230 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 230 (260)
....... .......... ....+..+.++++++|+++|+|++|..++ ...+.+ + .++++++++||+++.|+
T Consensus 175 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~----~-~~~~~i~~~gH~~~~e~ 247 (264)
T 1r3d_A 175 AQRSANL-GSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-QLAESS----G-LSYSQVAQAGHNVHHEQ 247 (264)
T ss_dssp HHHTTSC-HHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-HHHHHH----C-SEEEEETTCCSCHHHHC
T ss_pred HHHhhcc-hHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-HHHHHh----C-CcEEEcCCCCCchhhcC
Confidence 1100011 1111111111 11122344567899999999999997542 222222 2 67899999999999999
Q ss_pred hhHHHHHHHHhhhhc
Q 024971 231 YLSLSSACLHTLSYL 245 (260)
Q Consensus 231 p~~~~~~i~~~l~~~ 245 (260)
|+++++.|.+|++.+
T Consensus 248 p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 248 PQAFAKIVQAMIHSI 262 (264)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999754
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-30 Score=190.01 Aligned_cols=224 Identities=14% Similarity=0.072 Sum_probs=134.5
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
+++|+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|+
T Consensus 61 ~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 135 (317)
T 1wm1_A 61 PERYKVLLFDQRGCGRSRPHAS-----LDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVL 135 (317)
T ss_dssp TTTEEEEEECCTTSTTCBSTTC-----CTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEE
T ss_pred ccCCeEEEECCCCCCCCCCCcc-----cccccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeE
Confidence 4689999999999999976431 13578999999999999999999999999999999999999999999999999
Q ss_pred eccCccccccC------CCCCCCcchhHHHhhhhhhh---hhHHHHHHHhcC-hHHHHHHHHhccCCCCcccHHHHHHHh
Q 024971 84 LNISLRMLHIK------KQPWYGRPLIRSFQNLLRNT---AAGKLFYKMVAT-SESVRNILCQCYNDTSQVTEELVEKIL 153 (260)
Q Consensus 84 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (260)
+++........ ............+....... .....+...... ........ ......+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 204 (317)
T 1wm1_A 136 RGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEA-----------AKLWSVWE 204 (317)
T ss_dssp ESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHH-----------HHHHHHHH
T ss_pred eccCCCchhhhhHHhhccchhhcHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccc-----------cccccccc
Confidence 98754211000 00000000000000000000 000000000000 00000000 00000000
Q ss_pred cc---CC-cc--------chHHHHHH----HH---hhhCCCC-CCccCCCCC-CCEEEEecCCCCCCChHHHHHhhccCC
Q 024971 154 QP---GL-ET--------GAADVFLE----FI---CYSGGPL-PEELLPQVK-CPVLIAWGDKDPWEPIELGRAYGNFDS 212 (260)
Q Consensus 154 ~~---~~-~~--------~~~~~~~~----~~---~~~~~~~-~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~ 212 (260)
.. .. .. ........ .. ....... ....+.+++ +|+|+|+|++|.++|++..+.+.+.+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p 284 (317)
T 1wm1_A 205 GETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWP 284 (317)
T ss_dssp HTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCT
T ss_pred cchhhccCCcccccccccchhhhHHHhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCC
Confidence 00 00 00 00000000 00 0000111 123456675 999999999999999999999999999
Q ss_pred CccEEEeCCCCCCcchh-chhHHHHHHHHhhh
Q 024971 213 VEDFIVLPNVGHCPQVS-LYLSLSSACLHTLS 243 (260)
Q Consensus 213 ~~~~~~~~~~gH~~~~~-~p~~~~~~i~~~l~ 243 (260)
++++++++++||+++.+ .++++.+.|.+|+.
T Consensus 285 ~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 285 EAELHIVEGAGHSYDEPGILHQLMIATDRFAG 316 (317)
T ss_dssp TSEEEEETTCCSSTTSHHHHHHHHHHHHHHTC
T ss_pred CceEEEECCCCCCCCCcchHHHHHHHHHHHhc
Confidence 99999999999998765 68889999988875
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-30 Score=183.03 Aligned_cols=202 Identities=14% Similarity=0.102 Sum_probs=139.3
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHH------HhhcCCceEEEEeChhhHHHHHHHhh-C
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC------KDVVKDQAFFICNSIGGLVGLQAAVM-E 74 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~lvGhS~Gg~~a~~~a~~-~ 74 (260)
.|++||+|+++|+||||.|+.. ..++++++++|+.+++ +.++ +++++|||+||.+++.+|.+ +
T Consensus 37 ~l~~g~~v~~~d~~g~g~s~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~ 106 (245)
T 3e0x_A 37 KYLEDYNCILLDLKGHGESKGQ--------CPSTVYGYIDNVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKL 106 (245)
T ss_dssp GGCTTSEEEEECCTTSTTCCSC--------CCSSHHHHHHHHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTC
T ss_pred HHHhCCEEEEecCCCCCCCCCC--------CCcCHHHHHHHHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhC
Confidence 4678999999999999999832 4679999999999999 8888 99999999999999999999 9
Q ss_pred ccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc
Q 024971 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (260)
Q Consensus 75 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
|+ |+++|+++|..... .........+... .....+... .. ..........+..
T Consensus 107 p~-v~~lvl~~~~~~~~------~~~~~~~~~~~~~----~~~~~~~~~----------~~------~~~~~~~~~~~~~ 159 (245)
T 3e0x_A 107 PN-VRKVVSLSGGARFD------KLDKDFMEKIYHN----QLDNNYLLE----------CI------GGIDNPLSEKYFE 159 (245)
T ss_dssp TT-EEEEEEESCCSBCT------TSCHHHHHHHHTT----CCCHHHHHH----------HH------TCSCSHHHHHHHT
T ss_pred cc-ccEEEEecCCCccc------cccHHHHHHHHHH----HHHhhcCcc----------cc------cccchHHHHHHHH
Confidence 99 99999999975431 0011111111110 000000000 00 0001111111111
Q ss_pred cCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHH
Q 024971 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
.... ....+..........+....+.++++|+++++|++|.+++.+..+.+.+..+++++++++++||+++.++|+++
T Consensus 160 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 237 (245)
T 3e0x_A 160 TLEK--DPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKHFLLVVNAKGV 237 (245)
T ss_dssp TSCS--SHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEESSCGGGHHHHTHHHH
T ss_pred HHhc--CcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCceEEEeCCCCcceEEecHHHH
Confidence 1111 11111111111112233556788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q 024971 235 SSACLHTL 242 (260)
Q Consensus 235 ~~~i~~~l 242 (260)
.+.|.+|+
T Consensus 238 ~~~i~~fl 245 (245)
T 3e0x_A 238 AEEIKNFI 245 (245)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhhC
Confidence 99999885
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=193.16 Aligned_cols=236 Identities=12% Similarity=0.071 Sum_probs=144.8
Q ss_pred CC-CCccEEEEEcCCC-CCCCCCCCCCCCCC-------CCCccHHHHHHHHHHHHHhhcCCceE-EEEeChhhHHHHHHH
Q 024971 2 VL-AKSHRVYSIDLIG-YGYSDKPNPRDFFD-------KPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQAA 71 (260)
Q Consensus 2 ~L-~~~~~v~~~D~~G-~G~S~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-lvGhS~Gg~~a~~~a 71 (260)
.| ++||+|+++|+|| +|.|+.+...+... ...++++++++|+.++++.++.++++ |+||||||.+|+.+|
T Consensus 93 ~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a 172 (377)
T 2b61_A 93 ALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWA 172 (377)
T ss_dssp SEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHH
T ss_pred ccccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHH
Confidence 47 7899999999999 78887653210000 01479999999999999999999998 999999999999999
Q ss_pred hhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhh----------------hh--hHHHHH-HHhcChHHHHH
Q 024971 72 VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN----------------TA--AGKLFY-KMVATSESVRN 132 (260)
Q Consensus 72 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~--~~~~~~-~~~~~~~~~~~ 132 (260)
.++|++|+++|++++....... ...........+.. .. ...... ........+..
T Consensus 173 ~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (377)
T 2b61_A 173 IDYPDFMDNIVNLCSSIYFSAE------AIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAK 246 (377)
T ss_dssp HHSTTSEEEEEEESCCSSCCHH------HHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHCchhhheeEEeccCcccccc------chhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHH
Confidence 9999999999999986432100 00000000000000 00 000000 00111222222
Q ss_pred HHHhccCCC------CcccHHHHHH----HhccCCccchHHHHHHHHhhhC----CCCCCccCCCCCCCEEEEecCCCCC
Q 024971 133 ILCQCYNDT------SQVTEELVEK----ILQPGLETGAADVFLEFICYSG----GPLPEELLPQVKCPVLIAWGDKDPW 198 (260)
Q Consensus 133 ~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~P~l~i~g~~D~~ 198 (260)
.+....... .......... +... ................. .......+.++++|+|+|+|++|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~ 325 (377)
T 2b61_A 247 AFGRATKSDGSFWGDYFQVESYLSYQGKKFLER-FDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQL 325 (377)
T ss_dssp HTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSS
T ss_pred HhccccccccccccchHHHHHHHHhhhhhhccc-cChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCccc
Confidence 211111110 0011111111 1111 11111111111111100 0112345788999999999999999
Q ss_pred CCh----HHHHHhhccCCCccEEEeC-CCCCCcchhchhHHHHHHHHhhhh
Q 024971 199 EPI----ELGRAYGNFDSVEDFIVLP-NVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 199 ~~~----~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
+|+ +..+.+.+..+++++++++ ++||+++.++|+++.+.|.+|++.
T Consensus 326 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 326 FKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred CCccchHHHHHHHHhcCCCceEEEeCCCCCchhhhcCHHHHHHHHHHHHhc
Confidence 999 8888898889999999999 999999999999999999999964
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=195.70 Aligned_cols=237 Identities=14% Similarity=0.097 Sum_probs=142.6
Q ss_pred CC-CCccEEEEEcCCC--CCCCCCCCCCCCCCC--------CCccHHHHHHHHHHHHHhhcCCc-eEEEEeChhhHHHHH
Q 024971 2 VL-AKSHRVYSIDLIG--YGYSDKPNPRDFFDK--------PFYTFETWASQLNDFCKDVVKDQ-AFFICNSIGGLVGLQ 69 (260)
Q Consensus 2 ~L-~~~~~v~~~D~~G--~G~S~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~lvGhS~Gg~~a~~ 69 (260)
.| ++||+|+++|+|| +|.|+.......... ..++++++++|+.+++++++.++ ++++||||||.+++.
T Consensus 137 ~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~ 216 (444)
T 2vat_A 137 AFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLE 216 (444)
T ss_dssp SBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHH
T ss_pred hhhccCCEEEEecCCCCCCCCCCCCCCCcccccccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHH
Confidence 46 6899999999999 688864221000000 13799999999999999999998 999999999999999
Q ss_pred HHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhh-hhhh-------------h----hhHHHHH-HHhcChHHH
Q 024971 70 AAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN-LLRN-------------T----AAGKLFY-KMVATSESV 130 (260)
Q Consensus 70 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------~----~~~~~~~-~~~~~~~~~ 130 (260)
+|.++|++|+++|++++........ ......... .... . ....... ........+
T Consensus 217 ~A~~~p~~v~~lVli~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (444)
T 2vat_A 217 WAFFGPEYVRKIVPIATSCRQSGWC------AAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAM 290 (444)
T ss_dssp HGGGCTTTBCCEEEESCCSBCCHHH------HHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHhChHhhheEEEEeccccCCccc------hhHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHH
Confidence 9999999999999999875321000 000000000 0000 0 0000000 000111111
Q ss_pred HHHHHhccCC---------------------------CCccc-HHHHHHHhccCCccchHHHHHHHHhhhCCC-------
Q 024971 131 RNILCQCYND---------------------------TSQVT-EELVEKILQPGLETGAADVFLEFICYSGGP------- 175 (260)
Q Consensus 131 ~~~~~~~~~~---------------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 175 (260)
...+...... ..... ...................+..........
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 370 (444)
T 2vat_A 291 DERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRA 370 (444)
T ss_dssp HHHSCCCCCCC---------------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTC
T ss_pred HHHhccCccccccccccccccccccccccccccccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhcccccc
Confidence 1111110000 00000 111100000000000111111111111110
Q ss_pred -CCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeC-CCCCCcchhchhHHHHHHHHhhhh
Q 024971 176 -LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP-NVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 176 -~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
+..+.+.++++|+|+|+|++|.+++.+..+.+.+.++++++++++ ++||+++.++|+++++.|.+||+.
T Consensus 371 ~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~ 441 (444)
T 2vat_A 371 GSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 441 (444)
T ss_dssp SSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred ccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCcchHHhCHHHHHHHHHHHHHH
Confidence 124457889999999999999999999999999999999999999 899999999999999999999964
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-30 Score=192.92 Aligned_cols=235 Identities=10% Similarity=0.035 Sum_probs=142.8
Q ss_pred CCccEEEEEcCCC--CCCCCCCCCCCC--C----CCCCccHHHHHHHHHHHHHhhcCCce-EEEEeChhhHHHHHHHhhC
Q 024971 4 AKSHRVYSIDLIG--YGYSDKPNPRDF--F----DKPFYTFETWASQLNDFCKDVVKDQA-FFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 4 ~~~~~v~~~D~~G--~G~S~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~lvGhS~Gg~~a~~~a~~~ 74 (260)
++||+|+++|+|| ||.|........ . ....++++++++|+.+++++++.+++ +++||||||.+|+.+|.++
T Consensus 87 ~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 166 (366)
T 2pl5_A 87 TNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAY 166 (366)
T ss_dssp TTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHS
T ss_pred ccccEEEEecCCCcccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhC
Confidence 7899999999999 888875421100 0 00147999999999999999999998 8999999999999999999
Q ss_pred ccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhh---------------hh--hHHHHHH-HhcChHHHHHHHHh
Q 024971 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN---------------TA--AGKLFYK-MVATSESVRNILCQ 136 (260)
Q Consensus 75 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~--~~~~~~~-~~~~~~~~~~~~~~ 136 (260)
|++|+++|++++....... ...........+.. .. ....... .......+...+..
T Consensus 167 p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (366)
T 2pl5_A 167 PNSLSNCIVMASTAEHSAM------QIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGR 240 (366)
T ss_dssp TTSEEEEEEESCCSBCCHH------HHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTT
T ss_pred cHhhhheeEeccCccCCCc------cchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhh
Confidence 9999999999997532100 00000000000000 00 0000000 01112222222222
Q ss_pred ccCCC-----CcccHHHHHHHhccCCccchHHHHHHHHhhhCCCC------CCccCCCCCCCEEEEecCCCCCCChHHHH
Q 024971 137 CYNDT-----SQVTEELVEKILQPGLETGAADVFLEFICYSGGPL------PEELLPQVKCPVLIAWGDKDPWEPIELGR 205 (260)
Q Consensus 137 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 205 (260)
..... .......................+..........+ ....+.++++|+|+|+|++|.++|++..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 320 (366)
T 2pl5_A 241 NPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSR 320 (366)
T ss_dssp SCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHH
T ss_pred hhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHH
Confidence 11111 00000000000000111111111211111111111 12367789999999999999999999999
Q ss_pred HhhccCC----CccEEEe-CCCCCCcchhchhHHHHHHHHhhhh
Q 024971 206 AYGNFDS----VEDFIVL-PNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 206 ~~~~~~~----~~~~~~~-~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
.+.+.++ +++++++ +++||+++.++|+++.+.|.+|++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 321 EIVKSLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 364 (366)
T ss_dssp HHHHHHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHhhhcccCeEEEEeCCCCCcchhhcChhHHHHHHHHHHcc
Confidence 8888877 8899999 8999999999999999999999964
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-30 Score=194.86 Aligned_cols=236 Identities=14% Similarity=0.071 Sum_probs=141.4
Q ss_pred CCccEEEEEcCCCCCCCCC-------CCCCCCCCC-------CCccHHHHHHHHHHHHHhhcCCceE-EEEeChhhHHHH
Q 024971 4 AKSHRVYSIDLIGYGYSDK-------PNPRDFFDK-------PFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGL 68 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~-------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-lvGhS~Gg~~a~ 68 (260)
++||+|+++|+||||.|++ +........ ..++++++++|+.+++++++.++++ |+||||||.+++
T Consensus 83 ~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~ 162 (377)
T 3i1i_A 83 TNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQ 162 (377)
T ss_dssp TTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHH
T ss_pred cccEEEEEecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHH
Confidence 4799999999999987542 110000000 1569999999999999999999986 999999999999
Q ss_pred HHHhhCccchhhceE-eccCccccccCCCCCCCcchhHHHhhhh-hh-----------hh---h--HHHHHH-HhcChHH
Q 024971 69 QAAVMEPEICRGMIL-LNISLRMLHIKKQPWYGRPLIRSFQNLL-RN-----------TA---A--GKLFYK-MVATSES 129 (260)
Q Consensus 69 ~~a~~~p~~v~~lvl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~---~--~~~~~~-~~~~~~~ 129 (260)
.+|.++|++|+++|+ +++........ ........... .. .. . ...... .......
T Consensus 163 ~~a~~~p~~v~~lvl~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 236 (377)
T 3i1i_A 163 QWAVHYPHMVERMIGVITNPQNPIITS------VNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHF 236 (377)
T ss_dssp HHHHHCTTTBSEEEEESCCSBCCHHHH------HHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHH
T ss_pred HHHHHChHHHHHhcccCcCCCcCCchh------hHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHH
Confidence 999999999999999 77654311000 00000000000 00 00 0 000000 0011111
Q ss_pred HHHHHHhccCCC--------CcccHHHHHHHhccCCccchHHHHHHHHhhhC-------CCCCCccCCCCCCCEEEEecC
Q 024971 130 VRNILCQCYNDT--------SQVTEELVEKILQPGLETGAADVFLEFICYSG-------GPLPEELLPQVKCPVLIAWGD 194 (260)
Q Consensus 130 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~P~l~i~g~ 194 (260)
+...+....... .......................+........ .....+.+.++++|+|+|+|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~ 316 (377)
T 3i1i_A 237 YETTYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCK 316 (377)
T ss_dssp HHHHSCCCSSCCGGGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBT
T ss_pred HHHHhhhhhccccccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecC
Confidence 111111100000 00012222222221111112222222211111 111134567899999999999
Q ss_pred CCCCCChHHHHHhhccC----CCccEEEeCC-CCCCcchhchhHHHHHHHHhhhhc
Q 024971 195 KDPWEPIELGRAYGNFD----SVEDFIVLPN-VGHCPQVSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 195 ~D~~~~~~~~~~~~~~~----~~~~~~~~~~-~gH~~~~~~p~~~~~~i~~~l~~~ 245 (260)
+|.++|++..+.+.+.+ ++++++++++ +||+++.|+|+++++.|.+||+..
T Consensus 317 ~D~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~ 372 (377)
T 3i1i_A 317 QDLLQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRK 372 (377)
T ss_dssp TCSSSCTHHHHHHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSC
T ss_pred CccccCHHHHHHHHHHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhh
Confidence 99999999999888887 9999999998 999999999999999999999753
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=192.86 Aligned_cols=212 Identities=18% Similarity=0.157 Sum_probs=136.4
Q ss_pred CCCccEEEEEcCCCC-CCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 3 LAKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 3 L~~~~~v~~~D~~G~-G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
|++||+|+++|+||| |.|..+. ..++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 90 L~~g~~vi~~D~~G~gG~s~~~~-------~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~l 162 (306)
T 2r11_A 90 WSSKYRTYAVDIIGDKNKSIPEN-------VSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSA 162 (306)
T ss_dssp HHHHSEEEEECCTTSSSSCEECS-------CCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HhcCCEEEEecCCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeE
Confidence 556999999999999 8887644 46799999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcc--cHHHHHHHhccCCcc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV--TEELVEKILQPGLET 159 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 159 (260)
|+++|...... .. ...+........ .. ....+...+.......... ...............
T Consensus 163 vl~~~~~~~~~------~~---~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (306)
T 2r11_A 163 AILSPAETFLP------FH---HDFYKYALGLTA--SN------GVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRN 225 (306)
T ss_dssp EEESCSSBTSC------CC---HHHHHHHHTTTS--TT------HHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCC
T ss_pred EEEcCccccCc------cc---HHHHHHHhHHHH--HH------HHHHHHHHhhCCccccccccccccHHHHHHHHhhhh
Confidence 99998764310 00 000100000000 00 0000111111100000000 000000000000000
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHH-hhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRA-YGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
.. ..............+.++++|+|+++|++|.+++.+..+. +.+..+++++++++++||+++.++|+++++.|
T Consensus 226 ~~-----~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 300 (306)
T 2r11_A 226 PN-----PNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERV 300 (306)
T ss_dssp CC-----CCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHSTTCEEEEETTCCTTHHHHSHHHHHHHH
T ss_pred hh-----hhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHCCCCEEEEeCCCCCCCcccCHHHHHHHH
Confidence 00 0000000001123456789999999999999999887775 44568899999999999999999999999999
Q ss_pred HHhhh
Q 024971 239 LHTLS 243 (260)
Q Consensus 239 ~~~l~ 243 (260)
.+|++
T Consensus 301 ~~fl~ 305 (306)
T 2r11_A 301 MRFFN 305 (306)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 99985
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=188.06 Aligned_cols=80 Identities=19% Similarity=0.132 Sum_probs=72.0
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
+++|+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|+
T Consensus 58 ~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl 132 (313)
T 1azw_A 58 PAKYRIVLFDQRGSGRSTPHAD-----LVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVL 132 (313)
T ss_dssp TTTEEEEEECCTTSTTSBSTTC-----CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEE
T ss_pred cCcceEEEECCCCCcCCCCCcc-----cccccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEE
Confidence 4689999999999999986531 13578999999999999999999999999999999999999999999999999
Q ss_pred eccCc
Q 024971 84 LNISL 88 (260)
Q Consensus 84 ~~~~~ 88 (260)
+++..
T Consensus 133 ~~~~~ 137 (313)
T 1azw_A 133 RGIFL 137 (313)
T ss_dssp ESCCC
T ss_pred ecccc
Confidence 98753
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=185.87 Aligned_cols=188 Identities=19% Similarity=0.170 Sum_probs=131.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc----CCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
+||+|+++|+||||.|+... ..++++++++|+.++++.+. .++++++||||||.+++.+|.++|++|++
T Consensus 55 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 127 (251)
T 2wtm_A 55 IGVATLRADMYGHGKSDGKF-------EDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKA 127 (251)
T ss_dssp TTCEEEEECCTTSTTSSSCG-------GGCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEE
T ss_pred CCCEEEEecCCCCCCCCCcc-------ccCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceE
Confidence 58999999999999998643 45788999999999998884 46899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhh-hhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQN-LLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
+|+++|...... .... ...... ... ........ . +.. ..
T Consensus 128 lvl~~~~~~~~~-------------~~~~~~~~~~~---------~~~----------~~~~~~~~-~----~~~---~~ 167 (251)
T 2wtm_A 128 LIPLSPAAMIPE-------------IARTGELLGLK---------FDP----------ENIPDELD-A----WDG---RK 167 (251)
T ss_dssp EEEESCCTTHHH-------------HHHHTEETTEE---------CBT----------TBCCSEEE-E----TTT---EE
T ss_pred EEEECcHHHhHH-------------HHhhhhhcccc---------CCc----------hhcchHHh-h----hhc---cc
Confidence 999998632110 0000 000000 000 00000000 0 000 00
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
.....+.. ....+..+.+.++++|+|+++|++|.++|++..+.+.+.++++++++++++||++ .++|+++.+.|.
T Consensus 168 ~~~~~~~~----~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~ 242 (251)
T 2wtm_A 168 LKGNYVRV----AQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCY-DHHLELVTEAVK 242 (251)
T ss_dssp EETHHHHH----HTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEETTCCTTC-TTTHHHHHHHHH
T ss_pred cchHHHHH----HHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCCCcEEEEECCCCccc-chhHHHHHHHHH
Confidence 00000000 0011112345678899999999999999999999998888999999999999999 999999999999
Q ss_pred Hhhhh
Q 024971 240 HTLSY 244 (260)
Q Consensus 240 ~~l~~ 244 (260)
+|++.
T Consensus 243 ~fl~~ 247 (251)
T 2wtm_A 243 EFMLE 247 (251)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99964
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-29 Score=180.92 Aligned_cols=205 Identities=19% Similarity=0.208 Sum_probs=136.8
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccc----
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI---- 77 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~---- 77 (260)
.|+++|+|+++|+||||.|.... ..++++++++++.++++.++.++++++||||||.+++.+|.++|++
T Consensus 42 ~l~~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~ 114 (267)
T 3fla_A 42 ALAPAVEVLAVQYPGRQDRRHEP-------PVDSIGGLTNRLLEVLRPFGDRPLALFGHSMGAIIGYELALRMPEAGLPA 114 (267)
T ss_dssp HHTTTEEEEEECCTTSGGGTTSC-------CCCSHHHHHHHHHHHTGGGTTSCEEEEEETHHHHHHHHHHHHTTTTTCCC
T ss_pred HhccCcEEEEecCCCCCCCCCCC-------CCcCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHhhhhhcccc
Confidence 36678999999999999998755 4679999999999999999989999999999999999999999987
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhh-hhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT-AAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+.+++++++......... .........+...+... ..... .... ..........
T Consensus 115 v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~~~~~~~~~- 169 (267)
T 3fla_A 115 PVHLFASGRRAPSRYRDD--DVRGASDERLVAELRKLGGSDAA---MLAD-------------------PELLAMVLPA- 169 (267)
T ss_dssp CSEEEEESCCCTTCCCCS--CTTCCCHHHHHHHHHHTCHHHHH---HHHS-------------------HHHHHHHHHH-
T ss_pred ccEEEECCCCccccccch--hhcccchHHHHHHHHHhcCcchh---hccC-------------------HHHHHHHHHH-
Confidence 899999987643321110 00000011111111000 00000 0000 0000000000
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCCCCCcchhchhHHH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
....+.....+ . ......+++|+++++|++|.+++.+..+.+.+..++ ++++++++ ||+.+.++|+++.
T Consensus 170 ----~~~~~~~~~~~----~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~~~~~~ 239 (267)
T 3fla_A 170 ----IRSDYRAVETY----R-HEPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLPG-GHFFLVDQAAPMI 239 (267)
T ss_dssp ----HHHHHHHHHHC----C-CCTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEESS-STTHHHHTHHHHH
T ss_pred ----HHHHHHhhhcc----c-ccccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEecC-CceeeccCHHHHH
Confidence 00001111111 1 111267899999999999999999999999988887 89999998 9999999999999
Q ss_pred HHHHHhhhhcccc
Q 024971 236 SACLHTLSYLHTC 248 (260)
Q Consensus 236 ~~i~~~l~~~~~~ 248 (260)
+.|.+|++.....
T Consensus 240 ~~i~~fl~~~~~~ 252 (267)
T 3fla_A 240 ATMTEKLAGPALT 252 (267)
T ss_dssp HHHHHHTC-----
T ss_pred HHHHHHhcccccc
Confidence 9999999877553
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=196.81 Aligned_cols=232 Identities=17% Similarity=0.177 Sum_probs=146.9
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
+||+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++
T Consensus 284 ~G~~v~~~D~~G~G~S~~~~~-----~~~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 358 (555)
T 3i28_A 284 AGYRVLAMDMKGYGESSAPPE-----IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASL 358 (555)
T ss_dssp TTCEEEEECCTTSTTSCCCSC-----GGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEecCCCCCCCCCCCC-----cccccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEE
Confidence 489999999999999987652 246889999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCCCC--cchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCC---------------------
Q 024971 85 NISLRMLHIKKQPWYG--RPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDT--------------------- 141 (260)
Q Consensus 85 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 141 (260)
+++............. ..................... .......+...+...
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (555)
T 3i28_A 359 NTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAEL-----EQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSP 433 (555)
T ss_dssp SCCCCCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHHHHH-----HHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSC
T ss_pred ccCCCCCCcccchHHHHhcCCccchhHHhhCCCchHHHH-----hhhHHHHHHHHhccccccccccccccccccccccCc
Confidence 9875432111100000 000000000000000000000 000111111111110
Q ss_pred ------CcccHHHHHHHhccCCccchHHHH---HHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC
Q 024971 142 ------SQVTEELVEKILQPGLETGAADVF---LEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS 212 (260)
Q Consensus 142 ------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 212 (260)
.....+....+............. ....... .......++++++|+|+++|++|.++|.+..+.+.+.++
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~ 512 (555)
T 3i28_A 434 EEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNW-KWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP 512 (555)
T ss_dssp SSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTTSCHHHHH-HHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT
T ss_pred cccccccccCHHHHHHHHHHHhcccchhHHHHHHhccccc-hhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC
Confidence 112222222222211111110000 0000000 001134567899999999999999999999999999999
Q ss_pred CccEEEeCCCCCCcchhchhHHHHHHHHhhhhccc
Q 024971 213 VEDFIVLPNVGHCPQVSLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 213 ~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~~~~ 247 (260)
++++++++++||+++.++|+++.+.|.+|++....
T Consensus 513 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 547 (555)
T 3i28_A 513 HLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDAR 547 (555)
T ss_dssp TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHTC
T ss_pred CceEEEeCCCCCCcchhCHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999986644
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-29 Score=182.17 Aligned_cols=221 Identities=18% Similarity=0.221 Sum_probs=136.7
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
+||+|+++|+||+|.|+.... ...++++++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++
T Consensus 52 ~G~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~ 126 (286)
T 3qit_A 52 QGYRVVAPDLFGHGRSSHLEM-----VTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILV 126 (286)
T ss_dssp TTCEEEEECCTTSTTSCCCSS-----GGGCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred cCeEEEEECCCCCCCCCCCCC-----CCCcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEe
Confidence 479999999999999987652 246899999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc-----
Q 024971 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET----- 159 (260)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 159 (260)
++......... ......+............ ................. ...........+.......
T Consensus 127 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 197 (286)
T 3qit_A 127 ELPLPAEESKK-----ESAVNQLTTCLDYLSSTPQ-HPIFPDVATAASRLRQA---IPSLSEEFSYILAQRITQPNQGGV 197 (286)
T ss_dssp SCCCCCCC--------CCHHHHHHHHHHHHTCCCC-CCCBSSHHHHHHHHHHH---STTSCHHHHHHHHHHTEEEETTEE
T ss_pred cCCCCCccccc-----hhhhHHHHHHHHHHhcccc-ccccccHHHHHHHhhcC---CcccCHHHHHHHhhccccccccce
Confidence 99764421110 1111111111100000000 00000000000000000 1111122222211111000
Q ss_pred ----chHHHHHHHHhhh----CCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhch
Q 024971 160 ----GAADVFLEFICYS----GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLY 231 (260)
Q Consensus 160 ----~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 231 (260)
............. ........+.++++|+++++|++|.+++.+..+.+.+..++++++++++ ||+++.++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p 276 (286)
T 3qit_A 198 RWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFLSG-GHNLHIDAA 276 (286)
T ss_dssp EECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHSTTSEEEEESS-SSCHHHHTH
T ss_pred eeeechhhhccccccccccccchhHHHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHCCCCeEEEeeC-CchHhhhCh
Confidence 0000000000000 0000023456789999999999999999999999999999999999999 999999999
Q ss_pred hHHHHHHHH
Q 024971 232 LSLSSACLH 240 (260)
Q Consensus 232 ~~~~~~i~~ 240 (260)
+++++.|.+
T Consensus 277 ~~~~~~i~~ 285 (286)
T 3qit_A 277 AALASLILT 285 (286)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhc
Confidence 999998864
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-29 Score=186.77 Aligned_cols=234 Identities=15% Similarity=0.100 Sum_probs=140.0
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
+||+|+++|+||||.|..+.. ...++++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++
T Consensus 53 ~g~~vi~~d~~g~g~s~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~ 127 (356)
T 2e3j_A 53 AGYRVVAIDQRGYGRSSKYRV-----QKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGI 127 (356)
T ss_dssp TTCEEEEECCTTSTTSCCCCS-----GGGGSHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEE
T ss_pred cCCEEEEEcCCCCCCCCCCCc-----ccccCHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEE
Confidence 489999999999999987652 135799999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCC---CCCCCcchhHHHhh-----------hhhhhhhHHHHHHHhcChHHHHHHHHhc-------------
Q 024971 85 NISLRMLHIKK---QPWYGRPLIRSFQN-----------LLRNTAAGKLFYKMVATSESVRNILCQC------------- 137 (260)
Q Consensus 85 ~~~~~~~~~~~---~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 137 (260)
+++........ .+.........+.. ............. ......+...+...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (356)
T 2e3j_A 128 SVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWYQDYFAVQDGIITEIE-EDLRGWLLGLTYTVSGEGMMAATKAAV 206 (356)
T ss_dssp SSCCCGGGSSCCSSCSSCCSCHHHHHHSSSCSSEEEHHHHHHHCSHHHHHHH-TTHHHHHHHHHHHTSHHHHHHHHHCCC
T ss_pred CCcccccccccCCCCCcccccchHHHHHhhcCCcHHHHHHHhcccchHHHHH-HhHHHHHHHHhhccccchhhccchhhc
Confidence 98641000000 00000000000000 0000000000000 00000011111000
Q ss_pred -------------------------------cC----CCCcccHHHHHHHhccCCccc---hHHHHHHHHhhhCCCCCCc
Q 024971 138 -------------------------------YN----DTSQVTEELVEKILQPGLETG---AADVFLEFICYSGGPLPEE 179 (260)
Q Consensus 138 -------------------------------~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 179 (260)
+. ............+........ ....+......... ....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 285 (356)
T 2e3j_A 207 DAGVDLESMDPIDVIRAGPLCMAEGARLKDAFVYPETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHD-LADQ 285 (356)
T ss_dssp -------CCCGGGTSTTSTTEEETTSCGGGGCCCCSSCCTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHH-TGGG
T ss_pred ccccccccccccccccccccccccchhhhhcccccccccccCCHHHHHHHHHHhcccCCchhHHHHHhcccChhh-hHhh
Confidence 00 000111222221111100000 01111111000000 0011
Q ss_pred cCCCCCCCEEEEecCCCCCCCh--HHHHHhhccCCCc-cEEEeCCCCCCcchhchhHHHHHHHHhhhhc
Q 024971 180 LLPQVKCPVLIAWGDKDPWEPI--ELGRAYGNFDSVE-DFIVLPNVGHCPQVSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 180 ~~~~i~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~~ 245 (260)
.+.++++|+|+|+|++|.++|. +..+.+.+.+|++ ++++++++||+++.|+|+++++.|.+|++.+
T Consensus 286 ~l~~i~~PvLii~G~~D~~~p~~~~~~~~l~~~~p~~~~~~~i~~aGH~~~~e~p~~~~~~i~~fl~~~ 354 (356)
T 2e3j_A 286 QGKPLTPPALFIGGQYDVGTIWGAQAIERAHEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFLGGL 354 (356)
T ss_dssp TTSCCCSCEEEEEETTCHHHHHTHHHHHTHHHHCTTEEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTS
T ss_pred cCCccCCCEEEEecCCCccccccHHHHHHHHHhCcCcceEEEecCcCcccchhCHHHHHHHHHHHHhhc
Confidence 3578999999999999999984 7888888889998 9999999999999999999999999999764
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-28 Score=180.03 Aligned_cols=221 Identities=17% Similarity=0.166 Sum_probs=125.0
Q ss_pred CCC--ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh--cC-CceEEEEeChhhHHHHHHHhh--Cc
Q 024971 3 LAK--SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV--VK-DQAFFICNSIGGLVGLQAAVM--EP 75 (260)
Q Consensus 3 L~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~lvGhS~Gg~~a~~~a~~--~p 75 (260)
|++ +|+|+++|+||||.|+.+. ...++++++++|+.++++++ +. ++++|+||||||.+|+.+|.+ +|
T Consensus 61 L~~~~~~~via~Dl~GhG~S~~~~------~~~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p 134 (316)
T 3c5v_A 61 IISRVQCRIVALDLRSHGETKVKN------PEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVP 134 (316)
T ss_dssp HHTTBCCEEEEECCTTSTTCBCSC------TTCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCT
T ss_pred HhhcCCeEEEEecCCCCCCCCCCC------ccccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCC
Confidence 555 8999999999999998754 24689999999999999999 65 689999999999999999985 57
Q ss_pred cchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhh-----hhH---HHHHHHh--cChHHHHHHHHhccCCCCccc
Q 024971 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNT-----AAG---KLFYKMV--ATSESVRNILCQCYNDTSQVT 145 (260)
Q Consensus 76 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 145 (260)
+ |+++|++++...... ............. ... ....... .....................
T Consensus 135 ~-v~~lvl~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (316)
T 3c5v_A 135 S-LLGLCMIDVVEGTAM---------DALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGIT 204 (316)
T ss_dssp T-EEEEEEESCCHHHHH---------HHHHHHHHHHHHSCSCBSSHHHHHHHHHHTTSCCCHHHHHHHHHHHEEECC---
T ss_pred C-cceEEEEcccccchh---------hhHHHHHHHHhhCccccccHHHHHHHhhhcccccchhhhhhhhhHHhhhccccc
Confidence 6 999999987521100 0000000000000 000 0000000 000000000000000000000
Q ss_pred -HHHH-H-HHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCC
Q 024971 146 -EELV-E-KILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNV 222 (260)
Q Consensus 146 -~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (260)
.... . ..............+... ... .....+.++++|+|+|+|++|.+.+......+ .++.++++++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~i~~P~Lli~g~~D~~~~~~~~~~~---~~~~~~~~i~~~ 277 (316)
T 3c5v_A 205 SPEGSKKDHPYTWRIELAKTEKYWDG--WFR--GLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQM---QGKFQMQVLPQC 277 (316)
T ss_dssp ---------CEEESCCGGGGHHHHHH--HHT--THHHHHHHSSSCEEEEESSCCCCCHHHHHHHH---TTCSEEEECCCC
T ss_pred cccccccccceeeeecccchhhhhhh--hhh--hhHHHhhcCCCCEEEEEecccccccHHHHHhh---CCceeEEEcCCC
Confidence 0000 0 000000000000000000 000 00123346899999999999986543333322 456899999999
Q ss_pred CCCcchhchhHHHHHHHHhhhhcc
Q 024971 223 GHCPQVSLYLSLSSACLHTLSYLH 246 (260)
Q Consensus 223 gH~~~~~~p~~~~~~i~~~l~~~~ 246 (260)
||+++.|+|+++++.|.+|++...
T Consensus 278 gH~~~~e~p~~~~~~i~~fl~~~~ 301 (316)
T 3c5v_A 278 GHAVHEDAPDKVAEAVATFLIRHR 301 (316)
T ss_dssp SSCHHHHSHHHHHHHHHHHHHHTT
T ss_pred CCcccccCHHHHHHHHHHHHHhcc
Confidence 999999999999999999996543
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-29 Score=184.59 Aligned_cols=217 Identities=15% Similarity=0.143 Sum_probs=138.0
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCC----ceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD----QAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
+||+|+++|+||||.|+... ....+++++++|+.++++.+..+ +++++|||+||.+++.+|.++|++|++
T Consensus 68 ~g~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~ 141 (303)
T 3pe6_A 68 LDLLVFAHDHVGHGQSEGER------MVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAG 141 (303)
T ss_dssp TTEEEEEECCTTSTTSCSST------TCCSSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSE
T ss_pred CCCcEEEeCCCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccE
Confidence 48999999999999998755 24578899999999999887543 899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc--
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE-- 158 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 158 (260)
+|+++|...... ......... ............... ................+......
T Consensus 142 lvl~~~~~~~~~---------~~~~~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (303)
T 3pe6_A 142 MVLISPLVLANP---------ESATTFKVL------AAKVLNSVLPNLSSG----PIDSSVLSRNKTEVDIYNSDPLICR 202 (303)
T ss_dssp EEEESCSSSBCH---------HHHHHHHHH------HHHHHHTTCCSCCCC----CCCGGGTCSCHHHHHHHHTCTTSCC
T ss_pred EEEECccccCch---------hccHHHHHH------HHHHHHHhcccccCC----ccchhhhhcchhHHHHhccCccccc
Confidence 999998753210 000000000 000000000000000 00000000111222222111110
Q ss_pred -cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC--CccEEEeCCCCCCcchhchhHHH
Q 024971 159 -TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
.............. ......+.++++|+++++|++|.+++.+..+.+.+..+ ++++++++++||+++.++|+++.
T Consensus 203 ~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 280 (303)
T 3pe6_A 203 AGLKVCFGIQLLNAV--SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTN 280 (303)
T ss_dssp SCCCHHHHHHHHHHH--HHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHH
T ss_pred cchhhhhHHHHHHHH--HHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHH
Confidence 00111111111000 00124567789999999999999999999999888877 78999999999999999999888
Q ss_pred HHHHHhhhhcccc
Q 024971 236 SACLHTLSYLHTC 248 (260)
Q Consensus 236 ~~i~~~l~~~~~~ 248 (260)
+.+.++++++++.
T Consensus 281 ~~~~~~~~~l~~~ 293 (303)
T 3pe6_A 281 SVFHEINMWVSQR 293 (303)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcc
Confidence 8877777777554
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-29 Score=187.73 Aligned_cols=216 Identities=14% Similarity=0.131 Sum_probs=137.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCC----ceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD----QAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
+||+|+++|+||||.|+.+. ....+++++++|+.++++.+..+ +++++|||+||.+++.+|.++|++|++
T Consensus 86 ~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~ 159 (342)
T 3hju_A 86 LDLLVFAHDHVGHGQSEGER------MVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAG 159 (342)
T ss_dssp TTEEEEEECCTTSTTSCSST------TCCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSE
T ss_pred CCCeEEEEcCCCCcCCCCcC------CCcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccce
Confidence 48999999999999998765 25678999999999999887543 899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc--
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE-- 158 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 158 (260)
+|+++|....... ........... +............ ...............+......
T Consensus 160 lvl~~~~~~~~~~-----~~~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 220 (342)
T 3hju_A 160 MVLISPLVLANPE-----SATTFKVLAAK----------VLNLVLPNLSLGP----IDSSVLSRNKTEVDIYNSDPLICR 220 (342)
T ss_dssp EEEESCCCSCCTT-----TTSHHHHHHHH----------HHHHHCTTCBCCC----CCGGGSCSCHHHHHHHHTCTTCCC
T ss_pred EEEECcccccchh-----hhhHHHHHHHH----------HHHHhccccccCc----ccccccccchHHHHHHhcCccccc
Confidence 9999987543210 00000000000 0000000000000 0000000111222222111110
Q ss_pred -cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC--CccEEEeCCCCCCcchhchhHHH
Q 024971 159 -TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
.............. ....+.+.++++|+|+++|++|.+++.+..+.+.+.++ ++++++++++||+++.++|+++.
T Consensus 221 ~~~~~~~~~~~~~~~--~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 298 (342)
T 3hju_A 221 AGLKVCFGIQLLNAV--SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTN 298 (342)
T ss_dssp SCCBHHHHHHHHHHH--HHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHH
T ss_pred ccccHHHHHHHHHHH--HHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHH
Confidence 00111111111000 00124567889999999999999999999999888877 78999999999999999999888
Q ss_pred HHHHHhhhhccc
Q 024971 236 SACLHTLSYLHT 247 (260)
Q Consensus 236 ~~i~~~l~~~~~ 247 (260)
+.+.++++++++
T Consensus 299 ~~~~~~~~~l~~ 310 (342)
T 3hju_A 299 SVFHEINMWVSQ 310 (342)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 887777766654
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-28 Score=182.39 Aligned_cols=233 Identities=11% Similarity=0.062 Sum_probs=135.2
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEec
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 85 (260)
+|+|+++|+||||.|+.+.. ..++++++++++.++++.++.++++++||||||.+++.+|.++|++|+++++++
T Consensus 128 ~~~vi~~dl~G~G~S~~~~~------~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (388)
T 4i19_A 128 AFHLVIPSLPGFGLSGPLKS------AGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNL 201 (388)
T ss_dssp CEEEEEECCTTSGGGCCCSS------CCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESS
T ss_pred CeEEEEEcCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEec
Confidence 89999999999999998762 468999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCC-CCCCcchhHHHhhh---hhh---------hhhHHHHHHHhcChHHHHHHHHhc---cCCC-----Ccc
Q 024971 86 ISLRMLHIKKQ-PWYGRPLIRSFQNL---LRN---------TAAGKLFYKMVATSESVRNILCQC---YNDT-----SQV 144 (260)
Q Consensus 86 ~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~---------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~ 144 (260)
|...+...... ..........+... ... ............++.....++... +... ...
T Consensus 202 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~ 281 (388)
T 4i19_A 202 LQTNLSGEPGELETLSDADKARLAVSERFLDDLSGPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAV 281 (388)
T ss_dssp CCCCBCCCGGGGGGCCHHHHHHHHTHHHHHHHTCHHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTS
T ss_pred CCCCCCCcccccccCCHHHHHHHHHHHHHHHcCChHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 76543211000 00000000000000 000 000000011111111111111110 1110 011
Q ss_pred c-HHHHHHHhccCCccchHHHHHHHHhhh--CCC-CCCccCCCCCCCEEEEecCCCCCCChH-HHHHhhccCCCccEEEe
Q 024971 145 T-EELVEKILQPGLETGAADVFLEFICYS--GGP-LPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVL 219 (260)
Q Consensus 145 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~ 219 (260)
. ++....................+.... ... .....+.++++|+++++|.+|...++. ..+.... +.+.+.++
T Consensus 282 ~~d~ll~~~~~y~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~i~vP~~v~~g~~D~~~~p~~~~~~~~~--~~~~~~~~ 359 (388)
T 4i19_A 282 DRDLMLTHISLFWFTATGGSAAQAHYELKPFLPITSLIGRSPTLDVPMGVAVYPGALFQPVRSLAERDFK--QIVHWAEL 359 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHTGGGCTTTCCBCCCCCBCSCEEEEECTBCSSCCCHHHHHHHBT--TEEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHhhcccccccccccCCCCCCCEEEEeCCcccccccHHHHHHhCC--CeEEEEEC
Confidence 1 122211110000011111111111111 110 012356789999999999999655444 3333321 22577889
Q ss_pred CCCCCCcchhchhHHHHHHHHhhhhcc
Q 024971 220 PNVGHCPQVSLYLSLSSACLHTLSYLH 246 (260)
Q Consensus 220 ~~~gH~~~~~~p~~~~~~i~~~l~~~~ 246 (260)
+++||++++|+|+.+++.|.+|++.+.
T Consensus 360 ~~gGHf~~~E~Pe~~~~~l~~fl~~~~ 386 (388)
T 4i19_A 360 DRGGHFSAMEEPDLFVDDLRTFNRTLK 386 (388)
T ss_dssp SSCBSSHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCcCccchhcHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998653
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-27 Score=179.88 Aligned_cols=237 Identities=12% Similarity=0.062 Sum_probs=139.1
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCC--CCccHHHHHH-HHHHHHH----hhcCCceEEEEeChhhHHHHHHHhhCcc-
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDK--PFYTFETWAS-QLNDFCK----DVVKDQAFFICNSIGGLVGLQAAVMEPE- 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~----~~~~~~~~lvGhS~Gg~~a~~~a~~~p~- 76 (260)
+||+|+++|+||||.|+.......... ..++++++++ |+.++++ .++.++++++||||||.+++.+|.++|+
T Consensus 90 ~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~ 169 (377)
T 1k8q_A 90 AGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKL 169 (377)
T ss_dssp TTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHH
T ss_pred CCCCEEEecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchh
Confidence 479999999999999986321000000 1578999998 8877655 5678899999999999999999999999
Q ss_pred --chhhceEeccCccccccCCCCCCCcchh----HHHhhhh------hhhhhHHHHHHHhcCh----HHHHHHHHhcc-C
Q 024971 77 --ICRGMILLNISLRMLHIKKQPWYGRPLI----RSFQNLL------RNTAAGKLFYKMVATS----ESVRNILCQCY-N 139 (260)
Q Consensus 77 --~v~~lvl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~ 139 (260)
+|+++|+++|......... .. .... ..+.... ........+....... ........... .
T Consensus 170 ~~~v~~lvl~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (377)
T 1k8q_A 170 AKRIKTFYALAPVATVKYTET-LI--NKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGF 246 (377)
T ss_dssp HTTEEEEEEESCCSCCSSCCS-GG--GGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCC
T ss_pred hhhhhEEEEeCCchhcccchh-HH--HHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCC
Confidence 8999999998754321100 00 0000 0000000 0000011111011000 00110000000 0
Q ss_pred CCCcccHHHHHHHhccCCccchHHHHHHHH---------------------hhhCCCCCCccCCCCCCCEEEEecCCCCC
Q 024971 140 DTSQVTEELVEKILQPGLETGAADVFLEFI---------------------CYSGGPLPEELLPQVKCPVLIAWGDKDPW 198 (260)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 198 (260)
.......+....+...............+. .+.........+.++++|+|+++|++|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 326 (377)
T 1k8q_A 247 DTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLL 326 (377)
T ss_dssp CGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSS
T ss_pred CcccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcc
Confidence 011111122222222111111111111110 11111111334788999999999999999
Q ss_pred CChHHHHHhhccCCCcc-EEEeCCCCCCcch---hchhHHHHHHHHhhhh
Q 024971 199 EPIELGRAYGNFDSVED-FIVLPNVGHCPQV---SLYLSLSSACLHTLSY 244 (260)
Q Consensus 199 ~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~---~~p~~~~~~i~~~l~~ 244 (260)
+|++..+.+.+.+++.+ +++++++||+.++ ++|+++.+.|.+|++.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 327 ADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp SCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred cCHHHHHHHHHhCcCcccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 99999999999999887 9999999999996 8999999999999864
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-27 Score=173.52 Aligned_cols=188 Identities=16% Similarity=0.134 Sum_probs=135.8
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhh---Cc---cc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM---EP---EI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~---~p---~~ 77 (260)
++||+|+++|+||||.|.... ..++++++++|+.++++.++.++++++|||+||.+++.+|.+ +| ++
T Consensus 64 ~~g~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~ 136 (270)
T 3llc_A 64 SLGVGAIRFDYSGHGASGGAF-------RDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQ 136 (270)
T ss_dssp HHTCEEEEECCTTSTTCCSCG-------GGCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCE
T ss_pred hCCCcEEEeccccCCCCCCcc-------ccccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccc
Confidence 458999999999999998765 467999999999999999999999999999999999999999 99 89
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhcc--------CCCCcccHHHH
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY--------NDTSQVTEELV 149 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 149 (260)
|+++|++++.......... ... ............. ...........
T Consensus 137 v~~~il~~~~~~~~~~~~~------------~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (270)
T 3llc_A 137 VSGMVLIAPAPDFTSDLIE------------PLL--------------GDRERAELAENGYFEEVSEYSPEPNIFTRALM 190 (270)
T ss_dssp EEEEEEESCCTTHHHHTTG------------GGC--------------CHHHHHHHHHHSEEEECCTTCSSCEEEEHHHH
T ss_pred cceeEEecCcccchhhhhh------------hhh--------------hhhhhhhhhccCcccChhhcccchhHHHHHHH
Confidence 9999999997533211000 000 0000000000000 00001111111
Q ss_pred HHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC--ccEEEeCCCCCCcc
Q 024971 150 EKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV--EDFIVLPNVGHCPQ 227 (260)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~ 227 (260)
. .... ......+.++++|+++++|++|.+++.+..+.+.+.+++ +++++++++||+..
T Consensus 191 ~----------------~~~~----~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 250 (270)
T 3llc_A 191 E----------------DGRA----NRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLS 250 (270)
T ss_dssp H----------------HHHH----TCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCC
T ss_pred h----------------hhhh----hhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCccccc
Confidence 1 1111 112456778899999999999999999999999988887 89999999999544
Q ss_pred -hhchhHHHHHHHHhhhh
Q 024971 228 -VSLYLSLSSACLHTLSY 244 (260)
Q Consensus 228 -~~~p~~~~~~i~~~l~~ 244 (260)
.+.++++.+.|.+|++.
T Consensus 251 ~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 251 RPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp SHHHHHHHHHHHHHHHC-
T ss_pred ccccHHHHHHHHHHHhcC
Confidence 57899999999999864
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-27 Score=166.57 Aligned_cols=150 Identities=21% Similarity=0.301 Sum_probs=130.4
Q ss_pred CCccEEEEEcCCCCCCC---CCCCCCCCCCCCCc-cHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGYGYS---DKPNPRDFFDKPFY-TFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
.+||+|+++|+||+|.| ..+. ..+ +++++++++..+++.++.++++++|||+||.+++.++.++|++++
T Consensus 54 ~~G~~v~~~d~~g~g~s~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~ 126 (207)
T 3bdi_A 54 KIGYNVYAPDYPGFGRSASSEKYG-------IDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVD 126 (207)
T ss_dssp TTTEEEEEECCTTSTTSCCCTTTC-------CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEE
T ss_pred hCCCeEEEEcCCcccccCcccCCC-------CCcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhhe
Confidence 35799999999999999 5544 455 899999999999999999999999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++++++|..... .
T Consensus 127 ~~v~~~~~~~~~-----------~-------------------------------------------------------- 139 (207)
T 3bdi_A 127 GIIAVAPAWVES-----------L-------------------------------------------------------- 139 (207)
T ss_dssp EEEEESCCSCGG-----------G--------------------------------------------------------
T ss_pred EEEEeCCccccc-----------h--------------------------------------------------------
Confidence 999999863110 0
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
...+.++++|+++++|++|.+++.+..+.+.+..++.++++++++||..+.++++++.+.|.
T Consensus 140 ------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~ 201 (207)
T 3bdi_A 140 ------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITV 201 (207)
T ss_dssp ------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred ------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcCCceEEEeCCCCCCccccCHHHHHHHHH
Confidence 01234567999999999999999999999888888999999999999999999999999999
Q ss_pred Hhhhhc
Q 024971 240 HTLSYL 245 (260)
Q Consensus 240 ~~l~~~ 245 (260)
+|++.+
T Consensus 202 ~fl~~~ 207 (207)
T 3bdi_A 202 DFLRNL 207 (207)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999753
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=178.55 Aligned_cols=191 Identities=15% Similarity=0.141 Sum_probs=135.3
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
.+||+|+++|+||||.|.... ..+++.++++|+.++++.+ +.++++++|||+||.+++.+|.++|++|+
T Consensus 73 ~~G~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~ 145 (270)
T 3pfb_A 73 DENIASVRFDFNGHGDSDGKF-------ENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIK 145 (270)
T ss_dssp HTTCEEEEECCTTSTTSSSCG-------GGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEE
T ss_pred hCCcEEEEEccccccCCCCCC-------CccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhc
Confidence 358999999999999998754 4678999999999999998 66799999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|+++|....... ....... ........... .... ...
T Consensus 146 ~~v~~~~~~~~~~~------------~~~~~~~-----------------------~~~~~~~~~~~-----~~~~-~~~ 184 (270)
T 3pfb_A 146 KVVLLAPAATLKGD------------ALEGNTQ-----------------------GVTYNPDHIPD-----RLPF-KDL 184 (270)
T ss_dssp EEEEESCCTHHHHH------------HHHTEET-----------------------TEECCTTSCCS-----EEEE-TTE
T ss_pred EEEEeccccccchh------------hhhhhhh-----------------------ccccCcccccc-----cccc-ccc
Confidence 99999987532110 0000000 00000000000 0000 000
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
.....+..... .......+.++++|+++++|++|.+++.+..+.+.+..+++++++++++||+++.++++++.+.|.
T Consensus 185 ~~~~~~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 261 (270)
T 3pfb_A 185 TLGGFYLRIAQ---QLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTT 261 (270)
T ss_dssp EEEHHHHHHHH---HCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEETTCCTTCCTHHHHHHHHHHH
T ss_pred ccchhHhhccc---ccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCCCCeEEEcCCCCcccCccchHHHHHHHH
Confidence 00000111000 011134567789999999999999999999999998899999999999999999999999999999
Q ss_pred Hhhhhc
Q 024971 240 HTLSYL 245 (260)
Q Consensus 240 ~~l~~~ 245 (260)
+|++..
T Consensus 262 ~fl~~~ 267 (270)
T 3pfb_A 262 DFLQNN 267 (270)
T ss_dssp HHHC--
T ss_pred HHHhhc
Confidence 999764
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-28 Score=185.54 Aligned_cols=228 Identities=14% Similarity=0.130 Sum_probs=140.6
Q ss_pred cc---EEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc----CCc--eEEEEeChhhHHHHHHHhhCcc
Q 024971 6 SH---RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV----KDQ--AFFICNSIGGLVGLQAAVMEPE 76 (260)
Q Consensus 6 ~~---~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~lvGhS~Gg~~a~~~a~~~p~ 76 (260)
|| +|+++|+||||.|+.+..... ...++++++++|+.++++.+. .++ ++++||||||.+++.+|.++|+
T Consensus 83 G~~~~~vi~~D~~G~G~S~~~~~~~~--~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 160 (398)
T 2y6u_A 83 NYAIDKVLLIDQVNHGDSAVRNRGRL--GTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPN 160 (398)
T ss_dssp TEEEEEEEEECCTTSHHHHHHTTTTB--CSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTT
T ss_pred CcceeEEEEEcCCCCCCCCCCCcccc--CCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCch
Confidence 78 999999999999976432100 136799999999999999854 344 9999999999999999999999
Q ss_pred chhhceEeccCccccccC-----CCCCCC----cchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHH
Q 024971 77 ICRGMILLNISLRMLHIK-----KQPWYG----RPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEE 147 (260)
Q Consensus 77 ~v~~lvl~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (260)
+|+++|+++|........ ...... ......+....... +.........+..... .......
T Consensus 161 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~ 230 (398)
T 2y6u_A 161 LFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDH---------FANESEYVKYMRNGSF-FTNAHSQ 230 (398)
T ss_dssp SCSEEEEESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCE---------ESSHHHHHHHHHHTST-TTTSCHH
T ss_pred heeEEEEeccccccccccccccccccccccccchhhHHHhhhhcccc---------CCCHHHHHHHhhcCcc-cccCCHH
Confidence 999999999976542100 000000 00111111000000 0011111111111100 0111222
Q ss_pred HHHHHhccCC-------------c--cchHHHHHHHHhhh-CCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC
Q 024971 148 LVEKILQPGL-------------E--TGAADVFLEFICYS-GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD 211 (260)
Q Consensus 148 ~~~~~~~~~~-------------~--~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 211 (260)
....+..... . .........+.... ........+.++++|+|+|+|++|.++|++..+.+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~ 310 (398)
T 2y6u_A 231 ILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL 310 (398)
T ss_dssp HHHHHHHHHEEC--------CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHC
T ss_pred HHHHHHHhcCccccccccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhC
Confidence 2222211000 0 00000000000000 000012456788999999999999999999999999999
Q ss_pred CCccEEEeCCCCCCcchhchhHHHHHHHHhhhhc
Q 024971 212 SVEDFIVLPNVGHCPQVSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 212 ~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~~ 245 (260)
+++++++++++||+++.++|+++.+.|.+|++..
T Consensus 311 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 344 (398)
T 2y6u_A 311 QNYHLDVIPGGSHLVNVEAPDLVIERINHHIHEF 344 (398)
T ss_dssp SSEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCccchhcCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999755
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.9e-27 Score=171.87 Aligned_cols=190 Identities=13% Similarity=0.083 Sum_probs=114.0
Q ss_pred CC-CccEEEEEcCCCC-CCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 3 LA-KSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 3 L~-~~~~v~~~D~~G~-G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
|+ +||+|+++|+||| |.|+.+. ..++++++++|+..+++.+ +.++++++||||||.+|+.+|.+ | +
T Consensus 58 L~~~G~~Vi~~D~rGh~G~S~~~~-------~~~~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~ 128 (305)
T 1tht_A 58 LSTNGFHVFRYDSLHHVGLSSGSI-------DEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-E 128 (305)
T ss_dssp HHTTTCCEEEECCCBCC---------------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-C
T ss_pred HHHCCCEEEEeeCCCCCCCCCCcc-------cceehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-C
Confidence 53 5899999999999 9998654 4578999999998888765 77899999999999999999988 7 8
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcc-cHHHHHHHhccC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV-TEELVEKILQPG 156 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 156 (260)
|+++|++++..... ............. .......... ... .... ............
T Consensus 129 v~~lvl~~~~~~~~-------------~~~~~~~~~~~~~-------~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~ 185 (305)
T 1tht_A 129 LSFLITAVGVVNLR-------------DTLEKALGFDYLS-------LPIDELPNDL--DFE-GHKLGSEVFVRDCFEHH 185 (305)
T ss_dssp CSEEEEESCCSCHH-------------HHHHHHHSSCGGG-------SCGGGCCSEE--EET-TEEEEHHHHHHHHHHTT
T ss_pred cCEEEEecCchhHH-------------HHHHHHhhhhhhh-------cchhhCcccc--ccc-ccccCHHHHHHHHHhcc
Confidence 99999987643110 0000000000000 0000000000 000 0000 000111100000
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC--CCccEEEeCCCCCCcchhchhHH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD--SVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
.. ... .....+.++++|+|+++|++|.++|++..+.+.+.+ +++++++++++||.++ ++|+.+
T Consensus 186 ~~--~~~------------~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~ 250 (305)
T 1tht_A 186 WD--TLD------------STLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVL 250 (305)
T ss_dssp CS--SHH------------HHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHH
T ss_pred cc--chh------------hHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHH
Confidence 00 000 012346788999999999999999999999988875 5789999999999986 888765
Q ss_pred HHHHH
Q 024971 235 SSACL 239 (260)
Q Consensus 235 ~~~i~ 239 (260)
.+.+.
T Consensus 251 ~~fl~ 255 (305)
T 1tht_A 251 RNFYQ 255 (305)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.5e-27 Score=170.61 Aligned_cols=200 Identities=16% Similarity=0.076 Sum_probs=130.6
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-cCCceEEEEeChhhHHHHHHHhhCccchh-
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVMEPEICR- 79 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~- 79 (260)
.|+++|+|+++|+||||.|.... ..++++++++++.++++.+ +.++++|+||||||.+|+.+|.++|+++.
T Consensus 73 ~L~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~a~~~~~~l~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~ 145 (280)
T 3qmv_A 73 RLGDEVAVVPVQLPGRGLRLRER-------PYDTMEPLAEAVADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRGAP 145 (280)
T ss_dssp HHCTTEEEEECCCTTSGGGTTSC-------CCCSHHHHHHHHHHHHHHTTCSSSEEEEEETHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCCceEEEEeCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCHhHHHHHHHHHHHHHcCCC
Confidence 46779999999999999997654 4679999999999999999 78899999999999999999999999887
Q ss_pred ---hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 80 ---GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 80 ---~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+++++++.......... .. ......... .+............ ...+
T Consensus 146 ~~~~l~l~~~~~p~~~~~~~--~~---------~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~---- 194 (280)
T 3qmv_A 146 RPRHLFVSGSRAPHLYGDRA--DH---------TLSDTALRE--------------VIRDLGGLDDADTL--GAAY---- 194 (280)
T ss_dssp CCSCEEEESCCCGGGCSCCC--GG---------GSCHHHHHH--------------HHHHHTCCC---------------
T ss_pred CceEEEEECCCCCCCcCccc--cc---------ccCHHHHHH--------------HHHHhCCCChhhhc--CHHH----
Confidence 77777654322111000 00 000000000 00000000000000 0000
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCCCCCcch--hchhH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQV--SLYLS 233 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~--~~p~~ 233 (260)
.......+........... ...+..+++|+++++|++|.+++.+..+.+.+..++ .++++++ +||+.+. ++|++
T Consensus 195 -~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-ggH~~~~~~~~~~~ 271 (280)
T 3qmv_A 195 -FDRRLPVLRADLRACERYD-WHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLP-GNHFFLNGGPSRDR 271 (280)
T ss_dssp -CCTTHHHHHHHHHHHHTCC-CCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEE-EETTGGGSSHHHHH
T ss_pred -HHHHHHHHHHHHHHHHhcc-ccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEec-CCCeEEcCchhHHH
Confidence 0001111111111111111 223678899999999999999999999988888776 4677777 5999999 99999
Q ss_pred HHHHHHHhh
Q 024971 234 LSSACLHTL 242 (260)
Q Consensus 234 ~~~~i~~~l 242 (260)
+++.|.+||
T Consensus 272 ~~~~i~~~L 280 (280)
T 3qmv_A 272 LLAHLGTEL 280 (280)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhhC
Confidence 999999875
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=181.64 Aligned_cols=206 Identities=14% Similarity=0.098 Sum_probs=129.8
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCcc-chhhceEe
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMILL 84 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~ 84 (260)
||+|+++|+||||.|..+. ..+++++++++.++++.+ .++++++||||||.+++.+|.++|+ +|+++|++
T Consensus 65 g~~vi~~D~~G~G~s~~~~--------~~~~~~~~~~l~~~~~~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~ 135 (302)
T 1pja_A 65 GTVVTVLDLFDGRESLRPL--------WEQVQGFREAVVPIMAKA-PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISL 135 (302)
T ss_dssp TCCEEECCSSCSGGGGSCH--------HHHHHHHHHHHHHHHHHC-TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEE
T ss_pred CcEEEEeccCCCccchhhH--------HHHHHHHHHHHHHHhhcC-CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEE
Confidence 7999999999999997643 368899999999999888 6899999999999999999999999 79999999
Q ss_pred ccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHH
Q 024971 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (260)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (260)
+++...... .. ..+...... .......................+.... ....... . .....
T Consensus 136 ~~~~~~~~~------~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~---~~~~~- 196 (302)
T 1pja_A 136 SSPQMGQYG------DT---DYLKWLFPT-SMRSNLYRICYSPWGQEFSICNYWHDPH-HDDLYLN----A---SSFLA- 196 (302)
T ss_dssp SCCTTCBCS------CC---HHHHHHCTT-CCHHHHHHHHTSTTGGGSTGGGGBCCTT-CHHHHHH----H---CSSHH-
T ss_pred CCCcccccc------cc---hhhhhHHHH-HHHHHHhhccchHHHHHhhhhhcccChh-hhhhhhc----c---chHHH-
Confidence 987532110 00 000000000 0000000000000000000000000000 0000000 0 00000
Q ss_pred HHHHHhhhCCC----CCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC---------------------------
Q 024971 165 FLEFICYSGGP----LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV--------------------------- 213 (260)
Q Consensus 165 ~~~~~~~~~~~----~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--------------------------- 213 (260)
........ +..+.+.+++ |+++++|++|.+++++..+.+.+..++
T Consensus 197 ---~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 272 (302)
T 1pja_A 197 ---LINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGA 272 (302)
T ss_dssp ---HHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHHTTTTSHHHHHHTTC
T ss_pred ---HhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhhhhhhhchhhHhhcCC
Confidence 00000000 0133567889 999999999999999888888766666
Q ss_pred ccEEEeCCCCCCcchhchhHHHHHHHHhhh
Q 024971 214 EDFIVLPNVGHCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 214 ~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~ 243 (260)
+++++++++||+++.|+|+++++.|.+|++
T Consensus 273 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 302 (302)
T 1pja_A 273 IVRCPMAGISHTAWHSNRTLYETCIEPWLS 302 (302)
T ss_dssp EEEEECSSCCTTTTTSCHHHHHHHTGGGCC
T ss_pred eEEEEecCccccccccCHHHHHHHHHHhcC
Confidence 899999999999999999999999999874
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=166.98 Aligned_cols=148 Identities=20% Similarity=0.180 Sum_probs=126.7
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHH--HHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA--SQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
+||+|+++|+||+|.|.... ...++++.+ +++..+++.++.++++++|||+||.+++.++.++|++++++|
T Consensus 60 ~G~~v~~~d~~g~g~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v 132 (210)
T 1imj_A 60 AGYRAVAIDLPGLGHSKEAA-------APAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFV 132 (210)
T ss_dssp TTCEEEEECCTTSGGGTTSC-------CSSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEE
T ss_pred CCCeEEEecCCCCCCCCCCC-------CcchhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEE
Confidence 57999999999999998765 344566666 899999999999999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchH
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
+++|..... .
T Consensus 133 ~~~~~~~~~----------------------------------------------------~------------------ 142 (210)
T 1imj_A 133 PVAPICTDK----------------------------------------------------I------------------ 142 (210)
T ss_dssp EESCSCGGG----------------------------------------------------S------------------
T ss_pred EeCCCcccc----------------------------------------------------c------------------
Confidence 999863210 0
Q ss_pred HHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhh
Q 024971 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTL 242 (260)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l 242 (260)
....+.++++|+++++|++|. ++.+..+.+ +..++.++++++++||+.+.++|+++.+.|.+|+
T Consensus 143 --------------~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl 206 (210)
T 1imj_A 143 --------------NAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFL 206 (210)
T ss_dssp --------------CHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTSSSEEEEEETTCCTTHHHHCHHHHHHHHHHHH
T ss_pred --------------cchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhCCCCCEEEecCCCcchhhcCHHHHHHHHHHHH
Confidence 012234568999999999999 999999989 8888999999999999999999999999999999
Q ss_pred hhc
Q 024971 243 SYL 245 (260)
Q Consensus 243 ~~~ 245 (260)
+.+
T Consensus 207 ~~~ 209 (210)
T 1imj_A 207 QGL 209 (210)
T ss_dssp HTC
T ss_pred Hhc
Confidence 764
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=171.58 Aligned_cols=195 Identities=15% Similarity=0.148 Sum_probs=132.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCc-cHHHHHHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFY-TFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
+||+|+++|+||||.|+.... ... +++++++|+.++++.+... +++++||||||.+++.+|.++|++++++
T Consensus 48 ~G~~v~~~d~~g~g~s~~~~~------~~~~~~~~~~~d~~~~i~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~ 121 (251)
T 3dkr_A 48 SGYGVYVPLFSGHGTVEPLDI------LTKGNPDIWWAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGG 121 (251)
T ss_dssp TTCEEEECCCTTCSSSCTHHH------HHHCCHHHHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHCSSCCEEE
T ss_pred CCCEEEecCCCCCCCCChhhh------cCcccHHHHHHHHHHHHHHHHHhcCCeEEEEechHHHHHHHHHHhCccceeeE
Confidence 689999999999999965431 233 8889999999999888755 9999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
++++|..... ........ .....+...... .. ........... .
T Consensus 122 i~~~p~~~~~---------~~~~~~~~------~~~~~~~~~~~~--------------~~--~~~~~~~~~~~-----~ 165 (251)
T 3dkr_A 122 VFSSPILPGK---------HHLVPGFL------KYAEYMNRLAGK--------------SD--ESTQILAYLPG-----Q 165 (251)
T ss_dssp ESSCCCCTTC---------BCHHHHHH------HHHHHHHHHHTC--------------CC--CHHHHHHHHHH-----H
T ss_pred EEecchhhcc---------chhhHHHH------HHHHHHHhhccc--------------Cc--chhhHHhhhHH-----H
Confidence 9998875321 00011100 000000000000 00 00111100000 0
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-c--cEEEeCCCCCCcchhc-hhHHHHH
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-E--DFIVLPNVGHCPQVSL-YLSLSSA 237 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~--~~~~~~~~gH~~~~~~-p~~~~~~ 237 (260)
...+...... ....+.++++|+++++|++|.+++.+..+.+.+.+++ . ++++++++||+.+.+. ++++.+.
T Consensus 166 ~~~~~~~~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 240 (251)
T 3dkr_A 166 LAAIDQFATT-----VAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEED 240 (251)
T ss_dssp HHHHHHHHHH-----HHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHH
T ss_pred HHHHHHHHHH-----HhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHH
Confidence 0011111100 1345677889999999999999999988888877655 4 8999999999998885 9999999
Q ss_pred HHHhhhhcc
Q 024971 238 CLHTLSYLH 246 (260)
Q Consensus 238 i~~~l~~~~ 246 (260)
|.+|++.+.
T Consensus 241 i~~fl~~~~ 249 (251)
T 3dkr_A 241 VIAFMQQEN 249 (251)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhhc
Confidence 999998764
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-27 Score=169.88 Aligned_cols=198 Identities=17% Similarity=0.160 Sum_probs=132.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc--CCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
+||+|+++|+||+|.|.... ...+++++++|+.++++.+. .++++++|||+||.+++.+|.++|+ |+++|
T Consensus 66 ~G~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v 137 (270)
T 3rm3_A 66 AGYTVCLPRLKGHGTHYEDM-------ERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIV 137 (270)
T ss_dssp TTCEEEECCCTTCSSCHHHH-------HTCCHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEE
T ss_pred CCCEEEEeCCCCCCCCcccc-------ccCCHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEE
Confidence 48999999999999997643 45789999999999999998 8899999999999999999999999 99999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchH
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
+++|+............. .......... .......... .........
T Consensus 138 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--------------------~~~~~~~~~~---------~~~~~~~~~ 184 (270)
T 3rm3_A 138 PINAAVDIPAIAAGMTGG----GELPRYLDSI--------------------GSDLKNPDVK---------ELAYEKTPT 184 (270)
T ss_dssp EESCCSCCHHHHHHSCC-------CCSEEECC--------------------CCCCSCTTCC---------CCCCSEEEH
T ss_pred EEcceecccccccchhcc----hhHHHHHHHh--------------------CccccccchH---------hhcccccCh
Confidence 999875331100000000 0000000000 0000000000 000000001
Q ss_pred HHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCc--cEEEeCCCCCCcchhch-hHHHHHHH
Q 024971 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE--DFIVLPNVGHCPQVSLY-LSLSSACL 239 (260)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~~p-~~~~~~i~ 239 (260)
..+..+..... .....+.++++|+++++|++|.+++.+..+.+.+.+++. ++++++++||+++.+.+ +++.+.|.
T Consensus 185 ~~~~~~~~~~~--~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 262 (270)
T 3rm3_A 185 ASLLQLARLMA--QTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSL 262 (270)
T ss_dssp HHHHHHHHHHH--HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred hHHHHHHHHHH--HHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHH
Confidence 11111110000 012456778999999999999999999998888887765 89999999999999886 89999999
Q ss_pred Hhhhhc
Q 024971 240 HTLSYL 245 (260)
Q Consensus 240 ~~l~~~ 245 (260)
+|++..
T Consensus 263 ~fl~~~ 268 (270)
T 3rm3_A 263 EFFAKH 268 (270)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999753
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=173.79 Aligned_cols=237 Identities=12% Similarity=0.048 Sum_probs=129.9
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCC-ceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
.||+|+++|+||||.|+.+.. ...++++++++++.++++.++.+ +++++||||||.+++.+|.++|+. .++++
T Consensus 141 ~gf~vv~~DlpG~G~S~~~~~-----~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~-~~~~l 214 (408)
T 3g02_A 141 LPFHLVVPSLPGYTFSSGPPL-----DKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDAC-KAVHL 214 (408)
T ss_dssp CCEEEEEECCTTSTTSCCSCS-----SSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTE-EEEEE
T ss_pred CceEEEEECCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCc-eEEEE
Confidence 589999999999999988652 14689999999999999999997 999999999999999999999764 44444
Q ss_pred eccCccccccCC-CCCCCcchhHHHhhhhh--hhhhHH----------HHHHHhcChHHHHHHHHhc---cCCCCcccHH
Q 024971 84 LNISLRMLHIKK-QPWYGRPLIRSFQNLLR--NTAAGK----------LFYKMVATSESVRNILCQC---YNDTSQVTEE 147 (260)
Q Consensus 84 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 147 (260)
..+......... ...........+..... ....+. .......++..+..++... +.+.....++
T Consensus 215 ~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ 294 (408)
T 3g02_A 215 NFCNMSAPPEGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSET 294 (408)
T ss_dssp SCCCCCCCTTCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHH
T ss_pred eCCCCCCCcccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHH
Confidence 433322211000 00000000001110000 000000 0011111122211111111 1111111122
Q ss_pred HHHHH---hccCCccchHHHHHHHHhhhCCC---CCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCC
Q 024971 148 LVEKI---LQPGLETGAADVFLEFICYSGGP---LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPN 221 (260)
Q Consensus 148 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (260)
..... +...........+.......... .....+..+++|++++.|.+|...+++...+.. .+.+.+.++++
T Consensus 295 ll~~v~~y~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~~~~~~~--~~~~~~~~~~~ 372 (408)
T 3g02_A 295 ILEMVSLYWLTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPRSWIATT--GNLVFFRDHAE 372 (408)
T ss_dssp HHHHHHHHHHTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCCCHHHHGGG--EEEEEEEECSS
T ss_pred HHHHHHHHHhhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccCcHHHHHhc--CCeeEEEECCC
Confidence 22211 11110011111111111000000 000145778999999999999776665443332 23367889999
Q ss_pred CCCCcchhchhHHHHHHHHhhhhccccc
Q 024971 222 VGHCPQVSLYLSLSSACLHTLSYLHTCR 249 (260)
Q Consensus 222 ~gH~~~~~~p~~~~~~i~~~l~~~~~~~ 249 (260)
+||++++|+|+.+++.|.+|++.+.+..
T Consensus 373 gGHf~~lE~Pe~~~~~l~~fl~~~~~~~ 400 (408)
T 3g02_A 373 GGHFAALERPRELKTDLTAFVEQVWQKG 400 (408)
T ss_dssp CBSCHHHHCHHHHHHHHHHHHHHHC---
T ss_pred CcCchhhhCHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999998776544
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=169.19 Aligned_cols=228 Identities=13% Similarity=0.126 Sum_probs=128.7
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh----hcCCceEEEEeChhhHHHHHHHhhC-ccchh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VVKDQAFFICNSIGGLVGLQAAVME-PEICR 79 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~ 79 (260)
+||+|+++|+||||.|.............++++++++|+.++++. ++.++++++||||||.+++.+|.++ |++|+
T Consensus 92 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~ 171 (354)
T 2rau_A 92 NGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIK 171 (354)
T ss_dssp TTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEE
T ss_pred CCCEEEEecCCCCCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccc
Confidence 489999999999999986542100000157889999999999888 4778999999999999999999999 99999
Q ss_pred hceEeccCccccccCCCCC-CCcchhHHHhhhh-h-----hhhhHHHHHHHhcChHHHHHHHHhccCCC----CcccHHH
Q 024971 80 GMILLNISLRMLHIKKQPW-YGRPLIRSFQNLL-R-----NTAAGKLFYKMVATSESVRNILCQCYNDT----SQVTEEL 148 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 148 (260)
++|++++.+.......... ........+.... . ........... ......... .......
T Consensus 172 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 242 (354)
T 2rau_A 172 GLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYA---------LANPDMPSPDPKYKSISDFL 242 (354)
T ss_dssp EEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCEEECSSSTTCTHHHHH---------HHSTTSCCSSTTSSSHHHHH
T ss_pred eEEEecccccccCcccchhhhhhhhHHHhhhhcccccCCCchhhhHHHHHh---------ccccccCccccchhhHHHHH
Confidence 9999977643211100000 0000011111000 0 00000000000 000000000 0000000
Q ss_pred HHHHhcc-C-----CccchHHHHHHHHh---------hhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC
Q 024971 149 VEKILQP-G-----LETGAADVFLEFIC---------YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV 213 (260)
Q Consensus 149 ~~~~~~~-~-----~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 213 (260)
....... . ........+..... .....+....++++++|+|+++|++|.++|. .. ....++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~-~~---~~l~~~ 318 (354)
T 2rau_A 243 MDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIF-DS---KILPSN 318 (354)
T ss_dssp HHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHB-CG---GGSCTT
T ss_pred HHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcccccccccCCCCEEEEecCCCCCCcc-ch---hhhccC
Confidence 0000000 0 00001111111110 0111233567889999999999999986553 22 233477
Q ss_pred ccEEEeCCCCCCcchhc---hhHHHHHHHHhhhhc
Q 024971 214 EDFIVLPNVGHCPQVSL---YLSLSSACLHTLSYL 245 (260)
Q Consensus 214 ~~~~~~~~~gH~~~~~~---p~~~~~~i~~~l~~~ 245 (260)
+++++++++||+++.++ |+++.+.|.+||+..
T Consensus 319 ~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 319 SEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp CEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred ceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 89999999999988765 499999999999754
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-24 Score=157.88 Aligned_cols=190 Identities=11% Similarity=0.050 Sum_probs=123.5
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHh---hCccch
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAV---MEPEIC 78 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~---~~p~~v 78 (260)
|+++|+|+++|+||+|.++.. .++++++++++.++++.+. .++++++||||||.+|+.+|. .+|+++
T Consensus 43 l~~~~~v~~~d~~G~~~~~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v 113 (265)
T 3ils_A 43 LKSDTAVVGLNCPYARDPENM---------NCTHGAMIESFCNEIRRRQPRGPYHLGGWSSGGAFAYVVAEALVNQGEEV 113 (265)
T ss_dssp CSSSEEEEEEECTTTTCGGGC---------CCCHHHHHHHHHHHHHHHCSSCCEEEEEETHHHHHHHHHHHHHHHTTCCE
T ss_pred cCCCCEEEEEECCCCCCCCCC---------CCCHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHhCCCCc
Confidence 678999999999999766543 3689999999999999985 468999999999999999998 667789
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC-------CCCcccHHHHHH
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN-------DTSQVTEELVEK 151 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 151 (260)
+++|++++...... ......... +... +..... ........
T Consensus 114 ~~lvl~~~~~~~~~--------~~~~~~~~~----------~~~~----------~~~~~~~~~~~~~~~~~~~~~---- 161 (265)
T 3ils_A 114 HSLIIIDAPIPQAM--------EQLPRAFYE----------HCNS----------IGLFATQPGASPDGSTEPPSY---- 161 (265)
T ss_dssp EEEEEESCCSSCCC--------CCCCHHHHH----------HHHH----------TTTTTTSSSSCSSSCSCCCTT----
T ss_pred eEEEEEcCCCCCcc--------cccCHHHHH----------HHHH----------HHHhCCCccccccCCHHHHHH----
Confidence 99999988643210 000000000 0000 000000 00000000
Q ss_pred HhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEE-EEecCC---CCCC--------------ChHHHHHhhccCC-
Q 024971 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVL-IAWGDK---DPWE--------------PIELGRAYGNFDS- 212 (260)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l-~i~g~~---D~~~--------------~~~~~~~~~~~~~- 212 (260)
....+........... .....++++|++ +++|++ |..+ +......+.+..+
T Consensus 162 ---------~~~~~~~~~~~~~~~~-~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 231 (265)
T 3ils_A 162 ---------LIPHFTAVVDVMLDYK-LAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPG 231 (265)
T ss_dssp ---------HHHHHHHHHHHTTTCC-CCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTT
T ss_pred ---------HHHHHHHHHHHHHhcC-CCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCCc
Confidence 0111111111111111 223457899988 999999 9877 3333333444443
Q ss_pred -CccEEEeCCCCCCcc--hhchhHHHHHHHHhhh
Q 024971 213 -VEDFIVLPNVGHCPQ--VSLYLSLSSACLHTLS 243 (260)
Q Consensus 213 -~~~~~~~~~~gH~~~--~~~p~~~~~~i~~~l~ 243 (260)
+.++++++|+||+.+ .++|+++++.|.+|++
T Consensus 232 ~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 232 ASFDIVRADGANHFTLMQKEHVSIISDLIDRVMA 265 (265)
T ss_dssp CCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHTC
T ss_pred cceeEEEcCCCCcceeeChhhHHHHHHHHHHHhC
Confidence 789999999999999 8999999999999873
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-25 Score=149.89 Aligned_cols=144 Identities=15% Similarity=0.145 Sum_probs=118.9
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
.||.|+++|+||+|.|+... ...++.+.++++.+.++... .++++++||||||.+++.++.++| ++++|+
T Consensus 32 ~g~~v~~~d~~g~g~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~ 102 (176)
T 2qjw_A 32 LGWTHERPDFTDLDARRDLG-------QLGDVRGRLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVP--TRALFL 102 (176)
T ss_dssp TTCEEECCCCHHHHTCGGGC-------TTCCHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHTTSC--CSEEEE
T ss_pred CCCEEEEeCCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhcCCCCCEEEEEECHHHHHHHHHHHhcC--hhheEE
Confidence 58999999999999987543 34577888888888887775 579999999999999999999998 999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHH
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (260)
++|...... +
T Consensus 103 ~~~~~~~~~-----~----------------------------------------------------------------- 112 (176)
T 2qjw_A 103 MVPPTKMGP-----L----------------------------------------------------------------- 112 (176)
T ss_dssp ESCCSCBTT-----B-----------------------------------------------------------------
T ss_pred ECCcCCccc-----c-----------------------------------------------------------------
Confidence 998743210 0
Q ss_pred HHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhh
Q 024971 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~ 243 (260)
..+.++++|+++++|++|.++|.+..+.+.+.. +++++++ ++||.. .++++++.+.+.+|++
T Consensus 113 ---------------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~-~~~H~~-~~~~~~~~~~i~~fl~ 174 (176)
T 2qjw_A 113 ---------------PALDAAAVPISIVHAWHDELIPAADVIAWAQAR-SARLLLV-DDGHRL-GAHVQAASRAFAELLQ 174 (176)
T ss_dssp ---------------CCCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-TCEEEEE-SSCTTC-TTCHHHHHHHHHHHHH
T ss_pred ---------------CcccccCCCEEEEEcCCCCccCHHHHHHHHHhC-CceEEEe-CCCccc-cccHHHHHHHHHHHHH
Confidence 004567899999999999999999888877766 6888899 899997 4889999999999997
Q ss_pred hc
Q 024971 244 YL 245 (260)
Q Consensus 244 ~~ 245 (260)
.+
T Consensus 175 ~l 176 (176)
T 2qjw_A 175 SL 176 (176)
T ss_dssp TC
T ss_pred hC
Confidence 53
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=150.35 Aligned_cols=146 Identities=20% Similarity=0.211 Sum_probs=112.4
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
+||+|+++|+||+|.|..... ......+++.+.+..+.+.++.++++++|||+||.+++.++ .+| +++++|++
T Consensus 62 ~g~~v~~~d~~g~g~s~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~ 134 (208)
T 3trd_A 62 LGLKTVRFNFRGVGKSQGRYD-----NGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISV 134 (208)
T ss_dssp TTCEEEEECCTTSTTCCSCCC-----TTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEE
T ss_pred CCCEEEEEecCCCCCCCCCcc-----chHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEe
Confidence 589999999999999987632 12223334444444444444567999999999999999999 677 89999999
Q ss_pred ccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHH
Q 024971 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (260)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (260)
++....
T Consensus 135 ~~~~~~-------------------------------------------------------------------------- 140 (208)
T 3trd_A 135 APPVFY-------------------------------------------------------------------------- 140 (208)
T ss_dssp SCCTTS--------------------------------------------------------------------------
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 986300
Q ss_pred HHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCCCCCcchhchhHHHHHHHHhhh
Q 024971 165 FLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~ 243 (260)
.....+..+++|+++++|++|.+++.+..+.+.+..++ .++++++++||+...+. +++.+.|.+|++
T Consensus 141 -----------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl~ 208 (208)
T 3trd_A 141 -----------EGFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGRL-IELRELLVRNLA 208 (208)
T ss_dssp -----------GGGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTCH-HHHHHHHHHHHC
T ss_pred -----------CCchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccccH-HHHHHHHHHHhC
Confidence 00123445689999999999999999999988877666 89999999999988765 889999988873
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=154.83 Aligned_cols=146 Identities=16% Similarity=0.120 Sum_probs=118.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-----CceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+||.|+++|+||+|.|.... ..+...+ +|+.++++.+.. ++++++|||+||.+++.++.++|+ +
T Consensus 77 ~~G~~v~~~d~~g~G~s~~~~--------~~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v 146 (249)
T 2i3d_A 77 KRGFTTLRFNFRSIGRSQGEF--------DHGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-I 146 (249)
T ss_dssp HTTCEEEEECCTTSTTCCSCC--------CSSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-E
T ss_pred HCCCEEEEECCCCCCCCCCCC--------CCccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-c
Confidence 358999999999999998754 2244544 777777776632 379999999999999999999998 9
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++|+++|.....
T Consensus 147 ~~~v~~~~~~~~~------------------------------------------------------------------- 159 (249)
T 2i3d_A 147 EGFMSIAPQPNTY------------------------------------------------------------------- 159 (249)
T ss_dssp EEEEEESCCTTTS-------------------------------------------------------------------
T ss_pred cEEEEEcCchhhh-------------------------------------------------------------------
Confidence 9999999864210
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-----CccEEEeCCCCCCcchhchhH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-----VEDFIVLPNVGHCPQVSLYLS 233 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~p~~ 233 (260)
....+.++++|+++++|++|.+++.+..+.+.+.++ ++++++++++||... +.+++
T Consensus 160 ------------------~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~ 220 (249)
T 2i3d_A 160 ------------------DFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDE 220 (249)
T ss_dssp ------------------CCTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHH
T ss_pred ------------------hhhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHH
Confidence 012356778999999999999999998888777655 689999999999987 78999
Q ss_pred HHHHHHHhhhhc
Q 024971 234 LSSACLHTLSYL 245 (260)
Q Consensus 234 ~~~~i~~~l~~~ 245 (260)
+.+.+.+|++..
T Consensus 221 ~~~~i~~fl~~~ 232 (249)
T 2i3d_A 221 LMGECEDYLDRR 232 (249)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999754
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=154.10 Aligned_cols=173 Identities=12% Similarity=0.047 Sum_probs=123.0
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCC----CCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFF----DKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
+||.|+++|+||+|.|......... .....++++.++|+.++++.+ +.++++++|||+||.+++.++.++|+.
T Consensus 50 ~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~ 129 (238)
T 1ufo_A 50 RGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRP 129 (238)
T ss_dssp GTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEecCCCCccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCc
Confidence 4799999999999999775421000 000014677788888777775 457899999999999999999999998
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
+.+++++++........ . .. ..+.+ ..
T Consensus 130 ~~~~~~~~~~~~~~~~~------~-~~--------------------------------------~~~~~-~~------- 156 (238)
T 1ufo_A 130 RGVLAFIGSGFPMKLPQ------G-QV--------------------------------------VEDPG-VL------- 156 (238)
T ss_dssp SCEEEESCCSSCCCCCT------T-CC--------------------------------------CCCHH-HH-------
T ss_pred ceEEEEecCCccchhhh------h-hc--------------------------------------cCCcc-cc-------
Confidence 99999888764221000 0 00 00000 00
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCC-CCCEEEEecCCCCCCChHHHHHhhccCC------CccEEEeCCCCCCcchhc
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAYGNFDS------VEDFIVLPNVGHCPQVSL 230 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~~~ 230 (260)
.+ . .......+.++ ++|+++++|++|.++|.+..+.+.+..+ ++++++++++||..+.+.
T Consensus 157 ------~~----~---~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 223 (238)
T 1ufo_A 157 ------AL----Y---QAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLM 223 (238)
T ss_dssp ------HH----H---HSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHH
T ss_pred ------hh----h---cCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHH
Confidence 00 0 01113345667 8999999999999999998888877766 789999999999999999
Q ss_pred hhHHHHHHHHhhh
Q 024971 231 YLSLSSACLHTLS 243 (260)
Q Consensus 231 p~~~~~~i~~~l~ 243 (260)
++++.+.|.++++
T Consensus 224 ~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 224 ARVGLAFLEHWLE 236 (238)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9888888887774
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-24 Score=152.22 Aligned_cols=197 Identities=12% Similarity=0.092 Sum_probs=110.8
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC---CceEEEEeChhhHHHHHHHhhCcc--
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPE-- 76 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~-- 76 (260)
.|+++|+|+++|+||||.|+.+. .+++.+.+..+++.++. ++++|+||||||.+|+.+|.+.++
T Consensus 35 ~L~~~~~vi~~Dl~GhG~S~~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~ 103 (242)
T 2k2q_B 35 FLQGECEMLAAEPPGHGTNQTSA-----------IEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREG 103 (242)
T ss_dssp HHCCSCCCEEEECCSSCCSCCCT-----------TTHHHHHHHHTTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHH
T ss_pred hCCCCeEEEEEeCCCCCCCCCCC-----------cCCHHHHHHHHHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcC
Confidence 46788999999999999996532 23445555555566665 689999999999999999987321
Q ss_pred -chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhcc
Q 024971 77 -ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (260)
Q Consensus 77 -~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
...++++.+........ . ......... +..... ............ .... .
T Consensus 104 ~~p~~v~l~~~~~~~~~~--~-~~~~~~~~~-------------~~~~~~----------~~~~~~~~~~~~--~~~~-~ 154 (242)
T 2k2q_B 104 IFPQAVIISAIQPPHIQR--K-KVSHLPDDQ-------------FLDHII----------QLGGMPAELVEN--KEVM-S 154 (242)
T ss_dssp CSSCSEEEEEEECSCCCS--C-CCSSCTTHH-------------HHHTTC----------CTTCCCCTTTHH--HHTT-T
T ss_pred CCCCEEEEECCCCCCCCc--c-cccCCCHHH-------------HHHHHH----------HhCCCChHHhcC--HHHH-H
Confidence 12233433321110000 0 000000000 000000 000000000000 0000 0
Q ss_pred CCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHH
Q 024971 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
.........+. ...... ...+.++++|+++++|++|..++ .....+.+..++.+++++++ ||+++.|+|++++
T Consensus 155 ~~~~~~~~~~~----~~~~~~-~~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~-gH~~~~e~p~~~~ 227 (242)
T 2k2q_B 155 FFLPSFRSDYR----ALEQFE-LYDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAKDITFHQFDG-GHMFLLSQTEEVA 227 (242)
T ss_dssp TCCSCHHHHHH----HHTCCC-CSCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTCCCSEEEEEEC-CCSHHHHHCHHHH
T ss_pred HHHHHHHHHHH----HHHhcc-cCCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHhcCCeEEEEeC-CceeEcCCHHHHH
Confidence 01111111111 111111 12267899999999999999865 44556667777778888885 9999999999999
Q ss_pred HHHHHhhhhc
Q 024971 236 SACLHTLSYL 245 (260)
Q Consensus 236 ~~i~~~l~~~ 245 (260)
+.|.+|++..
T Consensus 228 ~~i~~fl~~~ 237 (242)
T 2k2q_B 228 ERIFAILNQH 237 (242)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHhhcc
Confidence 9999999753
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.3e-25 Score=162.73 Aligned_cols=121 Identities=20% Similarity=0.289 Sum_probs=97.9
Q ss_pred HHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHH
Q 024971 39 WASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK 118 (260)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (260)
+++++..+++.++ +++++||||||.+++.+|.++|++|+++|+++|...
T Consensus 186 ~~~~l~~l~~~~~--~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~----------------------------- 234 (328)
T 1qlw_A 186 TVANLSKLAIKLD--GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC----------------------------- 234 (328)
T ss_dssp HHHHHHHHHHHHT--SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-----------------------------
T ss_pred HHHHHHHHHHHhC--CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC-----------------------------
Confidence 7788888888876 899999999999999999999999999999997520
Q ss_pred HHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCC
Q 024971 119 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPW 198 (260)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 198 (260)
.......+.+++|+|+++|++|.+
T Consensus 235 --------------------------------------------------------~~~~~~~~~~~~PvLii~G~~D~~ 258 (328)
T 1qlw_A 235 --------------------------------------------------------PKPEDVKPLTSIPVLVVFGDHIEE 258 (328)
T ss_dssp --------------------------------------------------------CCGGGCGGGTTSCEEEEECSSCTT
T ss_pred --------------------------------------------------------CCHHHHhhccCCCEEEEeccCCcc
Confidence 000111223569999999999999
Q ss_pred CCh-----HHHHHhhccCC----CccEEEeCCCC-----CCcchhc-hhHHHHHHHHhhhhcc
Q 024971 199 EPI-----ELGRAYGNFDS----VEDFIVLPNVG-----HCPQVSL-YLSLSSACLHTLSYLH 246 (260)
Q Consensus 199 ~~~-----~~~~~~~~~~~----~~~~~~~~~~g-----H~~~~~~-p~~~~~~i~~~l~~~~ 246 (260)
+|. +..+.+.+.++ ++++++++++| |+++.+. ++++.+.|.+||+...
T Consensus 259 ~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~ 321 (328)
T 1qlw_A 259 FPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 321 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred ccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcc
Confidence 996 77766666544 78999999665 9999998 9999999999997653
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=166.77 Aligned_cols=208 Identities=11% Similarity=0.033 Sum_probs=125.8
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
+++||+|+++|+||+|.|.... ..... ++.+|+..+++.+.. ++++++|||+||.+++.+|.++| +|++
T Consensus 184 ~~~g~~vi~~D~~G~G~s~~~~-------~~~~~-~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~ 254 (405)
T 3fnb_A 184 WEHDYNVLMVDLPGQGKNPNQG-------LHFEV-DARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKA 254 (405)
T ss_dssp HHTTCEEEEECCTTSTTGGGGT-------CCCCS-CTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCE
T ss_pred HhCCcEEEEEcCCCCcCCCCCC-------CCCCc-cHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEE
Confidence 4689999999999999996433 11222 457777778887766 79999999999999999999999 8999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|+++|...... .......... ..+......+.................+........
T Consensus 255 ~v~~~p~~~~~~-------------~~~~~~~~~~---------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (405)
T 3fnb_A 255 WIASTPIYDVAE-------------VFRISFSTAL---------KAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVD 312 (405)
T ss_dssp EEEESCCSCHHH-------------HHHHHCC---------------------------CCCHHHHHHHHHHHHHHTSSS
T ss_pred EEEecCcCCHHH-------------HHHHhhhhhh---------hCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCC
Confidence 999998753210 0000000000 000000000000000000000111111111111111
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC----CccEEEe---CCCCCCcchhchhH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS----VEDFIVL---PNVGHCPQVSLYLS 233 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~---~~~gH~~~~~~p~~ 233 (260)
....+..+..... ...+.++++|+|+++|++|.+++++..+.+.+.++ +.+++++ +++||....++++.
T Consensus 313 ~~~~~~~~~~~~~----~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~ 388 (405)
T 3fnb_A 313 FITSVNEVLEQAQ----IVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRL 388 (405)
T ss_dssp HHHHHHHHHHHCC----CCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHH
T ss_pred HHHHHHHHHHhhc----ccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHH
Confidence 1122222222211 22367889999999999999998888877766543 5679999 66778888999999
Q ss_pred HHHHHHHhhhhc
Q 024971 234 LSSACLHTLSYL 245 (260)
Q Consensus 234 ~~~~i~~~l~~~ 245 (260)
+.+.|.+||+..
T Consensus 389 ~~~~i~~fL~~~ 400 (405)
T 3fnb_A 389 MHYQVFEWLNHI 400 (405)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999754
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-24 Score=145.57 Aligned_cols=141 Identities=12% Similarity=0.021 Sum_probs=114.4
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC--ccchhhceEec
Q 024971 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME--PEICRGMILLN 85 (260)
Q Consensus 8 ~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~ 85 (260)
+|+++|+||+|.|.. .+.+++++++.+++++++.++++++||||||.+++.++.++ |++|+++|+++
T Consensus 35 ~v~~~d~~g~g~s~~-----------~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~ 103 (181)
T 1isp_A 35 KLYAVDFWDKTGTNY-----------NNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLG 103 (181)
T ss_dssp GEEECCCSCTTCCHH-----------HHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEES
T ss_pred cEEEEecCCCCCchh-----------hhHHHHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEc
Confidence 799999999998743 47789999999999999999999999999999999999988 89999999999
Q ss_pred cCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHH
Q 024971 86 ISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVF 165 (260)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (260)
++...... . ..
T Consensus 104 ~~~~~~~~------------------------------------------~------~~--------------------- 114 (181)
T 1isp_A 104 GANRLTTG------------------------------------------K------AL--------------------- 114 (181)
T ss_dssp CCGGGTCS------------------------------------------B------CC---------------------
T ss_pred Cccccccc------------------------------------------c------cC---------------------
Confidence 87422100 0 00
Q ss_pred HHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhhhc
Q 024971 166 LEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~~ 245 (260)
.......++|+++++|++|.++|++.. ..+++++++++++||+.+.++| ++.+.|.+|++..
T Consensus 115 ------------~~~~~~~~~p~l~i~G~~D~~v~~~~~-----~~~~~~~~~~~~~gH~~~~~~~-~~~~~i~~fl~~~ 176 (181)
T 1isp_A 115 ------------PGTDPNQKILYTSIYSSADMIVMNYLS-----RLDGARNVQIHGVGHIGLLYSS-QVNSLIKEGLNGG 176 (181)
T ss_dssp ------------CCSCTTCCCEEEEEEETTCSSSCHHHH-----CCBTSEEEEESSCCTGGGGGCH-HHHHHHHHHHTTT
T ss_pred ------------CCCCCccCCcEEEEecCCCcccccccc-----cCCCCcceeeccCchHhhccCH-HHHHHHHHHHhcc
Confidence 000012357999999999999998843 3678899999999999999987 7999999999764
Q ss_pred c
Q 024971 246 H 246 (260)
Q Consensus 246 ~ 246 (260)
.
T Consensus 177 ~ 177 (181)
T 1isp_A 177 G 177 (181)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=149.23 Aligned_cols=154 Identities=11% Similarity=0.043 Sum_probs=114.1
Q ss_pred CCC--ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCccchh
Q 024971 3 LAK--SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 3 L~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
|++ ||+|+++|+||++. . +..+++..+++.++. ++++++||||||.+++.+|.++| |+
T Consensus 31 l~~~~g~~vi~~d~~g~~~--------------~---~~~~~~~~~~~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p--v~ 91 (194)
T 2qs9_A 31 LEKIPGFQCLAKNMPDPIT--------------A---RESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHR--VY 91 (194)
T ss_dssp HTTSTTCCEEECCCSSTTT--------------C---CHHHHHHHHHHTSCCCTTEEEEEETHHHHHHHHHHHHSC--CS
T ss_pred HhhccCceEEEeeCCCCCc--------------c---cHHHHHHHHHHHhCcCCCEEEEEcCcHHHHHHHHHHhCC--CC
Confidence 455 99999999998631 1 246677778888888 89999999999999999999999 99
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|++++..... . .... .....+...
T Consensus 92 ~lvl~~~~~~~~--------~-~~~~---------------------------~~~~~~~~~------------------ 117 (194)
T 2qs9_A 92 AIVLVSAYTSDL--------G-DENE---------------------------RASGYFTRP------------------ 117 (194)
T ss_dssp EEEEESCCSSCT--------T-CHHH---------------------------HHTSTTSSC------------------
T ss_pred EEEEEcCCcccc--------c-hhhh---------------------------HHHhhhccc------------------
Confidence 999999874210 0 0000 000000000
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
.. .+.+..+.+|+++++|++|.++|.+..+.+.+.. ++++++++++||+++.++|+.+++.+
T Consensus 118 ~~----------------~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~~- 179 (194)
T 2qs9_A 118 WQ----------------WEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-ETKLHKFTDCGHFQNTEFHELITVVK- 179 (194)
T ss_dssp CC----------------HHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-TCEEEEESSCTTSCSSCCHHHHHHHH-
T ss_pred cc----------------HHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-CCeEEEeCCCCCccchhCHHHHHHHH-
Confidence 00 0112234579999999999999999998888877 78999999999999999999998776
Q ss_pred Hhhhhccc
Q 024971 240 HTLSYLHT 247 (260)
Q Consensus 240 ~~l~~~~~ 247 (260)
+|++....
T Consensus 180 ~fl~~~~~ 187 (194)
T 2qs9_A 180 SLLKVPAL 187 (194)
T ss_dssp HHHTCCCC
T ss_pred HHHHhhhh
Confidence 89876543
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.4e-25 Score=162.98 Aligned_cols=208 Identities=12% Similarity=0.110 Sum_probs=113.5
Q ss_pred CCCccEEEEEc----CCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHh--hCcc
Q 024971 3 LAKSHRVYSID----LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAV--MEPE 76 (260)
Q Consensus 3 L~~~~~v~~~D----~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~--~~p~ 76 (260)
|++||+|+++| +||||.|+.+. ..+++.+.+..+.+.++.++++|+||||||.+|+.+|. .+|+
T Consensus 64 L~~g~~Vi~~Dl~~D~~G~G~S~~~~----------~~~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~ 133 (335)
T 2q0x_A 64 LQGDWAFVQVEVPSGKIGSGPQDHAH----------DAEDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKS 133 (335)
T ss_dssp HTTTCEEEEECCGGGBTTSCSCCHHH----------HHHHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGG
T ss_pred HHCCcEEEEEeccCCCCCCCCccccC----------cHHHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchh
Confidence 56799999995 59999985421 23333333444444578899999999999999999998 5799
Q ss_pred chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 77 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+|+++|+++|..... .... .. ........ ....+........... . ..+. ....... .+....
T Consensus 134 rV~~lVL~~~~~~~~----~~~~-~~--~~~~~~~~---~~~~~~~~~~~~~~~~--~-~~~~-~~~~~~~---~~~~~~ 196 (335)
T 2q0x_A 134 SITRVILHGVVCDPE----NPLF-TP--EGCAARKE---HVEKLMAEGRGEDSLA--M-LKHY-DIPITPA---RLAGGG 196 (335)
T ss_dssp GEEEEEEEEECCCTT----STTT-SH--HHHHHHHH---HHHHHHHHTCTTCGGG--G-TTTC-SSCCCHH---HHHTCS
T ss_pred ceeEEEEECCcccch----hccc-CH--HHHHHHHH---HHHHHhhccCcccccc--c-hhhc-cCccCHH---HHhhcc
Confidence 999999999864221 0000 00 00000000 0000000000000000 0 0000 0001111 111110
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH-----HHHhhccCCCcc--------E-----EE
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-----GRAYGNFDSVED--------F-----IV 218 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-----~~~~~~~~~~~~--------~-----~~ 218 (260)
. ......+..........+..+.+.+|++|+|+|+|++|.++|++. .+.+.+..++.+ + ++
T Consensus 197 ~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 275 (335)
T 2q0x_A 197 F-PTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHTGCNRVTVSYFNDTCDELRRV 275 (335)
T ss_dssp C-SSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHHHSSSSCEEEEECCCEECTTSCE
T ss_pred C-CCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHHhcCccccccccccchhhhhhcc
Confidence 0 010111100000000001134577899999999999999999763 456777788887 6 88
Q ss_pred eCCCCCCcchhchhHHHHHHHHhhhhcc
Q 024971 219 LPNVGHCPQVSLYLSLSSACLHTLSYLH 246 (260)
Q Consensus 219 ~~~~gH~~~~~~p~~~~~~i~~~l~~~~ 246 (260)
++++|| ++++.|.+||+...
T Consensus 276 i~~agH--------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 276 LKAAES--------EHVAAILQFLADED 295 (335)
T ss_dssp EECCHH--------HHHHHHHHHHHHHH
T ss_pred cCCCCC--------HHHHHHHHHHHhhh
Confidence 999999 34888888886553
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-25 Score=155.29 Aligned_cols=151 Identities=17% Similarity=0.159 Sum_probs=123.1
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCC------ceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD------QAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
+||.|+++|+||+|.|....... ....+++++++|+.++++.+..+ +++++|||+||.+++.++.++|+++
T Consensus 63 ~G~~v~~~d~~g~g~s~~~~~~~---~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v 139 (223)
T 2o2g_A 63 AGLATLLIDLLTQEEEEIDLRTR---HLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETV 139 (223)
T ss_dssp HTCEEEEECSSCHHHHHHHHHHC---SSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred CCCEEEEEcCCCcCCCCccchhh---cccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCce
Confidence 48999999999999886543100 12368899999999999888544 8999999999999999999999999
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++|++++....
T Consensus 140 ~~~v~~~~~~~~-------------------------------------------------------------------- 151 (223)
T 2o2g_A 140 QAVVSRGGRPDL-------------------------------------------------------------------- 151 (223)
T ss_dssp EEEEEESCCGGG--------------------------------------------------------------------
T ss_pred EEEEEeCCCCCc--------------------------------------------------------------------
Confidence 999999984210
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcch-hchhHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV-SLYLSLSSA 237 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~ 237 (260)
....+.++++|+++++|++|.+++.+..+.+.+..++.++++++++||.... +.++++.+.
T Consensus 152 ------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 213 (223)
T 2o2g_A 152 ------------------APSALPHVKAPTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQL 213 (223)
T ss_dssp ------------------CTTTGGGCCSCEEEEEETTCHHHHHHHHHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHH
T ss_pred ------------------CHHHHhcCCCCEEEEEccccCCCCHHHHHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHH
Confidence 0123456789999999999999987777777777788999999999998766 568999999
Q ss_pred HHHhhhh
Q 024971 238 CLHTLSY 244 (260)
Q Consensus 238 i~~~l~~ 244 (260)
+.+|++.
T Consensus 214 i~~fl~~ 220 (223)
T 2o2g_A 214 ASEWFMH 220 (223)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999964
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=144.16 Aligned_cols=140 Identities=14% Similarity=0.122 Sum_probs=113.8
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 9 VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 9 v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
++.+|+||++ .++++++++++.+++++++ ++++++||||||.+++.+|.++|++|+++|+++|..
T Consensus 45 ~~~v~~~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 109 (191)
T 3bdv_A 45 WQRIRQREWY--------------QADLDRWVLAIRRELSVCT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAE 109 (191)
T ss_dssp SEECCCSCCS--------------SCCHHHHHHHHHHHHHTCS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCC
T ss_pred eEEEeccCCC--------------CcCHHHHHHHHHHHHHhcC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCc
Confidence 4566777753 3478999999999999988 899999999999999999999999999999999874
Q ss_pred cccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHH
Q 024971 89 RMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF 168 (260)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (260)
..... +..
T Consensus 110 ~~~~~--------------------------------------------~~~---------------------------- 117 (191)
T 3bdv_A 110 PMRFE--------------------------------------------IDD---------------------------- 117 (191)
T ss_dssp GGGGT--------------------------------------------CTT----------------------------
T ss_pred ccccc--------------------------------------------Ccc----------------------------
Confidence 32100 000
Q ss_pred HhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcch----hchhHHHHHHHHhhhh
Q 024971 169 ICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV----SLYLSLSSACLHTLSY 244 (260)
Q Consensus 169 ~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~p~~~~~~i~~~l~~ 244 (260)
...+.++++|+++++|++|.++|.+..+.+.+.. ++++++++++||+++. +.|+.+ +.|.+|++.
T Consensus 118 ---------~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~fl~~ 186 (191)
T 3bdv_A 118 ---------RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-DSELVDVGEAGHINAEAGFGPWEYGL-KRLAEFSEI 186 (191)
T ss_dssp ---------TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-TCEEEECCSCTTSSGGGTCSSCHHHH-HHHHHHHHT
T ss_pred ---------ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCcccccccchhHHHHH-HHHHHHHHH
Confidence 0245678899999999999999999888887766 7899999999999988 456555 999999987
Q ss_pred cc
Q 024971 245 LH 246 (260)
Q Consensus 245 ~~ 246 (260)
+.
T Consensus 187 ~~ 188 (191)
T 3bdv_A 187 LI 188 (191)
T ss_dssp TC
T ss_pred hc
Confidence 63
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.4e-25 Score=160.84 Aligned_cols=177 Identities=16% Similarity=0.111 Sum_probs=125.0
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC------CceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.||.|+++|+||+|.|.... ..+++.++++|+.++++.+.. ++++++||||||.+++.++.++| +
T Consensus 54 ~g~~v~~~d~~G~g~s~~~~-------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~ 124 (290)
T 3ksr_A 54 LGCICMTFDLRGHEGYASMR-------QSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--V 124 (290)
T ss_dssp TTCEEECCCCTTSGGGGGGT-------TTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--C
T ss_pred CCCEEEEeecCCCCCCCCCc-------ccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--C
Confidence 48999999999999998765 467899999999999998842 47999999999999999999998 8
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++++++|...... .+.. +.. . ... ...+ ..+......
T Consensus 125 ~~~~l~~p~~~~~~----~~~~-~~~-~--------------~~~---~~~~-------------------~~~~~~~~~ 162 (290)
T 3ksr_A 125 EWLALRSPALYKDA----HWDQ-PKV-S--------------LNA---DPDL-------------------MDYRRRALA 162 (290)
T ss_dssp SEEEEESCCCCCSS----CTTS-BHH-H--------------HHH---STTH-------------------HHHTTSCCC
T ss_pred CEEEEeCcchhhhh----hhhc-ccc-c--------------ccC---Chhh-------------------hhhhhhhhh
Confidence 89999988653211 0000 000 0 000 0000 000000000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCc---cEEEeCCCCCCcch-hchhHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE---DFIVLPNVGHCPQV-SLYLSL 234 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~gH~~~~-~~p~~~ 234 (260)
...... ...+.++++|+++++|++|.+++.+..+.+.+.+++. ++++++++||.+.. +.++++
T Consensus 163 ~~~~~~-------------~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 229 (290)
T 3ksr_A 163 PGDNLA-------------LAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEY 229 (290)
T ss_dssp GGGCHH-------------HHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHH
T ss_pred hccccH-------------HHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHH
Confidence 000000 1223467799999999999999999888888776654 49999999997654 589999
Q ss_pred HHHHHHhhhhc
Q 024971 235 SSACLHTLSYL 245 (260)
Q Consensus 235 ~~~i~~~l~~~ 245 (260)
.+.+.+|++..
T Consensus 230 ~~~i~~fl~~~ 240 (290)
T 3ksr_A 230 TRALIDWLTEM 240 (290)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999654
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=156.59 Aligned_cols=207 Identities=13% Similarity=0.047 Sum_probs=123.0
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
|+++|+|+++|+||+|.+.. ....+++.+.+..+.+.++.++++++||||||.+++.+|.+ ++++++|
T Consensus 56 l~~~~~v~~~d~~~~~~~~~----------~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v 123 (275)
T 3h04_A 56 LTEHYDLIQLSYRLLPEVSL----------DCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVI 123 (275)
T ss_dssp HTTTEEEEEECCCCTTTSCH----------HHHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEE
T ss_pred HHhCceEEeeccccCCcccc----------chhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEE
Confidence 45669999999999987643 23566666777777777777899999999999999999998 7899999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcc-cHHHHHHHhccCCccch
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV-TEELVEKILQPGLETGA 161 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 161 (260)
+++|...... .......... .. ........................ ...........
T Consensus 124 ~~~~~~~~~~---------~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 181 (275)
T 3h04_A 124 DFYGYSRINT---------EPFKTTNSYY------AK-IAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARG------ 181 (275)
T ss_dssp EESCCSCSCS---------HHHHSCCHHH------HH-HHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHH------
T ss_pred eccccccccc---------cccccccchh------hc-ccccchHHHHhcccCCCCcCCCccccchhhhhhhhh------
Confidence 9998753310 0000000000 00 000000000000000000000000 00000000000
Q ss_pred HHHHHHHHhh-----hCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhch---hH
Q 024971 162 ADVFLEFICY-----SGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLY---LS 233 (260)
Q Consensus 162 ~~~~~~~~~~-----~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p---~~ 233 (260)
...+...... .........+.+++ |+|+++|++|.++|.+..+.+.+..++.++++++++||.++.+.+ ++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 260 (275)
T 3h04_A 182 TGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAIT 260 (275)
T ss_dssp HTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCTHHHHHHHTTCSSEEEEEECSSCSCTTSSCCHHHHH
T ss_pred cCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCChHHHHHHHHhcCCceEEEeCCCCCCcccCCchhHHH
Confidence 0000000000 00000112235667 999999999999999999999999999999999999999999988 58
Q ss_pred HHHHHHHhhhh
Q 024971 234 LSSACLHTLSY 244 (260)
Q Consensus 234 ~~~~i~~~l~~ 244 (260)
+.+.+.+|++.
T Consensus 261 ~~~~i~~fl~~ 271 (275)
T 3h04_A 261 IYRKVVDFLNA 271 (275)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888888864
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-23 Score=146.83 Aligned_cols=153 Identities=15% Similarity=0.107 Sum_probs=113.6
Q ss_pred CCC-CccEEEEE-------------------cCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cC--CceE
Q 024971 2 VLA-KSHRVYSI-------------------DLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VK--DQAF 56 (260)
Q Consensus 2 ~L~-~~~~v~~~-------------------D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~ 56 (260)
.|+ .||+|+++ |++|+ .+.... ...++++.++++.++++.+ +. ++++
T Consensus 45 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~ 116 (232)
T 1fj2_A 45 GIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQE-------DESGIKQAAENIKALIDQEVKNGIPSNRII 116 (232)
T ss_dssp TTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCB-------CHHHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHhcCCcEEEecCCCccccccccccccccccccccC-Cccccc-------ccHHHHHHHHHHHHHHHHHhcCCCCcCCEE
Confidence 355 49999998 66666 222221 4568899999999999987 55 7899
Q ss_pred EEEeChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHh
Q 024971 57 FICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ 136 (260)
Q Consensus 57 lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (260)
++|||+||.+++.++.++|++++++|++++.......
T Consensus 117 l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~------------------------------------------- 153 (232)
T 1fj2_A 117 LGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS------------------------------------------- 153 (232)
T ss_dssp EEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG-------------------------------------------
T ss_pred EEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc-------------------------------------------
Confidence 9999999999999999999999999999986422100
Q ss_pred ccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC-----
Q 024971 137 CYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----- 211 (260)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----- 211 (260)
.. .....+..+++|+++++|++|.+++.+..+.+.+.+
T Consensus 154 -~~------------------------------------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~ 196 (232)
T 1fj2_A 154 -FP------------------------------------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVN 196 (232)
T ss_dssp -SC------------------------------------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSC
T ss_pred -cc------------------------------------ccccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCC
Confidence 00 002245677899999999999999988777655543
Q ss_pred -CCccEEEeCCCCCCcchhchhHHHHHHHHhh
Q 024971 212 -SVEDFIVLPNVGHCPQVSLYLSLSSACLHTL 242 (260)
Q Consensus 212 -~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l 242 (260)
++.++++++++||....+.++++.+.+.+++
T Consensus 197 ~~~~~~~~~~~~~H~~~~~~~~~i~~~l~~~l 228 (232)
T 1fj2_A 197 PANVTFKTYEGMMHSSCQQEMMDVKQFIDKLL 228 (232)
T ss_dssp GGGEEEEEETTCCSSCCHHHHHHHHHHHHHHS
T ss_pred CCceEEEEeCCCCcccCHHHHHHHHHHHHHhc
Confidence 5689999999999987665544444444433
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.8e-24 Score=153.43 Aligned_cols=146 Identities=15% Similarity=0.139 Sum_probs=113.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH---HHHhhcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLND---FCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
++||.|+++|+||+|.+.... ..++...++.+.+ ++..++.++++++||||||.+++.++.++|+ +++
T Consensus 79 ~~G~~v~~~d~~g~g~~~~~~--------~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~ 149 (262)
T 1jfr_A 79 SQGFVVFTIDTNTTLDQPDSR--------GRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKA 149 (262)
T ss_dssp TTTCEEEEECCSSTTCCHHHH--------HHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSE
T ss_pred hCCCEEEEeCCCCCCCCCchh--------HHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceE
Confidence 468999999999999764311 1122333333332 2334566789999999999999999999997 999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|+++|...
T Consensus 150 ~v~~~p~~~----------------------------------------------------------------------- 158 (262)
T 1jfr_A 150 AIPLTGWNT----------------------------------------------------------------------- 158 (262)
T ss_dssp EEEESCCCS-----------------------------------------------------------------------
T ss_pred EEeecccCc-----------------------------------------------------------------------
Confidence 999987410
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH-HHHhhccCCC---ccEEEeCCCCCCcchhchhHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSV---EDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~---~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
...+.++++|+++++|++|.+++.+. .+.+.+.+++ .++++++++||..+.++++++.+
T Consensus 159 -----------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 221 (262)
T 1jfr_A 159 -----------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAK 221 (262)
T ss_dssp -----------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHH
T ss_pred -----------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHH
Confidence 23456778999999999999999887 8877776554 48899999999999999999999
Q ss_pred HHHHhhhhcc
Q 024971 237 ACLHTLSYLH 246 (260)
Q Consensus 237 ~i~~~l~~~~ 246 (260)
.+.+|++..-
T Consensus 222 ~i~~fl~~~l 231 (262)
T 1jfr_A 222 YSISWLKRFI 231 (262)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999997553
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=154.31 Aligned_cols=187 Identities=12% Similarity=0.113 Sum_probs=122.6
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHH-HHHHhhcCCceEEEEeChhhHHHHHHHhhCc---cc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN-DFCKDVVKDQAFFICNSIGGLVGLQAAVMEP---EI 77 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~ 77 (260)
.|..+|+|+++|+||||.|+.. .++++++++++. .+++.++.++++|+||||||.+++.+|.++| ++
T Consensus 91 ~l~~~~~v~~~d~~G~G~s~~~---------~~~~~~~a~~~~~~l~~~~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~ 161 (300)
T 1kez_A 91 ALRGIAPVRAVPQPGYEEGEPL---------PSSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHP 161 (300)
T ss_dssp HTSSSCCBCCCCCTTSSTTCCB---------CSSHHHHHHHHHHHHHHHCSSCCEEEECCTHHHHHHHHHHHHTTTTTCC
T ss_pred hcCCCceEEEecCCCCCCCCCC---------CCCHHHHHHHHHHHHHHhcCCCCEEEEEECHhHHHHHHHHHHHHhcCCC
Confidence 3667899999999999998653 368999999988 4667778889999999999999999999988 48
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCC-cccHHHHHHHhccC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTS-QVTEELVEKILQPG 156 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 156 (260)
|+++|++++..... ... +..+. .......+.... .......
T Consensus 162 v~~lvl~~~~~~~~---------~~~---~~~~~-------------------~~~~~~~~~~~~~~~~~~~~------- 203 (300)
T 1kez_A 162 PRGVVLIDVYPPGH---------QDA---MNAWL-------------------EELTATLFDRETVRMDDTRL------- 203 (300)
T ss_dssp CSEEECBTCCCTTT---------CHH---HHHHH-------------------HHHHGGGCCCCSSCCCHHHH-------
T ss_pred ccEEEEECCCCCcc---------hhH---HHHHH-------------------HHHHHHHHhCcCCccchHHH-------
Confidence 99999999864221 000 00000 001111111110 0111110
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEEeCCCCCCcch-hchhHH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGHCPQV-SLYLSL 234 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-~~p~~~ 234 (260)
..+..+..... .....++++|+++++|+ |..+++.. ..+.+..+ +.+++++++ ||+.++ ++|+++
T Consensus 204 ------~~~~~~~~~~~----~~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~ 270 (300)
T 1kez_A 204 ------TALGAYDRLTG----QWRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAI 270 (300)
T ss_dssp ------HHHHHHHHHTT----TCCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCSSCCEEEEESS-CTTTSSSSCSHHH
T ss_pred ------HHHHHHHHHHh----cCCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcCCCCeEEEecC-CChhhccccHHHH
Confidence 01111111111 11347789999999996 44555443 34555555 478999998 999986 899999
Q ss_pred HHHHHHhhhhcccc
Q 024971 235 SSACLHTLSYLHTC 248 (260)
Q Consensus 235 ~~~i~~~l~~~~~~ 248 (260)
++.|.+|++.....
T Consensus 271 ~~~i~~fl~~~~~~ 284 (300)
T 1kez_A 271 ARHIDAWLGGGNSS 284 (300)
T ss_dssp HHHHHHHHTCC---
T ss_pred HHHHHHHHHhccCC
Confidence 99999999876543
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-22 Score=142.15 Aligned_cols=144 Identities=15% Similarity=0.069 Sum_probs=114.0
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
.+||.|+++|+||+|.|..... .....++|+.++++.+ +.++++++|||+||.+++.++.++ +++
T Consensus 67 ~~g~~v~~~d~~g~g~s~~~~~---------~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~ 135 (220)
T 2fuk_A 67 ELGITVVRFNFRSVGTSAGSFD---------HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQ 135 (220)
T ss_dssp TTTCEEEEECCTTSTTCCSCCC---------TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCS
T ss_pred HCCCeEEEEecCCCCCCCCCcc---------cCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--ccc
Confidence 3589999999999999986541 1234566666665555 345899999999999999999887 799
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|++++......
T Consensus 136 ~~v~~~~~~~~~~------------------------------------------------------------------- 148 (220)
T 2fuk_A 136 VLISIAPPAGRWD------------------------------------------------------------------- 148 (220)
T ss_dssp EEEEESCCBTTBC-------------------------------------------------------------------
T ss_pred EEEEecccccchh-------------------------------------------------------------------
Confidence 9999998753210
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC-CCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-SVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
...+. ..+|+++++|++|.+++.+..+.+.+.. ++.++++++++||.... +++++.+.+
T Consensus 149 ------------------~~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~i 208 (220)
T 2fuk_A 149 ------------------FSDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHR-KLIDLRGAL 208 (220)
T ss_dssp ------------------CTTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTT-CHHHHHHHH
T ss_pred ------------------hhhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCceehh-hHHHHHHHH
Confidence 00111 1579999999999999999999988887 88999999999999887 488999999
Q ss_pred HHhhhhc
Q 024971 239 LHTLSYL 245 (260)
Q Consensus 239 ~~~l~~~ 245 (260)
.+|++..
T Consensus 209 ~~~l~~~ 215 (220)
T 2fuk_A 209 QHGVRRW 215 (220)
T ss_dssp HHHHGGG
T ss_pred HHHHHHH
Confidence 9999654
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=151.70 Aligned_cols=195 Identities=21% Similarity=0.160 Sum_probs=124.1
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCC-------------CCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFF-------------DKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIG 63 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~G 63 (260)
+++||.|+++|+||+|.|..+...... ....+.+....+|+..+++.+ +.++++++|||+|
T Consensus 131 ~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~G 210 (346)
T 3fcy_A 131 VAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQG 210 (346)
T ss_dssp HTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHH
T ss_pred HhCCcEEEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHH
Confidence 468999999999999998765421100 013345566777777666655 3358999999999
Q ss_pred hHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCc
Q 024971 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ 143 (260)
Q Consensus 64 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (260)
|.+++.+|.++|+ |+++|+++|..... ............. ..+...+.... ....
T Consensus 211 G~la~~~a~~~p~-v~~~vl~~p~~~~~------------~~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~ 265 (346)
T 3fcy_A 211 GGLSLACAALEPR-VRKVVSEYPFLSDY------------KRVWDLDLAKNAY-----------QEITDYFRLFD-PRHE 265 (346)
T ss_dssp HHHHHHHHHHSTT-CCEEEEESCSSCCH------------HHHHHTTCCCGGG-----------HHHHHHHHHHC-TTCT
T ss_pred HHHHHHHHHhCcc-ccEEEECCCcccCH------------HHHhhccccccch-----------HHHHHHHHhcC-CCcc
Confidence 9999999999998 99999998863210 0000000000000 00011111000 0000
Q ss_pred ccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEEeCCC
Q 024971 144 VTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNV 222 (260)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~ 222 (260)
........+ .. .+....+.++++|+++++|++|.+++++....+.+..+ ++++++++++
T Consensus 266 ~~~~~~~~~-----------------~~---~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (346)
T 3fcy_A 266 RENEVFTKL-----------------GY---IDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDY 325 (346)
T ss_dssp THHHHHHHH-----------------GG---GCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTC
T ss_pred hHHHHHHHh-----------------Cc---ccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCC
Confidence 011111111 00 11134457788999999999999999999988888766 6899999999
Q ss_pred CCCcchhchhHHHHHHHHhhhhcc
Q 024971 223 GHCPQVSLYLSLSSACLHTLSYLH 246 (260)
Q Consensus 223 gH~~~~~~p~~~~~~i~~~l~~~~ 246 (260)
||..+ +++.+.+.+||+.+.
T Consensus 326 gH~~~----~~~~~~i~~fl~~l~ 345 (346)
T 3fcy_A 326 GHEPM----RGFGDLAMQFMLELY 345 (346)
T ss_dssp CSSCC----TTHHHHHHHHHHTTC
T ss_pred CCcCH----HHHHHHHHHHHHHhh
Confidence 99987 677888888987653
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=150.11 Aligned_cols=193 Identities=13% Similarity=0.038 Sum_probs=123.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-cCCceEEEEeChhhHHHHHHHhhC---ccc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVME---PEI 77 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~---p~~ 77 (260)
.|+.+|+|+++|+||||.|+... .+++++++++.+.++.+ +.++++|+||||||.+|+.+|.++ |++
T Consensus 105 ~L~~~~~v~~~d~~G~G~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~ 175 (319)
T 3lcr_A 105 ELDAGRRVSALVPPGFHGGQALP---------ATLTVLVRSLADVVQAEVADGEFALAGHSSGGVVAYEVARELEARGLA 175 (319)
T ss_dssp HHCTTSEEEEEECTTSSTTCCEE---------SSHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHTTCC
T ss_pred HhCCCceEEEeeCCCCCCCCCCC---------CCHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHhcCCC
Confidence 36789999999999999876533 48999999999988887 558999999999999999999988 778
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
|+++|++++...... ......+...+.. .. .... .... ..... ...
T Consensus 176 v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~-----~~---------~~~~-~~~~-~~~~~-~~~--------- 221 (319)
T 3lcr_A 176 PRGVVLIDSYSFDGD--------GGRPEELFRSALN-----ER---------FVEY-LRLT-GGGNL-SQR--------- 221 (319)
T ss_dssp CSCEEEESCCCCCSS--------CCHHHHHHHHHHH-----HH---------HHHH-HHHH-CCCCH-HHH---------
T ss_pred ccEEEEECCCCCCcc--------chhhHHHHHHHHH-----HH---------Hhhh-hccc-CCCch-hHH---------
Confidence 999999998643210 0011111110000 00 0000 0000 00000 111
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEEeCCCCCCcchh--chhHH
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGHCPQVS--LYLSL 234 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~--~p~~~ 234 (260)
...+......... .....+++|+++|+|++| .+++.....+.+..+ ..+++++++ +|+.+++ +|+++
T Consensus 222 ----l~~~~~~~~~~~~----~~~~~i~~PvLli~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~g-~H~~~~~~~~~~~v 291 (319)
T 3lcr_A 222 ----ITAQVWCLELLRG----WRPEGLTAPTLYVRPAQP-LVEQEKPEWRGDVLAAMGQVVEAPG-DHFTIIEGEHVAST 291 (319)
T ss_dssp ----HHHHHHHHHHTTT----CCCCCCSSCEEEEEESSC-SSSCCCTHHHHHHHHTCSEEEEESS-CTTGGGSTTTHHHH
T ss_pred ----HHHHHHHHHHHhc----CCCCCcCCCEEEEEeCCC-CCCcccchhhhhcCCCCceEEEeCC-CcHHhhCcccHHHH
Confidence 1111111111111 123678999999999985 455555555555544 467777885 8888776 99999
Q ss_pred HHHHHHhhhhccc
Q 024971 235 SSACLHTLSYLHT 247 (260)
Q Consensus 235 ~~~i~~~l~~~~~ 247 (260)
++.|.+||+....
T Consensus 292 a~~i~~fL~~~~~ 304 (319)
T 3lcr_A 292 AHIVGDWLREAHA 304 (319)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccc
Confidence 9999999987654
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=154.62 Aligned_cols=182 Identities=16% Similarity=0.135 Sum_probs=126.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh---hcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
++||.|+++|+||+|.|.... ....++++.+.++.+++.. ++.++++++|||+||.+++.++.+ |+++++
T Consensus 177 ~~G~~v~~~d~rG~G~s~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a 249 (386)
T 2jbw_A 177 DRGMATATFDGPGQGEMFEYK------RIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAA 249 (386)
T ss_dssp HTTCEEEEECCTTSGGGTTTC------CSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCE
T ss_pred hCCCEEEEECCCCCCCCCCCC------CCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeE
Confidence 579999999999999993322 2457888889999998888 566799999999999999999998 889999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|++ +....... ... . ...+.......+... ...+..
T Consensus 250 ~v~~-~~~~~~~~----------~~~----~---------------~~~~~~~~~~~~g~~--~~~~~~----------- 286 (386)
T 2jbw_A 250 CISW-GGFSDLDY----------WDL----E---------------TPLTKESWKYVSKVD--TLEEAR----------- 286 (386)
T ss_dssp EEEE-SCCSCSTT----------GGG----S---------------CHHHHHHHHHHTTCS--SHHHHH-----------
T ss_pred EEEe-ccCChHHH----------HHh----c---------------cHHHHHHHHHHhCCC--CHHHHH-----------
Confidence 9999 76432110 000 0 000000000101100 001110
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC-C-CccEEEeCCCCCCcchhchhHHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-S-VEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
...... ......+.++++|+|+++|++|. ++++..+.+.+.+ + +.++++++++||.. .++++++.+.|
T Consensus 287 -----~~~~~~---~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i 356 (386)
T 2jbw_A 287 -----LHVHAA---LETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEM 356 (386)
T ss_dssp -----HHHHHH---TCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHH
T ss_pred -----HHHHHh---CChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHHH
Confidence 011111 11234567889999999999999 8999988888877 6 78999999999965 67899999999
Q ss_pred HHhhhhc
Q 024971 239 LHTLSYL 245 (260)
Q Consensus 239 ~~~l~~~ 245 (260)
.+|++..
T Consensus 357 ~~fl~~~ 363 (386)
T 2jbw_A 357 ADWLYDV 363 (386)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999654
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-24 Score=147.31 Aligned_cols=153 Identities=12% Similarity=0.107 Sum_probs=115.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCcc--chhhc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE--ICRGM 81 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~l 81 (260)
++||+|+++|+| .|+ ..+++++++++.++++.+ .++++++||||||.+++.++.++|+ +++++
T Consensus 31 ~~g~~v~~~d~~---~~~-----------~~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~ 95 (192)
T 1uxo_A 31 ADGVQADILNMP---NPL-----------QPRLEDWLDTLSLYQHTL-HENTYLVAHSLGCPAILRFLEHLQLRAALGGI 95 (192)
T ss_dssp HTTCEEEEECCS---CTT-----------SCCHHHHHHHHHTTGGGC-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEE
T ss_pred hCCcEEEEecCC---CCC-----------CCCHHHHHHHHHHHHHhc-cCCEEEEEeCccHHHHHHHHHHhcccCCccEE
Confidence 579999999999 221 127899999999999998 7899999999999999999999999 99999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|+++|...... . ...+ .......
T Consensus 96 v~~~~~~~~~~---------~-~~~~---------------------------~~~~~~~-------------------- 118 (192)
T 1uxo_A 96 ILVSGFAKSLP---------T-LQML---------------------------DEFTQGS-------------------- 118 (192)
T ss_dssp EEETCCSSCCT---------T-CGGG---------------------------GGGTCSC--------------------
T ss_pred EEeccCCCccc---------c-chhh---------------------------hhhhhcC--------------------
Confidence 99998643210 0 0000 0000000
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHH---HHHH
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSL---SSAC 238 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~---~~~i 238 (260)
.+ ...+.++++|+++++|++|.++|.+..+.+.+.. ++++++++++||+.+.++++++ .+.+
T Consensus 119 -------------~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l 183 (192)
T 1uxo_A 119 -------------FD-HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVL 183 (192)
T ss_dssp -------------CC-HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHH
T ss_pred -------------CC-HHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-CceEEEeCCCcCcccccccccHHHHHHHH
Confidence 00 1233456789999999999999999999888888 8999999999999999987655 5555
Q ss_pred HHhhh
Q 024971 239 LHTLS 243 (260)
Q Consensus 239 ~~~l~ 243 (260)
.+|++
T Consensus 184 ~~~l~ 188 (192)
T 1uxo_A 184 TSYFS 188 (192)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55553
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=149.73 Aligned_cols=156 Identities=16% Similarity=0.074 Sum_probs=112.0
Q ss_pred CCCCccEEEEE--cCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCc
Q 024971 2 VLAKSHRVYSI--DLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 2 ~L~~~~~v~~~--D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
.|+++|.|+++ |++|+|.|..............++.+.++++.++++.+ +.++++++||||||.+++.+|.++|
T Consensus 84 ~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 163 (251)
T 2r8b_A 84 RLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQP 163 (251)
T ss_dssp HHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHST
T ss_pred hcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCC
Confidence 36678999999 89999988643211000001123333455655555554 7789999999999999999999999
Q ss_pred cchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhcc
Q 024971 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (260)
Q Consensus 76 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
++++++|++++......
T Consensus 164 ~~v~~~v~~~~~~~~~~--------------------------------------------------------------- 180 (251)
T 2r8b_A 164 ELFDAAVLMHPLIPFEP--------------------------------------------------------------- 180 (251)
T ss_dssp TTCSEEEEESCCCCSCC---------------------------------------------------------------
T ss_pred cccCeEEEEecCCCccc---------------------------------------------------------------
Confidence 99999999998642210
Q ss_pred CCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC--CccEE-EeCCCCCCcchhchh
Q 024971 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFI-VLPNVGHCPQVSLYL 232 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~-~~~~~gH~~~~~~p~ 232 (260)
......+++|+++++|++|.+++.+..+.+.+.++ +.++. +++++||.++.+.++
T Consensus 181 ----------------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~~~ 238 (251)
T 2r8b_A 181 ----------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIRSGEID 238 (251)
T ss_dssp ----------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCCHHHHH
T ss_pred ----------------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHHH
Confidence 01123467999999999999999998888877766 45655 778899999888776
Q ss_pred HHHHHHHHhh
Q 024971 233 SLSSACLHTL 242 (260)
Q Consensus 233 ~~~~~i~~~l 242 (260)
++.+.+.+++
T Consensus 239 ~~~~~l~~~l 248 (251)
T 2r8b_A 239 AVRGFLAAYG 248 (251)
T ss_dssp HHHHHHGGGC
T ss_pred HHHHHHHHhc
Confidence 6665555443
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=142.59 Aligned_cols=154 Identities=14% Similarity=0.021 Sum_probs=117.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCC--------CCCCccHHHHHHHHHHHHHhhc-----CCceEEEEeChhhHHHHHHH
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFF--------DKPFYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAA 71 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~lvGhS~Gg~~a~~~a 71 (260)
+||.|+++|+||+|.|......... .....+.+..++|+.++++.+. .++++++|||+||.+++.++
T Consensus 54 ~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a 133 (236)
T 1zi8_A 54 QGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVA 133 (236)
T ss_dssp TTCEEEEECGGGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHH
T ss_pred CCcEEEeccccccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHh
Confidence 4999999999999988653210000 0023467788899999998885 46899999999999999999
Q ss_pred hhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHH
Q 024971 72 VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEK 151 (260)
Q Consensus 72 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
.++| +++++++.+....
T Consensus 134 ~~~~--~~~~v~~~~~~~~------------------------------------------------------------- 150 (236)
T 1zi8_A 134 SKGY--VDRAVGYYGVGLE------------------------------------------------------------- 150 (236)
T ss_dssp HHTC--SSEEEEESCSSGG-------------------------------------------------------------
T ss_pred ccCC--ccEEEEecCcccc-------------------------------------------------------------
Confidence 9998 8888887763200
Q ss_pred HhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC---CCccEEEeCCCCCCcch
Q 024971 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD---SVEDFIVLPNVGHCPQV 228 (260)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~ 228 (260)
.....+.++++|+++++|++|.+++.+..+.+.+.+ ++.++++++++||....
T Consensus 151 ------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 206 (236)
T 1zi8_A 151 ------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFAR 206 (236)
T ss_dssp ------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTC
T ss_pred ------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCccccc
Confidence 002345677899999999999999998888776654 57899999999997776
Q ss_pred hch--------hHHHHHHHHhhhhc
Q 024971 229 SLY--------LSLSSACLHTLSYL 245 (260)
Q Consensus 229 ~~p--------~~~~~~i~~~l~~~ 245 (260)
+.+ +++.+.+.+|++..
T Consensus 207 ~~~~~~~~~~~~~~~~~i~~fl~~~ 231 (236)
T 1zi8_A 207 TGSSGYVASAAALANERTLDFLVPL 231 (236)
T ss_dssp TTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHh
Confidence 543 56888888888654
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-21 Score=147.46 Aligned_cols=188 Identities=13% Similarity=0.124 Sum_probs=124.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc---CCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV---KDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
+.||.|+++|+||+|.|.... ...+.+.++.++.+.+.... .++++++|||+||.+++.+|..+|++|++
T Consensus 219 ~~G~~V~~~D~~G~G~s~~~~-------~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~ 291 (415)
T 3mve_A 219 KHDIAMLTVDMPSVGYSSKYP-------LTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKA 291 (415)
T ss_dssp GGTCEEEEECCTTSGGGTTSC-------CCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCE
T ss_pred hCCCEEEEECCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeE
Confidence 579999999999999998654 23456777778888877764 46899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|+++|...... .. ..... ..+......+.................
T Consensus 292 ~v~~~~~~~~~~------------~~-~~~~~------------~~~~~~~~~~~~~~g~~~~~~~~~~~~--------- 337 (415)
T 3mve_A 292 CVILGAPIHDIF------------AS-PQKLQ------------QMPKMYLDVLASRLGKSVVDIYSLSGQ--------- 337 (415)
T ss_dssp EEEESCCCSHHH------------HC-HHHHT------------TSCHHHHHHHHHHTTCSSBCHHHHHHH---------
T ss_pred EEEECCcccccc------------cc-HHHHH------------HhHHHHHHHHHHHhCCCccCHHHHHHH---------
Confidence 999998742110 00 00000 001111111111111111111111111
Q ss_pred hHHHHHHHHhhhCCCCCCcc--CCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEEL--LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~--~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
........ ... ..++++|+|+++|++|.++|.+..+.+.+..++++++++++.. ..+.++++.+.+
T Consensus 338 --------~~~~~~~~-~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~l~~i~g~~---~h~~~~~~~~~i 405 (415)
T 3mve_A 338 --------MAAWSLKV-QGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKISSKT---ITQGYEQSLDLA 405 (415)
T ss_dssp --------GGGGCTTT-TTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHHTBTTCEEEEECCCS---HHHHHHHHHHHH
T ss_pred --------HhhcCccc-ccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCceEEEecCCC---cccchHHHHHHH
Confidence 11100000 111 3688999999999999999999999988888999999999722 334778888888
Q ss_pred HHhhhh
Q 024971 239 LHTLSY 244 (260)
Q Consensus 239 ~~~l~~ 244 (260)
.+||+.
T Consensus 406 ~~fL~~ 411 (415)
T 3mve_A 406 IKWLED 411 (415)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 899864
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=147.44 Aligned_cols=176 Identities=9% Similarity=-0.001 Sum_probs=117.8
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC---------
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME--------- 74 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~--------- 74 (260)
+.||+|+++|+|+.+.+.. ...++++.+.+..+++.++.++++++||||||.+++.++.++
T Consensus 75 ~~g~~vi~~d~r~~~~~~~----------~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~ 144 (273)
T 1vkh_A 75 ESTVCQYSIEYRLSPEITN----------PRNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSE 144 (273)
T ss_dssp TCCEEEEEECCCCTTTSCT----------THHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCH
T ss_pred cCCcEEEEeecccCCCCCC----------CcHHHHHHHHHHHHHHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccc
Confidence 6799999999998765432 346778888888888888889999999999999999999986
Q ss_pred --------ccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCC-Cccc
Q 024971 75 --------PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDT-SQVT 145 (260)
Q Consensus 75 --------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 145 (260)
|++++++|++++...... ..... .. ...+....+... ....
T Consensus 145 ~~~~~~~~~~~v~~~v~~~~~~~~~~-------------~~~~~---~~--------------~~~~~~~~~~~~~~~~~ 194 (273)
T 1vkh_A 145 AQLQMLGLLQIVKRVFLLDGIYSLKE-------------LLIEY---PE--------------YDCFTRLAFPDGIQMYE 194 (273)
T ss_dssp HHHHHHHHHTTEEEEEEESCCCCHHH-------------HHHHC---GG--------------GHHHHHHHCTTCGGGCC
T ss_pred cccccccCCcccceeeeecccccHHH-------------hhhhc---cc--------------HHHHHHHHhcccccchh
Confidence 788999999987642210 00000 00 000011111000 0000
Q ss_pred HHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC----CCccEEEeCC
Q 024971 146 EELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----SVEDFIVLPN 221 (260)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~ 221 (260)
.......... ...+..+++|+++++|++|.++|.+..+.+.+.+ .+++++++++
T Consensus 195 --------------~~~~~~~~~~--------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~ 252 (273)
T 1vkh_A 195 --------------EEPSRVMPYV--------KKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDL 252 (273)
T ss_dssp --------------CCHHHHHHHH--------HHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred --------------hcccccChhh--------hhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCC
Confidence 0000000000 0012236799999999999999988877766553 3578999999
Q ss_pred CCCCcchhchhHHHHHHHHhh
Q 024971 222 VGHCPQVSLYLSLSSACLHTL 242 (260)
Q Consensus 222 ~gH~~~~~~p~~~~~~i~~~l 242 (260)
+||..+.++ +++.+.|.+|+
T Consensus 253 ~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 253 GLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp CSGGGGGGC-HHHHHHHHHTC
T ss_pred CcccccccC-hHHHHHHHHHc
Confidence 999998888 88999998886
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-22 Score=147.89 Aligned_cols=145 Identities=13% Similarity=0.101 Sum_probs=111.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH-----HHHhhcCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLND-----FCKDVVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
++||.|+++|+||+|.|.... ..++....+.+.+ +...++.++++++|||+||.+++.++.++|+ +
T Consensus 121 ~~G~~vv~~d~~g~g~s~~~~--------~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v 191 (306)
T 3vis_A 121 SHGFVVIAIDTNTTLDQPDSR--------ARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-L 191 (306)
T ss_dssp TTTEEEEEECCSSTTCCHHHH--------HHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-C
T ss_pred hCCCEEEEecCCCCCCCcchH--------HHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-e
Confidence 458999999999999885422 1122222222222 1222355689999999999999999999997 9
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++|+++|...
T Consensus 192 ~~~v~~~~~~~--------------------------------------------------------------------- 202 (306)
T 3vis_A 192 KAAIPLTPWHL--------------------------------------------------------------------- 202 (306)
T ss_dssp SEEEEESCCCS---------------------------------------------------------------------
T ss_pred eEEEEeccccC---------------------------------------------------------------------
Confidence 99999987521
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH-HHHHhhccCCC---ccEEEeCCCCCCcchhchhHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSV---EDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~---~~~~~~~~~gH~~~~~~p~~~ 234 (260)
...+.++++|+++++|++|.+++.+ ..+.+.+.+++ .++++++++||+.+.+.++++
T Consensus 203 -------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~ 263 (306)
T 3vis_A 203 -------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTI 263 (306)
T ss_dssp -------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHH
T ss_pred -------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhHH
Confidence 1245677899999999999999988 47777776554 568999999999999999999
Q ss_pred HHHHHHhhhhc
Q 024971 235 SSACLHTLSYL 245 (260)
Q Consensus 235 ~~~i~~~l~~~ 245 (260)
.+.+.+|++..
T Consensus 264 ~~~i~~fl~~~ 274 (306)
T 3vis_A 264 GMYSVAWLKRF 274 (306)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999654
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-22 Score=139.99 Aligned_cols=147 Identities=17% Similarity=0.077 Sum_probs=112.6
Q ss_pred CccEEEEEcCC-------------------CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cC--CceEEEEe
Q 024971 5 KSHRVYSIDLI-------------------GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VK--DQAFFICN 60 (260)
Q Consensus 5 ~~~~v~~~D~~-------------------G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~lvGh 60 (260)
+||+|+++|+| |+|.+.. ....++++.++++..+++.+ +. ++++++||
T Consensus 42 ~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 113 (218)
T 1auo_A 42 LTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARS--------ISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGF 113 (218)
T ss_dssp TTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCE--------ECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred CceEEEeCCCCCccccCCCCCcccceecCcCCCcccc--------cchHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEE
Confidence 79999998766 4443322 13567888899999999887 44 48999999
Q ss_pred ChhhHHHHHHHh-hCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC
Q 024971 61 SIGGLVGLQAAV-MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN 139 (260)
Q Consensus 61 S~Gg~~a~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (260)
|+||.+++.+|. ++|++++++|++++.... .. +.
T Consensus 114 S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~----------~~-----------------------------------~~ 148 (218)
T 1auo_A 114 SQGGAVVFHTAFINWQGPLGGVIALSTYAPT----------FG-----------------------------------DE 148 (218)
T ss_dssp THHHHHHHHHHHTTCCSCCCEEEEESCCCTT----------CC-----------------------------------TT
T ss_pred CHHHHHHHHHHHhcCCCCccEEEEECCCCCC----------ch-----------------------------------hh
Confidence 999999999999 999999999999986421 00 00
Q ss_pred CCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC----Ccc
Q 024971 140 DTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS----VED 215 (260)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~ 215 (260)
. ......+++|+++++|++|.+++.+..+.+.+.++ +.+
T Consensus 149 --~-----------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~ 191 (218)
T 1auo_A 149 --L-----------------------------------ELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVT 191 (218)
T ss_dssp --C-----------------------------------CCCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEE
T ss_pred --h-----------------------------------hhhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceE
Confidence 0 00013457999999999999999988877766644 488
Q ss_pred EEEeCCCCCCcchhchhHHHHHHHHhh
Q 024971 216 FIVLPNVGHCPQVSLYLSLSSACLHTL 242 (260)
Q Consensus 216 ~~~~~~~gH~~~~~~p~~~~~~i~~~l 242 (260)
+++++ +||..+.+.++++.+.+.+++
T Consensus 192 ~~~~~-~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 192 WQEYP-MGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp EEEES-CSSSCCHHHHHHHHHHHHHHH
T ss_pred EEEec-CCCccCHHHHHHHHHHHHHHh
Confidence 99999 999999888887777776654
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=138.61 Aligned_cols=144 Identities=17% Similarity=0.090 Sum_probs=110.5
Q ss_pred CccEEEEEcCC-------------------CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cC--CceEEEEe
Q 024971 5 KSHRVYSIDLI-------------------GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VK--DQAFFICN 60 (260)
Q Consensus 5 ~~~~v~~~D~~-------------------G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~lvGh 60 (260)
+||.|+++|+| |+|.+.. ....++++.++++..+++.+ +. ++++++||
T Consensus 52 ~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 123 (226)
T 3cn9_A 52 PSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARA--------IDEDQLNASADQVIALIDEQRAKGIAAERIILAGF 123 (226)
T ss_dssp TTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTC--------BCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred CCcEEEeecCCCCccccCCCCcccccccccccccccc--------ccchhHHHHHHHHHHHHHHHHHcCCCcccEEEEEE
Confidence 79999998777 5553322 24567889999999999887 55 58999999
Q ss_pred ChhhHHHHHHHh-hCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC
Q 024971 61 SIGGLVGLQAAV-MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN 139 (260)
Q Consensus 61 S~Gg~~a~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (260)
|+||.+++.+|. ++|++++++|++++....... +
T Consensus 124 S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~--------------------------------------------~- 158 (226)
T 3cn9_A 124 SQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD--------------------------------------------L- 158 (226)
T ss_dssp THHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG--------------------------------------------C-
T ss_pred CHHHHHHHHHHHhcCccCcceEEEecCcCCCchh--------------------------------------------h-
Confidence 999999999999 999999999999986421100 0
Q ss_pred CCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC----Ccc
Q 024971 140 DTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS----VED 215 (260)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~ 215 (260)
. -....+++|+++++|++|.++|.+..+.+.+.++ +.+
T Consensus 159 ---~-----------------------------------~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~ 200 (226)
T 3cn9_A 159 ---A-----------------------------------LDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVG 200 (226)
T ss_dssp ---C-----------------------------------CCTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEE
T ss_pred ---h-----------------------------------hcccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCcee
Confidence 0 0014567999999999999999988877766644 588
Q ss_pred EEEeCCCCCCcchhchhHHHHHHHH
Q 024971 216 FIVLPNVGHCPQVSLYLSLSSACLH 240 (260)
Q Consensus 216 ~~~~~~~gH~~~~~~p~~~~~~i~~ 240 (260)
+++++ +||..+.+.++++.+.+.+
T Consensus 201 ~~~~~-~gH~~~~~~~~~i~~~l~~ 224 (226)
T 3cn9_A 201 WHDYP-MGHEVSLEEIHDIGAWLRK 224 (226)
T ss_dssp EEEES-CCSSCCHHHHHHHHHHHHH
T ss_pred EEEec-CCCCcchhhHHHHHHHHHh
Confidence 99999 9999988776655544443
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-22 Score=146.71 Aligned_cols=161 Identities=11% Similarity=0.034 Sum_probs=118.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC---CceEEEEeChhhHHHHHHHhhC------
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVME------ 74 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lvGhS~Gg~~a~~~a~~~------ 74 (260)
..||+|+++|+||+|. .++.++++|+.++++.+.. ++++++||||||.+++.++.++
T Consensus 91 ~~G~~v~~~d~~~~~~--------------~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~ 156 (262)
T 2pbl_A 91 SKGWAVAMPSYELCPE--------------VRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAV 156 (262)
T ss_dssp HTTEEEEEECCCCTTT--------------SCHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHH
T ss_pred hCCCEEEEeCCCCCCC--------------CChHHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccc
Confidence 3589999999999863 2577888888888888754 5899999999999999999988
Q ss_pred ccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc
Q 024971 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (260)
Q Consensus 75 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
|++++++|+++|...... .. ... ... .+ .........
T Consensus 157 ~~~v~~~vl~~~~~~~~~----------~~---~~~-----~~~--------------~~--------~~~~~~~~~--- 193 (262)
T 2pbl_A 157 GARIRNVVPISPLSDLRP----------LL---RTS-----MNE--------------KF--------KMDADAAIA--- 193 (262)
T ss_dssp HTTEEEEEEESCCCCCGG----------GG---GST-----THH--------------HH--------CCCHHHHHH---
T ss_pred cccceEEEEecCccCchH----------HH---hhh-----hhh--------------hh--------CCCHHHHHh---
Confidence 899999999998643210 00 000 000 00 000000000
Q ss_pred cCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHH
Q 024971 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
......+.++++|+++++|++|.+++.+..+.+.+.++ +++++++++||+.+.+++++.
T Consensus 194 --------------------~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~ 252 (262)
T 2pbl_A 194 --------------------ESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-ADHVIAFEKHHFNVIEPLADP 252 (262)
T ss_dssp --------------------TCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-CEEEEETTCCTTTTTGGGGCT
T ss_pred --------------------cCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-CeEEEeCCCCcchHHhhcCCC
Confidence 00122456788999999999999999999888888877 899999999999999999888
Q ss_pred HHHHHHhh
Q 024971 235 SSACLHTL 242 (260)
Q Consensus 235 ~~~i~~~l 242 (260)
...+.+++
T Consensus 253 ~~~l~~~l 260 (262)
T 2pbl_A 253 ESDLVAVI 260 (262)
T ss_dssp TCHHHHHH
T ss_pred CcHHHHHH
Confidence 88877765
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-22 Score=138.20 Aligned_cols=160 Identities=11% Similarity=-0.047 Sum_probs=107.2
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
.+|+|+++|+||||. +..+++..+++....++++|+||||||.+|+.+|.++|+.+..++..
T Consensus 32 ~~~~v~~pdl~~~g~------------------~~~~~l~~~~~~~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~ 93 (202)
T 4fle_A 32 PHIEMQIPQLPPYPA------------------EAAEMLESIVMDKAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPA 93 (202)
T ss_dssp TTSEEECCCCCSSHH------------------HHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CCcEEEEeCCCCCHH------------------HHHHHHHHHHHhcCCCcEEEEEEChhhHHHHHHHHHhcccchheeec
Confidence 469999999999973 34567777888888899999999999999999999999876666554
Q ss_pred ccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHH
Q 024971 85 NISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADV 164 (260)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (260)
.++.... ......... .................
T Consensus 94 ~~~~~~~----------------~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~------------ 126 (202)
T 4fle_A 94 VRPFELL----------------SDYLGENQN-------------------PYTGQKYVLESRHIYDL------------ 126 (202)
T ss_dssp SSHHHHG----------------GGGCEEEEC-------------------TTTCCEEEECHHHHHHH------------
T ss_pred cchHHHH----------------HHhhhhhcc-------------------ccccccccchHHHHHHH------------
Confidence 4432110 000000000 00000000001111100
Q ss_pred HHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhhh
Q 024971 165 FLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
. .......++++|+|+|+|++|.++|.+.+..+. +++++.+++|+||.. ++++++.+.|.+||+-
T Consensus 127 ----~------~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~---~~~~l~i~~g~~H~~--~~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 127 ----K------AMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY---TPCRQTVESGGNHAF--VGFDHYFSPIVTFLGL 191 (202)
T ss_dssp ----H------TTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT---TTSEEEEESSCCTTC--TTGGGGHHHHHHHHTC
T ss_pred ----H------hhhhhhhccCceEEEEEeCCCCCCCHHHHHHHh---hCCEEEEECCCCcCC--CCHHHHHHHHHHHHhh
Confidence 0 013345678899999999999999998887764 578999999999963 5677888889999963
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.9e-21 Score=143.40 Aligned_cols=216 Identities=7% Similarity=0.009 Sum_probs=124.0
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
++||.|+++|+||+|.|..... ...+....++|+.++++.+ +.++++++|||+||.+++.+|.++| +
T Consensus 122 ~~G~~v~~~d~~g~g~s~~~~~------~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~ 194 (367)
T 2hdw_A 122 ERGFVTLAFDPSYTGESGGQPR------NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-R 194 (367)
T ss_dssp HTTCEEEEECCTTSTTSCCSSS------SCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-T
T ss_pred HCCCEEEEECCCCcCCCCCcCc------cccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-C
Confidence 3689999999999999986541 2334667778877777766 2458999999999999999999998 5
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC---------C-CCcccHH
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN---------D-TSQVTEE 147 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~ 147 (260)
|+++|+++|........ ..+................ ............+. . ......+
T Consensus 195 ~~~~v~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 262 (367)
T 2hdw_A 195 VKAVVTSTMYDMTRVMS-KGYNDSVTLEQRTRTLEQL-----------GQQRWKDAESGTPAYQPPYNELKGGEAQFLVD 262 (367)
T ss_dssp CCEEEEESCCCHHHHHH-HTTTTCCCHHHHHHHHHHH-----------HHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHH
T ss_pred ccEEEEeccccccHHHh-hhhccccchHHHHHHHHHH-----------HHHHHHHhccCCceeecCCCccccccccccCC
Confidence 99999998752110000 0000000000000000000 00001111111110 0 0001111
Q ss_pred HHHHHhccCC-cc--------chHHHHHHHHhhhCCCCCCccCCCCC-CCEEEEecCCCCCCChHHHHHhhc-cCCCccE
Q 024971 148 LVEKILQPGL-ET--------GAADVFLEFICYSGGPLPEELLPQVK-CPVLIAWGDKDPWEPIELGRAYGN-FDSVEDF 216 (260)
Q Consensus 148 ~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~-~~~~~~~ 216 (260)
....+..... .. ....... .....+....+.+++ +|+|+++|++|. +.+..+.+.+ ..+++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~ 336 (367)
T 2hdw_A 263 YHDYYMTPRGYHPRAVNSGNAWTMTTPL----SFMNMPILTYIKEISPRPILLIHGERAH--SRYFSETAYAAAAEPKEL 336 (367)
T ss_dssp HHHHHTSTTTCCTTCSTTTCCCBTTTHH----HHTTSCSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHHSCSSEEE
T ss_pred ccceeecccccCcccccccchhhhhhHH----HhcCCChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHhCCCCeeE
Confidence 1111111000 00 0000000 011122345677888 999999999998 7777777665 5678899
Q ss_pred EEeCCCCCCcchhchhH-HHHHHHHhhhh
Q 024971 217 IVLPNVGHCPQVSLYLS-LSSACLHTLSY 244 (260)
Q Consensus 217 ~~~~~~gH~~~~~~p~~-~~~~i~~~l~~ 244 (260)
++++++||+.+.+.|+. +.+.+.+|++.
T Consensus 337 ~~~~g~gH~~~~~~~~~~~~~~i~~fl~~ 365 (367)
T 2hdw_A 337 LIVPGASHVDLYDRLDRIPFDRIAGFFDE 365 (367)
T ss_dssp EEETTCCTTHHHHCTTTSCHHHHHHHHHH
T ss_pred EEeCCCCeeeeecCchhHHHHHHHHHHHh
Confidence 99999999988887776 58888888864
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-22 Score=147.13 Aligned_cols=170 Identities=12% Similarity=0.004 Sum_probs=109.5
Q ss_pred CCccEEEEEcCCCCCCCC--CCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCccc--
Q 024971 4 AKSHRVYSIDLIGYGYSD--KPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEI-- 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~-- 77 (260)
.+||.|+++|+||+|.+. .+. ...++.+.++.+.+..+.++. ++++++||||||.+++.++.++|++
T Consensus 78 ~~G~~v~~~d~~g~~~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~ 150 (283)
T 3bjr_A 78 GHGYQAFYLEYTLLTDQQPLGLA-------PVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVA 150 (283)
T ss_dssp TTTCEEEEEECCCTTTCSSCBTH-------HHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHH
T ss_pred hCCcEEEEEeccCCCccccCchh-------HHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccch
Confidence 468999999999999873 211 111222333333333333343 4899999999999999999999977
Q ss_pred -----------hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccH
Q 024971 78 -----------CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTE 146 (260)
Q Consensus 78 -----------v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (260)
++++++++|....... +.... ..+...+.
T Consensus 151 ~~~~~~~~~~~~~~~v~~~p~~~~~~~---------~~~~~------------------------~~~~~~~~------- 190 (283)
T 3bjr_A 151 TELNVTPAMLKPNNVVLGYPVISPLLG---------FPKDD------------------------ATLATWTP------- 190 (283)
T ss_dssp HHHTCCHHHHCCSSEEEESCCCCTTSB---------C--------------------------------CCCC-------
T ss_pred hhcCCCcCCCCccEEEEcCCccccccc---------ccccc------------------------chHHHHHH-------
Confidence 8899998886432100 00000 00000000
Q ss_pred HHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC----CCccEEEeCCC
Q 024971 147 ELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----SVEDFIVLPNV 222 (260)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~ 222 (260)
. .........+.++++|+++++|++|.++|.+..+.+.+.+ .++++++++++
T Consensus 191 --------~----------------~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~ 246 (283)
T 3bjr_A 191 --------T----------------PNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHG 246 (283)
T ss_dssp --------C----------------GGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred --------H----------------hHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 0 0000112345677899999999999999988777766553 34689999999
Q ss_pred CCCcchhch-------------hHHHHHHHHhhhh
Q 024971 223 GHCPQVSLY-------------LSLSSACLHTLSY 244 (260)
Q Consensus 223 gH~~~~~~p-------------~~~~~~i~~~l~~ 244 (260)
||.+..+.+ +++.+.+.+||+.
T Consensus 247 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 281 (283)
T 3bjr_A 247 PHGLALANAQTAWKPDANQPHVAHWLTLALEWLAD 281 (283)
T ss_dssp SHHHHHHHHHHSCC-------CCHHHHHHHHHHHH
T ss_pred CcccccccccccccccccchhHHHHHHHHHHHHhh
Confidence 997776665 6788888888864
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=7.2e-22 Score=139.66 Aligned_cols=148 Identities=15% Similarity=0.081 Sum_probs=104.2
Q ss_pred CCCccEEEEE--cCCCCCCCCCCCCCCCCCCCCccHHHHHHHH---HHHH----Hhh--cCCceEEEEeChhhHHHHHHH
Q 024971 3 LAKSHRVYSI--DLIGYGYSDKPNPRDFFDKPFYTFETWASQL---NDFC----KDV--VKDQAFFICNSIGGLVGLQAA 71 (260)
Q Consensus 3 L~~~~~v~~~--D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~--~~~~~~lvGhS~Gg~~a~~~a 71 (260)
|++||.|+++ |+||+|.|....... ...++..++.+++ .+++ +.. +.++++++|||+||.+++.++
T Consensus 61 l~~g~~v~~~~~d~~g~g~s~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 137 (226)
T 2h1i_A 61 VDSEASVLSVRGNVLENGMPRFFRRLA---EGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLL 137 (226)
T ss_dssp HHTTSCEEEECCSEEETTEEESSCEEE---TTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHH
T ss_pred hccCceEEEecCcccCCcchhhccccC---ccCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHH
Confidence 5569999999 999999885432100 1234555555443 3333 333 447899999999999999999
Q ss_pred hhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHH
Q 024971 72 VMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEK 151 (260)
Q Consensus 72 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
.++|++++++|+++|......
T Consensus 138 ~~~~~~~~~~v~~~~~~~~~~----------------------------------------------------------- 158 (226)
T 2h1i_A 138 FHYENALKGAVLHHPMVPRRG----------------------------------------------------------- 158 (226)
T ss_dssp HHCTTSCSEEEEESCCCSCSS-----------------------------------------------------------
T ss_pred HhChhhhCEEEEeCCCCCcCc-----------------------------------------------------------
Confidence 999999999999998642100
Q ss_pred HhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC----CccEEEeCCCCCCcc
Q 024971 152 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS----VEDFIVLPNVGHCPQ 227 (260)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~ 227 (260)
......+++|+++++|++|.+++.+..+.+.+.++ +.++ +++++||...
T Consensus 159 --------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~ 211 (226)
T 2h1i_A 159 --------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLT 211 (226)
T ss_dssp --------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCC
T ss_pred --------------------------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC
Confidence 01122357999999999999999888777766543 3455 8999999987
Q ss_pred hhchhHHHHHHH
Q 024971 228 VSLYLSLSSACL 239 (260)
Q Consensus 228 ~~~p~~~~~~i~ 239 (260)
.+.++.+.+.+.
T Consensus 212 ~~~~~~~~~~l~ 223 (226)
T 2h1i_A 212 MGEVEKAKEWYD 223 (226)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 665555444443
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=9.7e-21 Score=137.98 Aligned_cols=171 Identities=10% Similarity=-0.009 Sum_probs=103.5
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh---hc--CCceEEEEeChhhHHHHHHHhhC----
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VV--KDQAFFICNSIGGLVGLQAAVME---- 74 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~lvGhS~Gg~~a~~~a~~~---- 74 (260)
++||.|+++|+||+|.+.. . .....++..+.+..+.+. ++ .++++++||||||.+|+.++.++
T Consensus 63 ~~G~~v~~~d~~g~g~~~~-~-------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~ 134 (277)
T 3bxp_A 63 AAGMHTVVLNYQLIVGDQS-V-------YPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPE 134 (277)
T ss_dssp HTTCEEEEEECCCSTTTCC-C-------TTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHH
T ss_pred HCCCEEEEEecccCCCCCc-c-------CchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcc
Confidence 3689999999999994332 1 122333443333333332 23 35899999999999999999885
Q ss_pred ----------ccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcc
Q 024971 75 ----------PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV 144 (260)
Q Consensus 75 ----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (260)
+.+++++|+++|....... .... ....
T Consensus 135 ~~~~~~~~~~~~~~~~~v~~~p~~~~~~~-----~~~~-------------------------~~~~------------- 171 (277)
T 3bxp_A 135 LRTRYHLDHYQGQHAAIILGYPVIDLTAG-----FPTT-------------------------SAAR------------- 171 (277)
T ss_dssp HHHHTTCTTCCCCCSEEEEESCCCBTTSS-----SSSS-------------------------HHHH-------------
T ss_pred cccccCcccccCCcCEEEEeCCcccCCCC-----CCCc-------------------------cccc-------------
Confidence 6789999999987532110 0000 0000
Q ss_pred cHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeC
Q 024971 145 TEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLP 220 (260)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~ 220 (260)
..+... .........+.++.+|+|+++|++|.++|.+..+.+.+. ..++++++++
T Consensus 172 -----~~~~~~----------------~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~ 230 (277)
T 3bxp_A 172 -----NQITTD----------------ARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFG 230 (277)
T ss_dssp -----HHHCSC----------------GGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred -----hhccch----------------hhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeC
Confidence 000000 000011234556778999999999999998877765554 3456899999
Q ss_pred CCCCCcchhc---------------hhHHHHHHHHhhhhcc
Q 024971 221 NVGHCPQVSL---------------YLSLSSACLHTLSYLH 246 (260)
Q Consensus 221 ~~gH~~~~~~---------------p~~~~~~i~~~l~~~~ 246 (260)
++||...... ++++.+.+.+||+...
T Consensus 231 ~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 231 SGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp CC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 9999544332 4677888888886543
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.4e-21 Score=136.06 Aligned_cols=163 Identities=12% Similarity=0.018 Sum_probs=112.3
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCC----CCCCccHHHHHHHHHHHHHhhc-----CCceEEEEeChhhHHHHHHHhhC
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFF----DKPFYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
++||.|+++|+||+|.+......... .....+.....+|+.++++.+. .++++++||||||.+++.++.++
T Consensus 57 ~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~ 136 (241)
T 3f67_A 57 QEGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHN 136 (241)
T ss_dssp HTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTC
T ss_pred HCCcEEEEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhC
Confidence 46899999999999877554310000 0012244567888888888774 45799999999999999999999
Q ss_pred ccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc
Q 024971 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (260)
Q Consensus 75 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
|+ +.+++++.+....... ....
T Consensus 137 ~~-~~~~v~~~~~~~~~~~----------------------------------------------~~~~----------- 158 (241)
T 3f67_A 137 PQ-LKAAVAWYGKLVGEKS----------------------------------------------LNSP----------- 158 (241)
T ss_dssp TT-CCEEEEESCCCSCCCC----------------------------------------------SSSC-----------
T ss_pred cC-cceEEEEeccccCCCc----------------------------------------------cCCc-----------
Confidence 87 7777776654211000 0000
Q ss_pred cCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC----CCccEEEeCCCCCCcch--
Q 024971 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----SVEDFIVLPNVGHCPQV-- 228 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-- 228 (260)
......+.++++|+++++|++|.++|.+..+.+.+.+ +++++++++++||.+..
T Consensus 159 --------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 218 (241)
T 3f67_A 159 --------------------KHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADY 218 (241)
T ss_dssp --------------------CCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTT
T ss_pred --------------------cCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCC
Confidence 0001234556799999999999999988777766553 67899999999997753
Q ss_pred ------hchhHHHHHHHHhhhh
Q 024971 229 ------SLYLSLSSACLHTLSY 244 (260)
Q Consensus 229 ------~~p~~~~~~i~~~l~~ 244 (260)
+..+++.+.+.+||+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 219 RASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp STTCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHHhh
Confidence 3346677777777753
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-20 Score=138.58 Aligned_cols=188 Identities=15% Similarity=0.108 Sum_probs=113.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCC-CC-----------------CCCCCCccHHHHHHHHHHHHHhh------cCCceEEEE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNP-RD-----------------FFDKPFYTFETWASQLNDFCKDV------VKDQAFFIC 59 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG 59 (260)
++||.|+++|+||+|.|..... .. ......+++....+|+.++++.+ +.++++++|
T Consensus 119 ~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G 198 (337)
T 1vlq_A 119 SMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAG 198 (337)
T ss_dssp HTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEE
T ss_pred hCCCEEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 4799999999999997754210 00 00112345567788888888777 235899999
Q ss_pred eChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC
Q 024971 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN 139 (260)
Q Consensus 60 hS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (260)
||+||.+++.+|..+| +++++|+++|..... ............ ..+...+...
T Consensus 199 ~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~~-------------~~~~~~~~~~~~-----------~~~~~~~~~~-- 251 (337)
T 1vlq_A 199 GSQGGGIALAVSALSK-KAKALLCDVPFLCHF-------------RRAVQLVDTHPY-----------AEITNFLKTH-- 251 (337)
T ss_dssp ETHHHHHHHHHHHHCS-SCCEEEEESCCSCCH-------------HHHHHHCCCTTH-----------HHHHHHHHHC--
T ss_pred eCHHHHHHHHHHhcCC-CccEEEECCCcccCH-------------HHHHhcCCCcch-----------HHHHHHHHhC--
Confidence 9999999999999998 599999988853210 000000000000 0000011000
Q ss_pred CCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEE
Q 024971 140 DTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIV 218 (260)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~ 218 (260)
.......... .. ..+....+.++++|+|+++|++|.++|++....+.+.++ ++++++
T Consensus 252 --~~~~~~~~~~-----------------~~---~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~ 309 (337)
T 1vlq_A 252 --RDKEEIVFRT-----------------LS---YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRI 309 (337)
T ss_dssp --TTCHHHHHHH-----------------HH---TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEE
T ss_pred --chhHHHHHHh-----------------hh---hccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEE
Confidence 0000111100 00 011122345678999999999999999998888777765 488999
Q ss_pred eCCCCCCcchhchhHHHHHHHHhhh
Q 024971 219 LPNVGHCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 219 ~~~~gH~~~~~~p~~~~~~i~~~l~ 243 (260)
++++||....+ +..+.+.+|++
T Consensus 310 ~~~~gH~~~~~---~~~~~~~~fl~ 331 (337)
T 1vlq_A 310 YPYNNHEGGGS---FQAVEQVKFLK 331 (337)
T ss_dssp ETTCCTTTTHH---HHHHHHHHHHH
T ss_pred cCCCCCCCcch---hhHHHHHHHHH
Confidence 99999985432 33455555553
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=137.46 Aligned_cols=169 Identities=12% Similarity=-0.008 Sum_probs=112.5
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---------cCCceEEEEeChhhHHHHHHHhh-
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---------VKDQAFFICNSIGGLVGLQAAVM- 73 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~lvGhS~Gg~~a~~~a~~- 73 (260)
++||.|+++|+||+|.|.... +.....+|+..+++.+ +.++++++||||||.+++.++.+
T Consensus 71 ~~G~~v~~~d~~g~g~s~~~~----------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (276)
T 3hxk_A 71 AQGYQVLLLNYTVMNKGTNYN----------FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSE 140 (276)
T ss_dssp HTTCEEEEEECCCTTSCCCSC----------THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSC
T ss_pred HCCCEEEEecCccCCCcCCCC----------cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhc
Confidence 469999999999999987433 3334444444444333 23589999999999999999998
Q ss_pred CccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHh
Q 024971 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (260)
Q Consensus 74 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (260)
.+.+++++|+++|.......... .... ...+ .... .
T Consensus 141 ~~~~~~~~v~~~p~~~~~~~~~~----~~~~------------------------------~~~~--~~~~-----~--- 176 (276)
T 3hxk_A 141 QIHRPKGVILCYPVTSFTFGWPS----DLSH------------------------------FNFE--IENI-----S--- 176 (276)
T ss_dssp STTCCSEEEEEEECCBTTSSCSS----SSSS------------------------------SCCC--CSCC-----G---
T ss_pred cCCCccEEEEecCcccHHhhCCc----chhh------------------------------hhcC--chhh-----h---
Confidence 78899999999987543211000 0000 0000 0000 0
Q ss_pred ccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCcchh
Q 024971 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQVS 229 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~~ 229 (260)
.......+.++++|+++++|++|.++|.+..+.+.+. ..++++++++++||.....
T Consensus 177 --------------------~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 236 (276)
T 3hxk_A 177 --------------------EYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLA 236 (276)
T ss_dssp --------------------GGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTC
T ss_pred --------------------hCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCcccc
Confidence 0011334567789999999999999998877665544 3456899999999976654
Q ss_pred ch-------------hHHHHHHHHhhhhcc
Q 024971 230 LY-------------LSLSSACLHTLSYLH 246 (260)
Q Consensus 230 ~p-------------~~~~~~i~~~l~~~~ 246 (260)
.+ +++.+.+.+||+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 237 NRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp STTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred CccccccccccCchHHHHHHHHHHHHHhCc
Confidence 44 567777777776543
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=144.13 Aligned_cols=194 Identities=10% Similarity=-0.004 Sum_probs=116.8
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc--CCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
++||+|+++|+||+|.+.... .....+++.+.+..+.++.+ .++++++||||||.+++.+|.++|+ |+++
T Consensus 181 ~~Gy~V~a~D~rG~g~~~~~~-------~~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~ 252 (422)
T 3k2i_A 181 GHGFATLALAYYNFEDLPNNM-------DNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSAT 252 (422)
T ss_dssp TTTCEEEEEECSSSTTSCSSC-------SCEETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEE
T ss_pred hCCCEEEEEccCCCCCCCCCc-------ccCCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEE
Confidence 469999999999999886654 34566777666665555543 4789999999999999999999998 9999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++....... .+.... ........ .... ......... .+.........
T Consensus 253 V~~~~~~~~~~~---~~~~~~------~~~~~~~~---------~~~~------~~~~~~~~~------~~~~~~~~~~~ 302 (422)
T 3k2i_A 253 VSINGSGISGNT---AINYKH------SSIPPLGY---------DLRR------IKVAFSGLV------DIVDIRNALVG 302 (422)
T ss_dssp EEESCCSBCCSS---CEEETT------EEECCCCB---------CGGG------CEECTTSCE------ECTTCBCCCTT
T ss_pred EEEcCcccccCC---chhhcC------CcCCCccc---------chhh------cccCcchhH------HHHHHHhhhhh
Confidence 999987532110 000000 00000000 0000 000000000 00000000000
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHH-HHhh----cc-CCCccEEEeCCCCCCc---------
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYG----NF-DSVEDFIVLPNVGHCP--------- 226 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~----~~-~~~~~~~~~~~~gH~~--------- 226 (260)
.........+.++++|+|+++|++|.++|.+.. +.+. +. .+++++++++++||.+
T Consensus 303 ----------~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~ 372 (422)
T 3k2i_A 303 ----------GYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCP 372 (422)
T ss_dssp ----------GGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTTCCCCC
T ss_pred ----------cccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCCCCcch
Confidence 000111234677899999999999999998744 3333 33 2348899999999987
Q ss_pred -------------------chhchhHHHHHHHHhhhhc
Q 024971 227 -------------------QVSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 227 -------------------~~~~p~~~~~~i~~~l~~~ 245 (260)
+.+.++++.+.+.+|++..
T Consensus 373 ~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~ 410 (422)
T 3k2i_A 373 ASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKH 410 (422)
T ss_dssp EEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 3356788888999998643
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=9.1e-20 Score=135.33 Aligned_cols=190 Identities=14% Similarity=0.051 Sum_probs=114.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCC-----------CCCCCCccHHHHHHHHHHHHHhhc------CCceEEEEeChhhHH
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRD-----------FFDKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLV 66 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~lvGhS~Gg~~ 66 (260)
++||.|+++|+||+|.|....... ......+.+...++|+.++++.+. .++++++|||+||.+
T Consensus 107 ~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~ 186 (318)
T 1l7a_A 107 LHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGL 186 (318)
T ss_dssp HTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHH
T ss_pred hCCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHH
Confidence 469999999999999997653100 000123345677788777777663 258999999999999
Q ss_pred HHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccH
Q 024971 67 GLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTE 146 (260)
Q Consensus 67 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (260)
++.+|..+|+ +.++|+++|..... ........... .......+.... ..
T Consensus 187 a~~~a~~~~~-~~~~v~~~p~~~~~-------------~~~~~~~~~~~-----------~~~~~~~~~~~~------~~ 235 (318)
T 1l7a_A 187 TIAAAALSDI-PKAAVADYPYLSNF-------------ERAIDVALEQP-----------YLEINSFFRRNG------SP 235 (318)
T ss_dssp HHHHHHHCSC-CSEEEEESCCSCCH-------------HHHHHHCCSTT-----------TTHHHHHHHHSC------CH
T ss_pred HHHHhccCCC-ccEEEecCCcccCH-------------HHHHhcCCcCc-----------cHHHHHHHhccC------Cc
Confidence 9999999986 88888877753210 00000000000 000000000000 00
Q ss_pred HHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCCCCC
Q 024971 147 ELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHC 225 (260)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~ 225 (260)
..... ... .....+....+.++++|+++++|++|.+++.+..+.+.+.+++ +++++++++||.
T Consensus 236 ~~~~~-------------~~~---~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~ 299 (318)
T 1l7a_A 236 ETEVQ-------------AMK---TLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHE 299 (318)
T ss_dssp HHHHH-------------HHH---HHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSS
T ss_pred ccHHH-------------HHH---hhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCC
Confidence 00000 000 0000111234566789999999999999999988888777654 889999999999
Q ss_pred cchhchhHHHHHHHHhhhh
Q 024971 226 PQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 226 ~~~~~p~~~~~~i~~~l~~ 244 (260)
.. .+..+.+.+|++.
T Consensus 300 ~~----~~~~~~~~~fl~~ 314 (318)
T 1l7a_A 300 YI----PAFQTEKLAFFKQ 314 (318)
T ss_dssp CC----HHHHHHHHHHHHH
T ss_pred Cc----chhHHHHHHHHHH
Confidence 43 3456666666643
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.5e-20 Score=138.02 Aligned_cols=189 Identities=14% Similarity=0.039 Sum_probs=114.5
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh------hcCC-ceEEEEeChhhHHHHHHHhhCcc-
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD------VVKD-QAFFICNSIGGLVGLQAAVMEPE- 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~lvGhS~Gg~~a~~~a~~~p~- 76 (260)
.||.|+++|+||.+.+..+ ..+++..+.+..+.+. ++.+ +++++|||+||.+|+.+|.++|+
T Consensus 145 ~g~~vv~~d~rg~~~~~~~----------~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~ 214 (351)
T 2zsh_A 145 CKCVVVSVNYRRAPENPYP----------CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES 214 (351)
T ss_dssp HTSEEEEECCCCTTTSCTT----------HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEecCCCCCCCCCc----------hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhcc
Confidence 5899999999998765432 2455555555555543 3456 89999999999999999999998
Q ss_pred --chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc
Q 024971 77 --ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (260)
Q Consensus 77 --~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
+++++|+++|...... . ............ .......... ..+..
T Consensus 215 ~~~v~~~vl~~p~~~~~~--------~--~~~~~~~~~~~~---------~~~~~~~~~~---------------~~~~~ 260 (351)
T 2zsh_A 215 GIDVLGNILLNPMFGGNE--------R--TESEKSLDGKYF---------VTVRDRDWYW---------------KAFLP 260 (351)
T ss_dssp TCCCCEEEEESCCCCCSS--------C--CHHHHHHTTTSS---------CCHHHHHHHH---------------HHHSC
T ss_pred CCCeeEEEEECCccCCCc--------C--ChhhhhcCCCcc---------cCHHHHHHHH---------------HHhCC
Confidence 8999999998643210 0 000000000000 0000001011 11110
Q ss_pred cCCccchHHHHHHHHhhhCCCCCCccCCCCCC-CEEEEecCCCCCCChH--HHHHhhccCCCccEEEeCCCCCCcch---
Q 024971 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKC-PVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQV--- 228 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~--- 228 (260)
........ ...........+.++++ |+|+++|++|.+++.. ..+.+.+...++++++++++||.++.
T Consensus 261 ~~~~~~~~-------~~~~~~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~ 333 (351)
T 2zsh_A 261 EGEDREHP-------ACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPN 333 (351)
T ss_dssp TTCCTTST-------TTCTTSTTSCCCTTCCCCEEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSC
T ss_pred CCCCCCCc-------ccCCCCCCccchhhCCCCCEEEEEcCCCcchHHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCC
Confidence 00000000 00000001245666677 9999999999987632 33445555557899999999998876
Q ss_pred -hchhHHHHHHHHhhhh
Q 024971 229 -SLYLSLSSACLHTLSY 244 (260)
Q Consensus 229 -~~p~~~~~~i~~~l~~ 244 (260)
++++++.+.|.+|++.
T Consensus 334 ~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 334 NNHFHNVMDEISAFVNA 350 (351)
T ss_dssp SHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhcC
Confidence 8899999999999863
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=140.77 Aligned_cols=187 Identities=11% Similarity=0.006 Sum_probs=115.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccc----hhh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI----CRG 80 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~----v~~ 80 (260)
.||+|+++|+||.+... ....+++..+.+..+++.++.++++|+||||||.+|+.+|.++|++ +++
T Consensus 126 ~g~~vi~~D~r~~~~~~----------~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~ 195 (326)
T 3d7r_A 126 TLYEVVLPIYPKTPEFH----------IDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNK 195 (326)
T ss_dssp HCSEEEEECCCCTTTSC----------HHHHHHHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSE
T ss_pred hCCEEEEEeCCCCCCCC----------chHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCe
Confidence 38999999999865432 2346777888888888888888999999999999999999998887 999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|+++|......... ......... ... ......... ...+........
T Consensus 196 lvl~~p~~~~~~~~~------~~~~~~~~~--~~~---------~~~~~~~~~---------------~~~~~~~~~~~~ 243 (326)
T 3d7r_A 196 LYLISPILDATLSNK------DISDALIEQ--DAV---------LSQFGVNEI---------------MKKWANGLPLTD 243 (326)
T ss_dssp EEEESCCCCTTCCCT------TCCHHHHHH--CSS---------CCHHHHHHH---------------HHHHHTTSCTTS
T ss_pred EEEECcccccCcCCh------hHHhhhccc--Ccc---------cCHHHHHHH---------------HHHhcCCCCCCC
Confidence 999998753321000 000000000 000 000000000 000000000000
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH--HHHHhhccCCCccEEEeCCCCCCcch---hchhHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQV---SLYLSLS 235 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~---~~p~~~~ 235 (260)
. . .......+.. -+|+++++|++|..++.. ..+.+.+..+++++++++++||..+. ++++++.
T Consensus 244 ~----------~-~~~~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~ 311 (326)
T 3d7r_A 244 K----------R-ISPINGTIEG-LPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAI 311 (326)
T ss_dssp T----------T-TSGGGSCCTT-CCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHH
T ss_pred C----------e-ECcccCCccc-CCCEEEEEeCcccchHHHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHH
Confidence 0 0 0000111222 269999999999755422 33445555677899999999999887 8899999
Q ss_pred HHHHHhhhhc
Q 024971 236 SACLHTLSYL 245 (260)
Q Consensus 236 ~~i~~~l~~~ 245 (260)
+.|.+|++..
T Consensus 312 ~~i~~fl~~~ 321 (326)
T 3d7r_A 312 KQIAKSIDED 321 (326)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHHHHHHH
Confidence 9999999653
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.8e-21 Score=141.53 Aligned_cols=200 Identities=11% Similarity=-0.001 Sum_probs=126.6
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-cCCceEEEEeChhhHHHHHHHhh---Cccc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVM---EPEI 77 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~---~p~~ 77 (260)
.|+.+|+|+++|+||+|.+... ..+++++++++.+.+..+ +.++++|+||||||.+|+.+|.+ +|++
T Consensus 123 ~L~~~~~v~~~d~~g~~~~~~~---------~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~ 193 (329)
T 3tej_A 123 YLDPQWSIIGIQSPRPNGPMQT---------AANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRARGEQ 193 (329)
T ss_dssp TSCTTCEEEEECCCTTTSHHHH---------CSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCCCeEEEeeCCCCCCCCCC---------CCCHHHHHHHHHHHHHHhCCCCCEEEEEEccCHHHHHHHHHHHHhcCCc
Confidence 4678999999999999987643 248999999988888776 55799999999999999999998 9999
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
|.+++++++.+............. ... ....... .....+...... .........+.
T Consensus 194 v~~lvl~d~~~~~~~~~~~~~~~~---------~~~-~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~---- 250 (329)
T 3tej_A 194 VAFLGLLDTWPPETQNWQEKEANG---------LDP-EVLAEIN------REREAFLAAQQG---STSTELFTTIE---- 250 (329)
T ss_dssp EEEEEEESCCCTHHHHTC-----C---------CCC-THHHHHH------HHHHHHHHTTCC---CSCCHHHHHHH----
T ss_pred ccEEEEeCCCCCCccccccccccc---------cCh-hhHHHHH------HHHHHHHHhccc---cccHHHHHHHH----
Confidence 999999998754321000000000 000 0000000 000001111010 01111111111
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhch--hHHH
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLY--LSLS 235 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p--~~~~ 235 (260)
..+........ ......+++|++++.|++|...+.+....+.+..++.+++.++ +||+.+.+.| ++++
T Consensus 251 -----~~~~~~~~~~~----~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~~~~~~~v~-g~H~~~~~~~~~~~ia 320 (329)
T 3tej_A 251 -----GNYADAVRLLT----TAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQD-CAHVDIISPGTFEKIG 320 (329)
T ss_dssp -----HHHHHHHHHHT----TCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEEEEEEEEES-SCGGGGGSTTTHHHHH
T ss_pred -----HHHHHHHHHHh----cCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhcCCcEEEEec-CChHHhCCChHHHHHH
Confidence 11111111111 1124567899999999999877766666777777888999998 7999888776 7899
Q ss_pred HHHHHhhh
Q 024971 236 SACLHTLS 243 (260)
Q Consensus 236 ~~i~~~l~ 243 (260)
+.|.+|++
T Consensus 321 ~~l~~~L~ 328 (329)
T 3tej_A 321 PIIRATLN 328 (329)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99998875
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=149.55 Aligned_cols=184 Identities=14% Similarity=0.122 Sum_probs=119.7
Q ss_pred CCccEEEEEcCCC---CCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIG---YGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G---~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
++||.|+++|+|| +|.+....... ......++++.+.+..+++....++++++||||||.+++.+|.++|+++++
T Consensus 387 ~~G~~v~~~d~rG~~~~G~s~~~~~~~--~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~ 464 (582)
T 3o4h_A 387 AAGFHVVMPNYRGSTGYGEEWRLKIIG--DPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKA 464 (582)
T ss_dssp HTTCEEEEECCTTCSSSCHHHHHTTTT--CTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSC
T ss_pred hCCCEEEEeccCCCCCCchhHHhhhhh--hcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEE
Confidence 4689999999999 66552211000 012334555655555555554445899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|+++|..... .+ ... .......+....+. ...+
T Consensus 465 ~v~~~~~~~~~--------------~~---~~~------------~~~~~~~~~~~~~~----~~~~------------- 498 (582)
T 3o4h_A 465 GVAGASVVDWE--------------EM---YEL------------SDAAFRNFIEQLTG----GSRE------------- 498 (582)
T ss_dssp EEEESCCCCHH--------------HH---HHT------------CCHHHHHHHHHHTT----TCHH-------------
T ss_pred EEEcCCccCHH--------------HH---hhc------------ccchhHHHHHHHcC----cCHH-------------
Confidence 99999853211 00 000 00000001111110 0000
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC----CccEEEeCCCCCCcc-hhchhHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS----VEDFIVLPNVGHCPQ-VSLYLSLS 235 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~ 235 (260)
.+.. ..+...+.++++|+|+++|++|..+|++..+.+.+.++ ++++++++++||.+. .++++++.
T Consensus 499 ---~~~~-------~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~ 568 (582)
T 3o4h_A 499 ---IMRS-------RSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKIL 568 (582)
T ss_dssp ---HHHH-------TCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHH
T ss_pred ---HHHh-------cCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHH
Confidence 0000 01134466788999999999999999988877666543 478999999999887 67888999
Q ss_pred HHHHHhhhhc
Q 024971 236 SACLHTLSYL 245 (260)
Q Consensus 236 ~~i~~~l~~~ 245 (260)
+.+.+|++..
T Consensus 569 ~~i~~fl~~~ 578 (582)
T 3o4h_A 569 LPAVFFLATQ 578 (582)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999653
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.6e-21 Score=156.12 Aligned_cols=178 Identities=11% Similarity=0.014 Sum_probs=117.5
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
++||.|+++|+||+|.|........ ...+. ....+|+.++++.+ +.++++++||||||.+++.+|.++|++
T Consensus 517 ~~G~~v~~~d~rG~g~s~~~~~~~~--~~~~~-~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~ 593 (706)
T 2z3z_A 517 QKGYAVFTVDSRGSANRGAAFEQVI--HRRLG-QTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDV 593 (706)
T ss_dssp HTTCEEEEECCTTCSSSCHHHHHTT--TTCTT-HHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTT
T ss_pred hCCcEEEEEecCCCcccchhHHHHH--hhccC-CccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCc
Confidence 3689999999999998865321000 01111 12334555555444 245899999999999999999999999
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
++++|+++|...... .. . .+. ..++ .... ...+.
T Consensus 594 ~~~~v~~~~~~~~~~----------~~----~---------~~~---------~~~~----~~~~-~~~~~--------- 627 (706)
T 2z3z_A 594 FKVGVAGGPVIDWNR----------YA----I---------MYG---------ERYF----DAPQ-ENPEG--------- 627 (706)
T ss_dssp EEEEEEESCCCCGGG----------SB----H---------HHH---------HHHH----CCTT-TCHHH---------
T ss_pred EEEEEEcCCccchHH----------HH----h---------hhh---------hhhc----CCcc-cChhh---------
Confidence 999999998642110 00 0 000 0000 0000 00110
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC----CCccEEEeCCCCCCcchhchhH
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----SVEDFIVLPNVGHCPQVSLYLS 233 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~p~~ 233 (260)
+... .....+.++++|+|+++|++|..+|.+..+.+.+.+ .+.++.+++++||.+..+++++
T Consensus 628 -------~~~~-------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~ 693 (706)
T 2z3z_A 628 -------YDAA-------NLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVH 693 (706)
T ss_dssp -------HHHH-------CGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHH
T ss_pred -------hhhC-------CHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHH
Confidence 0000 113456678899999999999999988877766553 3468999999999998889999
Q ss_pred HHHHHHHhhhh
Q 024971 234 LSSACLHTLSY 244 (260)
Q Consensus 234 ~~~~i~~~l~~ 244 (260)
+.+.+.+|++.
T Consensus 694 ~~~~i~~fl~~ 704 (706)
T 2z3z_A 694 LYETITRYFTD 704 (706)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999864
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.1e-20 Score=141.42 Aligned_cols=77 Identities=17% Similarity=0.138 Sum_probs=62.8
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
++||.|+++|+||+|.+.... ....++++.+.+..+.+..+. ++++++||||||.+++.+|.++|+ |+++
T Consensus 197 ~~Gy~Vla~D~rG~~~~~~~~-------~~~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~ 268 (446)
T 3hlk_A 197 GKGFAVMALAYYNYEDLPKTM-------ETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAA 268 (446)
T ss_dssp TTTCEEEEECCSSSTTSCSCC-------SEEEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEE
T ss_pred hCCCEEEEeccCCCCCCCcch-------hhCCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEE
Confidence 469999999999999887654 345677776666666555443 689999999999999999999998 9999
Q ss_pred eEeccCc
Q 024971 82 ILLNISL 88 (260)
Q Consensus 82 vl~~~~~ 88 (260)
|++++..
T Consensus 269 V~~~~~~ 275 (446)
T 3hlk_A 269 VVINGSV 275 (446)
T ss_dssp EEESCCS
T ss_pred EEEcCcc
Confidence 9998865
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.9e-20 Score=136.37 Aligned_cols=193 Identities=11% Similarity=0.112 Sum_probs=123.7
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhCc----c
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEP----E 76 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p----~ 76 (260)
.|..+++|+++|+||+|.|...... ....+++++++++.+.++.+. .++++++||||||.+|+.+|.+.+ +
T Consensus 113 ~L~~~~~v~~~d~~G~g~~~~~~~~----~~~~~~~~~a~~~~~~i~~~~~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~ 188 (319)
T 2hfk_A 113 SFQEERDFLAVPLPGYGTGTGTGTA----LLPADLDTALDAQARAILRAAGDAPVVLLGHAGGALLAHELAFRLERAHGA 188 (319)
T ss_dssp TTTTTCCEEEECCTTCCBC---CBC----CEESSHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSC
T ss_pred hcCCCCceEEecCCCCCCCcccccC----CCCCCHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHHhhCC
Confidence 4678999999999999997210000 134789999999999998874 578999999999999999998875 4
Q ss_pred chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 77 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+|++++++++..... .. .+..+.. .+ ....+...+. .........
T Consensus 189 ~v~~lvl~d~~~~~~---------~~---~~~~~~~------~l---------~~~~~~~~~~---~~~~~~~~~----- 233 (319)
T 2hfk_A 189 PPAGIVLVDPYPPGH---------QE---PIEVWSR------QL---------GEGLFAGELE---PMSDARLLA----- 233 (319)
T ss_dssp CCSEEEEESCCCTTS---------CH---HHHHTHH------HH---------HHHHHHTCSS---CCCHHHHHH-----
T ss_pred CceEEEEeCCCCCCc---------hh---HHHHHHH------Hh---------hHHHHHhhcc---ccchHHHHH-----
Confidence 599999999864211 00 0100000 00 0001111000 011111100
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH-HHHhhccCC-CccEEEeCCCCCCcch-hchhH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDS-VEDFIVLPNVGHCPQV-SLYLS 233 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~-~~~~~~~~~~gH~~~~-~~p~~ 233 (260)
...+..... ......+++|+++++| +|..++.+. ...+.+..+ +.+++.++ +||+.++ +++++
T Consensus 234 -----~~~~~~~~~-------~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~H~~~~~e~~~~ 299 (319)
T 2hfk_A 234 -----MGRYARFLA-------GPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVP-GDHFTMMRDHAPA 299 (319)
T ss_dssp -----HHHHHHHHH-------SCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTHHHHTCHHH
T ss_pred -----HHHHHHHHH-------hCCCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeC-CCcHHHHHHhHHH
Confidence 011111111 1124678999999999 998887765 555666554 57899999 5999654 79999
Q ss_pred HHHHHHHhhhhccc
Q 024971 234 LSSACLHTLSYLHT 247 (260)
Q Consensus 234 ~~~~i~~~l~~~~~ 247 (260)
+++.|.+|++....
T Consensus 300 ~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 300 VAEAVLSWLDAIEG 313 (319)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999976543
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.83 E-value=7.8e-20 Score=136.96 Aligned_cols=195 Identities=10% Similarity=-0.027 Sum_probs=109.9
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh--------hcCCceEEEEeChhhHHHHHHHhhCcc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD--------VVKDQAFFICNSIGGLVGLQAAVMEPE 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 76 (260)
.||.|+++|+||++.+..+ ..+++..+.+..+.+. ++.++++|+|||+||.+++.+|.++|+
T Consensus 115 ~g~~vv~~d~rg~~~~~~~----------~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~ 184 (338)
T 2o7r_A 115 AGVVIASVDYRLAPEHRLP----------AAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAA 184 (338)
T ss_dssp HTCEEEEEECCCTTTTCTT----------HHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHT
T ss_pred CCcEEEEecCCCCCCCCCc----------hHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhcc
Confidence 5899999999998765332 2344444444444332 334689999999999999999999988
Q ss_pred --------chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHH
Q 024971 77 --------ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEEL 148 (260)
Q Consensus 77 --------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (260)
+|+++|+++|...... . ..... ....... .....................
T Consensus 185 ~~~~~~~~~v~~~vl~~p~~~~~~--------~-~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~--- 242 (338)
T 2o7r_A 185 VADELLPLKIKGLVLDEPGFGGSK--------R-TGSEL-RLANDSR---------LPTFVLDLIWELSLPMGADRD--- 242 (338)
T ss_dssp THHHHTTCCEEEEEEESCCCCCSS--------C-CHHHH-HTTTCSS---------SCHHHHHHHHHHHSCTTCCTT---
T ss_pred ccccCCCCceeEEEEECCccCCCc--------C-Chhhh-ccCCCcc---------cCHHHHHHHHHHhCCCCCCCC---
Confidence 8999999998653210 0 00000 0000000 000000111111000000000
Q ss_pred HHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH--HHHHhhccCCCccEEEeCCCCCCc
Q 024971 149 VEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCP 226 (260)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~ 226 (260)
........ ... .....+.+..+.+|+|+++|++|.+++.. ..+.+.+..+++++++++++||.+
T Consensus 243 -----~~~~~~~~--~~~-------~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~gH~~ 308 (338)
T 2o7r_A 243 -----HEYCNPTA--ESE-------PLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERLEKKGVDVVAQFDVGGYHAV 308 (338)
T ss_dssp -----STTTCCC-------------CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHHHHHTTCEEEEEEESSCCTTG
T ss_pred -----CcccCCCC--CCc-------ccccHhhhcCCCCCEEEEECCCCcchHHHHHHHHHHHHCCCcEEEEEECCCceEE
Confidence 00000000 000 00001123345679999999999988743 344565556678999999999988
Q ss_pred chhch---hHHHHHHHHhhhhc
Q 024971 227 QVSLY---LSLSSACLHTLSYL 245 (260)
Q Consensus 227 ~~~~p---~~~~~~i~~~l~~~ 245 (260)
+.++| +++.+.|.+|++..
T Consensus 309 ~~~~~~~~~~~~~~i~~Fl~~~ 330 (338)
T 2o7r_A 309 KLEDPEKAKQFFVILKKFVVDS 330 (338)
T ss_dssp GGTCHHHHHHHHHHHHHHHC--
T ss_pred eccChHHHHHHHHHHHHHHHhh
Confidence 87666 78888888888643
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=134.32 Aligned_cols=191 Identities=13% Similarity=0.024 Sum_probs=114.8
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCcc----chh
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPE----ICR 79 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~----~v~ 79 (260)
||.|+++|+||+|.+..+. ...+....++++.+.++.++. ++++++|||+||.+++.++.++|+ +++
T Consensus 104 g~~v~~~d~rg~g~~~~~~-------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 176 (311)
T 2c7b_A 104 DSVVVSVDYRLAPEYKFPT-------AVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVK 176 (311)
T ss_dssp TCEEEEECCCCTTTSCTTH-------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCCCCCCCCCc-------cHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCce
Confidence 8999999999999986543 234555556666666666666 589999999999999999998887 499
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|+++|....... ............. .. ........+ ...+.......
T Consensus 177 ~~vl~~p~~~~~~~------~~~~~~~~~~~~~-~~---------~~~~~~~~~---------------~~~~~~~~~~~ 225 (311)
T 2c7b_A 177 KQVLIYPVVNMTGV------PTASLVEFGVAET-TS---------LPIELMVWF---------------GRQYLKRPEEA 225 (311)
T ss_dssp EEEEESCCCCCSSC------CCHHHHHHHHCTT-CS---------SCHHHHHHH---------------HHHHCSSTTGG
T ss_pred eEEEECCccCCccc------cccCCccHHHhcc-CC---------CCHHHHHHH---------------HHHhCCCCccc
Confidence 99999987532100 0000000000000 00 000000000 01111000000
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH--HHHhhccCCCccEEEeCCCCCCcc-----hhchh
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL--GRAYGNFDSVEDFIVLPNVGHCPQ-----VSLYL 232 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~~~gH~~~-----~~~p~ 232 (260)
. .. ........+..+. |+++++|++|.+++... .+.+.+...++++++++|++|... .+.++
T Consensus 226 ~---------~~-~~~p~~~~l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~ 294 (311)
T 2c7b_A 226 Y---------DF-KASPLLADLGGLP-PALVVTAEYDPLRDEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGR 294 (311)
T ss_dssp G---------ST-TTCGGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHH
T ss_pred c---------Cc-ccCcccccccCCC-cceEEEcCCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHH
Confidence 0 00 0000012344444 99999999999986542 244555567789999999999765 46678
Q ss_pred HHHHHHHHhhhhc
Q 024971 233 SLSSACLHTLSYL 245 (260)
Q Consensus 233 ~~~~~i~~~l~~~ 245 (260)
++.+.+.+|++..
T Consensus 295 ~~~~~i~~fl~~~ 307 (311)
T 2c7b_A 295 EALDLAAASIRSG 307 (311)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8999999998654
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-20 Score=154.13 Aligned_cols=181 Identities=10% Similarity=-0.032 Sum_probs=117.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCC-CCCCCCccHHHHHHHHHHHHHh--hcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
++||.|+++|+||+|.|....... ........++++.+.+..+.+. ++.++++++||||||.+++.++.++|+++++
T Consensus 550 ~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~ 629 (741)
T 2ecf_A 550 QQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYAC 629 (741)
T ss_dssp HTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSE
T ss_pred hCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEE
Confidence 469999999999999976432100 0000112244444444444333 2346899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|+++|...... ... .+. ..++ .... ...
T Consensus 630 ~v~~~~~~~~~~----------~~~-------------~~~---------~~~~----~~~~-~~~-------------- 658 (741)
T 2ecf_A 630 GVAGAPVTDWGL----------YDS-------------HYT---------ERYM----DLPA-RND-------------- 658 (741)
T ss_dssp EEEESCCCCGGG----------SBH-------------HHH---------HHHH----CCTG-GGH--------------
T ss_pred EEEcCCCcchhh----------hcc-------------ccc---------hhhc----CCcc-cCh--------------
Confidence 999998643210 000 000 0000 0000 000
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC----CCccEEEeCCCCCCcchhchhHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----SVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
..+.. ......+.++++|+|+++|++|..++.+..+.+.+.+ ...++++++++||..+.+.++++.+
T Consensus 659 --~~~~~-------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 729 (741)
T 2ecf_A 659 --AGYRE-------ARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYR 729 (741)
T ss_dssp --HHHHH-------HCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHH
T ss_pred --hhhhh-------cCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHH
Confidence 00000 0113446678899999999999999988877766553 3358999999999999888889999
Q ss_pred HHHHhhhh
Q 024971 237 ACLHTLSY 244 (260)
Q Consensus 237 ~i~~~l~~ 244 (260)
.+.+|++.
T Consensus 730 ~i~~fl~~ 737 (741)
T 2ecf_A 730 VAEAFLGR 737 (741)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.7e-20 Score=127.15 Aligned_cols=146 Identities=18% Similarity=0.028 Sum_probs=102.7
Q ss_pred CCCccEEEEEc-------------CCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh----hcC--CceEEEEeChh
Q 024971 3 LAKSHRVYSID-------------LIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VVK--DQAFFICNSIG 63 (260)
Q Consensus 3 L~~~~~v~~~D-------------~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~lvGhS~G 63 (260)
|++++.|+++| ++|+|.+..... ...++.+.++++.++++. .+. ++++++|||||
T Consensus 39 l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~G 112 (209)
T 3og9_A 39 IAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENF------DLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNG 112 (209)
T ss_dssp HSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGB------CHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHH
T ss_pred cCCCceEEEecCCcCCCCcccceecccccccccCCC------CHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHH
Confidence 56889999999 777776544321 223455555555555543 454 78999999999
Q ss_pred hHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCc
Q 024971 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ 143 (260)
Q Consensus 64 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (260)
|.+++.+|.++|++++++|++++.....
T Consensus 113 g~~a~~~a~~~~~~~~~~v~~~~~~~~~---------------------------------------------------- 140 (209)
T 3og9_A 113 ANVALNMFLRGKINFDKIIAFHGMQLED---------------------------------------------------- 140 (209)
T ss_dssp HHHHHHHHHTTSCCCSEEEEESCCCCCC----------------------------------------------------
T ss_pred HHHHHHHHHhCCcccceEEEECCCCCCc----------------------------------------------------
Confidence 9999999999999999999999853100
Q ss_pred ccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC----CCccEEEe
Q 024971 144 VTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----SVEDFIVL 219 (260)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~ 219 (260)
........++|+++++|++|.++|.+..+.+.+.+ ...+++++
T Consensus 141 ---------------------------------~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 187 (209)
T 3og9_A 141 ---------------------------------FEQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYES 187 (209)
T ss_dssp ---------------------------------CCCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ---------------------------------ccccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEc
Confidence 00112345799999999999999988776655442 34677788
Q ss_pred CCCCCCcchhchhHHHHHHHHhhhh
Q 024971 220 PNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 220 ~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
+ +||.+..+. .+.+.+||+.
T Consensus 188 ~-~gH~~~~~~----~~~~~~~l~~ 207 (209)
T 3og9_A 188 S-LGHQLTQEE----VLAAKKWLTE 207 (209)
T ss_dssp S-STTSCCHHH----HHHHHHHHHH
T ss_pred C-CCCcCCHHH----HHHHHHHHHh
Confidence 8 799885443 4555566654
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-18 Score=142.61 Aligned_cols=210 Identities=11% Similarity=-0.043 Sum_probs=120.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--------------------CceEEEEeChh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--------------------DQAFFICNSIG 63 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~lvGhS~G 63 (260)
++||.|+++|.||+|.|++.. ..++. +.++|+.++++.+.. .++.++|||||
T Consensus 279 ~~GYaVv~~D~RG~G~S~G~~-------~~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyG 350 (763)
T 1lns_A 279 TRGFASIYVAGVGTRSSDGFQ-------TSGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYL 350 (763)
T ss_dssp TTTCEEEEECCTTSTTSCSCC-------CTTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHH
T ss_pred HCCCEEEEECCCcCCCCCCcC-------CCCCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHH
Confidence 679999999999999998754 22333 567888888887752 37999999999
Q ss_pred hHHHHHHHhhCccchhhceEeccCccccc---cCC---C-CCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHh
Q 024971 64 GLVGLQAAVMEPEICRGMILLNISLRMLH---IKK---Q-PWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ 136 (260)
Q Consensus 64 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~---~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (260)
|.+++.+|.++|+.++++|..++...... ... . ..........+........ .......... .
T Consensus 351 G~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~---------~~~g~~~~~~-~ 420 (763)
T 1lns_A 351 GTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRN---------LDGADFLKGN-A 420 (763)
T ss_dssp HHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGG---------GSHHHHHHHH-H
T ss_pred HHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhh---------cCcchhhhHH-H
Confidence 99999999999999999999988753211 000 0 0000000000000000000 0000000000 0
Q ss_pred ccCCCCcccHHHHHHHhc-cCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC--
Q 024971 137 CYNDTSQVTEELVEKILQ-PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-- 213 (260)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-- 213 (260)
........+.. ..........++. .......+.+|++|+|+++|..|..+++.....+.+.+++
T Consensus 421 -------~~~~~~~~~~~~~~~~~~~~~~~w~------~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~ 487 (763)
T 1lns_A 421 -------EYEKRLAEMTAALDRKSGDYNQFWH------DRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGH 487 (763)
T ss_dssp -------HHHHHHHHHHHHHCTTTCCCCHHHH------TTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTC
T ss_pred -------HHHHHHHHHHhhhhhccCchhHHhh------ccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCC
Confidence 00000000000 0000000001110 1122456788999999999999999998888777776653
Q ss_pred ccEEEeCCCCCCcchh-chhHHHHHHHHhhhh
Q 024971 214 EDFIVLPNVGHCPQVS-LYLSLSSACLHTLSY 244 (260)
Q Consensus 214 ~~~~~~~~~gH~~~~~-~p~~~~~~i~~~l~~ 244 (260)
....++.++||..+.+ .+.++.+.+.+|++.
T Consensus 488 ~~~l~i~~~gH~~~~~~~~~~~~~~i~~Ffd~ 519 (763)
T 1lns_A 488 AKHAFLHRGAHIYMNSWQSIDFSETINAYFVA 519 (763)
T ss_dssp CEEEEEESCSSCCCTTBSSCCHHHHHHHHHHH
T ss_pred CeEEEEeCCcccCccccchHHHHHHHHHHHHH
Confidence 2334556789987655 556677788888753
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=129.95 Aligned_cols=141 Identities=10% Similarity=-0.096 Sum_probs=105.4
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH--------hhcCCceEEEEeChhhHHHHHHHhhCcc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK--------DVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 76 (260)
+||.|+++|+||. . ...++....+.+.+... .++.++++++||||||.+++.++ .++
T Consensus 75 ~G~~v~~~d~~~s---~----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~ 139 (258)
T 2fx5_A 75 HGFVVAAAETSNA---G----------TGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDT 139 (258)
T ss_dssp HTCEEEEECCSCC---T----------TSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TST
T ss_pred CCeEEEEecCCCC---c----------cHHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCc
Confidence 5899999999963 1 12234444444444433 44567899999999999999988 456
Q ss_pred chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 77 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
++++++++++.... .
T Consensus 140 ~v~~~v~~~~~~~~-----------------------------------------------~------------------ 154 (258)
T 2fx5_A 140 RVRTTAPIQPYTLG-----------------------------------------------L------------------ 154 (258)
T ss_dssp TCCEEEEEEECCSS-----------------------------------------------T------------------
T ss_pred CeEEEEEecCcccc-----------------------------------------------c------------------
Confidence 79999998874210 0
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH-HHHhhccC-CCccEEEeCCCCCCcchhchhHH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFD-SVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
......+.++++|+|+++|++|.+++.+. .+.+.+.. +++++++++++||+.+.++++++
T Consensus 155 ------------------~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~ 216 (258)
T 2fx5_A 155 ------------------GHDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAY 216 (258)
T ss_dssp ------------------TCCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGG
T ss_pred ------------------ccchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccchHHHH
Confidence 00022456788999999999999999886 66655543 45889999999999999999999
Q ss_pred HHHHHHhhh
Q 024971 235 SSACLHTLS 243 (260)
Q Consensus 235 ~~~i~~~l~ 243 (260)
.+.+.+|++
T Consensus 217 ~~~i~~fl~ 225 (258)
T 2fx5_A 217 RGPSTAWFR 225 (258)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999997
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-18 Score=128.44 Aligned_cols=185 Identities=14% Similarity=0.004 Sum_probs=108.3
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH---hh-cCCceEEEEeChhhHHHHHHHhhCccch---
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DV-VKDQAFFICNSIGGLVGLQAAVMEPEIC--- 78 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v--- 78 (260)
||.|+++|+||+|.+..+. ..++..+.+..+.+ .+ +.++++++|||+||.+|+.+|.++|+++
T Consensus 121 g~~Vv~~Dyrg~~~~~~p~----------~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~ 190 (323)
T 3ain_A 121 QCVTISVDYRLAPENKFPA----------AVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKL 190 (323)
T ss_dssp TSEEEEECCCCTTTSCTTH----------HHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEecCCCCCCCCCcc----------hHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCc
Confidence 8999999999999875432 34444444433333 33 4668999999999999999999998877
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++|+++|...... . ............ ........+........... .....
T Consensus 191 ~~~vl~~p~~~~~~--------~--~~~~~~~~~~~~---------l~~~~~~~~~~~~~~~~~~~--------~~~~~- 242 (323)
T 3ain_A 191 KYQVLIYPAVSFDL--------I--TKSLYDNGEGFF---------LTREHIDWFGQQYLRSFADL--------LDFRF- 242 (323)
T ss_dssp SEEEEESCCCSCCS--------C--CHHHHHHSSSSS---------SCHHHHHHHHHHHCSSGGGG--------GCTTT-
T ss_pred eeEEEEeccccCCC--------C--CccHHHhccCCC---------CCHHHHHHHHHHhCCCCccc--------CCccc-
Confidence 88999998743210 0 000000000000 00111111111111000000 00000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCC--hHHHHHhhccCCCccEEEeCCCCCCcch-----hch
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP--IELGRAYGNFDSVEDFIVLPNVGHCPQV-----SLY 231 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~p 231 (260)
... ...+..+ .|+++++|++|.+++ ....+.+.+...+++++++++++|.... +.+
T Consensus 243 ---------------sp~-~~~l~~l-~P~lii~G~~D~l~~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~ 305 (323)
T 3ain_A 243 ---------------SPI-LADLNDL-PPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQG 305 (323)
T ss_dssp ---------------CGG-GSCCTTC-CCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHH
T ss_pred ---------------Ccc-cCcccCC-CHHHEEECCCCccHHHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHH
Confidence 000 1123333 399999999999875 2233445555567899999999998765 556
Q ss_pred hHHHHHHHHhhhhc
Q 024971 232 LSLSSACLHTLSYL 245 (260)
Q Consensus 232 ~~~~~~i~~~l~~~ 245 (260)
+++.+.+.+||+..
T Consensus 306 ~~~~~~i~~fl~~~ 319 (323)
T 3ain_A 306 RDAIGLIGYVLRKV 319 (323)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88899999998653
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.8e-19 Score=146.00 Aligned_cols=183 Identities=10% Similarity=0.035 Sum_probs=116.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCC-CCCCCCccHHHHHHHHHHHHHh--hcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.+||.|+++|+||+|.+....... ........++++.+.+..+.+. ++.++++++||||||.+++.++.++|+++++
T Consensus 526 ~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~ 605 (719)
T 1z68_A 526 KEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKC 605 (719)
T ss_dssp TTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSE
T ss_pred cCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEE
Confidence 479999999999999986431000 0000112334444444444332 1235899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|+++|...... . .. .+. ...+ ..... ..
T Consensus 606 ~v~~~~~~~~~~------~----~~-------------~~~---------~~~~----g~~~~---------------~~ 634 (719)
T 1z68_A 606 GIAVAPVSSWEY------Y----AS-------------VYT---------ERFM----GLPTK---------------DD 634 (719)
T ss_dssp EEEESCCCCTTT------S----BH-------------HHH---------HHHH----CCSST---------------TT
T ss_pred EEEcCCccChHH------h----cc-------------ccc---------hhhc----CCccc---------------cc
Confidence 999998742210 0 00 000 0000 00000 00
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCC-CEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCcchhchhHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKC-PVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
....+.. ......+.++++ |+|+++|++|..++.+..+.+.+. ....++++++++||....++++++.
T Consensus 635 ~~~~~~~-------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 707 (719)
T 1z68_A 635 NLEHYKN-------STVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLY 707 (719)
T ss_dssp THHHHHH-------TCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHH
T ss_pred chhhhhh-------CCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHH
Confidence 0000000 011244567777 899999999999998877776554 2346799999999998777899999
Q ss_pred HHHHHhhhh
Q 024971 236 SACLHTLSY 244 (260)
Q Consensus 236 ~~i~~~l~~ 244 (260)
+.+.+|++.
T Consensus 708 ~~i~~fl~~ 716 (719)
T 1z68_A 708 THMTHFLKQ 716 (719)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999864
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-19 Score=127.11 Aligned_cols=157 Identities=14% Similarity=0.123 Sum_probs=105.6
Q ss_pred CccEEEEEcCCCCCCCCCC--------C---CCCCCCCCCccHHHHHHHHHHHHHhh-----cCCceEEEEeChhhHHHH
Q 024971 5 KSHRVYSIDLIGYGYSDKP--------N---PRDFFDKPFYTFETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGL 68 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~--------~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~lvGhS~Gg~~a~ 68 (260)
.+++|+++|.|+++.+... . ..........++++.++++..++++. +.++++|+||||||.+++
T Consensus 54 ~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 133 (239)
T 3u0v_A 54 QHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAM 133 (239)
T ss_dssp SSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHH
T ss_pred CceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHH
Confidence 4799999998754211100 0 00000023457888888999888873 557899999999999999
Q ss_pred HHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHH
Q 024971 69 QAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEEL 148 (260)
Q Consensus 69 ~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (260)
.++.++|++++++|++++...... .. ..
T Consensus 134 ~~a~~~~~~~~~~v~~~~~~~~~~-------------~~----------------------~~----------------- 161 (239)
T 3u0v_A 134 HLAYRNHQDVAGVFALSSFLNKAS-------------AV----------------------YQ----------------- 161 (239)
T ss_dssp HHHHHHCTTSSEEEEESCCCCTTC-------------HH----------------------HH-----------------
T ss_pred HHHHhCccccceEEEecCCCCchh-------------HH----------------------HH-----------------
Confidence 999999999999999998642100 00 00
Q ss_pred HHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCC-EEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCC
Q 024971 149 VEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCP-VLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVG 223 (260)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~g 223 (260)
.. ......+| +++++|++|.+++.+..+.+.+. ..++++++++++|
T Consensus 162 --~~---------------------------~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~ 212 (239)
T 3u0v_A 162 --AL---------------------------QKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVY 212 (239)
T ss_dssp --HH---------------------------HHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCC
T ss_pred --HH---------------------------HhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCC
Confidence 00 01123466 99999999999998766665544 3468899999999
Q ss_pred CCcchhchhHHHHHHHHhh
Q 024971 224 HCPQVSLYLSLSSACLHTL 242 (260)
Q Consensus 224 H~~~~~~p~~~~~~i~~~l 242 (260)
|....+..+.+.+.|.+++
T Consensus 213 H~~~~~~~~~~~~~l~~~l 231 (239)
T 3u0v_A 213 HELSKTELDILKLWILTKL 231 (239)
T ss_dssp SSCCHHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHHHHhC
Confidence 9988555444444444433
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=127.35 Aligned_cols=149 Identities=15% Similarity=-0.044 Sum_probs=103.0
Q ss_pred CCCccEEEEEcCCCCCC---CCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cC--CceEEEEeChhhHHHHHHHhh
Q 024971 3 LAKSHRVYSIDLIGYGY---SDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VK--DQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~---S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
|+++|.|+++|.|++.. +-..... .......++.+.++++.++++.+ +. ++++++|||+||.+++.++.+
T Consensus 53 l~~~~~vv~~d~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 131 (223)
T 3b5e_A 53 IAPTATLVAARGRIPQEDGFRWFERID-PTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLL 131 (223)
T ss_dssp HCTTSEEEEECCSEEETTEEESSCEEE-TTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHH
T ss_pred cCCCceEEEeCCCCCcCCccccccccC-CCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHh
Confidence 56799999999887421 1100000 00001234566667777766654 33 689999999999999999999
Q ss_pred CccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHh
Q 024971 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (260)
Q Consensus 74 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (260)
+|++++++|++++..... .
T Consensus 132 ~~~~~~~~v~~~~~~~~~-------------------------------------------------~------------ 150 (223)
T 3b5e_A 132 HPGIVRLAALLRPMPVLD-------------------------------------------------H------------ 150 (223)
T ss_dssp STTSCSEEEEESCCCCCS-------------------------------------------------S------------
T ss_pred CccccceEEEecCccCcc-------------------------------------------------c------------
Confidence 999999999999863110 0
Q ss_pred ccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC----CccEEEeCCCCCCcchh
Q 024971 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS----VEDFIVLPNVGHCPQVS 229 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~ 229 (260)
......+++|+++++|++|.++|.+..+ +.+.++ ++++++++ +||.+..+
T Consensus 151 ------------------------~~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~ 204 (223)
T 3b5e_A 151 ------------------------VPATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDP 204 (223)
T ss_dssp ------------------------CCCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHH
T ss_pred ------------------------cccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHH
Confidence 0011235799999999999999988777 665543 57899999 99998765
Q ss_pred chhHHHHHHHHhhh
Q 024971 230 LYLSLSSACLHTLS 243 (260)
Q Consensus 230 ~p~~~~~~i~~~l~ 243 (260)
..+ .+.+|++
T Consensus 205 ~~~----~i~~~l~ 214 (223)
T 3b5e_A 205 DAA----IVRQWLA 214 (223)
T ss_dssp HHH----HHHHHHH
T ss_pred HHH----HHHHHHH
Confidence 543 5556664
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-19 Score=146.62 Aligned_cols=180 Identities=11% Similarity=0.006 Sum_probs=115.9
Q ss_pred CccEEEEEcCCCCCCCCCCCC-CCCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhC----ccc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNP-RDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVME----PEI 77 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~----p~~ 77 (260)
+||.|+++|+||+|.+..... ..........++++.+.+..+.+.. +.++++++||||||.+++.++.++ |++
T Consensus 527 ~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~ 606 (723)
T 1xfd_A 527 HGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQT 606 (723)
T ss_dssp TCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCC
T ss_pred CCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCe
Confidence 699999999999998521100 0000012234555555555544431 346899999999999999999999 999
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
++++|++++...... . . ..+ ....+ ........ ..
T Consensus 607 ~~~~v~~~~~~~~~~------~----~-------------~~~---------~~~~~----~~~~~~~~---------~~ 641 (723)
T 1xfd_A 607 FTCGSALSPITDFKL------Y----A-------------SAF---------SERYL----GLHGLDNR---------AY 641 (723)
T ss_dssp CSEEEEESCCCCTTS------S----B-------------HHH---------HHHHH----CCCSSCCS---------ST
T ss_pred EEEEEEccCCcchHH------h----h-------------hhc---------cHhhc----CCccCChh---------HH
Confidence 999999998643210 0 0 000 00000 00000000 00
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCC-CCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCc-chhch
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVK-CPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCP-QVSLY 231 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~-~~~~p 231 (260)
........+.+++ +|+|+++|++|..+|.+..+.+.+. .+++++++++++||.+ ..+.+
T Consensus 642 ---------------~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 706 (723)
T 1xfd_A 642 ---------------EMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLK 706 (723)
T ss_dssp ---------------TTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHH
T ss_pred ---------------HhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcch
Confidence 0001113355677 8999999999999998877765544 3567999999999987 67889
Q ss_pred hHHHHHHHHhhhh
Q 024971 232 LSLSSACLHTLSY 244 (260)
Q Consensus 232 ~~~~~~i~~~l~~ 244 (260)
+++.+.+.+|++.
T Consensus 707 ~~~~~~i~~fl~~ 719 (723)
T 1xfd_A 707 QHLYRSIINFFVE 719 (723)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999964
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=133.62 Aligned_cols=188 Identities=14% Similarity=0.099 Sum_probs=114.2
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhhCccc----h
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEI----C 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~----v 78 (260)
.||.|+++|+||+|.|..+. ...+..+.++++.+.++.++.+ +++++|||+||.+++.++.++|++ +
T Consensus 109 ~g~~Vv~~dyrg~g~~~~p~-------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~ 181 (311)
T 1jji_A 109 SNSTVVSVDYRLAPEHKFPA-------AVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFI 181 (311)
T ss_dssp HTSEEEEEECCCTTTSCTTH-------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCE
T ss_pred hCCEEEEecCCCCCCCCCCC-------cHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCc
Confidence 58999999999999987644 3345666667777777777665 899999999999999999988876 9
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++|+++|...... . ............ .........+.......... ......
T Consensus 182 ~~~vl~~p~~~~~~-------~---~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~--------~~~~~~- 234 (311)
T 1jji_A 182 KHQILIYPVVNFVA-------P---TPSLLEFGEGLW--------ILDQKIMSWFSEQYFSREED--------KFNPLA- 234 (311)
T ss_dssp EEEEEESCCCCSSS-------C---CHHHHHTSSSCS--------SCCHHHHHHHHHHHCSSGGG--------GGCTTT-
T ss_pred eEEEEeCCccCCCC-------C---CccHHHhcCCCc--------cCCHHHHHHHHHHhCCCCcc--------CCCccc-
Confidence 99999998753210 0 000000000000 00001111111111100000 000000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH--HHHHhhccCCCccEEEeCCCCCCcch-----hch
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQV-----SLY 231 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~p 231 (260)
... ...++.+ .|+++++|++|.+++.. ..+.+.+..+++++++++|++|.+.. +..
T Consensus 235 ---------------~p~-~~~l~~~-~P~li~~G~~D~l~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~ 297 (311)
T 1jji_A 235 ---------------SVI-FADLENL-PPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAA 297 (311)
T ss_dssp ---------------SGG-GSCCTTC-CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHH
T ss_pred ---------------Ccc-cccccCC-ChheEEEcCcCcchHHHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHH
Confidence 000 1123333 59999999999988533 33556666677999999999997664 345
Q ss_pred hHHHHHHHHhhh
Q 024971 232 LSLSSACLHTLS 243 (260)
Q Consensus 232 ~~~~~~i~~~l~ 243 (260)
+++.+.+.+||+
T Consensus 298 ~~~~~~i~~fl~ 309 (311)
T 1jji_A 298 RDAINQIAALLV 309 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 777778888875
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-18 Score=142.15 Aligned_cols=187 Identities=15% Similarity=0.133 Sum_probs=122.1
Q ss_pred CCccEEEEEcCCC---CCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh--hcCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIG---YGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G---~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
++||.|+++|+|| ||.+....... .....+++++.+.+..++++ ++.++++++||||||.+++.++.. |+++
T Consensus 451 ~~G~~v~~~d~rG~~~~G~~~~~~~~~--~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~ 527 (662)
T 3azo_A 451 SRGIGVADVNYGGSTGYGRAYRERLRG--RWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVY 527 (662)
T ss_dssp TTTCEEEEEECTTCSSSCHHHHHTTTT--TTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCC
T ss_pred hCCCEEEEECCCCCCCccHHHHHhhcc--ccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCce
Confidence 4689999999999 77664321100 01235678888888888887 456799999999999999998886 8999
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++|+++|......... ... ..... . +....+.... ..
T Consensus 528 ~~~v~~~~~~~~~~~~~-------------~~~--~~~~~---------~----~~~~~~~~~~-~~------------- 565 (662)
T 3azo_A 528 ACGTVLYPVLDLLGWAD-------------GGT--HDFES---------R----YLDFLIGSFE-EF------------- 565 (662)
T ss_dssp SEEEEESCCCCHHHHHT-------------TCS--CGGGT---------T----HHHHHTCCTT-TC-------------
T ss_pred EEEEecCCccCHHHHhc-------------ccc--cchhh---------H----hHHHHhCCCc-cc-------------
Confidence 99999988643211000 000 00000 0 0000011100 00
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC----ccEEEeCCCCCCc-chhchhH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV----EDFIVLPNVGHCP-QVSLYLS 233 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~-~~~~p~~ 233 (260)
...+.. ..+...+.++++|+|+++|++|..+|++..+.+.+.++. .++++++++||.+ ..+++.+
T Consensus 566 ---~~~~~~-------~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~ 635 (662)
T 3azo_A 566 ---PERYRD-------RAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVR 635 (662)
T ss_dssp ---HHHHHH-------TCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHH
T ss_pred ---hhHHHh-------hChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHH
Confidence 011100 011345667889999999999999999888777666443 4899999999976 4567889
Q ss_pred HHHHHHHhhhhc
Q 024971 234 LSSACLHTLSYL 245 (260)
Q Consensus 234 ~~~~i~~~l~~~ 245 (260)
+.+.+.+|++..
T Consensus 636 ~~~~~~~fl~~~ 647 (662)
T 3azo_A 636 ALEAELSLYAQV 647 (662)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999654
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-18 Score=123.44 Aligned_cols=170 Identities=16% Similarity=0.080 Sum_probs=112.7
Q ss_pred cEEEEEcCCCCCCCC--CCCC-C--C------CCCC-CCc-cHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHH
Q 024971 7 HRVYSIDLIGYGYSD--KPNP-R--D------FFDK-PFY-TFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQ 69 (260)
Q Consensus 7 ~~v~~~D~~G~G~S~--~~~~-~--~------~~~~-~~~-~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~ 69 (260)
++|+.+|.+++|.+. +... . . +... ..+ +++++++++.++++.+ +.++++++||||||.+++.
T Consensus 35 ~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~ 114 (250)
T 3lp5_A 35 HSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTL 114 (250)
T ss_dssp CCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHH
T ss_pred ceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHH
Confidence 789998888888631 1110 0 0 0000 122 6788899998888887 7789999999999999999
Q ss_pred HHhhC-----ccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcc
Q 024971 70 AAVME-----PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV 144 (260)
Q Consensus 70 ~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (260)
++.++ |++|+++|+++++........ ...
T Consensus 115 ~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~----------------------------------------------~~~ 148 (250)
T 3lp5_A 115 FLERYLKESPKVHIDRLMTIASPYNMESTST----------------------------------------------TAK 148 (250)
T ss_dssp HHHHTGGGSTTCEEEEEEEESCCTTTTCCCS----------------------------------------------SCC
T ss_pred HHHHccccccchhhCEEEEECCCCCcccccc----------------------------------------------ccc
Confidence 99887 568999999998754321000 000
Q ss_pred cHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecC----CCCCCChHHHHHhhccCCC--c--cE
Q 024971 145 TEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGD----KDPWEPIELGRAYGNFDSV--E--DF 216 (260)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~----~D~~~~~~~~~~~~~~~~~--~--~~ 216 (260)
. . .+..+... ...+.+ ++|+++|+|+ .|.++|.+.++.+...+++ . +.
T Consensus 149 ~-~----------------~~~~l~~~------~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~ 204 (250)
T 3lp5_A 149 T-S----------------MFKELYRY------RTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTE 204 (250)
T ss_dssp C-H----------------HHHHHHHT------GGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEE
T ss_pred C-H----------------HHHHHHhc------cccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEE
Confidence 0 0 00000000 223333 7999999999 8999999888775554432 1 22
Q ss_pred EEe--CCCCCCcchhchhHHHHHHHHhhhhccc
Q 024971 217 IVL--PNVGHCPQVSLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 217 ~~~--~~~gH~~~~~~p~~~~~~i~~~l~~~~~ 247 (260)
..+ ++++|..+.++| ++.+.|.+||.....
T Consensus 205 ~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~~~~ 236 (250)
T 3lp5_A 205 ITVTGANTAHSDLPQNK-QIVSLIRQYLLAETM 236 (250)
T ss_dssp EECTTTTBSSCCHHHHH-HHHHHHHHHTSCCCC
T ss_pred EEEeCCCCchhcchhCH-HHHHHHHHHHhcccc
Confidence 334 357899999998 899999999965543
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=129.43 Aligned_cols=192 Identities=11% Similarity=0.021 Sum_probs=108.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCccc----h
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEI----C 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~----v 78 (260)
.||.|+++|+||+|.+..+. ...+..+.++.+.+.++.++. ++++++|||+||.+++.++.+++++ +
T Consensus 109 ~G~~Vv~~d~rg~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~ 181 (323)
T 1lzl_A 109 LGFAVANVEYRLAPETTFPG-------PVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPV 181 (323)
T ss_dssp HCCEEEEECCCCTTTSCTTH-------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCC
T ss_pred cCcEEEEecCCCCCCCCCCc-------hHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCe
Confidence 38999999999999886543 222344444444444445554 5899999999999999999988764 9
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++++++|...... . ............ ........ ....+......
T Consensus 182 ~~~vl~~p~~~~~~--------~--~~~~~~~~~~~~---------~~~~~~~~---------------~~~~~~~~~~~ 227 (323)
T 1lzl_A 182 AFQFLEIPELDDRL--------E--TVSMTNFVDTPL---------WHRPNAIL---------------SWKYYLGESYS 227 (323)
T ss_dssp CEEEEESCCCCTTC--------C--SHHHHHCSSCSS---------CCHHHHHH---------------HHHHHHCTTCC
T ss_pred eEEEEECCccCCCc--------C--chhHHHhccCCC---------CCHHHHHH---------------HHHHhCCCCcc
Confidence 99999998753210 0 000000000000 00000000 01111110000
Q ss_pred c---chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCC--hHHHHHhhccCCCccEEEeCCCCCCcch----h
Q 024971 159 T---GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP--IELGRAYGNFDSVEDFIVLPNVGHCPQV----S 229 (260)
Q Consensus 159 ~---~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~ 229 (260)
. .....+ ........+.. .+|+++++|++|.+++ ....+.+.+...++++++++|++|.... +
T Consensus 228 ~~~~~~~~~~-------~sp~~~~~~~~-~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~ 299 (323)
T 1lzl_A 228 GPEDPDVSIY-------AAPSRATDLTG-LPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAA 299 (323)
T ss_dssp CTTCSCCCTT-------TCGGGCSCCTT-CCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSH
T ss_pred cccccCCCcc-------cCcccCcccCC-CChhheEECCcCCchHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCH
Confidence 0 000000 00000011111 2799999999999874 2233445555567899999999996442 3
Q ss_pred chhHHHHHHHHhhhhc
Q 024971 230 LYLSLSSACLHTLSYL 245 (260)
Q Consensus 230 ~p~~~~~~i~~~l~~~ 245 (260)
.++++.+.+.+|++..
T Consensus 300 ~~~~~~~~i~~fl~~~ 315 (323)
T 1lzl_A 300 VSERGAAEALTAIRRG 315 (323)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4678889999999654
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-20 Score=136.97 Aligned_cols=175 Identities=14% Similarity=0.077 Sum_probs=111.5
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc-------c
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP-------E 76 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p-------~ 76 (260)
++||.|+++|+||+|.+..+. ...++.+.++.+.+..+.++.++++++|||+||.+++.++.+.+ +
T Consensus 110 ~~G~~v~~~d~r~~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~ 182 (303)
T 4e15_A 110 RRGYRVAVMDYNLCPQVTLEQ-------LMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSK 182 (303)
T ss_dssp HTTCEEEEECCCCTTTSCHHH-------HHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHH
T ss_pred hCCCEEEEecCCCCCCCChhH-------HHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccc
Confidence 469999999999998764322 11122222233333334567789999999999999999998643 3
Q ss_pred chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 77 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+++++|++++....... .... .. .....+.... +..
T Consensus 183 ~v~~~v~~~~~~~~~~~--------------~~~~---------------~~----~~~~~~~~~~----~~~------- 218 (303)
T 4e15_A 183 MVWALIFLCGVYDLREL--------------SNLE---------------SV----NPKNILGLNE----RNI------- 218 (303)
T ss_dssp TEEEEEEESCCCCCHHH--------------HTCT---------------TT----SGGGTTCCCT----TTT-------
T ss_pred cccEEEEEeeeeccHhh--------------hccc---------------cc----chhhhhcCCH----HHH-------
Confidence 79999999986432100 0000 00 0000000000 000
Q ss_pred CccchHHHHHHHHhhhCCCCCC-ccCCCC----CCCEEEEecCCCCCCChHHHHHhhccC----CCccEEEeCCCCCCcc
Q 024971 157 LETGAADVFLEFICYSGGPLPE-ELLPQV----KCPVLIAWGDKDPWEPIELGRAYGNFD----SVEDFIVLPNVGHCPQ 227 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i----~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~ 227 (260)
...... ..+..+ ++|+++++|++|..++.+..+.+.+.+ .++++++++++||+.+
T Consensus 219 ----------------~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 282 (303)
T 4e15_A 219 ----------------ESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDI 282 (303)
T ss_dssp ----------------TTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHH
T ss_pred ----------------HHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHH
Confidence 000001 223333 899999999999999988877766553 3578999999999999
Q ss_pred hhchhHHHHHHHHhhhhc
Q 024971 228 VSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 228 ~~~p~~~~~~i~~~l~~~ 245 (260)
.+........+.+++...
T Consensus 283 ~~~~~~~~~~l~~~l~~~ 300 (303)
T 4e15_A 283 IEETAIDDSDVSRFLRNI 300 (303)
T ss_dssp HHGGGSTTSHHHHHHHHH
T ss_pred HHHHhCCCcHHHHHHHHh
Confidence 999998888888887554
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-19 Score=133.75 Aligned_cols=201 Identities=10% Similarity=-0.009 Sum_probs=111.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHH---HHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhh-----Ccc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETW---ASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-----EPE 76 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~-----~p~ 76 (260)
.||.|+++|+||+|.|+...+ ....+.+. ++.+.+.++.++.++++++|||+||.+++.++.. +|+
T Consensus 140 ~g~~vv~~d~r~~gg~~~~~~------~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~ 213 (361)
T 1jkm_A 140 AGSVVVMVDFRNAWTAEGHHP------FPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLD 213 (361)
T ss_dssp TTCEEEEEECCCSEETTEECC------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGG
T ss_pred CCCEEEEEecCCCCCCCCCCC------CCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCc
Confidence 799999999999976643221 22233343 4455555556677799999999999999999988 888
Q ss_pred chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 77 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+++++|+++|...... .+. ......... ... ..............+. ..+....
T Consensus 214 ~i~~~il~~~~~~~~~----~~~----~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~ 267 (361)
T 1jkm_A 214 AIDGVYASIPYISGGY----AWD----HERRLTELP--SLV-ENDGYFIENGGMALLV---------------RAYDPTG 267 (361)
T ss_dssp GCSEEEEESCCCCCCT----TSC----HHHHHHHCT--HHH-HTTTSSSCHHHHHHHH---------------HHHSSSS
T ss_pred CcceEEEECCcccccc----ccc----cccccccCc--chh-hccCcccCHHHHHHHH---------------HHhCCCC
Confidence 9999999998753210 000 000000000 000 0000000000011111 1111000
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCCh--HHHHHhhccCCCccEEEeCCCCCCcc-h-----
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPI--ELGRAYGNFDSVEDFIVLPNVGHCPQ-V----- 228 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~-~----- 228 (260)
..... .. ... .......++.+. |+|+++|++|.+++. ...+.+.+...+++++++++++|..+ .
T Consensus 268 ~~~~~--~~---~~p--~~~~~~~l~~l~-P~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~ 339 (361)
T 1jkm_A 268 EHAED--PI---AWP--YFASEDELRGLP-PFVVAVNELDPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWL 339 (361)
T ss_dssp TTTTC--TT---TCG--GGCCHHHHTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGC
T ss_pred CCCCC--cc---cCc--cccChhhHcCCC-ceEEEEcCcCcchhhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccc
Confidence 00000 00 000 000012345555 999999999998872 12233444455679999999999877 3
Q ss_pred hch-hHHHHHHHHhhhhc
Q 024971 229 SLY-LSLSSACLHTLSYL 245 (260)
Q Consensus 229 ~~p-~~~~~~i~~~l~~~ 245 (260)
+.+ +++.+.+.+|++..
T Consensus 340 ~~~~~~~~~~i~~fl~~~ 357 (361)
T 1jkm_A 340 PAALESTVRDVAGFAADR 357 (361)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHh
Confidence 444 78888999998754
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=142.13 Aligned_cols=184 Identities=12% Similarity=0.013 Sum_probs=116.0
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCC-CCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.+||.|+++|+||+|.+....... ........++++.+.+..+.+.- +.+++.++||||||.+++.++.++|+++++
T Consensus 532 ~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~ 611 (740)
T 4a5s_A 532 TENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKC 611 (740)
T ss_dssp TTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSE
T ss_pred cCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeE
Confidence 379999999999999765421000 00011223445544444444221 236899999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|+++|...... +. ..+. ... .... ....
T Consensus 612 ~v~~~p~~~~~~--------------~~---------~~~~---------~~~----~~~p---------------~~~~ 640 (740)
T 4a5s_A 612 GIAVAPVSRWEY--------------YD---------SVYT---------ERY----MGLP---------------TPED 640 (740)
T ss_dssp EEEESCCCCGGG--------------SB---------HHHH---------HHH----HCCS---------------STTT
T ss_pred EEEcCCccchHH--------------hh---------hHHH---------HHH----cCCC---------------Cccc
Confidence 999998743210 00 0000 000 0000 0000
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCC-CEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCc-chhchhHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKC-PVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCP-QVSLYLSL 234 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~-~~~~p~~~ 234 (260)
....+.. ......+.++++ |+|+++|++|..++.+..+.+.+. ..+.++++++++||.+ ..+.++++
T Consensus 641 ~~~~~~~-------~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~ 713 (740)
T 4a5s_A 641 NLDHYRN-------STVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHI 713 (740)
T ss_dssp THHHHHH-------SCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHH
T ss_pred cHHHHHh-------CCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHH
Confidence 0000000 111334566776 999999999999998877665544 3456899999999987 67789999
Q ss_pred HHHHHHhhhhc
Q 024971 235 SSACLHTLSYL 245 (260)
Q Consensus 235 ~~~i~~~l~~~ 245 (260)
.+.+.+||+..
T Consensus 714 ~~~i~~fl~~~ 724 (740)
T 4a5s_A 714 YTHMSHFIKQC 724 (740)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999654
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-17 Score=123.38 Aligned_cols=185 Identities=15% Similarity=0.083 Sum_probs=109.3
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh-hcCCceEEEEeChhhHHHHHHHhhCccc----hhh
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VVKDQAFFICNSIGGLVGLQAAVMEPEI----CRG 80 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~----v~~ 80 (260)
||.|+++|+|+++.+..+ ..+++..+.+..+++. ++.++++|+|||+||.+|+.+|.++|++ +++
T Consensus 111 g~~v~~~dyr~~~~~~~~----------~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~ 180 (322)
T 3k6k_A 111 SATLWSLDYRLAPENPFP----------AAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAG 180 (322)
T ss_dssp TCEEEEECCCCTTTSCTT----------HHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSE
T ss_pred CCEEEEeeCCCCCCCCCc----------hHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceE
Confidence 899999999998866432 3566666666666665 4557899999999999999999998876 999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|+++|...... . ............ .........+ ...+........
T Consensus 181 ~vl~~p~~~~~~--------~--~~~~~~~~~~~~--------~~~~~~~~~~---------------~~~~~~~~~~~~ 227 (322)
T 3k6k_A 181 LVMLSPFVDLTL--------S--RWSNSNLADRDF--------LAEPDTLGEM---------------SELYVGGEDRKN 227 (322)
T ss_dssp EEEESCCCCTTC--------C--SHHHHHTGGGCS--------SSCHHHHHHH---------------HHHHHTTSCTTC
T ss_pred EEEecCCcCccc--------C--ccchhhccCCCC--------cCCHHHHHHH---------------HHHhcCCCCCCC
Confidence 999998753210 0 000000000000 0000001100 011110000000
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCCh--HHHHHhhccCCCccEEEeCCCCCCcch-----hchhH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPI--ELGRAYGNFDSVEDFIVLPNVGHCPQV-----SLYLS 233 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~p~~ 233 (260)
. . .......+ +...|+|+++|++|.+++. ...+.+.+...++++++++|++|.... +.+++
T Consensus 228 ~----------~-~sp~~~~~-~~~pP~li~~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~ 295 (322)
T 3k6k_A 228 P----------L-ISPVYADL-SGLPEMLIHVGSEEALLSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADI 295 (322)
T ss_dssp T----------T-TCGGGSCC-TTCCCEEEEEESSCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHH
T ss_pred C----------c-CCcccccc-cCCCcEEEEECCcCccHHHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHH
Confidence 0 0 00001111 2236999999999987431 122334445566899999999997653 55788
Q ss_pred HHHHHHHhhhhc
Q 024971 234 LSSACLHTLSYL 245 (260)
Q Consensus 234 ~~~~i~~~l~~~ 245 (260)
+.+.+.+||+..
T Consensus 296 ~~~~i~~fl~~~ 307 (322)
T 3k6k_A 296 SIKEICHWISAR 307 (322)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 899999999654
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=128.51 Aligned_cols=190 Identities=14% Similarity=0.002 Sum_probs=104.3
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc--CCceEEEEeChhhHHHHHHHhhCcc----chh
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPE----ICR 79 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~ 79 (260)
||.|+++|+||+|.+..+. ...+..+.++.+.+..+.++ .++++++|||+||.+++.+|.++|+ +++
T Consensus 105 g~~v~~~d~rg~~~~~~~~-------~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~ 177 (310)
T 2hm7_A 105 RAVVFSVDYRLAPEHKFPA-------AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALA 177 (310)
T ss_dssp TSEEEEECCCCTTTSCTTH-------HHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCEEEEeCCCCCCCCCCCc-------cHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCce
Confidence 7999999999999875432 11122222222222222223 3689999999999999999998887 699
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|+++|....... .. ............ ........+........... ....
T Consensus 178 ~~vl~~p~~~~~~~-----~~---~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~--------~~~~--- 229 (310)
T 2hm7_A 178 FQLLIYPSTGYDPA-----HP---PASIEENAEGYL---------LTGGMMLWFRDQYLNSLEEL--------THPW--- 229 (310)
T ss_dssp CEEEESCCCCCCTT-----SC---CHHHHHTSSSSS---------SCHHHHHHHHHHHCSSGGGG--------GCTT---
T ss_pred EEEEEcCCcCCCcc-----cC---CcchhhcCCCCC---------CCHHHHHHHHHHhCCCCCcc--------CCcc---
Confidence 99999987533100 00 000000000000 00001111111100000000 0000
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCCh--HHHHHhhccCCCccEEEeCCCCCCcc-----hhchh
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPI--ELGRAYGNFDSVEDFIVLPNVGHCPQ-----VSLYL 232 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~-----~~~p~ 232 (260)
........+..+ .|+++++|++|.+++. ...+.+.+...++++++++|+||... .+.++
T Consensus 230 -------------~~p~~~~~l~~~-~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~ 295 (310)
T 2hm7_A 230 -------------FSPVLYPDLSGL-PPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGAT 295 (310)
T ss_dssp -------------TCGGGCSCCTTC-CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHH
T ss_pred -------------CCCCcCccccCC-CCEEEEEecCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHH
Confidence 000001223333 3999999999998721 22333444455689999999999654 35678
Q ss_pred HHHHHHHHhhhh
Q 024971 233 SLSSACLHTLSY 244 (260)
Q Consensus 233 ~~~~~i~~~l~~ 244 (260)
++.+.+.+|++.
T Consensus 296 ~~~~~i~~fl~~ 307 (310)
T 2hm7_A 296 KALVRIAEKLRD 307 (310)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 899999999864
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.8e-18 Score=120.79 Aligned_cols=155 Identities=15% Similarity=-0.029 Sum_probs=103.7
Q ss_pred CccHHHHHHHHH----HHHHhhcCCceEEEEeChhhHHHHHHHhhCcc-----chhhceEeccCccccccCCCCCCCcch
Q 024971 33 FYTFETWASQLN----DFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-----ICRGMILLNISLRMLHIKKQPWYGRPL 103 (260)
Q Consensus 33 ~~~~~~~~~~~~----~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~ 103 (260)
..+++++++++. .+.+.++.++++++||||||.+++.++.++|+ +|+++|+++++......
T Consensus 70 ~~~~~~~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~---------- 139 (254)
T 3ds8_A 70 QATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDP---------- 139 (254)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCH----------
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccc----------
Confidence 468899999984 44455677899999999999999999999998 89999999987533100
Q ss_pred hHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCC
Q 024971 104 IRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQ 183 (260)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (260)
.. .. ...... .. +.....+..+... ...+.+
T Consensus 140 ~~-----------------~~-----------~~~~~~-~~--------------p~~~~~~~~~~~~------~~~~~~ 170 (254)
T 3ds8_A 140 ND-----------------NG-----------MDLSFK-KL--------------PNSTPQMDYFIKN------QTEVSP 170 (254)
T ss_dssp HH-----------------HC-----------SCTTCS-SC--------------SSCCHHHHHHHHT------GGGSCT
T ss_pred cc-----------------cc-----------cccccc-cC--------------CcchHHHHHHHHH------HhhCCC
Confidence 00 00 000000 00 0000111111110 122333
Q ss_pred CCCCEEEEecC------CCCCCChHHHHHhhccCCC----ccEEEeCC--CCCCcchhchhHHHHHHHHhhhhcccc
Q 024971 184 VKCPVLIAWGD------KDPWEPIELGRAYGNFDSV----EDFIVLPN--VGHCPQVSLYLSLSSACLHTLSYLHTC 248 (260)
Q Consensus 184 i~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~----~~~~~~~~--~gH~~~~~~p~~~~~~i~~~l~~~~~~ 248 (260)
++|++.|+|+ .|.++|.+.++.+...+++ .+..++.+ ++|..+.++|+ +.+.|..|++.+...
T Consensus 171 -~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~~~~~ 245 (254)
T 3ds8_A 171 -DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEKFKTD 245 (254)
T ss_dssp -TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHTCCCS
T ss_pred -CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHHhcCC
Confidence 7999999999 9999999999988776654 23445554 78999999885 999999999877644
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.77 E-value=8e-18 Score=122.79 Aligned_cols=70 Identities=14% Similarity=0.121 Sum_probs=59.8
Q ss_pred cEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhC---ccchh---
Q 024971 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVME---PEICR--- 79 (260)
Q Consensus 7 ~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~---p~~v~--- 79 (260)
++|+++|++|. ....+++++++++.+.++.+.. ++++++||||||.+|+.+|.+. |+++.
T Consensus 49 ~~v~~~d~~~~-------------~~~~~~~~~a~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~ 115 (283)
T 3tjm_A 49 IPTYGLQCTRA-------------APLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 115 (283)
T ss_dssp SCEEEECCCTT-------------SCCSCHHHHHHHHHHHHTTTCCSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred ceEEEEecCCC-------------CCCCCHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccc
Confidence 89999999641 1346899999999999999864 7999999999999999999866 78898
Q ss_pred hceEeccCcc
Q 024971 80 GMILLNISLR 89 (260)
Q Consensus 80 ~lvl~~~~~~ 89 (260)
+++++++.+.
T Consensus 116 ~lvlid~~~~ 125 (283)
T 3tjm_A 116 SLFLFDGSPT 125 (283)
T ss_dssp EEEEESCCTT
T ss_pred eEEEEcCCch
Confidence 9999998653
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-18 Score=126.87 Aligned_cols=74 Identities=12% Similarity=0.057 Sum_probs=62.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc---cchhhc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP---EICRGM 81 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~l 81 (260)
+||+|+++|+||||.++. ..+.+++++.+..+++..+.+++++|||||||.++..++..+| ++|+++
T Consensus 59 ~G~~v~~~d~~g~g~~~~----------~~~~~~l~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~l 128 (317)
T 1tca_A 59 LGYTPCWISPPPFMLNDT----------QVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRL 128 (317)
T ss_dssp TTCEEEEECCTTTTCSCH----------HHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEE
T ss_pred CCCEEEEECCCCCCCCcH----------HHHHHHHHHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEE
Confidence 589999999999987643 2245677777777788888889999999999999999988876 789999
Q ss_pred eEeccCc
Q 024971 82 ILLNISL 88 (260)
Q Consensus 82 vl~~~~~ 88 (260)
|+++++.
T Consensus 129 V~l~~~~ 135 (317)
T 1tca_A 129 MAFAPDY 135 (317)
T ss_dssp EEESCCT
T ss_pred EEECCCC
Confidence 9999864
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-17 Score=119.62 Aligned_cols=84 Identities=13% Similarity=0.109 Sum_probs=62.5
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCC---------------CCCCcc-HHHHHHHHHHHHHhh-cC--CceEEEEeChhhHH
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFF---------------DKPFYT-FETWASQLNDFCKDV-VK--DQAFFICNSIGGLV 66 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~---------------~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~lvGhS~Gg~~ 66 (260)
||.|+++|.||+|.|......... ....+. .+.+++++..+++.. +. ++++++||||||.+
T Consensus 74 g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~ 153 (278)
T 3e4d_A 74 GLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHG 153 (278)
T ss_dssp TCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHH
T ss_pred CeEEEecCCcccCcccccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHH
Confidence 899999999999988654311000 001112 334455777777765 55 78999999999999
Q ss_pred HHHHHhhCccchhhceEeccCcc
Q 024971 67 GLQAAVMEPEICRGMILLNISLR 89 (260)
Q Consensus 67 a~~~a~~~p~~v~~lvl~~~~~~ 89 (260)
++.+|.++|++++++++++|...
T Consensus 154 a~~~a~~~p~~~~~~v~~~~~~~ 176 (278)
T 3e4d_A 154 AMTIALKNPERFKSCSAFAPIVA 176 (278)
T ss_dssp HHHHHHHCTTTCSCEEEESCCSC
T ss_pred HHHHHHhCCcccceEEEeCCccc
Confidence 99999999999999999998754
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=118.23 Aligned_cols=175 Identities=10% Similarity=0.054 Sum_probs=109.3
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhC---ccc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVME---PEI 77 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~---p~~ 77 (260)
.|+.+++|+++|+||++ ++++++.+.++.+. .++++++||||||.+|+.+|.+. +++
T Consensus 44 ~l~~~~~v~~~d~~g~~-------------------~~~~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~ 104 (244)
T 2cb9_A 44 QLNHKAAVYGFHFIEED-------------------SRIEQYVSRITEIQPEGPYVLLGYSAGGNLAFEVVQAMEQKGLE 104 (244)
T ss_dssp HTTTTSEEEEECCCCST-------------------THHHHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCC
T ss_pred HhCCCceEEEEcCCCHH-------------------HHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCC
Confidence 36778999999999862 23566667777775 56899999999999999999876 467
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
+.+++++++..... .+........+...+ .+.....+..
T Consensus 105 v~~lvl~~~~~~~~-----~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~--- 143 (244)
T 2cb9_A 105 VSDFIIVDAYKKDQ-----SITADTENDDSAAYL---------------------------------PEAVRETVMQ--- 143 (244)
T ss_dssp EEEEEEESCCCCCS-----CCCCC-------CCS---------------------------------CHHHHHHHTH---
T ss_pred ccEEEEEcCCCCcc-----cccccccHHHHHHHh---------------------------------HHHHHHHHHH---
Confidence 99999999864311 000000000000000 0000000000
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecC--CCCCCChHHHHHhhccCC-CccEEEeCCCCC--Ccchhchh
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGD--KDPWEPIELGRAYGNFDS-VEDFIVLPNVGH--CPQVSLYL 232 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~--~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH--~~~~~~p~ 232 (260)
....+..+.. . ......+++|+++++|+ +|.. +++....+.+..+ +.+++.+++ || ++..++++
T Consensus 144 ---~~~~~~~~~~-~-----~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~ 212 (244)
T 2cb9_A 144 ---KKRCYQEYWA-Q-----LINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAEEGYAEYTGYG-AHKDMLEGEFAE 212 (244)
T ss_dssp ---HHHHHHHHHH-H-----CCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBSSCEEEEECSS-BGGGTTSHHHHH
T ss_pred ---HHHHHHHHHH-h-----hccCCCcCCCEEEEEccCccccc-cccchhHHHHhcCCCCEEEEecC-ChHHHcChHHHH
Confidence 0001111110 0 12356789999999999 8873 4444444555543 688999996 99 78788999
Q ss_pred HHHHHHHHhhhhccc
Q 024971 233 SLSSACLHTLSYLHT 247 (260)
Q Consensus 233 ~~~~~i~~~l~~~~~ 247 (260)
++++.|.+|++....
T Consensus 213 ~~~~~i~~~L~~~~~ 227 (244)
T 2cb9_A 213 KNANIILNILDKINS 227 (244)
T ss_dssp HHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhcCcc
Confidence 999999999986654
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=118.32 Aligned_cols=180 Identities=10% Similarity=0.015 Sum_probs=107.5
Q ss_pred cEEEEEcCCCCCCCCCCCCC----C-------CCCCCCccHHHHHHHHHHHHHh----hcCCceEEEEeChhhHHHHHHH
Q 024971 7 HRVYSIDLIGYGYSDKPNPR----D-------FFDKPFYTFETWASQLNDFCKD----VVKDQAFFICNSIGGLVGLQAA 71 (260)
Q Consensus 7 ~~v~~~D~~G~G~S~~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lvGhS~Gg~~a~~~a 71 (260)
++|+.+|.+++|.+...... . +......++.++++++.++++. ++.++++++||||||.+++.++
T Consensus 36 ~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~ 115 (249)
T 3fle_A 36 NEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYM 115 (249)
T ss_dssp SCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHH
T ss_pred ceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHH
Confidence 47999999999975321100 0 0001123555566666555544 4788999999999999999999
Q ss_pred hhCcc-----chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccH
Q 024971 72 VMEPE-----ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTE 146 (260)
Q Consensus 72 ~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (260)
.++|+ +|+++|+++++............ . .. +. . ........
T Consensus 116 ~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~----~---~~-~~-----------------------~-~g~p~~~~- 162 (249)
T 3fle_A 116 KNYGDDRHLPQLKKEVNIAGVYNGILNMNENVN----E---II-VD-----------------------K-QGKPSRMN- 162 (249)
T ss_dssp HHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTT----T---SC-BC-----------------------T-TCCBSSCC-
T ss_pred HHCcccccccccceEEEeCCccCCcccccCCcc----h---hh-hc-----------------------c-cCCCcccC-
Confidence 99874 79999999987543211000000 0 00 00 0 00000001
Q ss_pred HHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecC------CCCCCChHHHHHhhccCCC----ccE
Q 024971 147 ELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGD------KDPWEPIELGRAYGNFDSV----EDF 216 (260)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~----~~~ 216 (260)
..+..+... ...+++.++|+|.|+|+ .|..+|...++.+...+++ -+.
T Consensus 163 ----------------~~~~~l~~~------~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e 220 (249)
T 3fle_A 163 ----------------AAYRQLLSL------YKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQE 220 (249)
T ss_dssp ----------------HHHHHTGGG------HHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEE
T ss_pred ----------------HHHHHHHHH------HhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEE
Confidence 111111000 23345467999999998 6999999888655433332 244
Q ss_pred EEeCC--CCCCcchhchhHHHHHHHHhh
Q 024971 217 IVLPN--VGHCPQVSLYLSLSSACLHTL 242 (260)
Q Consensus 217 ~~~~~--~gH~~~~~~p~~~~~~i~~~l 242 (260)
+++.| +.|....+++ ++.+.|.+||
T Consensus 221 ~~v~g~~a~Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 221 MKFKGAKAQHSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp EEEESGGGSTGGGGGCH-HHHHHHHHHH
T ss_pred EEEeCCCCchhccccCH-HHHHHHHHHh
Confidence 55654 8999988876 8888888887
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.8e-17 Score=120.94 Aligned_cols=86 Identities=9% Similarity=0.035 Sum_probs=58.0
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCC--CCCccHHHHHHHHHHHHHhhcC---CceEEEEeChhhHHHHHHHhhCcc-
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFD--KPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEPE- 76 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~- 76 (260)
|++||+|+++|+||+|.|+..... +.. ....++.+.++.+..+++.++. ++++++||||||.+++.+|..+|+
T Consensus 107 l~~Gy~Vv~~D~rG~G~s~~~~~~-~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~ 185 (377)
T 4ezi_A 107 NSAGYMTVMPDYLGLGDNELTLHP-YVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKE 185 (377)
T ss_dssp TTTCCEEEEECCTTSTTCCCSSCC-TTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHH
T ss_pred HhCCcEEEEeCCCCCCCCCCCCcc-cccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhh
Confidence 378999999999999999862210 000 0011233334444455555554 689999999999999999988765
Q ss_pred ----chhhceEeccCcc
Q 024971 77 ----ICRGMILLNISLR 89 (260)
Q Consensus 77 ----~v~~lvl~~~~~~ 89 (260)
.+.+.+..+++..
T Consensus 186 ~~~l~l~g~~~~~~p~d 202 (377)
T 4ezi_A 186 YPDLPVSAVAPGSAPYG 202 (377)
T ss_dssp CTTSCCCEEEEESCCCC
T ss_pred CCCCceEEEEecCcccC
Confidence 3667777776653
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.74 E-value=6.5e-17 Score=114.50 Aligned_cols=182 Identities=13% Similarity=0.064 Sum_probs=106.8
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCc---cch
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEP---EIC 78 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p---~~v 78 (260)
|++ ++|+++|+||+|. .++++.++++.+.. ++++++||||||.+|+.+|.+.+ +++
T Consensus 40 l~~-~~v~~~d~~g~~~-------------------~~~~~~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v 99 (230)
T 1jmk_C 40 LPS-YKLCAFDFIEEED-------------------RLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIV 99 (230)
T ss_dssp CTT-EEEEEECCCCSTT-------------------HHHHHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCE
T ss_pred cCC-CeEEEecCCCHHH-------------------HHHHHHHHHHHhCCCCCeEEEEECHhHHHHHHHHHHHHHcCCCc
Confidence 566 9999999998752 23455666666654 58999999999999999998765 569
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
++++++++...... ..+...... ..... .+.................+..
T Consensus 100 ~~lvl~~~~~~~~~---~~~~~~~~~---------~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~---- 149 (230)
T 1jmk_C 100 QRIIMVDSYKKQGV---SDLDGRTVE---------SDVEA--------------LMNVNRDNEALNSEAVKHGLKQ---- 149 (230)
T ss_dssp EEEEEESCCEECCC---C-----------------CCHHH--------------HHHHTTTCSGGGSHHHHHHHHH----
T ss_pred cEEEEECCCCCCcc---cccccccHH---------HHHHH--------------HHhcChhhhhhhhHHHHHHHHH----
Confidence 99999997643210 000000000 00000 0000000000011111111100
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC-CCccEEEeCCCCC--CcchhchhHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-SVEDFIVLPNVGH--CPQVSLYLSLS 235 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH--~~~~~~p~~~~ 235 (260)
....+..+.. . ......+++|+++++|++|..++. ....+.+.. ++.+++.+++ || ++..+++++++
T Consensus 150 --~~~~~~~~~~-~-----~~~~~~~~~P~l~i~g~~D~~~~~-~~~~w~~~~~~~~~~~~i~g-~H~~~~~~~~~~~~~ 219 (230)
T 1jmk_C 150 --KTHAFYSYYV-N-----LISTGQVKADIDLLTSGADFDIPE-WLASWEEATTGAYRMKRGFG-THAEMLQGETLDRNA 219 (230)
T ss_dssp --HHHHHHHHHH-H-----CCCCSCBSSEEEEEECSSCCCCCT-TEECSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHH
T ss_pred --HHHHHHHHhh-h-----ccccccccccEEEEEeCCCCCCcc-ccchHHHhcCCCeEEEEecC-ChHHHcCcHhHHHHH
Confidence 0001111110 0 123567899999999999998773 233344443 4578999996 99 88888999999
Q ss_pred HHHHHhhhh
Q 024971 236 SACLHTLSY 244 (260)
Q Consensus 236 ~~i~~~l~~ 244 (260)
+.|.+|++.
T Consensus 220 ~~i~~~l~~ 228 (230)
T 1jmk_C 220 GILLEFLNT 228 (230)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhh
Confidence 999999853
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-17 Score=136.16 Aligned_cols=185 Identities=15% Similarity=0.092 Sum_probs=111.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
++||.|+++|+||+|.+....... ..........+|+.++++.+ ..+++.++|||+||.+++.++.++|++
T Consensus 473 ~~G~~v~~~d~rG~g~~g~~~~~~---~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~ 549 (695)
T 2bkl_A 473 DAGGVYAVANLRGGGEYGKAWHDA---GRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPEL 549 (695)
T ss_dssp HTTCEEEEECCTTSSTTCHHHHHT---TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG
T ss_pred hCCCEEEEEecCCCCCcCHHHHHh---hHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcc
Confidence 579999999999998764321000 01112223334444444444 345899999999999999999999999
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
++++|+.+|........ .. ..... .... +... ...+....+
T Consensus 550 ~~~~v~~~~~~d~~~~~--------------~~----~~~~~---------~~~~-----~g~~--~~~~~~~~~----- 590 (695)
T 2bkl_A 550 YGAVVCAVPLLDMVRYH--------------LF----GSGRT---------WIPE-----YGTA--EKPEDFKTL----- 590 (695)
T ss_dssp CSEEEEESCCCCTTTGG--------------GS----TTGGG---------GHHH-----HCCT--TSHHHHHHH-----
T ss_pred eEEEEEcCCccchhhcc--------------cc----CCCcc---------hHHH-----hCCC--CCHHHHHHH-----
Confidence 99999999875331100 00 00000 0000 0000 001111110
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCC--CCEEEEecCCCCCCChHHHHHhhccC-------CCccEEEeCCCCCCcc-
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVK--CPVLIAWGDKDPWEPIELGRAYGNFD-------SVEDFIVLPNVGHCPQ- 227 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~l~i~g~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~- 227 (260)
..+ .+...+.+++ +|+|+++|++|..+++...+.+.+.+ ..+++++++++||...
T Consensus 591 -----------~~~----sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~ 655 (695)
T 2bkl_A 591 -----------HAY----SPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGAD 655 (695)
T ss_dssp -----------HHH----CGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCS
T ss_pred -----------Hhc----ChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCC
Confidence 000 1123344544 69999999999999988776655543 3478899999999873
Q ss_pred -hhchhHHHHHHHHhhhhc
Q 024971 228 -VSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 228 -~~~p~~~~~~i~~~l~~~ 245 (260)
.+++.+....+.+|+...
T Consensus 656 ~~~~~~~~~~~~~~fl~~~ 674 (695)
T 2bkl_A 656 QVAKAIESSVDLYSFLFQV 674 (695)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 456677777888888644
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.74 E-value=6.9e-17 Score=120.01 Aligned_cols=186 Identities=10% Similarity=-0.035 Sum_probs=107.4
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh-hcCCceEEEEeChhhHHHHHHHhhCccc----hh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VVKDQAFFICNSIGGLVGLQAAVMEPEI----CR 79 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~----v~ 79 (260)
.||.|+++|+|+.+.... ...+++..+.+..+.++ ++.++++++|||+||.+|+.++.+.+++ ++
T Consensus 110 ~g~~vv~~dyr~~p~~~~----------~~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~ 179 (322)
T 3fak_A 110 SQAAALLLDYRLAPEHPF----------PAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPA 179 (322)
T ss_dssp HTSEEEEECCCCTTTSCT----------THHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCS
T ss_pred cCCEEEEEeCCCCCCCCC----------CcHHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCce
Confidence 389999999998765432 23456666666666665 4456899999999999999999988775 89
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|+++|....... . ........... ....... ......+.......
T Consensus 180 ~~vl~~p~~~~~~~-------~---~~~~~~~~~~~--------~~~~~~~---------------~~~~~~~~~~~~~~ 226 (322)
T 3fak_A 180 SAIPISPWADMTCT-------N---DSFKTRAEADP--------MVAPGGI---------------NKMAARYLNGADAK 226 (322)
T ss_dssp EEEEESCCCCTTCC-------C---THHHHTTTTCC--------SCCSSHH---------------HHHHHHHHTTSCTT
T ss_pred EEEEECCEecCcCC-------C---cCHHHhCccCc--------ccCHHHH---------------HHHHHHhcCCCCCC
Confidence 99999997543110 0 00000000000 0000000 01111111100000
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCCh--HHHHHhhccCCCccEEEeCCCCCCcc-----hhchh
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPI--ELGRAYGNFDSVEDFIVLPNVGHCPQ-----VSLYL 232 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~-----~~~p~ 232 (260)
.. . .......+.. ..|+++++|++|.+++. ...+.+.+....+++++++|++|... .+..+
T Consensus 227 ~~----------~-~sp~~~~~~~-~pP~li~~g~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~ 294 (322)
T 3fak_A 227 HP----------Y-ASPNFANLKG-LPPLLIHVGRDEVLLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGK 294 (322)
T ss_dssp CT----------T-TCGGGSCCTT-CCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHH
T ss_pred Cc----------c-cCCCcccccC-CChHhEEEcCcCccHHHHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHH
Confidence 00 0 0000111222 24999999999987542 12334445555689999999999755 44578
Q ss_pred HHHHHHHHhhhhc
Q 024971 233 SLSSACLHTLSYL 245 (260)
Q Consensus 233 ~~~~~i~~~l~~~ 245 (260)
++.+.+.+||+..
T Consensus 295 ~~~~~i~~fl~~~ 307 (322)
T 3fak_A 295 QAIVRVGEFMREQ 307 (322)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888898998653
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-16 Score=119.21 Aligned_cols=194 Identities=14% Similarity=-0.009 Sum_probs=106.9
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh------hcCC-ceEEEEeChhhHHHHHHHhhCcc--
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD------VVKD-QAFFICNSIGGLVGLQAAVMEPE-- 76 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~lvGhS~Gg~~a~~~a~~~p~-- 76 (260)
||.|+++|+|+.+.... ...++|....+..+.+. .+.+ +++|+|||+||.+|+.++.+.++
T Consensus 145 g~~Vv~~dyR~~p~~~~----------~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~ 214 (365)
T 3ebl_A 145 KGVVVSVNYRRAPEHRY----------PCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEG 214 (365)
T ss_dssp TSEEEEECCCCTTTSCT----------THHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeeCCCCCCCCC----------cHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcC
Confidence 89999999998654322 12334444333333322 2334 89999999999999999998776
Q ss_pred -chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhcc
Q 024971 77 -ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (260)
Q Consensus 77 -~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
+++++|+++|...... . ........... .........+. ..+...
T Consensus 215 ~~~~g~vl~~p~~~~~~--------~--~~~~~~~~~~~---------~~~~~~~~~~~---------------~~~~~~ 260 (365)
T 3ebl_A 215 VKVCGNILLNAMFGGTE--------R--TESERRLDGKY---------FVTLQDRDWYW---------------KAYLPE 260 (365)
T ss_dssp CCCCEEEEESCCCCCSS--------C--CHHHHHHTTTS---------SCCHHHHHHHH---------------HHHSCT
T ss_pred CceeeEEEEccccCCCc--------C--ChhhhhcCCCc---------ccCHHHHHHHH---------------HHhCCC
Confidence 7999999998753210 0 00000000000 00000011111 111100
Q ss_pred CCccchHHHHHHHHhhhCCCCCCccCCCCC-CCEEEEecCCCCCCCh--HHHHHhhccCCCccEEEeCCCCCCcc----h
Q 024971 156 GLETGAADVFLEFICYSGGPLPEELLPQVK-CPVLIAWGDKDPWEPI--ELGRAYGNFDSVEDFIVLPNVGHCPQ----V 228 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~----~ 228 (260)
....... ...........++.+. .|+|+++|++|.+++. ...+.+.+....+++++++|++|..+ .
T Consensus 261 ~~~~~~~-------~~~p~~~~~~~l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~ 333 (365)
T 3ebl_A 261 DADRDHP-------ACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNT 333 (365)
T ss_dssp TCCTTST-------TTCTTSTTCCCCTTSCCCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCS
T ss_pred CCCCCCc-------ccCCCCCcchhhccCCCCCEEEEEcCcccchhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCC
Confidence 0000000 0000000012233323 4899999999987654 23444555566789999999999755 5
Q ss_pred hchhHHHHHHHHhhhhcccccc
Q 024971 229 SLYLSLSSACLHTLSYLHTCRC 250 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~~~~~~~ 250 (260)
++.+++.+.+.+||+...+.++
T Consensus 334 ~~~~~~~~~i~~Fl~~~~~~~~ 355 (365)
T 3ebl_A 334 VHYHEVMEEISDFLNANLYYGS 355 (365)
T ss_dssp HHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHhhhccc
Confidence 6788899999999976654443
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-17 Score=136.93 Aligned_cols=187 Identities=14% Similarity=0.111 Sum_probs=112.0
Q ss_pred CccEEEEEcCCCCCCCCCCCCCC-CCCCCCccHHHHHHHHHHHHHh--hcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
+||.|+++|+||+|.+....... ........++++.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++
T Consensus 495 ~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~ 574 (710)
T 2xdw_A 495 MGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCV 574 (710)
T ss_dssp HCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEE
T ss_pred CCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEE
Confidence 79999999999999763211000 0000122344555555554444 13468999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|+.+|......... . . .... .... +... ...+....+
T Consensus 575 v~~~~~~d~~~~~~--------------~-~---~~~~---------~~~~-----~g~~--~~~~~~~~~--------- 611 (710)
T 2xdw_A 575 IAQVGVMDMLKFHK--------------Y-T---IGHA---------WTTD-----YGCS--DSKQHFEWL--------- 611 (710)
T ss_dssp EEESCCCCTTTGGG--------------S-T---TGGG---------GHHH-----HCCT--TSHHHHHHH---------
T ss_pred EEcCCcccHhhccc--------------c-C---CChh---------HHHh-----CCCC--CCHHHHHHH---------
Confidence 99998653211000 0 0 0000 0000 0000 001111111
Q ss_pred HHHHHHHHhhhCCCCCCccCC-----CCCC-CEEEEecCCCCCCChHHHHHhhccC-----------CCccEEEeCCCCC
Q 024971 162 ADVFLEFICYSGGPLPEELLP-----QVKC-PVLIAWGDKDPWEPIELGRAYGNFD-----------SVEDFIVLPNVGH 224 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-----~i~~-P~l~i~g~~D~~~~~~~~~~~~~~~-----------~~~~~~~~~~~gH 224 (260)
. .+ .+...+. ++++ |+|+++|++|..+++.....+.+.+ ..+++++++++||
T Consensus 612 ----~---~~----sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH 680 (710)
T 2xdw_A 612 ----I---KY----SPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGH 680 (710)
T ss_dssp ----H---HH----CGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCS
T ss_pred ----H---Hh----CcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCc
Confidence 0 00 0122334 6777 9999999999999988766654433 2358889999999
Q ss_pred Ccch--hchhHHHHHHHHhhhhc
Q 024971 225 CPQV--SLYLSLSSACLHTLSYL 245 (260)
Q Consensus 225 ~~~~--~~p~~~~~~i~~~l~~~ 245 (260)
.... +++.++.+.+.+||...
T Consensus 681 ~~~~~~~~~~~~~~~~~~fl~~~ 703 (710)
T 2xdw_A 681 GAGKPTAKVIEEVSDMFAFIARC 703 (710)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 8765 34567788888888643
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.73 E-value=1e-16 Score=111.42 Aligned_cols=153 Identities=13% Similarity=0.130 Sum_probs=99.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---c--CCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---V--KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+++.|+++|.+|++.-+....... ......+++..+.+..+++.+ + .++++++|+|+||.+++.++.++|+++.
T Consensus 48 ~~~~v~~P~~~g~~w~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~ 126 (210)
T 4h0c_A 48 DEMAIYAPQATNNSWYPYSFMAPV-QQNQPALDSALALVGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYG 126 (210)
T ss_dssp TTEEEEEECCGGGCSSSSCTTSCG-GGGTTHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCS
T ss_pred CCeEEEeecCCCCCccccccCCCc-ccchHHHHHHHHHHHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCC
Confidence 689999999998763221110000 011234444455555554443 3 3589999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|.+++...... ....
T Consensus 127 ~vv~~sg~l~~~~--------------------------------------------------~~~~------------- 143 (210)
T 4h0c_A 127 GIIAFTGGLIGQE--------------------------------------------------LAIG------------- 143 (210)
T ss_dssp EEEEETCCCCSSS--------------------------------------------------CCGG-------------
T ss_pred EEEEecCCCCChh--------------------------------------------------hhhh-------------
Confidence 9999987531100 0000
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhc----cCCCccEEEeCCCCCCcchhchhHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
.......++|+++++|++|.++|.+..+.+.+ ...+++++++||.||.+. ++++
T Consensus 144 ------------------~~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~---~~el- 201 (210)
T 4h0c_A 144 ------------------NYKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS---GDEI- 201 (210)
T ss_dssp ------------------GCCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC---HHHH-
T ss_pred ------------------hhhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC---HHHH-
Confidence 00011124799999999999999987766443 344578999999999874 3443
Q ss_pred HHHHHhhh
Q 024971 236 SACLHTLS 243 (260)
Q Consensus 236 ~~i~~~l~ 243 (260)
+.+.+||.
T Consensus 202 ~~i~~wL~ 209 (210)
T 4h0c_A 202 QLVNNTIL 209 (210)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHHc
Confidence 45667764
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.73 E-value=4e-17 Score=116.57 Aligned_cols=169 Identities=9% Similarity=-0.068 Sum_probs=104.6
Q ss_pred ccEEEEEcCC---------------------CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhh
Q 024971 6 SHRVYSIDLI---------------------GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGG 64 (260)
Q Consensus 6 ~~~v~~~D~~---------------------G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg 64 (260)
||+|+++|+| |+|.+...... .......++++.++.+.+.++..+ ++++|+||||||
T Consensus 36 g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~-~~~~~~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg 113 (243)
T 1ycd_A 36 NVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYH-SEISHELDISEGLKSVVDHIKANG-PYDGIVGLSQGA 113 (243)
T ss_dssp TCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCC-CSSGGGCCCHHHHHHHHHHHHHHC-CCSEEEEETHHH
T ss_pred ceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccC-CCCcchhhHHHHHHHHHHHHHhcC-CeeEEEEeChHH
Confidence 8999999999 44443211000 000112467777777777776544 578999999999
Q ss_pred HHHHHHHhhCcc------chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhcc
Q 024971 65 LVGLQAAVMEPE------ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY 138 (260)
Q Consensus 65 ~~a~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (260)
.+|+.+|.+++. .++.++++++....... . . .
T Consensus 114 ~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~----------~-------~-------------------------~ 151 (243)
T 1ycd_A 114 ALSSIITNKISELVPDHPQFKVSVVISGYSFTEPD----------P-------E-------------------------H 151 (243)
T ss_dssp HHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEEC----------T-------T-------------------------S
T ss_pred HHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcc----------c-------c-------------------------c
Confidence 999999987643 34555555543211000 0 0 0
Q ss_pred CCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCc----
Q 024971 139 NDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE---- 214 (260)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---- 214 (260)
......... + .. ....+.++++|+++++|++|.++|.+..+.+.+.+++.
T Consensus 152 ~~~~~~~~~----~-------------------~~---~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~ 205 (243)
T 1ycd_A 152 PGELRITEK----F-------------------RD---SFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGN 205 (243)
T ss_dssp TTCEEECGG----G-------------------TT---TTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTC
T ss_pred ccccccchh----H-------------------HH---hccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhcccc
Confidence 000000000 0 00 01234568899999999999999999888877665442
Q ss_pred ---cEEEeCCCCCCcchhchhHHHHHHHHhhhhcc
Q 024971 215 ---DFIVLPNVGHCPQVSLYLSLSSACLHTLSYLH 246 (260)
Q Consensus 215 ---~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~~~ 246 (260)
...+++++||+...+ +++.+.+.+|++..-
T Consensus 206 ~~~~~~~~~~~gH~~~~~--~~~~~~i~~fl~~~~ 238 (243)
T 1ycd_A 206 KEKVLAYEHPGGHMVPNK--KDIIRPIVEQITSSL 238 (243)
T ss_dssp TTTEEEEEESSSSSCCCC--HHHHHHHHHHHHHHH
T ss_pred ccccEEEecCCCCcCCch--HHHHHHHHHHHHHhh
Confidence 556677789987765 358889999997643
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=136.19 Aligned_cols=189 Identities=14% Similarity=0.079 Sum_probs=107.2
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCC-CCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPR-DFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+++||.|+++|+||+|.+...... ........+++++++.+..+++.- ..+++.++|||+||.+++.++.++|++++
T Consensus 514 ~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~ 593 (741)
T 1yr2_A 514 IDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFA 593 (741)
T ss_dssp HTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCS
T ss_pred HHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhhe
Confidence 367999999999999987321100 000001223555555555555542 34689999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|+.+|....... ... ...... ... +... ...+..+.+.
T Consensus 594 ~~v~~~~~~d~~~~--------------~~~----~~~~~~---------~~~-----~g~~--~~~~~~~~~~------ 633 (741)
T 1yr2_A 594 AASPAVGVMDMLRF--------------DQF----TAGRYW---------VDD-----YGYP--EKEADWRVLR------ 633 (741)
T ss_dssp EEEEESCCCCTTSG--------------GGS----TTGGGG---------HHH-----HCCT--TSHHHHHHHH------
T ss_pred EEEecCCccccccc--------------cCC----CCCchh---------HHH-----cCCC--CCHHHHHHHH------
Confidence 99999886532110 000 000000 000 0000 0011111111
Q ss_pred chHHHHHHHHhhhCCCCCCccCCC-CCC-CEEEEecCCCCCCChHHHHHhhccCC-------CccEEEeCCCCCCcchh-
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQ-VKC-PVLIAWGDKDPWEPIELGRAYGNFDS-------VEDFIVLPNVGHCPQVS- 229 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~-P~l~i~g~~D~~~~~~~~~~~~~~~~-------~~~~~~~~~~gH~~~~~- 229 (260)
...+...+.+ +++ |+|+++|++|..+++...+.+.+.++ .+++++++++||.....
T Consensus 634 --------------~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~ 699 (741)
T 1yr2_A 634 --------------RYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPI 699 (741)
T ss_dssp --------------TTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CH
T ss_pred --------------HcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCH
Confidence 1111234555 775 99999999999999887766554432 37889999999987653
Q ss_pred -chhHHHHHHHHhhhhc
Q 024971 230 -LYLSLSSACLHTLSYL 245 (260)
Q Consensus 230 -~p~~~~~~i~~~l~~~ 245 (260)
++.++.+.+.+|+...
T Consensus 700 ~~~~~~~~~~~~fl~~~ 716 (741)
T 1yr2_A 700 DKQIEETADVQAFLAHF 716 (741)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 3457788888888543
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.72 E-value=3.6e-16 Score=113.96 Aligned_cols=85 Identities=15% Similarity=0.212 Sum_probs=60.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCC-C-------CCC--C----CCcc-HHHHHHHHHHHHHh-hcC-CceEEEEeChhhHHH
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPR-D-------FFD--K----PFYT-FETWASQLNDFCKD-VVK-DQAFFICNSIGGLVG 67 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~-~-------~~~--~----~~~~-~~~~~~~~~~~~~~-~~~-~~~~lvGhS~Gg~~a 67 (260)
.|+.|+++|.+|+|.+...... + ... . .... .+.+++++..+++. +.. ++++++||||||.+|
T Consensus 76 ~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a 155 (280)
T 3i6y_A 76 LGIAIVAPDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGA 155 (280)
T ss_dssp HTCEEEEECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHH
T ss_pred CCeEEEEeCCcccccccCcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHH
Confidence 4799999999988876443210 0 000 0 0112 33345677777754 344 789999999999999
Q ss_pred HHHHhhCccchhhceEeccCcc
Q 024971 68 LQAAVMEPEICRGMILLNISLR 89 (260)
Q Consensus 68 ~~~a~~~p~~v~~lvl~~~~~~ 89 (260)
+.++.++|++++++++++|...
T Consensus 156 ~~~a~~~p~~~~~~v~~s~~~~ 177 (280)
T 3i6y_A 156 LTIALRNPERYQSVSAFSPINN 177 (280)
T ss_dssp HHHHHHCTTTCSCEEEESCCCC
T ss_pred HHHHHhCCccccEEEEeCCccc
Confidence 9999999999999999998653
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-16 Score=115.43 Aligned_cols=202 Identities=11% Similarity=-0.016 Sum_probs=108.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-----CCceEEEEeChhhHHHHHHHh---hCc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAAV---MEP 75 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~lvGhS~Gg~~a~~~a~---~~p 75 (260)
..||+|+++|+|+.+.. .+...++|+.++++.+. .++++++|+|+||.+|+.++. ..+
T Consensus 56 ~~g~~Vi~vdYrlaPe~--------------~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~ 121 (274)
T 2qru_A 56 SNGYTVLALDYLLAPNT--------------KIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLN 121 (274)
T ss_dssp TTTEEEEEECCCCTTTS--------------CHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTT
T ss_pred HCCCEEEEeCCCCCCCC--------------CCcHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCC
Confidence 35899999999975421 44556666666665553 689999999999999999987 356
Q ss_pred cchhhceEeccCccccccCCCCCCCcch--hHHHhhhhhhhhhHHHHHHHhcChHHHHHH-HHhccCCCCcccHHHHHHH
Q 024971 76 EICRGMILLNISLRMLHIKKQPWYGRPL--IRSFQNLLRNTAAGKLFYKMVATSESVRNI-LCQCYNDTSQVTEELVEKI 152 (260)
Q Consensus 76 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 152 (260)
.++++++++.+...............+. ............... ...... .... ..... ..+. .+
T Consensus 122 ~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~-------~~~~-~~ 188 (274)
T 2qru_A 122 LTPQFLVNFYGYTDLEFIKEPRKLLKQAISAKEIAAIDQTKPVWD---DPFLSR--YLLYHYSIQQ-------ALLP-HF 188 (274)
T ss_dssp CCCSCEEEESCCSCSGGGGSCCCSCSSCCCSGGGTTSCCSSCCSC---CTTCTT--HHHHHHHHHT-------TCHH-HH
T ss_pred CCceEEEEEcccccccccCCchhhccccccHHHHhhhcccCCCCC---Cccccc--hhhhhhhhhh-------cchh-hc
Confidence 7899999887754311100000000000 000000000000000 000000 0000 00000 0000 00
Q ss_pred hccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchh
Q 024971 153 LQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~ 232 (260)
......... .........+..+ .|+++++|+.|..++....+.+.+..++++++++++++|.++.+.+.
T Consensus 189 ~~~~~~~~~----------~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~l~~~~~~~~l~~~~g~~H~~~~~~~~ 257 (274)
T 2qru_A 189 YGLPENGDW----------SAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKKIGRTIPESTFKAVYYLEHDFLKQTKD 257 (274)
T ss_dssp HTCCTTSCC----------GGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHHHHHHSTTCEEEEECSCCSCGGGGTTS
T ss_pred cCccccccc----------ccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHHHHHhCCCcEEEEcCCCCcCCccCcCC
Confidence 000000000 0000001123455 79999999999999988888898888899999999999987766444
Q ss_pred ----HHHHHHHHhhh
Q 024971 233 ----SLSSACLHTLS 243 (260)
Q Consensus 233 ----~~~~~i~~~l~ 243 (260)
++.+.+.+||+
T Consensus 258 ~~~~~~~~~~~~fl~ 272 (274)
T 2qru_A 258 PSVITLFEQLDSWLK 272 (274)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 44666666764
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-17 Score=120.61 Aligned_cols=78 Identities=13% Similarity=0.055 Sum_probs=60.5
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-C-CceEEEEeChhhHHHHHHHhhCccc-hhhce
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-K-DQAFFICNSIGGLVGLQAAVMEPEI-CRGMI 82 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lv 82 (260)
|++|+++|+ |||.|+.... ....++.+.++++.+.++... . +++++|||||||.++..++.++|++ |+++|
T Consensus 37 g~~v~~~d~-G~g~s~~~~~-----~~~~~~~~~~~~~~~~l~~~~~l~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv 110 (279)
T 1ei9_A 37 GIHVLSLEI-GKTLREDVEN-----SFFLNVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLI 110 (279)
T ss_dssp TCCEEECCC-SSSHHHHHHH-----HHHSCHHHHHHHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEE
T ss_pred CcEEEEEEe-CCCCcccccc-----ccccCHHHHHHHHHHHHHhhhhccCCEEEEEECHHHHHHHHHHHHcCCcccceEE
Confidence 679999998 9998853210 012366777777777776532 2 6899999999999999999999984 99999
Q ss_pred EeccCcc
Q 024971 83 LLNISLR 89 (260)
Q Consensus 83 l~~~~~~ 89 (260)
+++++..
T Consensus 111 ~~~~p~~ 117 (279)
T 1ei9_A 111 SVGGQHQ 117 (279)
T ss_dssp EESCCTT
T ss_pred EecCccC
Confidence 9997643
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.71 E-value=5.5e-17 Score=124.02 Aligned_cols=85 Identities=11% Similarity=0.031 Sum_probs=57.4
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCC-CCCCccHHHHHHHHHHHHHhhcC---CceEEEEeChhhHHHHHHHhh-Ccc-
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFF-DKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVM-EPE- 76 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~lvGhS~Gg~~a~~~a~~-~p~- 76 (260)
+++||+|+++|+||||.|......... .....++.+.++++..++++++. ++++++||||||.+++.++.. .++
T Consensus 114 ~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~ 193 (397)
T 3h2g_A 114 ASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHL 193 (397)
T ss_dssp GGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHC
T ss_pred HHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhc
Confidence 467999999999999999754310000 00013456667777788888876 689999999999999988733 332
Q ss_pred ----chhhceEeccC
Q 024971 77 ----ICRGMILLNIS 87 (260)
Q Consensus 77 ----~v~~lvl~~~~ 87 (260)
.+.+++..+++
T Consensus 194 ~~~~~~~~~~~~~~~ 208 (397)
T 3h2g_A 194 SKEFHLVASAPISGP 208 (397)
T ss_dssp TTTSEEEEEEEESCC
T ss_pred CcCcceEEEeccccc
Confidence 35555555544
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-16 Score=118.09 Aligned_cols=183 Identities=14% Similarity=0.036 Sum_probs=106.7
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh---hcC--CceEEEEeChhhHHHHHHHhhCccc--
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VVK--DQAFFICNSIGGLVGLQAAVMEPEI-- 77 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~-- 77 (260)
.||.|+++|+|+.+....+ ..+++....+..+.++ ++. ++++++|||+||.+|+.++.+++++
T Consensus 115 ~g~~vv~~dyr~~p~~~~p----------~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~ 184 (317)
T 3qh4_A 115 ARCAVVSVDYRLAPEHPYP----------AALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSL 184 (317)
T ss_dssp HTSEEEEECCCCTTTSCTT----------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSS
T ss_pred cCCEEEEecCCCCCCCCCc----------hHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCC
Confidence 3899999999987655332 2344444433333332 444 4899999999999999999887764
Q ss_pred --hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhcc
Q 024971 78 --CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQP 155 (260)
Q Consensus 78 --v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (260)
+.++++++|..... . ............ ....... .....+...
T Consensus 185 ~~~~~~vl~~p~~~~~--------~---~~~~~~~~~~~~---------~~~~~~~---------------~~~~~~~~~ 229 (317)
T 3qh4_A 185 PPVIFQLLHQPVLDDR--------P---TASRSEFRATPA---------FDGEAAS---------------LMWRHYLAG 229 (317)
T ss_dssp CCCCEEEEESCCCCSS--------C---CHHHHHTTTCSS---------SCHHHHH---------------HHHHHHHTT
T ss_pred CCeeEEEEECceecCC--------C---CcCHHHhcCCCC---------cCHHHHH---------------HHHHHhcCC
Confidence 89999999875321 0 000000000000 0000000 001111110
Q ss_pred CCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCC--hHHHHHhhccCCCccEEEeCCCCCCc-----ch
Q 024971 156 GLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP--IELGRAYGNFDSVEDFIVLPNVGHCP-----QV 228 (260)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~-----~~ 228 (260)
...... ........+.. -.|+++++|++|.+++ ....+.+.+...++++++++|++|.+ ..
T Consensus 230 ~~~~~~-----------~~p~~~~~l~~-lpP~li~~G~~D~~~~~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~ 297 (317)
T 3qh4_A 230 QTPSPE-----------SVPGRRGQLAG-LPATLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEW 297 (317)
T ss_dssp CCCCTT-----------TCGGGCSCCTT-CCCEEEEEEEESTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTS
T ss_pred CCCCcc-----------cCCCcccccCC-CCceeEEecCcCCCchhHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCc
Confidence 000000 00000111221 2499999999999887 45566677777789999999999973 34
Q ss_pred hchhHHHHHHHHhhhh
Q 024971 229 SLYLSLSSACLHTLSY 244 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~ 244 (260)
+.++++.+.+.+||+.
T Consensus 298 ~~~~~~~~~~~~~l~~ 313 (317)
T 3qh4_A 298 TTSQRLFAMQGHALAD 313 (317)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 6678888888888864
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=115.90 Aligned_cols=86 Identities=14% Similarity=0.168 Sum_probs=56.7
Q ss_pred CCccEEEEEcC--CCCCCCCCCCCCC-------CCCCCC-------ccHHHHHHHHHHHHH-hhcC--CceEEEEeChhh
Q 024971 4 AKSHRVYSIDL--IGYGYSDKPNPRD-------FFDKPF-------YTFETWASQLNDFCK-DVVK--DQAFFICNSIGG 64 (260)
Q Consensus 4 ~~~~~v~~~D~--~G~G~S~~~~~~~-------~~~~~~-------~~~~~~~~~~~~~~~-~~~~--~~~~lvGhS~Gg 64 (260)
..||.|+++|+ ||+|.+....... ...... ......++++..+++ .++. ++++++||||||
T Consensus 73 ~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG 152 (282)
T 3fcx_A 73 EHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGG 152 (282)
T ss_dssp HHTCEEEEECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHH
T ss_pred cCCeEEEEeccccCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchH
Confidence 35899999999 7776543221000 000000 112334456666666 4443 689999999999
Q ss_pred HHHHHHHhhCccchhhceEeccCcc
Q 024971 65 LVGLQAAVMEPEICRGMILLNISLR 89 (260)
Q Consensus 65 ~~a~~~a~~~p~~v~~lvl~~~~~~ 89 (260)
.+|+.+|.++|++++++++++|...
T Consensus 153 ~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (282)
T 3fcx_A 153 HGALICALKNPGKYKSVSAFAPICN 177 (282)
T ss_dssp HHHHHHHHTSTTTSSCEEEESCCCC
T ss_pred HHHHHHHHhCcccceEEEEeCCccC
Confidence 9999999999999999999998753
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.2e-16 Score=127.13 Aligned_cols=191 Identities=10% Similarity=0.043 Sum_probs=112.0
Q ss_pred CCccEEEEEcCCCCCCCCCCCC--CCCCCCCCccHHHHHHHHHHHHHh--hcCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNP--RDFFDKPFYTFETWASQLNDFCKD--VVKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
++||.|+++|+||+|.+..... .........+++++++.+..+++. ...+++.++|+|+||.+++.++.++|++++
T Consensus 536 ~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~ 615 (751)
T 2xe4_A 536 DRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFK 615 (751)
T ss_dssp TTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCS
T ss_pred hCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchhee
Confidence 5799999999999997632110 000001224566666666666665 234689999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|+.+|....... +.. ...... .. .. ..+... ...+...
T Consensus 616 a~v~~~~~~d~~~~-------------~~~--~~~~~~------------~~-~~-~~~g~p--~~~~~~~--------- 655 (751)
T 2xe4_A 616 VALAGVPFVDVMTT-------------MCD--PSIPLT------------TG-EW-EEWGNP--NEYKYYD--------- 655 (751)
T ss_dssp EEEEESCCCCHHHH-------------HTC--TTSTTH------------HH-HT-TTTCCT--TSHHHHH---------
T ss_pred EEEEeCCcchHHhh-------------hcc--cCcccc------------hh-hH-HHcCCC--CCHHHHH---------
Confidence 99999886432100 000 000000 00 00 001110 0111111
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCC-EEEEecCCCCCCChHHHHHhhccCCC----c---cEEEeCCCCCCcchhch
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCP-VLIAWGDKDPWEPIELGRAYGNFDSV----E---DFIVLPNVGHCPQVSLY 231 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~----~---~~~~~~~~gH~~~~~~p 231 (260)
.+..+ .+...+.++++| +|+++|++|..+++.....+.+.++. . .+.+++++||....+.+
T Consensus 656 -------~~~~~----sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~ 724 (751)
T 2xe4_A 656 -------YMLSY----SPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRY 724 (751)
T ss_dssp -------HHHHH----CTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHH
T ss_pred -------HHHhc----ChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChh
Confidence 01111 113455678897 99999999999998877765544321 2 34445999998775544
Q ss_pred h--HHHHHHHHhhhhc
Q 024971 232 L--SLSSACLHTLSYL 245 (260)
Q Consensus 232 ~--~~~~~i~~~l~~~ 245 (260)
+ +....+.+|+...
T Consensus 725 ~~~~~~~~~~~Fl~~~ 740 (751)
T 2xe4_A 725 KFWKESAIQQAFVCKH 740 (751)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4 3344677777543
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.7e-16 Score=119.50 Aligned_cols=151 Identities=14% Similarity=0.090 Sum_probs=104.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCC-CCCCCCCCccHHHHHHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNP-RDFFDKPFYTFETWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
..++.|+++|.||.+....... ...........++..+.+..+++..+.+ +++++||||||.+++.++.++|+++++
T Consensus 211 ~~~~~vv~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~ 290 (380)
T 3doh_A 211 VHPCFVLAPQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAA 290 (380)
T ss_dssp TSCCEEEEECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSE
T ss_pred cCCEEEEEecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceE
Confidence 3467999999998765432110 0000011345666777777777777654 799999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
++++++...
T Consensus 291 ~v~~sg~~~----------------------------------------------------------------------- 299 (380)
T 3doh_A 291 AIPICGGGD----------------------------------------------------------------------- 299 (380)
T ss_dssp EEEESCCCC-----------------------------------------------------------------------
T ss_pred EEEecCCCC-----------------------------------------------------------------------
Confidence 999998520
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCC-CCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCC--------CCCcc
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVK-CPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNV--------GHCPQ 227 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~--------gH~~~ 227 (260)
...+..++ +|+++++|++|..+|.+..+.+.+. ..+.++++++++ ||..+
T Consensus 300 -----------------~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~ 362 (380)
T 3doh_A 300 -----------------VSKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSW 362 (380)
T ss_dssp -----------------GGGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTH
T ss_pred -----------------hhhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhH
Confidence 11223333 8999999999999998877665543 345789999999 77644
Q ss_pred hhchhHHHHHHHHhhhh
Q 024971 228 VSLYLSLSSACLHTLSY 244 (260)
Q Consensus 228 ~~~p~~~~~~i~~~l~~ 244 (260)
.+... .+.+.+||..
T Consensus 363 ~~~~~--~~~i~~wL~~ 377 (380)
T 3doh_A 363 IPTYE--NQEAIEWLFE 377 (380)
T ss_dssp HHHHT--CHHHHHHHHT
T ss_pred HHhcC--CHHHHHHHHh
Confidence 32211 1256677754
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.7e-16 Score=113.19 Aligned_cols=155 Identities=15% Similarity=0.079 Sum_probs=90.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCC------------CccHHHHHHHHHHHHHh----hcCCceEEEEeChhhHHH
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKP------------FYTFETWASQLNDFCKD----VVKDQAFFICNSIGGLVG 67 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~----~~~~~~~lvGhS~Gg~~a 67 (260)
++||.|+++|+||||.|............ .........|....++. .+.+++.++|+|+||.++
T Consensus 83 ~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a 162 (259)
T 4ao6_A 83 GRGISAMAIDGPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMG 162 (259)
T ss_dssp HTTEEEEEECCCC-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHH
T ss_pred HCCCeEEeeccCCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHH
Confidence 47999999999999998654321100000 00111222333333333 356789999999999999
Q ss_pred HHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHH
Q 024971 68 LQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEE 147 (260)
Q Consensus 68 ~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (260)
+.++...|+ +++.|+..+..... ....
T Consensus 163 ~~~a~~~pr-i~Aav~~~~~~~~~----------------------------------------------------~~~~ 189 (259)
T 4ao6_A 163 LPVTASDKR-IKVALLGLMGVEGV----------------------------------------------------NGED 189 (259)
T ss_dssp HHHHHHCTT-EEEEEEESCCTTST----------------------------------------------------THHH
T ss_pred HHHHhcCCc-eEEEEEeccccccc----------------------------------------------------cccc
Confidence 999999885 66665544321100 0000
Q ss_pred HHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC--CCccEEEeCCCCCC
Q 024971 148 LVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD--SVEDFIVLPNVGHC 225 (260)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~ 225 (260)
. .+...+|++|+|+++|++|..+|++....+.+.+ ++.+++++++ +|.
T Consensus 190 ~-----------------------------~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~ 239 (259)
T 4ao6_A 190 L-----------------------------VRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHS 239 (259)
T ss_dssp H-----------------------------HHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTT
T ss_pred h-----------------------------hhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCC
Confidence 0 1123467899999999999999999998877764 4457888886 675
Q ss_pred cchhchhHHHHHHHHhhh
Q 024971 226 PQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 226 ~~~~~p~~~~~~i~~~l~ 243 (260)
..- ..+..+.+.+|++
T Consensus 240 ~~p--~~e~~~~~~~fl~ 255 (259)
T 4ao6_A 240 AVP--TWEMFAGTVDYLD 255 (259)
T ss_dssp CCC--HHHHTHHHHHHHH
T ss_pred CcC--HHHHHHHHHHHHH
Confidence 331 2345556666764
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.68 E-value=2e-15 Score=112.45 Aligned_cols=186 Identities=14% Similarity=0.049 Sum_probs=103.7
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh---hc--CCceEEEEeChhhHHHHHHHhhCccc--
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VV--KDQAFFICNSIGGLVGLQAAVMEPEI-- 77 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~-- 77 (260)
.||.|+++|+|+.+....+. .+++..+.+..+.+. ++ .++++++|||+||.+|+.++.+++++
T Consensus 117 ~g~~V~~~dyr~~p~~~~~~----------~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~ 186 (326)
T 3ga7_A 117 TGCTVIGIDYSLSPQARYPQ----------AIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHI 186 (326)
T ss_dssp HCSEEEEECCCCTTTSCTTH----------HHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTC
T ss_pred cCCEEEEeeCCCCCCCCCCc----------HHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCC
Confidence 39999999999876553322 334443333333332 23 35899999999999999999988875
Q ss_pred ----hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHh
Q 024971 78 ----CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (260)
Q Consensus 78 ----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (260)
+++++++.+...... .. .. ....... ..........+........
T Consensus 187 ~~~~~~~~vl~~~~~~~~~--------~~-~~---~~~~~~~-------~~l~~~~~~~~~~~~~~~~------------ 235 (326)
T 3ga7_A 187 RCGNVIAILLWYGLYGLQD--------SV-SR---RLFGGAW-------DGLTREDLDMYEKAYLRND------------ 235 (326)
T ss_dssp CSSEEEEEEEESCCCSCSC--------CH-HH---HHCCCTT-------TTCCHHHHHHHHHHHCSSG------------
T ss_pred CccCceEEEEeccccccCC--------Ch-hH---hhhcCCC-------CCCCHHHHHHHHHHhCCCC------------
Confidence 888998887642210 00 00 0000000 0000011111111111000
Q ss_pred ccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH--HHHHhhccCCCccEEEeCCCCCCcch---
Q 024971 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQV--- 228 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~--- 228 (260)
.... ... .......+.+...|+++++|+.|.+++.. ..+.+.+....+++++++|++|.+..
T Consensus 236 ---~~~~---------~~~-~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~ 302 (326)
T 3ga7_A 236 ---EDRE---------SPW-YCLFNNDLTRDVPPCFIASAEFDPLIDDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSR 302 (326)
T ss_dssp ---GGGG---------CTT-TSGGGSCCSSCCCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTT
T ss_pred ---CccC---------Ccc-cCCCcchhhcCCCCEEEEecCcCcCHHHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcC
Confidence 0000 000 00001234445679999999999987522 22334444556799999999997643
Q ss_pred --hchhHHHHHHHHhhhh
Q 024971 229 --SLYLSLSSACLHTLSY 244 (260)
Q Consensus 229 --~~p~~~~~~i~~~l~~ 244 (260)
+..+++.+.+.+|++.
T Consensus 303 ~~~~~~~~~~~~~~fl~~ 320 (326)
T 3ga7_A 303 MMTIADDALQDGARFFMA 320 (326)
T ss_dssp TCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 4467888888888864
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-15 Score=109.88 Aligned_cols=85 Identities=11% Similarity=0.097 Sum_probs=59.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCC--------CC------CCCCcc-HHHHHHHHHHHHHhh-c-CCceEEEEeChhhHHH
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRD--------FF------DKPFYT-FETWASQLNDFCKDV-V-KDQAFFICNSIGGLVG 67 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~--------~~------~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~lvGhS~Gg~~a 67 (260)
.|+.|+++|.+|+|.+......- .. ...... .+.+.+++..+++.. . .++++++||||||.+|
T Consensus 74 ~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a 153 (280)
T 3ls2_A 74 LGIAIVAPDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGA 153 (280)
T ss_dssp HTCEEEECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHH
T ss_pred CCeEEEEeCCcccccccccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHH
Confidence 47999999999888664322100 00 001112 334455666666654 2 2689999999999999
Q ss_pred HHHHhhCccchhhceEeccCcc
Q 024971 68 LQAAVMEPEICRGMILLNISLR 89 (260)
Q Consensus 68 ~~~a~~~p~~v~~lvl~~~~~~ 89 (260)
+.++.++|++++++++++|...
T Consensus 154 ~~~a~~~p~~~~~~~~~s~~~~ 175 (280)
T 3ls2_A 154 LMIALKNPQDYVSASAFSPIVN 175 (280)
T ss_dssp HHHHHHSTTTCSCEEEESCCSC
T ss_pred HHHHHhCchhheEEEEecCccC
Confidence 9999999999999999998653
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.5e-16 Score=127.73 Aligned_cols=190 Identities=15% Similarity=0.111 Sum_probs=107.0
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCC-CCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRD-FFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+++||.|+++|+||+|......... ........++++++.+..+++.- ..+++.++|||+||.+++.++.++|++++
T Consensus 480 ~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~ 559 (693)
T 3iuj_A 480 LDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMR 559 (693)
T ss_dssp HHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCS
T ss_pred HHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCcccee
Confidence 3579999999999998764211000 00001223455555555554442 23689999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|+..|....... . . .. ........ +... .........+
T Consensus 560 a~v~~~~~~d~~~~----------~----~-~~---~~~~~~~~--------------~g~p-~~~~~~~~~~------- 599 (693)
T 3iuj_A 560 VALPAVGVLDMLRY----------H----T-FT---AGTGWAYD--------------YGTS-ADSEAMFDYL------- 599 (693)
T ss_dssp EEEEESCCCCTTTG----------G----G-SG---GGGGCHHH--------------HCCT-TSCHHHHHHH-------
T ss_pred EEEecCCcchhhhh----------c----c-CC---CchhHHHH--------------cCCc-cCHHHHHHHH-------
Confidence 99999887532110 0 0 00 00000000 0000 0001100000
Q ss_pred chHHHHHHHHhhhCCCCCCccCCC-CCCC-EEEEecCCCCCCChHHHHHhhccC-------CCccEEEeCCCCCCcch--
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQ-VKCP-VLIAWGDKDPWEPIELGRAYGNFD-------SVEDFIVLPNVGHCPQV-- 228 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~P-~l~i~g~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~-- 228 (260)
... .+...+.+ +++| +|+++|++|..+++.....+.+.+ ..+++++++++||....
T Consensus 600 ------~~~-------sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~ 666 (693)
T 3iuj_A 600 ------KGY-------SPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPV 666 (693)
T ss_dssp ------HHH-------CHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHH
T ss_pred ------Hhc-------CHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccH
Confidence 000 01234555 7888 999999999999988776655432 23578899999998764
Q ss_pred hchhHHHHHHHHhhhhc
Q 024971 229 SLYLSLSSACLHTLSYL 245 (260)
Q Consensus 229 ~~p~~~~~~i~~~l~~~ 245 (260)
++..+..+.+.+||...
T Consensus 667 ~~~~~~~~~~~~fl~~~ 683 (693)
T 3iuj_A 667 AKLIEQSADIYAFTLYE 683 (693)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56667777888888543
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.9e-16 Score=118.76 Aligned_cols=35 Identities=23% Similarity=0.233 Sum_probs=30.5
Q ss_pred CCceEEEEeChhhHHHHHHHhhCccchhhceEeccC
Q 024971 52 KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 52 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
.+++.++|||+||.+++.++...+ +|+++|++++.
T Consensus 218 ~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~ 252 (383)
T 3d59_A 218 REKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAW 252 (383)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred ccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCc
Confidence 347999999999999999988776 59999999874
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-15 Score=122.15 Aligned_cols=188 Identities=17% Similarity=0.084 Sum_probs=109.9
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCC-CCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPR-DFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+++||.|+++|+||+|.+...... .........++++...+..+++.- ..+++.++|+|+||.+++.++.++|++++
T Consensus 505 a~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~ 584 (711)
T 4hvt_A 505 VKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFG 584 (711)
T ss_dssp GGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCS
T ss_pred HHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceE
Confidence 467999999999999876431100 000011223444444444444432 22579999999999999999999999999
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|..+|........ .... . ...... +... ..++..+.+
T Consensus 585 a~V~~~pv~D~~~~~--------------~~~~----~---------~~~~~~-----~G~p--~~~~~~~~l------- 623 (711)
T 4hvt_A 585 AVACEVPILDMIRYK--------------EFGA----G---------HSWVTE-----YGDP--EIPNDLLHI------- 623 (711)
T ss_dssp EEEEESCCCCTTTGG--------------GSTT----G---------GGGHHH-----HCCT--TSHHHHHHH-------
T ss_pred EEEEeCCccchhhhh--------------cccc----c---------hHHHHH-----hCCC--cCHHHHHHH-------
Confidence 999998875321100 0000 0 000000 0000 001111111
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCC--CEEEEecCCCCCCChHHHHHhhccC-----CCccEEEeCCCCCCcch--hc
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKC--PVLIAWGDKDPWEPIELGRAYGNFD-----SVEDFIVLPNVGHCPQV--SL 230 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~--P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~--~~ 230 (260)
... .+...+.++++ |+|+++|++|..+|+.....+.+.+ ..+++++++++||.... ++
T Consensus 624 ------~~~-------SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~ 690 (711)
T 4hvt_A 624 ------KKY-------APLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKE 690 (711)
T ss_dssp ------HHH-------CGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHH
T ss_pred ------HHc-------CHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcch
Confidence 100 11344566776 9999999999999987766544333 45789999999998643 33
Q ss_pred hhHHHHHHHHhhhh
Q 024971 231 YLSLSSACLHTLSY 244 (260)
Q Consensus 231 p~~~~~~i~~~l~~ 244 (260)
.......+.+|+..
T Consensus 691 ~~~~~~~i~~FL~~ 704 (711)
T 4hvt_A 691 SANYFINLYTFFAN 704 (711)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44555566677754
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.7e-15 Score=109.35 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=62.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.|+.|+++|.++++.++.+. .....+.+++++..+++.. +.++++++|||+||.+++.++. +|+++
T Consensus 70 ~~~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~ 141 (263)
T 2uz0_A 70 TNLIVVMPNTSNGWYTDTQY-------GFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRF 141 (263)
T ss_dssp CCCEEEECCCTTSTTSBCTT-------SCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCC
T ss_pred CCeEEEEECCCCCccccCCC-------cccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-Ccccc
Confidence 47888999998888766543 2234577778888888875 2368999999999999999999 99999
Q ss_pred hhceEeccCccc
Q 024971 79 RGMILLNISLRM 90 (260)
Q Consensus 79 ~~lvl~~~~~~~ 90 (260)
+++|++++....
T Consensus 142 ~~~v~~~~~~~~ 153 (263)
T 2uz0_A 142 SHAASFSGALSF 153 (263)
T ss_dssp SEEEEESCCCCS
T ss_pred ceEEEecCCcch
Confidence 999999987643
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.1e-15 Score=108.59 Aligned_cols=76 Identities=11% Similarity=0.016 Sum_probs=63.5
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC---ccchhhc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME---PEICRGM 81 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~---p~~v~~l 81 (260)
+||+|+++|+||||.++. ..+.+++++.+..+++..+.++++||||||||.++..++..+ +++|+++
T Consensus 93 ~Gy~V~a~DlpG~G~~~~----------~~~~~~la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~l 162 (316)
T 3icv_A 93 LGYTPCWISPPPFMLNDT----------QVNTEYMVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRL 162 (316)
T ss_dssp TTCEEEEECCTTTTCSCH----------HHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEE
T ss_pred CCCeEEEecCCCCCCCcH----------HHHHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceE
Confidence 589999999999997643 235677788888888888889999999999999998777775 4899999
Q ss_pred eEeccCccc
Q 024971 82 ILLNISLRM 90 (260)
Q Consensus 82 vl~~~~~~~ 90 (260)
|+++++...
T Consensus 163 V~lapp~~G 171 (316)
T 3icv_A 163 MAFAPDYKG 171 (316)
T ss_dssp EEESCCTTC
T ss_pred EEECCCCCC
Confidence 999997543
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-14 Score=106.07 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCcc
Q 024971 36 FETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLR 89 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 89 (260)
.+.+++++..+++.. ..++++++||||||.+|+.++.++|++++++++++|...
T Consensus 126 ~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 126 YDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILS 181 (283)
T ss_dssp HHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccc
Confidence 344456777777776 336899999999999999999999999999999998653
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-15 Score=98.11 Aligned_cols=65 Identities=20% Similarity=0.307 Sum_probs=59.0
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCcc
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 76 (260)
|+++|+|+++|+||||.|+.+. .. ++++++++.++++.++.++++++||||||.+++.+|.++|.
T Consensus 39 l~~~~~v~~~d~~G~G~s~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 39 LPEGYAFYLLDLPGYGRTEGPR-------MA--PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CCTTSEEEEECCTTSTTCCCCC-------CC--HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HhCCcEEEEECCCCCCCCCCCC-------CC--HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 5677999999999999998765 22 99999999999999999999999999999999999999884
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.6e-15 Score=114.70 Aligned_cols=84 Identities=15% Similarity=0.139 Sum_probs=68.0
Q ss_pred ccEEEEEcCCCCCCCCCCCCCC---CCCCCCccHHHHHHHHHHHHHhhcC-------CceEEEEeChhhHHHHHHHhhCc
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRD---FFDKPFYTFETWASQLNDFCKDVVK-------DQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
++.|+++|+||||.|.+..... .......+.++.++|+..++++++. .+++++||||||.+|+.++.++|
T Consensus 69 ~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP 148 (446)
T 3n2z_B 69 KAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYP 148 (446)
T ss_dssp TEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCT
T ss_pred CCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhh
Confidence 5699999999999997532110 0112345789999999999998854 38999999999999999999999
Q ss_pred cchhhceEeccCcc
Q 024971 76 EICRGMILLNISLR 89 (260)
Q Consensus 76 ~~v~~lvl~~~~~~ 89 (260)
++|.++|+.+++..
T Consensus 149 ~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 149 HMVVGALAASAPIW 162 (446)
T ss_dssp TTCSEEEEETCCTT
T ss_pred ccccEEEEeccchh
Confidence 99999999887654
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.2e-16 Score=120.27 Aligned_cols=77 Identities=9% Similarity=0.060 Sum_probs=66.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----c--CCceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----V--KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+|+|+++|+||+|.|.... ...+++.+++|+.++++.+ + .++++++||||||.+|+.+|.++|+++
T Consensus 99 ~~~~Vi~~D~~g~g~s~~~~-------~~~~~~~~~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v 171 (432)
T 1gpl_A 99 EKVNCICVDWKGGSKAQYSQ-------ASQNIRVVGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLV 171 (432)
T ss_dssp CCEEEEEEECHHHHTSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCS
T ss_pred CCcEEEEEECccccCccchh-------hHhhHHHHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhccccc
Confidence 58999999999999987432 3456788888888888877 4 578999999999999999999999999
Q ss_pred hhceEeccCc
Q 024971 79 RGMILLNISL 88 (260)
Q Consensus 79 ~~lvl~~~~~ 88 (260)
+++++++|..
T Consensus 172 ~~iv~l~pa~ 181 (432)
T 1gpl_A 172 GRITGLDPAE 181 (432)
T ss_dssp SEEEEESCBC
T ss_pred ceeEEecccc
Confidence 9999999864
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=106.36 Aligned_cols=78 Identities=14% Similarity=0.132 Sum_probs=54.7
Q ss_pred CccEEEEEcCC------------CC--CCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHH
Q 024971 5 KSHRVYSIDLI------------GY--GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGL 68 (260)
Q Consensus 5 ~~~~v~~~D~~------------G~--G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~ 68 (260)
.||.|+++|+| |+ |.|..+.+ .....++++.+.+..+.+.. ..++++|+||||||.+++
T Consensus 81 ~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~ 155 (304)
T 3d0k_A 81 HKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPRH-----VDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVH 155 (304)
T ss_dssp HTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCBCC-----GGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHH
T ss_pred CCcEEEEeCCccccCCCccccccCccccccCCCCc-----ccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHH
Confidence 58999999999 66 66654321 11233444433333333332 356899999999999999
Q ss_pred HHHhhCcc-chhhceEeccC
Q 024971 69 QAAVMEPE-ICRGMILLNIS 87 (260)
Q Consensus 69 ~~a~~~p~-~v~~lvl~~~~ 87 (260)
.++.++|+ +++++|+.+++
T Consensus 156 ~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 156 RLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp HHHHHSCSTTCSEEEEESCS
T ss_pred HHHHHCCCCceEEEEEecCc
Confidence 99999995 78999988754
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=110.85 Aligned_cols=80 Identities=13% Similarity=-0.030 Sum_probs=53.7
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC---CceEEEEeChhhHHHHHHHhhCc----
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIGGLVGLQAAVMEP---- 75 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p---- 75 (260)
|++||.|+++|++|+|.+-... ...-....+.+.+..+..+. .++.++|||+||..++.+|...|
T Consensus 152 l~~G~~Vv~~Dy~G~G~~y~~~--------~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yap 223 (462)
T 3guu_A 152 LQQGYYVVSSDHEGFKAAFIAG--------YEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAP 223 (462)
T ss_dssp HHTTCEEEEECTTTTTTCTTCH--------HHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCT
T ss_pred HhCCCEEEEecCCCCCCcccCC--------cchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcC
Confidence 6789999999999999742211 11112223333333333232 68999999999999998887654
Q ss_pred c-chhhceEeccCccc
Q 024971 76 E-ICRGMILLNISLRM 90 (260)
Q Consensus 76 ~-~v~~lvl~~~~~~~ 90 (260)
+ .+.+.+..+++...
T Consensus 224 el~~~g~~~~~~p~dl 239 (462)
T 3guu_A 224 ELNIVGASHGGTPVSA 239 (462)
T ss_dssp TSEEEEEEEESCCCBH
T ss_pred ccceEEEEEecCCCCH
Confidence 2 48888888887644
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=3.8e-14 Score=102.62 Aligned_cols=77 Identities=8% Similarity=-0.043 Sum_probs=55.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh-hcC----CceEEEEeChhhHHHHHHHhhCccchh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD-VVK----DQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
.+|.|+++|.+|++.+.... .....++.++++..+++. ++. ++++++|||+||.+++.++.++|++++
T Consensus 99 ~~~~vv~~d~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 171 (268)
T 1jjf_A 99 KPLIIVTPNTNAAGPGIADG-------YENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFA 171 (268)
T ss_dssp CCCEEEEECCCCCCTTCSCH-------HHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCS
T ss_pred CCEEEEEeCCCCCCcccccc-------HHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhh
Confidence 46999999999987642110 001122335555555553 333 589999999999999999999999999
Q ss_pred hceEeccCc
Q 024971 80 GMILLNISL 88 (260)
Q Consensus 80 ~lvl~~~~~ 88 (260)
+++++++..
T Consensus 172 ~~v~~s~~~ 180 (268)
T 1jjf_A 172 YIGPISAAP 180 (268)
T ss_dssp EEEEESCCT
T ss_pred heEEeCCCC
Confidence 999999864
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.55 E-value=1.6e-14 Score=106.42 Aligned_cols=75 Identities=19% Similarity=0.283 Sum_probs=68.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
+||+|+++|+||+|.|+.+. .+.+++++++.++++.++.++++++||||||.++..++.++|++|+++|++
T Consensus 40 ~G~~V~~~d~~g~g~s~~~~---------~~~~~l~~~i~~~l~~~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i 110 (320)
T 1ys1_X 40 RGATVYVANLSGFQSDDGPN---------GRGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTI 110 (320)
T ss_dssp TTCCEEECCCCSSCCSSSTT---------SHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCCCCCCCC---------CCHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEE
Confidence 58999999999999986532 578999999999999999899999999999999999999999999999999
Q ss_pred ccCc
Q 024971 85 NISL 88 (260)
Q Consensus 85 ~~~~ 88 (260)
+++.
T Consensus 111 ~~p~ 114 (320)
T 1ys1_X 111 GTPH 114 (320)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 9864
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-15 Score=114.06 Aligned_cols=55 Identities=16% Similarity=0.194 Sum_probs=48.4
Q ss_pred ccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc---cchhhceEeccCc
Q 024971 34 YTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP---EICRGMILLNISL 88 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~ 88 (260)
.+.+++++++..++++++.++++++||||||.+++.++.++| ++|+++|+++++.
T Consensus 109 ~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 109 ETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred hhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 356677778888888888899999999999999999999998 4899999999863
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.6e-15 Score=114.83 Aligned_cols=77 Identities=9% Similarity=0.043 Sum_probs=67.4
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----c--CCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----V--KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+|+|+++|+||+|.|..+. ...+++.+++++.++++.+ + .++++|+||||||.+|..+|.++|++|+
T Consensus 100 ~~~Vi~~D~~g~G~S~~~~-------~~~~~~~~~~dl~~~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~ 172 (452)
T 1w52_X 100 TTNCISVDWSSGAKAEYTQ-------AVQNIRIVGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVG 172 (452)
T ss_dssp CCEEEEEECHHHHTSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSS
T ss_pred CCEEEEEecccccccccHH-------HHHhHHHHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhccccee
Confidence 8999999999999997432 3456788889999998888 5 6799999999999999999999999999
Q ss_pred hceEeccCcc
Q 024971 80 GMILLNISLR 89 (260)
Q Consensus 80 ~lvl~~~~~~ 89 (260)
++++++|+..
T Consensus 173 ~iv~ldpa~p 182 (452)
T 1w52_X 173 RVTGLDPAEP 182 (452)
T ss_dssp EEEEESCBCT
T ss_pred eEEecccccc
Confidence 9999998753
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.8e-15 Score=114.67 Aligned_cols=78 Identities=10% Similarity=0.026 Sum_probs=67.7
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cC--CceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VK--DQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+|+|+++|+||+|.|..+. ...++..+++|+.++++.+ +. ++++|+||||||.+|+.+|.++|++|
T Consensus 99 ~~~~Vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v 171 (452)
T 1bu8_A 99 EKVNCICVDWRRGSRTEYTQ-------ASYNTRVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHV 171 (452)
T ss_dssp CCEEEEEEECHHHHSSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCS
T ss_pred CCCEEEEEechhcccCchhH-------hHhhHHHHHHHHHHHHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhccccc
Confidence 38999999999999997432 3456778899999999888 53 78999999999999999999999999
Q ss_pred hhceEeccCcc
Q 024971 79 RGMILLNISLR 89 (260)
Q Consensus 79 ~~lvl~~~~~~ 89 (260)
.++++++|+..
T Consensus 172 ~~iv~ldpa~p 182 (452)
T 1bu8_A 172 GRITGLDPAEP 182 (452)
T ss_dssp SEEEEESCBCT
T ss_pred ceEEEecCCcc
Confidence 99999998753
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.50 E-value=9.9e-13 Score=93.44 Aligned_cols=124 Identities=13% Similarity=0.186 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHhh-----cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhh
Q 024971 36 FETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNL 110 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (260)
+...++.+..+++.. ..++++++|+|+||.+++.++.++|+++.+++.+++..... .
T Consensus 110 i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~-------------~----- 171 (246)
T 4f21_A 110 INSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAW-------------D----- 171 (246)
T ss_dssp CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTH-------------H-----
T ss_pred HHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcc-------------c-----
Confidence 444455555555432 34589999999999999999999999999999998753110 0
Q ss_pred hhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEE
Q 024971 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLI 190 (260)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 190 (260)
.. . . ...-...++|+++
T Consensus 172 ------------------------------------~~----~---------------------~--~~~~~~~~~Pvl~ 188 (246)
T 4f21_A 172 ------------------------------------NF----K---------------------G--KITSINKGLPILV 188 (246)
T ss_dssp ------------------------------------HH----S---------------------T--TCCGGGTTCCEEE
T ss_pred ------------------------------------cc----c---------------------c--cccccccCCchhh
Confidence 00 0 0 0000112589999
Q ss_pred EecCCCCCCChHHHHHhhc----cCCCccEEEeCCCCCCcchhchhHHHHHHHHhhhh
Q 024971 191 AWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 191 i~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
++|++|.++|.+..+...+ ..-++++..++|.||.+.. +++ +.+.+||++
T Consensus 189 ~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~---~~l-~~~~~fL~k 242 (246)
T 4f21_A 189 CHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVCM---EEI-KDISNFIAK 242 (246)
T ss_dssp EEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCCH---HHH-HHHHHHHHH
T ss_pred cccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccCH---HHH-HHHHHHHHH
Confidence 9999999999987666443 3345788999999998753 333 446677753
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.6e-13 Score=108.31 Aligned_cols=78 Identities=15% Similarity=-0.091 Sum_probs=63.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-----CCceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
++||.|+++|+||+|.|..... . +...++|+.++++.+. ..++.++||||||.+++.+|.++|+.+
T Consensus 64 ~~Gy~vv~~D~RG~G~S~g~~~-------~--~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l 134 (587)
T 3i2k_A 64 RDGYAVVIQDTRGLFASEGEFV-------P--HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGL 134 (587)
T ss_dssp HTTCEEEEEECTTSTTCCSCCC-------T--TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTE
T ss_pred HCCCEEEEEcCCCCCCCCCccc-------c--ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCcc
Confidence 4799999999999999987552 1 2345667777666653 248999999999999999999999999
Q ss_pred hhceEeccC-ccc
Q 024971 79 RGMILLNIS-LRM 90 (260)
Q Consensus 79 ~~lvl~~~~-~~~ 90 (260)
+++|.+++. ...
T Consensus 135 ~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 135 KAIAPSMASADLY 147 (587)
T ss_dssp EEBCEESCCSCTC
T ss_pred EEEEEeCCccccc
Confidence 999999987 543
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.48 E-value=8.6e-15 Score=112.18 Aligned_cols=79 Identities=9% Similarity=0.010 Sum_probs=66.7
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
..+|+|+++|+||||.|..+. ..++.+.+++++.++++.+ +.++++|+||||||.+|..+|.++|++
T Consensus 97 ~~~~~VI~vD~~g~g~s~y~~-------~~~~~~~v~~~la~ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~ 169 (449)
T 1hpl_A 97 VESVNCICVDWKSGSRTAYSQ-------ASQNVRIVGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGA 169 (449)
T ss_dssp HCCEEEEEEECHHHHSSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTC
T ss_pred cCCeEEEEEeCCcccCCccHH-------HHHHHHHHHHHHHHHHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchh
Confidence 358999999999999986322 2356777888888888776 367999999999999999999999999
Q ss_pred hhhceEeccCcc
Q 024971 78 CRGMILLNISLR 89 (260)
Q Consensus 78 v~~lvl~~~~~~ 89 (260)
|.++++++|+..
T Consensus 170 v~~iv~Ldpa~p 181 (449)
T 1hpl_A 170 VGRITGLDPAEP 181 (449)
T ss_dssp SSEEEEESCBCT
T ss_pred cceeeccCcccc
Confidence 999999998754
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.47 E-value=6.3e-14 Score=102.01 Aligned_cols=72 Identities=15% Similarity=0.149 Sum_probs=66.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
+||+|+++|+||+|.|+ .+.+++++++.++++.++.++++++||||||.++..++.++|++|+++|++
T Consensus 38 ~G~~v~~~d~~g~g~s~------------~~~~~~~~~i~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i 105 (285)
T 1ex9_A 38 DGAQVYVTEVSQLDTSE------------VRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSV 105 (285)
T ss_dssp TTCCEEEECCCSSSCHH------------HHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEEeCCCCCCch------------hhHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEE
Confidence 58999999999999774 367899999999999999899999999999999999999999999999999
Q ss_pred ccCc
Q 024971 85 NISL 88 (260)
Q Consensus 85 ~~~~ 88 (260)
+++.
T Consensus 106 ~~p~ 109 (285)
T 1ex9_A 106 GAPH 109 (285)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 9864
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=9.5e-13 Score=95.48 Aligned_cols=104 Identities=24% Similarity=0.199 Sum_probs=75.9
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHH
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRN 132 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (260)
++++++|+|+||.+++.++.++|+++.++|.+++.... +
T Consensus 157 ~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~------------------------------------~----- 195 (285)
T 4fhz_A 157 EALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA------------------------------------P----- 195 (285)
T ss_dssp GGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC------------------------------------H-----
T ss_pred cceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC------------------------------------c-----
Confidence 57999999999999999999999999999988864210 0
Q ss_pred HHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhh----
Q 024971 133 ILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG---- 208 (260)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~---- 208 (260)
+... .....++|+++++|++|.++|.+..+.+.
T Consensus 196 --------------~~~~-----------------------------~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~ 232 (285)
T 4fhz_A 196 --------------ERLA-----------------------------EEARSKPPVLLVHGDADPVVPFADMSLAGEALA 232 (285)
T ss_dssp --------------HHHH-----------------------------HHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHH
T ss_pred --------------hhhh-----------------------------hhhhhcCcccceeeCCCCCcCHHHHHHHHHHHH
Confidence 0000 00123579999999999999998776644
Q ss_pred ccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhhh
Q 024971 209 NFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 209 ~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
+...++++++++|.||.+. ++++ +.+.+||++
T Consensus 233 ~~g~~~~~~~y~g~gH~i~---~~~l-~~~~~fL~~ 264 (285)
T 4fhz_A 233 EAGFTTYGHVMKGTGHGIA---PDGL-SVALAFLKE 264 (285)
T ss_dssp HTTCCEEEEEETTCCSSCC---HHHH-HHHHHHHHH
T ss_pred HCCCCEEEEEECCCCCCCC---HHHH-HHHHHHHHH
Confidence 3344678999999999864 3333 456677754
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.2e-14 Score=109.96 Aligned_cols=77 Identities=13% Similarity=0.067 Sum_probs=65.7
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+|+|+++|+||+|.|..+. ..++++.+++++.++++.+ +.++++||||||||.+|..+|.++|+ |
T Consensus 99 ~~~~VI~vD~~g~g~s~y~~-------~~~~~~~~a~~l~~ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v 170 (450)
T 1rp1_A 99 EEVNCICVDWKKGSQTSYTQ-------AANNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-L 170 (450)
T ss_dssp CCEEEEEEECHHHHSSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-C
T ss_pred CCeEEEEEeCccccCCcchH-------HHHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-c
Confidence 37999999999999875322 2457788888999888877 36799999999999999999999999 9
Q ss_pred hhceEeccCcc
Q 024971 79 RGMILLNISLR 89 (260)
Q Consensus 79 ~~lvl~~~~~~ 89 (260)
.++++++|...
T Consensus 171 ~~iv~Ldpa~p 181 (450)
T 1rp1_A 171 GRITGLDPVEA 181 (450)
T ss_dssp CEEEEESCCCT
T ss_pred ccccccCcccc
Confidence 99999998764
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.44 E-value=7.8e-13 Score=106.24 Aligned_cols=86 Identities=13% Similarity=-0.115 Sum_probs=60.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccH--HHHHHHHHHHHHhhcC------CceEEEEeChhhHHHHHHHhhCc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTF--ETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
++||.|+++|.||+|.|.............+.. ...++|+.++++.+.. .++.++||||||.+++.+|..+|
T Consensus 87 ~~Gy~Vv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~ 166 (615)
T 1mpx_A 87 EGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPH 166 (615)
T ss_dssp HTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCC
T ss_pred hCCeEEEEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCC
Confidence 469999999999999998754210000000110 0345555555554422 38999999999999999999889
Q ss_pred cchhhceEeccCcc
Q 024971 76 EICRGMILLNISLR 89 (260)
Q Consensus 76 ~~v~~lvl~~~~~~ 89 (260)
++++++|.+++...
T Consensus 167 ~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 167 PALKVAVPESPMID 180 (615)
T ss_dssp TTEEEEEEESCCCC
T ss_pred CceEEEEecCCccc
Confidence 99999999998765
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.44 E-value=6.5e-14 Score=103.64 Aligned_cols=83 Identities=11% Similarity=0.079 Sum_probs=68.9
Q ss_pred CccE---EEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC--ccchh
Q 024971 5 KSHR---VYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME--PEICR 79 (260)
Q Consensus 5 ~~~~---v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~ 79 (260)
+||+ |+++|+||+|.|..+.... ......+++++++.+++++++.++++||||||||.+++.++.++ |++|+
T Consensus 80 ~Gy~~~~V~~~D~~g~G~S~~~~~~~---~~~~~~~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~ 156 (342)
T 2x5x_A 80 RGYNDCEIFGVTYLSSSEQGSAQYNY---HSSTKYAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVR 156 (342)
T ss_dssp TTCCTTSEEEECCSCHHHHTCGGGCC---BCHHHHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEE
T ss_pred CCCCCCeEEEEeCCCCCccCCccccC---CHHHHHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhc
Confidence 4787 9999999999886542000 13456788888888888888889999999999999999999998 99999
Q ss_pred hceEeccCccc
Q 024971 80 GMILLNISLRM 90 (260)
Q Consensus 80 ~lvl~~~~~~~ 90 (260)
++|+++++...
T Consensus 157 ~lVlla~p~~G 167 (342)
T 2x5x_A 157 KFINLAGGIRG 167 (342)
T ss_dssp EEEEESCCTTC
T ss_pred EEEEECCCccc
Confidence 99999997654
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-12 Score=105.48 Aligned_cols=87 Identities=9% Similarity=-0.177 Sum_probs=61.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccH--HHHHHHHHHHHHhhcC------CceEEEEeChhhHHHHHHHhhCc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTF--ETWASQLNDFCKDVVK------DQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
++||.|+.+|.||+|.|.............+.- ...++|+.++++.+.. .++.++|+|+||.+++.+|.+.|
T Consensus 100 ~~GyaVv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~ 179 (652)
T 2b9v_A 100 EGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPH 179 (652)
T ss_dssp HTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCC
T ss_pred hCCCEEEEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCC
Confidence 479999999999999998754211000000110 1345555555554421 37999999999999999999899
Q ss_pred cchhhceEeccCccc
Q 024971 76 EICRGMILLNISLRM 90 (260)
Q Consensus 76 ~~v~~lvl~~~~~~~ 90 (260)
++++++|.+++....
T Consensus 180 ~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 180 PALKVAAPESPMVDG 194 (652)
T ss_dssp TTEEEEEEEEECCCT
T ss_pred CceEEEEeccccccc
Confidence 999999999987643
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.6e-12 Score=93.51 Aligned_cols=85 Identities=16% Similarity=0.013 Sum_probs=61.4
Q ss_pred CCccEEEEEcCCCC-CCCCCCCCCC-CCCCCCccHHHH-HHHHHHHHHh-hcCC--ceEEEEeChhhHHHHHHHhhCccc
Q 024971 4 AKSHRVYSIDLIGY-GYSDKPNPRD-FFDKPFYTFETW-ASQLNDFCKD-VVKD--QAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~-G~S~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~-~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
..++.|+++|.+|. +.++...+.. .......+++++ ++++..++++ ++.+ +++++||||||.+|+.++.++|++
T Consensus 59 ~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~ 138 (280)
T 1dqz_A 59 QSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQ 138 (280)
T ss_dssp TSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTT
T ss_pred cCCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCch
Confidence 35799999998764 2232111100 000013456654 5888888887 6664 899999999999999999999999
Q ss_pred hhhceEeccCc
Q 024971 78 CRGMILLNISL 88 (260)
Q Consensus 78 v~~lvl~~~~~ 88 (260)
+++++++++..
T Consensus 139 ~~~~v~~sg~~ 149 (280)
T 1dqz_A 139 FPYAASLSGFL 149 (280)
T ss_dssp CSEEEEESCCC
T ss_pred heEEEEecCcc
Confidence 99999999875
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.9e-12 Score=101.16 Aligned_cols=79 Identities=14% Similarity=-0.013 Sum_probs=63.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-----CceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-----DQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
++||.|+++|.||+|.|.+... .+. ....+|+.++++.+.. .++.++|||+||.+++.+|+..|+.+
T Consensus 115 ~~Gy~vv~~D~RG~G~S~G~~~-------~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l 186 (560)
T 3iii_A 115 PNDYVVVKVALRGSDKSKGVLS-------PWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHL 186 (560)
T ss_dssp GGTCEEEEEECTTSTTCCSCBC-------TTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTE
T ss_pred hCCCEEEEEcCCCCCCCCCccc-------cCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCce
Confidence 4699999999999999987541 121 3556676666666532 47999999999999999999999999
Q ss_pred hhceEeccCccc
Q 024971 79 RGMILLNISLRM 90 (260)
Q Consensus 79 ~~lvl~~~~~~~ 90 (260)
+++|..++....
T Consensus 187 ~aiv~~~~~~d~ 198 (560)
T 3iii_A 187 KAMIPWEGLNDM 198 (560)
T ss_dssp EEEEEESCCCBH
T ss_pred EEEEecCCcccc
Confidence 999999987654
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.5e-11 Score=91.13 Aligned_cols=69 Identities=14% Similarity=0.130 Sum_probs=56.2
Q ss_pred cEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCc---cc---hh
Q 024971 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEP---EI---CR 79 (260)
Q Consensus 7 ~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p---~~---v~ 79 (260)
+.|+++|+|+ .. ...+++++++++.+.++.+.. ++++++||||||.+|+.+|.+.+ +. ++
T Consensus 71 ~~v~~~~~~~----~~---------~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~ 137 (316)
T 2px6_A 71 IPTYGLQCTR----AA---------PLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 137 (316)
T ss_dssp SCEEEECCCT----TS---------CTTCHHHHHHHHHHHHTTTCSSCCCEEEEETHHHHHHHHHHHHHHHHC---CCCC
T ss_pred CCEEEEECCC----CC---------CcCCHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHHHHHHcCCcccccc
Confidence 8899999992 11 235899999999999998864 78999999999999999998765 34 88
Q ss_pred hceEeccCc
Q 024971 80 GMILLNISL 88 (260)
Q Consensus 80 ~lvl~~~~~ 88 (260)
+++++++.+
T Consensus 138 ~l~li~~~~ 146 (316)
T 2px6_A 138 SLFLFDGSP 146 (316)
T ss_dssp EEEEESCSS
T ss_pred eEEEEcCCc
Confidence 999988764
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.36 E-value=2.9e-12 Score=93.20 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=59.0
Q ss_pred CccEEEEEcCCCCC-CCCCCCCCCCCCCCCccH-HHHHHHHHHHHHh-hcCC--ceEEEEeChhhHHHHHHHhhCccchh
Q 024971 5 KSHRVYSIDLIGYG-YSDKPNPRDFFDKPFYTF-ETWASQLNDFCKD-VVKD--QAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 5 ~~~~v~~~D~~G~G-~S~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
.++.|+++|.++.+ .++.... ....+ +.+++++..++++ ++.+ +++++||||||.+|+.+|.++|++++
T Consensus 65 ~~~~vv~pd~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~ 138 (280)
T 1r88_A 65 KGISVVAPAGGAYSMYTNWEQD------GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFG 138 (280)
T ss_dssp SSSEEEEECCCTTSTTSBCSSC------TTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEE
T ss_pred CCeEEEEECCCCCCccCCCCCC------CCCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCcccee
Confidence 57999999997642 2221111 11234 3456788888887 6654 89999999999999999999999999
Q ss_pred hceEeccCc
Q 024971 80 GMILLNISL 88 (260)
Q Consensus 80 ~lvl~~~~~ 88 (260)
+++++++..
T Consensus 139 ~~v~~sg~~ 147 (280)
T 1r88_A 139 FAGSMSGFL 147 (280)
T ss_dssp EEEEESCCC
T ss_pred EEEEECCcc
Confidence 999999874
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.35 E-value=8.2e-12 Score=91.95 Aligned_cols=84 Identities=18% Similarity=0.037 Sum_probs=59.6
Q ss_pred CccEEEEEcCCCC-CCCCCCCCCC-CCCCCCccHHHH-HHHHHHHHHh-hcCC--ceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGY-GYSDKPNPRD-FFDKPFYTFETW-ASQLNDFCKD-VVKD--QAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~-G~S~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~-~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.++.|+++|.++. +.++...+.. ........++++ ++++..++++ ++.+ +++|+||||||.+|+.++.++|+++
T Consensus 65 ~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~ 144 (304)
T 1sfr_A 65 SGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQF 144 (304)
T ss_dssp SSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred CCeEEEEECCCCCccccccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccce
Confidence 5799999998764 2222111000 000013456665 4788888877 5654 8999999999999999999999999
Q ss_pred hhceEeccCc
Q 024971 79 RGMILLNISL 88 (260)
Q Consensus 79 ~~lvl~~~~~ 88 (260)
++++++++..
T Consensus 145 ~~~v~~sg~~ 154 (304)
T 1sfr_A 145 VYAGAMSGLL 154 (304)
T ss_dssp EEEEEESCCS
T ss_pred eEEEEECCcc
Confidence 9999999874
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.2e-14 Score=107.03 Aligned_cols=86 Identities=13% Similarity=0.172 Sum_probs=61.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCC----------CCC--CCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHH
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPR----------DFF--DKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQA 70 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~ 70 (260)
++||+|+++|+||||.|...... ..+ ....++++++++++.+++++++. ++++||||||||.++..+
T Consensus 89 ~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~l 168 (431)
T 2hih_A 89 KAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLL 168 (431)
T ss_dssp HTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHH
T ss_pred hCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHH
Confidence 35899999999999988531100 000 00112344455566667777764 799999999999999998
Q ss_pred Hhh--------------------------CccchhhceEeccCcc
Q 024971 71 AVM--------------------------EPEICRGMILLNISLR 89 (260)
Q Consensus 71 a~~--------------------------~p~~v~~lvl~~~~~~ 89 (260)
|.. +|++|.++|+++++..
T Consensus 169 A~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~~ 213 (431)
T 2hih_A 169 EHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPHN 213 (431)
T ss_dssp HHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCTT
T ss_pred HHHhccccccchhhccccccccccccccCcccceeEEEEECCCCC
Confidence 876 6889999999998653
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=7.3e-10 Score=81.17 Aligned_cols=73 Identities=12% Similarity=0.095 Sum_probs=54.5
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-c--------------CCceEEEEeChhhHHHHH
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-V--------------KDQAFFICNSIGGLVGLQ 69 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~lvGhS~Gg~~a~~ 69 (260)
.++.|+++|.+|- +... ..+ .+.+++++...++.. . ..++.++|+||||.+++.
T Consensus 106 ~~~ivv~pd~~~~--~~~~--------~~~-~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~ 174 (297)
T 1gkl_A 106 EPLIVVTPTFNGG--NCTA--------QNF-YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWY 174 (297)
T ss_dssp CCEEEEECCSCST--TCCT--------TTH-HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHH
T ss_pred CCEEEEEecCcCC--ccch--------HHH-HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHH
Confidence 3689999998752 2211 112 345567777777764 2 235899999999999999
Q ss_pred HHhhCccchhhceEeccCc
Q 024971 70 AAVMEPEICRGMILLNISL 88 (260)
Q Consensus 70 ~a~~~p~~v~~lvl~~~~~ 88 (260)
++.++|+++++++++++..
T Consensus 175 ~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 175 VMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp HHHHHTTTCCEEEEESCCC
T ss_pred HHHhCchhhheeeEecccc
Confidence 9999999999999999864
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=6e-10 Score=81.73 Aligned_cols=35 Identities=14% Similarity=0.166 Sum_probs=31.6
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchh-hceEeccC
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICR-GMILLNIS 87 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~-~lvl~~~~ 87 (260)
++++|.|+|+||.+++.++..+|+.++ +++++++.
T Consensus 11 ~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~ 46 (318)
T 2d81_A 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGG 46 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCC
T ss_pred ceEEEEEECHHHHHHHHHHHHCchhhhccceEEecc
Confidence 579999999999999999999999998 88777764
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.9e-10 Score=85.43 Aligned_cols=74 Identities=12% Similarity=0.085 Sum_probs=53.5
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHH------------------------HHHHh-hcCCceEEEE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN------------------------DFCKD-VVKDQAFFIC 59 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~-~~~~~~~lvG 59 (260)
+||+|+++|+||+|.|... ..++...+. +++++ .+.++++|||
T Consensus 43 ~G~~Via~Dl~g~G~s~~~------------a~~l~~~i~~~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVG 110 (387)
T 2dsn_A 43 NGYRTYTLAVGPLSSNWDR------------ACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIA 110 (387)
T ss_dssp TTCCEEEECCCSSBCHHHH------------HHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEE
T ss_pred CCCEEEEecCCCCCCcccc------------HHHHHHHHHhhhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEE
Confidence 5899999999999977421 112222221 12223 4678999999
Q ss_pred eChhhHHHHHHHhh-------------------Cc------cchhhceEeccCccc
Q 024971 60 NSIGGLVGLQAAVM-------------------EP------EICRGMILLNISLRM 90 (260)
Q Consensus 60 hS~Gg~~a~~~a~~-------------------~p------~~v~~lvl~~~~~~~ 90 (260)
|||||.++..++.+ +| ++|.++|+++++...
T Consensus 111 HSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~~G 166 (387)
T 2dsn_A 111 HSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPHDG 166 (387)
T ss_dssp ETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCTTC
T ss_pred ECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCCCC
Confidence 99999999999972 36 789999999986543
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.5e-10 Score=85.12 Aligned_cols=82 Identities=11% Similarity=0.009 Sum_probs=57.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHH---------------HHHHHHHHhhc------CCceEEEEeCh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA---------------SQLNDFCKDVV------KDQAFFICNSI 62 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~------~~~~~lvGhS~ 62 (260)
++||.|+++|+||+|.|........ ...+....++ .|+..+++.+. .+++.++||||
T Consensus 157 ~~G~~Vl~~D~rg~G~s~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~ 234 (391)
T 3g8y_A 157 KEGYVAVAVDNAAAGEASDLECYDK--GWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSL 234 (391)
T ss_dssp TTTCEEEECCCTTSGGGCSSGGGTT--TTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGG
T ss_pred HCCCEEEEecCCCccccCCcccccc--cccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEECh
Confidence 4699999999999999976531100 0113333332 56666666652 34789999999
Q ss_pred hhHHHHHHHhhCccchhhceEeccCc
Q 024971 63 GGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 63 Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
||.+++.+|... ++|+++|++++..
T Consensus 235 GG~~al~~a~~~-~~i~a~v~~~~~~ 259 (391)
T 3g8y_A 235 GTEPMMVLGVLD-KDIYAFVYNDFLC 259 (391)
T ss_dssp GHHHHHHHHHHC-TTCCEEEEESCBC
T ss_pred hHHHHHHHHHcC-CceeEEEEccCCC
Confidence 999999988765 4799998887653
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.9e-09 Score=82.23 Aligned_cols=75 Identities=21% Similarity=0.130 Sum_probs=52.9
Q ss_pred cEEEEEcCCCCC-CCCCCCCCCCCCCCCccH-HHHHHHHHHHHHhh-c----CCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 7 HRVYSIDLIGYG-YSDKPNPRDFFDKPFYTF-ETWASQLNDFCKDV-V----KDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 7 ~~v~~~D~~G~G-~S~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+.|+++|.+|++ ++.... ....+ +.+++++...++.. . .++++++||||||.+++.++.++|++++
T Consensus 230 ~iVV~~d~~~~~~r~~~~~-------~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~ 302 (403)
T 3c8d_A 230 AVYVLIDAIDTTHRAHELP-------CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFG 302 (403)
T ss_dssp CEEEEECCCSHHHHHHHSS-------SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCC
T ss_pred eEEEEECCCCCccccccCC-------ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhc
Confidence 459999998742 221111 11122 33346666666653 2 2579999999999999999999999999
Q ss_pred hceEeccCc
Q 024971 80 GMILLNISL 88 (260)
Q Consensus 80 ~lvl~~~~~ 88 (260)
+++++++..
T Consensus 303 ~~~~~sg~~ 311 (403)
T 3c8d_A 303 CVLSQSGSY 311 (403)
T ss_dssp EEEEESCCT
T ss_pred EEEEecccc
Confidence 999999864
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.97 E-value=7.7e-10 Score=80.20 Aligned_cols=47 Identities=13% Similarity=0.195 Sum_probs=38.6
Q ss_pred HHHHHHHHh-hcC--CceEEEEeChhhHHHHHHHhhCccchhhceEeccC
Q 024971 41 SQLNDFCKD-VVK--DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 41 ~~~~~~~~~-~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
+++...++. ++. +++.++||||||.+++.++.++|+.++++++++|.
T Consensus 137 ~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~ 186 (275)
T 2qm0_A 137 EELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPS 186 (275)
T ss_dssp HTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred HHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCce
Confidence 455555554 232 57999999999999999999999999999999886
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.89 E-value=4.2e-09 Score=80.43 Aligned_cols=83 Identities=7% Similarity=-0.051 Sum_probs=55.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCC-------------CCccHHHHHHHHHHHHHhhc------CCceEEEEeChhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDK-------------PFYTFETWASQLNDFCKDVV------KDQAFFICNSIGG 64 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~------~~~~~lvGhS~Gg 64 (260)
++||.|+++|+||+|.|........... ........+.|+...++.+. .+++.++||||||
T Consensus 162 ~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG 241 (398)
T 3nuz_A 162 KEGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGT 241 (398)
T ss_dssp TTTCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGH
T ss_pred HCCCEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhH
Confidence 4699999999999999975431000000 00111223356666666653 2478999999999
Q ss_pred HHHHHHHhhCccchhhceEeccC
Q 024971 65 LVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 65 ~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
.+++.+++..+ +|+++|.+++.
T Consensus 242 ~~a~~~aa~~~-~i~a~v~~~~~ 263 (398)
T 3nuz_A 242 EPMMVLGTLDT-SIYAFVYNDFL 263 (398)
T ss_dssp HHHHHHHHHCT-TCCEEEEESCB
T ss_pred HHHHHHHhcCC-cEEEEEEeccc
Confidence 99998888764 68888877653
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.76 E-value=3.7e-08 Score=72.98 Aligned_cols=48 Identities=21% Similarity=0.319 Sum_probs=37.0
Q ss_pred HHHHHHHHhh-cC-CceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 41 SQLNDFCKDV-VK-DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 41 ~~~~~~~~~~-~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
+++...++.. .. ....++||||||..++.++.++|+.+.+++.++|..
T Consensus 123 ~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~ 172 (331)
T 3gff_A 123 KELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSL 172 (331)
T ss_dssp HTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCT
T ss_pred HHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchh
Confidence 4444455443 21 234788999999999999999999999999999863
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=3.6e-07 Score=66.24 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=31.4
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchhhceEeccC
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
+++.++||||||.+++.++.+ |+.++++++++|.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 368999999999999999999 9999999999875
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.57 E-value=4.6e-07 Score=79.36 Aligned_cols=174 Identities=14% Similarity=0.051 Sum_probs=90.1
Q ss_pred cHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCc---cchhhceEeccCccccccCCCCCCCcchhHHHhhh
Q 024971 35 TFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEP---EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNL 110 (260)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (260)
+.+++++...+.+..+.. .++.++|||+||.+|..+|.+.. +.+..++++++....... ........
T Consensus 1093 ~~~~~~~~~~~~i~~~~~~gp~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~---~~~~~~~~------ 1163 (1304)
T 2vsq_A 1093 EEEDRLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVS---DLDGRTVE------ 1163 (1304)
T ss_dssp CSTTHHHHHHHHHHHHCCSSCEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC--------CHH------
T ss_pred CHHHHHHHHHHHHHHhCCCCCeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCccccccc---ccccccch------
Confidence 344556666666666643 58999999999999999997654 347888888875432100 00000000
Q ss_pred hhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEE
Q 024971 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLI 190 (260)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 190 (260)
.....+. ....... ..............+...+....... .-..+++|+++
T Consensus 1164 -----------------~~~~~l~-~~~~~~~--------~~~~~~l~~~~l~~~~~~~~~~~~~~---~~~~~~~pv~l 1214 (1304)
T 2vsq_A 1164 -----------------SDVEALM-NVNRDNE--------ALNSEAVKHGLKQKTHAFYSYYVNLI---STGQVKADIDL 1214 (1304)
T ss_dssp -----------------HHHHHHH-TTCC---------------CTTTGGGHHHHHHHHHHHHC--------CBSSEEEE
T ss_pred -----------------hhHHHHH-Hhhhhhh--------hhcchhcchHHHHHHHHHHHHHHHHh---ccCCcCCCEEE
Confidence 0000000 0000000 00000001111111111111111110 11567899999
Q ss_pred EecCCCCCCChHHHHHhhccC-CCccEEEeCCCCCCcchhc--hhHHHHHHHHhhhhcccc
Q 024971 191 AWGDKDPWEPIELGRAYGNFD-SVEDFIVLPNVGHCPQVSL--YLSLSSACLHTLSYLHTC 248 (260)
Q Consensus 191 i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~--p~~~~~~i~~~l~~~~~~ 248 (260)
+.|+.|.. +.+....+.+.. ...+++.++ ++|+.+++. .+++++.|.++++.....
T Consensus 1215 ~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~-G~H~~ml~~~~~~~~a~~l~~~L~~~~~~ 1273 (1304)
T 2vsq_A 1215 LTSGADFD-IPEWLASWEEATTGVYRMKRGF-GTHAEMLQGETLDRNAEILLEFLNTQTVT 1273 (1304)
T ss_dssp EECSSCCC-CCSSEECSSTTBSSCCCEEECS-SCTTGGGSHHHHHHHHHHHHHHHHCCCCC
T ss_pred EEecCccc-cccchhhHHHHhCCCeEEEEeC-CCHHHHCCCHHHHHHHHHHHHHHhccchh
Confidence 99998863 222223344443 456788888 599888764 448999999999876543
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.39 E-value=7.3e-05 Score=58.24 Aligned_cols=87 Identities=16% Similarity=0.093 Sum_probs=57.7
Q ss_pred CCccEEEEEcC-CCCCCCCCCCCCC--C-CCCCCccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHh
Q 024971 4 AKSHRVYSIDL-IGYGYSDKPNPRD--F-FDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 4 ~~~~~v~~~D~-~G~G~S~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~ 72 (260)
.+...|+-+|. .|.|.|-...... . ...-..+.++.++++..+++.. ...+++|.|+|+||..+-.+|.
T Consensus 108 ~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~ 187 (483)
T 1ac5_A 108 ISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFAN 187 (483)
T ss_dssp GGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHH
T ss_pred hhcCCeEEEecCCCccccCCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHH
Confidence 34578999997 6999996543210 0 0001235677888887777663 4468999999999998887774
Q ss_pred hC------------ccchhhceEeccCccc
Q 024971 73 ME------------PEICRGMILLNISLRM 90 (260)
Q Consensus 73 ~~------------p~~v~~lvl~~~~~~~ 90 (260)
.. +-.++|+++-++....
T Consensus 188 ~i~~~n~~~~~~~~~inLkGi~IGNg~~d~ 217 (483)
T 1ac5_A 188 AILNHNKFSKIDGDTYDLKALLIGNGWIDP 217 (483)
T ss_dssp HHHHHHHHCCSTTSCCEEEEEEEEEECCCH
T ss_pred HHHHhcccccccCcccceeeeEecCCcccc
Confidence 31 1236788777776543
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=4.6e-05 Score=58.08 Aligned_cols=80 Identities=13% Similarity=-0.037 Sum_probs=54.3
Q ss_pred CccEEEEEcCC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-------cC--CceEEEEeChhhHHHHHHHhhC
Q 024971 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VK--DQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 5 ~~~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
+...++-+|.| |.|.|-.... ...+.++.++|+.++++.. .. .+++|.|.|+||..+-.+|...
T Consensus 86 ~~an~lfiDqPvGtGfSy~~~~------~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i 159 (421)
T 1cpy_A 86 SNATVIFLDQPVNVGFSYSGSS------GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEI 159 (421)
T ss_dssp GGSEEECCCCSTTSTTCEESSC------CCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHH
T ss_pred cccCEEEecCCCcccccCCCCC------CCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHH
Confidence 45688999964 9999865432 1334556667766666543 33 5899999999999988877532
Q ss_pred ------ccchhhceEeccCccc
Q 024971 75 ------PEICRGMILLNISLRM 90 (260)
Q Consensus 75 ------p~~v~~lvl~~~~~~~ 90 (260)
.-.++|+++-++...+
T Consensus 160 ~~~n~~~inLkGi~IGNg~~dp 181 (421)
T 1cpy_A 160 LSHKDRNFNLTSVLIGNGLTDP 181 (421)
T ss_dssp TTCSSCSSCCCEEEEESCCCCH
T ss_pred HhccccccceeeEEecCcccCh
Confidence 1236888777766543
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=7.6e-05 Score=56.13 Aligned_cols=36 Identities=8% Similarity=-0.144 Sum_probs=31.3
Q ss_pred CCceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 52 KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 52 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
.+++.++|||+||..++.+++..+ ||+.+|..++..
T Consensus 218 ~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 218 TKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGA 253 (433)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCT
T ss_pred hhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCC
Confidence 358999999999999999999885 799999888653
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=98.16 E-value=5e-06 Score=54.10 Aligned_cols=60 Identities=13% Similarity=-0.019 Sum_probs=52.1
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhccCC------------------------CccEEEeCCCCCCcchhchhHHHHHHHH
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNFDS------------------------VEDFIVLPNVGHCPQVSLYLSLSSACLH 240 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 240 (260)
.+++|+.+|+.|.+++.-..+.+.+.+. +.++..+.++||+...++|++..+.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 5899999999999999887777655543 5678899999999999999999999999
Q ss_pred hhhh
Q 024971 241 TLSY 244 (260)
Q Consensus 241 ~l~~ 244 (260)
|+..
T Consensus 144 fl~~ 147 (153)
T 1whs_B 144 FLQG 147 (153)
T ss_dssp HHHT
T ss_pred HHCC
Confidence 9964
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.11 E-value=9.1e-05 Score=54.91 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=38.9
Q ss_pred cHHHHHHHHHHHHHhh--------cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 35 TFETWASQLNDFCKDV--------VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 35 ~~~~~~~~~~~~~~~~--------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
.+..++=++...++.+ +.+++.++|||+||..++.+++..+ ||+.+|..++..
T Consensus 159 al~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~ 219 (375)
T 3pic_A 159 AMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGA 219 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCC
Confidence 4444444555555544 2257999999999999999999885 799999887653
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=2.5e-05 Score=60.84 Aligned_cols=85 Identities=13% Similarity=0.137 Sum_probs=66.9
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCC--CCCCccHHHHHHHHHHHHHhhc------CCceEEEEeChhhHHHHHHHhhCccc
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFF--DKPFYTFETWASQLNDFCKDVV------KDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
|--++.+++|-+|.|.+....... .....+.++-..|+..+++++. ..|++++|-|+||++|..+-.++|+.
T Consensus 73 ~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~l 152 (472)
T 4ebb_A 73 GALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHL 152 (472)
T ss_dssp TCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTT
T ss_pred CCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCe
Confidence 456899999999999764321110 1245788888899998888763 24899999999999999999999999
Q ss_pred hhhceEeccCccc
Q 024971 78 CRGMILLNISLRM 90 (260)
Q Consensus 78 v~~lvl~~~~~~~ 90 (260)
|.|.+..+++...
T Consensus 153 v~ga~ASSApv~a 165 (472)
T 4ebb_A 153 VAGALAASAPVLA 165 (472)
T ss_dssp CSEEEEETCCTTG
T ss_pred EEEEEecccceEE
Confidence 9999988877543
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00022 Score=52.01 Aligned_cols=50 Identities=10% Similarity=-0.023 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhh-c---------CCceEEEEeChhhHHHHHHHhhCc--cchhhceEeccC
Q 024971 38 TWASQLNDFCKDV-V---------KDQAFFICNSIGGLVGLQAAVMEP--EICRGMILLNIS 87 (260)
Q Consensus 38 ~~~~~~~~~~~~~-~---------~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~ 87 (260)
.+++++..+++.. . .++..|.||||||.-|+.+|.++| ++..++...++.
T Consensus 128 ~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~ 189 (299)
T 4fol_A 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPI 189 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCC
T ss_pred HHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccc
Confidence 3556777777543 2 135789999999999999999864 556666666654
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.86 E-value=3.3e-05 Score=59.61 Aligned_cols=82 Identities=18% Similarity=0.129 Sum_probs=54.3
Q ss_pred CCccEEEEEcC-CCCCCCCCCCCCCCCCCCCccHHHHHHH----HHHHHHh---hcCCceEEEEeChhhHHHHHHHhh--
Q 024971 4 AKSHRVYSIDL-IGYGYSDKPNPRDFFDKPFYTFETWASQ----LNDFCKD---VVKDQAFFICNSIGGLVGLQAAVM-- 73 (260)
Q Consensus 4 ~~~~~v~~~D~-~G~G~S~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~lvGhS~Gg~~a~~~a~~-- 73 (260)
.+..+++-+|. +|.|.|..... ....+-+..++| +..+++. +...+++|.|+|+||..+-.+|..
T Consensus 90 ~~~~~~lfiDqP~GtGfS~~~~~-----~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~ 164 (452)
T 1ivy_A 90 NLIANVLYLESPAGVGFSYSDDK-----FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVM 164 (452)
T ss_dssp GGSSEEEEECCSTTSTTCEESSC-----CCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHT
T ss_pred cccccEEEEecCCCCCcCCcCCC-----CCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHH
Confidence 35678999997 69999974321 011233344444 4444444 234689999999999966655543
Q ss_pred --CccchhhceEeccCccc
Q 024971 74 --EPEICRGMILLNISLRM 90 (260)
Q Consensus 74 --~p~~v~~lvl~~~~~~~ 90 (260)
.+-.++|+++.++...+
T Consensus 165 ~~~~~~l~g~~ign~~~d~ 183 (452)
T 1ivy_A 165 QDPSMNLQGLAVGNGLSSY 183 (452)
T ss_dssp TCTTSCEEEEEEESCCSBH
T ss_pred hcCccccceEEecCCccCh
Confidence 35568999999997643
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=4.7e-05 Score=53.62 Aligned_cols=82 Identities=15% Similarity=0.048 Sum_probs=58.8
Q ss_pred CCccEEEEEcCC-CCCCCCCCCCCCCCCCC-CccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHhhC
Q 024971 4 AKSHRVYSIDLI-GYGYSDKPNPRDFFDKP-FYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 4 ~~~~~v~~~D~~-G~G~S~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
.+...|+-+|.| |.|.|-..... .- ..+.++.++|+.++++.. ...+++|.|+|+||..+-.+|...
T Consensus 91 ~~~anvlfiDqPvGtGfSy~~~~~----~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i 166 (255)
T 1whs_A 91 NKVANVLFLDSPAGVGFSYTNTSS----DIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLV 166 (255)
T ss_dssp GGTSEEEEECCSTTSTTCEESSGG----GGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHH
T ss_pred cccCCEEEEecCCCCccCCCcCcc----ccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHH
Confidence 345789999975 99999654321 01 246777788877777643 346899999999999988887542
Q ss_pred c------cchhhceEeccCcc
Q 024971 75 P------EICRGMILLNISLR 89 (260)
Q Consensus 75 p------~~v~~lvl~~~~~~ 89 (260)
- -.++|+++.++...
T Consensus 167 ~~~n~~~inLkGi~ign~~~d 187 (255)
T 1whs_A 167 HRSKNPVINLKGFMVGNGLID 187 (255)
T ss_dssp HHHTCSSCEEEEEEEEEECCB
T ss_pred HHcCCcccccceEEecCCccC
Confidence 1 24789999998754
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=97.81 E-value=3.9e-05 Score=60.13 Aligned_cols=80 Identities=13% Similarity=0.023 Sum_probs=51.6
Q ss_pred ccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH---hhc--CCceEEEEeChhhHHHHHHHhhC--
Q 024971 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DVV--KDQAFFICNSIGGLVGLQAAVME-- 74 (260)
Q Consensus 6 ~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~lvGhS~Gg~~a~~~a~~~-- 74 (260)
++.|+.+|+| |++.+...... ......+.|....+.-+.+ .++ .+++.|+|||+||.++..++...
T Consensus 128 ~~vvv~~nYRlg~~Gf~~~~~~~~~---~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~ 204 (489)
T 1qe3_A 128 EVIVVTLNYRLGPFGFLHLSSFDEA---YSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAA 204 (489)
T ss_dssp TCEEEEECCCCHHHHSCCCTTTCTT---SCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGG
T ss_pred CEEEEecCccCcccccCcccccccc---CCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccc
Confidence 4999999999 66655332100 0123445555444333323 333 34799999999999998877653
Q ss_pred ccchhhceEeccCc
Q 024971 75 PEICRGMILLNISL 88 (260)
Q Consensus 75 p~~v~~lvl~~~~~ 88 (260)
++.++++|+.++..
T Consensus 205 ~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 205 KGLFQKAIMESGAS 218 (489)
T ss_dssp TTSCSEEEEESCCC
T ss_pred cchHHHHHHhCCCC
Confidence 45799999998864
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=97.80 E-value=3.8e-05 Score=60.33 Aligned_cols=83 Identities=12% Similarity=-0.011 Sum_probs=54.2
Q ss_pred ccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh---hc--CCceEEEEeChhhHHHHHHHhhC--
Q 024971 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VV--KDQAFFICNSIGGLVGLQAAVME-- 74 (260)
Q Consensus 6 ~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~lvGhS~Gg~~a~~~a~~~-- 74 (260)
++.|+++|+| |++.+...............+.|....+.-+.+. ++ .+++.|+|+|.||.++..++...
T Consensus 130 ~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~ 209 (498)
T 2ogt_A 130 DVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEA 209 (498)
T ss_dssp TCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGG
T ss_pred CEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccc
Confidence 3999999999 8887765321000001233455555544444333 33 35799999999999998887653
Q ss_pred ccchhhceEeccCc
Q 024971 75 PEICRGMILLNISL 88 (260)
Q Consensus 75 p~~v~~lvl~~~~~ 88 (260)
+..++++|+.++..
T Consensus 210 ~~lf~~~i~~sg~~ 223 (498)
T 2ogt_A 210 SGLFRRAMLQSGSG 223 (498)
T ss_dssp TTSCSEEEEESCCT
T ss_pred cchhheeeeccCCc
Confidence 34699999999864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=3.1e-06 Score=77.98 Aligned_cols=54 Identities=15% Similarity=0.116 Sum_probs=0.0
Q ss_pred ccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhCcc---chh---hceEeccC
Q 024971 34 YTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPE---ICR---GMILLNIS 87 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~---~lvl~~~~ 87 (260)
.++++++++..+.+.... ..++.++||||||.+|+.+|.+-.. .+. .++++++.
T Consensus 2281 ~~i~~la~~~~~~i~~~~p~gpy~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2281 DSIQSLASYYIECIRQVQPEGPYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp -------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 467788887777776654 3589999999999999999876432 244 67777763
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=4.8e-05 Score=54.63 Aligned_cols=40 Identities=20% Similarity=0.249 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCc
Q 024971 36 FETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
++.+.+++.++++.+ ...++++.||||||.+|..++....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 117 WRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEecCChHHHHHHHHHHHHH
Confidence 445566666666554 3348999999999999999998754
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=97.69 E-value=9.2e-05 Score=48.29 Aligned_cols=60 Identities=18% Similarity=0.083 Sum_probs=48.4
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhccC-----------------------------CCccEEEeCCCCCCcchhchhHHH
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNFD-----------------------------SVEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
.++||+..|..|.+++.-..+.+.+.+ .+.++..+.+|||+...++|++..
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 142 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 142 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHH
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHH
Confidence 589999999999999977666543221 123567888999999999999999
Q ss_pred HHHHHhhhh
Q 024971 236 SACLHTLSY 244 (260)
Q Consensus 236 ~~i~~~l~~ 244 (260)
+.+.+||..
T Consensus 143 ~m~~~fl~g 151 (155)
T 4az3_B 143 TMFSRFLNK 151 (155)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999964
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.69 E-value=2.9e-05 Score=55.78 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=28.4
Q ss_pred cHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhC
Q 024971 35 TFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 35 ~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
++..+.+++.+.++.+ ...++++.||||||.+|..+|...
T Consensus 114 ~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 114 SYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 4455555665555544 223599999999999999988765
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00027 Score=56.16 Aligned_cols=80 Identities=10% Similarity=-0.009 Sum_probs=53.2
Q ss_pred CccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHHHHHHH---HHhhcC--CceEEEEeChhhHHHHHHHhh--
Q 024971 5 KSHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDF---CKDVVK--DQAFFICNSIGGLVGLQAAVM-- 73 (260)
Q Consensus 5 ~~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~lvGhS~Gg~~a~~~a~~-- 73 (260)
.|+.|+++|+| |++.+..... .....+.|....+.-+ +..++. +++.|+|+|.||.++..++..
T Consensus 143 ~g~vvv~~nYRlg~~gf~~~~~~~~-----~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~ 217 (542)
T 2h7c_A 143 ENVVVVTIQYRLGIWGFFSTGDEHS-----RGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPL 217 (542)
T ss_dssp HTCEEEEECCCCHHHHHCCCSSTTC-----CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG
T ss_pred CCEEEEecCCCCccccCCCCCcccC-----ccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhh
Confidence 47999999999 5554432110 1234455555444333 333343 479999999999999888765
Q ss_pred CccchhhceEeccCcc
Q 024971 74 EPEICRGMILLNISLR 89 (260)
Q Consensus 74 ~p~~v~~lvl~~~~~~ 89 (260)
.+..++++|+.++...
T Consensus 218 ~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 218 AKNLFHRAISESGVAL 233 (542)
T ss_dssp GTTSCSEEEEESCCTT
T ss_pred hhHHHHHHhhhcCCcc
Confidence 2467899999988653
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00025 Score=50.94 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhC
Q 024971 36 FETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
+..+.+++.+.++.+ ...++++.|||+||.+|..++...
T Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 116 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 334445555555443 345899999999999999988765
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00024 Score=56.58 Aligned_cols=80 Identities=11% Similarity=0.044 Sum_probs=52.6
Q ss_pred CCccEEEEEcCCC----CCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh---hc--CCceEEEEeChhhHHHHHHHhh-
Q 024971 4 AKSHRVYSIDLIG----YGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VV--KDQAFFICNSIGGLVGLQAAVM- 73 (260)
Q Consensus 4 ~~~~~v~~~D~~G----~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~lvGhS~Gg~~a~~~a~~- 73 (260)
++|+.|+++|+|. +..+..... .....+.|....+.-+.+. ++ .+++.|+|+|.||.++..++..
T Consensus 143 ~~g~vvv~~nYRl~~~Gf~~~~~~~~-----~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~ 217 (551)
T 2fj0_A 143 SKDVIVITFNYRLNVYGFLSLNSTSV-----PGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSK 217 (551)
T ss_dssp GGSCEEEEECCCCHHHHHCCCSSSSC-----CSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCG
T ss_pred hCCeEEEEeCCcCCccccccCcccCC-----CCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCc
Confidence 4689999999994 332221110 1234556665554433333 33 3479999999999999988765
Q ss_pred -CccchhhceEeccCc
Q 024971 74 -EPEICRGMILLNISL 88 (260)
Q Consensus 74 -~p~~v~~lvl~~~~~ 88 (260)
.+..++++|+.++..
T Consensus 218 ~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 218 AADGLFRRAILMSGTS 233 (551)
T ss_dssp GGTTSCSEEEEESCCT
T ss_pred hhhhhhhheeeecCCc
Confidence 345789999999864
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00025 Score=51.22 Aligned_cols=39 Identities=18% Similarity=0.102 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCc
Q 024971 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 37 ~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
..+.+++.+.++.+ ...++++.|||+||.+|..++....
T Consensus 117 ~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 117 KLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 34445555555443 3358999999999999999988754
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00043 Score=49.43 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhC
Q 024971 39 WASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 39 ~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
+.+++.+.++.+ ...++++.|||+||.+|..++...
T Consensus 107 ~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 146 (261)
T 1uwc_A 107 VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHH
Confidence 334444444433 345899999999999999888753
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00048 Score=54.79 Aligned_cols=80 Identities=8% Similarity=-0.095 Sum_probs=51.7
Q ss_pred CccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH---hhcC--CceEEEEeChhhHHHHHHHhhC-
Q 024971 5 KSHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DVVK--DQAFFICNSIGGLVGLQAAVME- 74 (260)
Q Consensus 5 ~~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~lvGhS~Gg~~a~~~a~~~- 74 (260)
.|+.|+++++| |++.+...... .....+.|....+.-+.+ .++. +++.|+|+|.||..+..++...
T Consensus 142 ~g~vvv~~nYRlg~~Gf~~~~~~~~~----~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~ 217 (543)
T 2ha2_A 142 EGAVLVSMNYRVGTFGFLALPGSREA----PGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLP 217 (543)
T ss_dssp HCCEEEEECCCCHHHHHCCCTTCSSC----CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHH
T ss_pred CCEEEEEecccccccccccCCCCCCC----CCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcc
Confidence 48999999999 45544211100 123445555544443333 3333 4799999999999988776543
Q ss_pred -ccchhhceEeccCc
Q 024971 75 -PEICRGMILLNISL 88 (260)
Q Consensus 75 -p~~v~~lvl~~~~~ 88 (260)
+..++++|+.++..
T Consensus 218 ~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 218 SRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHTTCSEEEEESCCS
T ss_pred cHHhHhhheeccCCc
Confidence 45689999999854
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00074 Score=53.55 Aligned_cols=80 Identities=11% Similarity=-0.058 Sum_probs=52.5
Q ss_pred CccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHHHHHHH---HHhhcC--CceEEEEeChhhHHHHHHHhhC-
Q 024971 5 KSHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDF---CKDVVK--DQAFFICNSIGGLVGLQAAVME- 74 (260)
Q Consensus 5 ~~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~- 74 (260)
.|+.|+++++| |++.+...... .....+.|....+.-+ +..++. +++.|+|+|.||..+..++...
T Consensus 137 ~~~vvv~~nYRlg~~Gf~~~~~~~~~----~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~ 212 (529)
T 1p0i_A 137 ERVIVVSMNYRVGALGFLALPGNPEA----PGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPG 212 (529)
T ss_dssp HCCEEEEECCCCHHHHHCCCTTCTTS----CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG
T ss_pred CCeEEEEecccccccccccCCCCCCC----cCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCcc
Confidence 47999999999 55544211100 1334455655544333 333443 4799999999999998887653
Q ss_pred -ccchhhceEeccCc
Q 024971 75 -PEICRGMILLNISL 88 (260)
Q Consensus 75 -p~~v~~lvl~~~~~ 88 (260)
+..++++|+.++..
T Consensus 213 ~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 213 SHSLFTRAILQSGSF 227 (529)
T ss_dssp GGGGCSEEEEESCCT
T ss_pred chHHHHHHHHhcCcc
Confidence 35689999999864
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00089 Score=43.73 Aligned_cols=60 Identities=17% Similarity=0.037 Sum_probs=48.5
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhccC---------------------------CCccEEEeCCCCCCcchhchhHHHHH
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNFD---------------------------SVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
.+++|+.+|+.|.+++.-..+.+.+.+ .+.++..+.++||+...++|++..+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 589999999999999987666543322 12356788999999999999999999
Q ss_pred HHHhhhh
Q 024971 238 CLHTLSY 244 (260)
Q Consensus 238 i~~~l~~ 244 (260)
+.+|+..
T Consensus 146 ~~~fl~g 152 (158)
T 1gxs_B 146 FKQFLKG 152 (158)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9999964
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00088 Score=48.24 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=23.7
Q ss_pred HHHHHHhhcCCceEEEEeChhhHHHHHHHhhC
Q 024971 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 43 ~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
+..+++.....++++.|||+||.+|..+|...
T Consensus 128 l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l 159 (279)
T 3uue_A 128 VKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDI 159 (279)
T ss_dssp HHHHHHHHTCCCEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEcccCHHHHHHHHHHHHH
Confidence 33344444556899999999999999888653
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00059 Score=48.52 Aligned_cols=31 Identities=16% Similarity=0.071 Sum_probs=22.9
Q ss_pred HHHHHhhcCCceEEEEeChhhHHHHHHHhhC
Q 024971 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 44 ~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
..+++.....++++.|||+||.+|..++...
T Consensus 115 ~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 145 (258)
T 3g7n_A 115 KALIAKYPDYTLEAVGHSLGGALTSIAHVAL 145 (258)
T ss_dssp HHHHHHSTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCeEEEeccCHHHHHHHHHHHHH
Confidence 3334444446899999999999999887653
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00075 Score=49.43 Aligned_cols=24 Identities=21% Similarity=0.155 Sum_probs=19.9
Q ss_pred cCCceEEEEeChhhHHHHHHHhhC
Q 024971 51 VKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 51 ~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
...++++.|||+||.+|..++...
T Consensus 134 p~~~i~vtGHSLGGAlA~L~a~~l 157 (319)
T 3ngm_A 134 PSFKVVSVGHSLGGAVATLAGANL 157 (319)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHHH
T ss_pred CCCceEEeecCHHHHHHHHHHHHH
Confidence 345899999999999999888653
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00093 Score=48.68 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=24.4
Q ss_pred HHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC
Q 024971 42 QLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 42 ~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
.+.++++.....++++.|||+||.+|..+|...
T Consensus 143 ~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 143 KLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 344444444456899999999999999888754
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00091 Score=53.11 Aligned_cols=80 Identities=13% Similarity=-0.034 Sum_probs=52.1
Q ss_pred CccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH---hhcC--CceEEEEeChhhHHHHHHHhhC-
Q 024971 5 KSHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DVVK--DQAFFICNSIGGLVGLQAAVME- 74 (260)
Q Consensus 5 ~~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~lvGhS~Gg~~a~~~a~~~- 74 (260)
.|+.|+++++| |++.+...... .....+.|....+.-+.+ .+|. +++.|+|+|.||..+..++...
T Consensus 139 ~~~vvv~~nYRlg~~Gf~~~~~~~~~----~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~ 214 (537)
T 1ea5_A 139 EEVVLVSLSYRVGAFGFLALHGSQEA----PGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPG 214 (537)
T ss_dssp HTCEEEECCCCCHHHHHCCCTTCSSS----CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHH
T ss_pred CCEEEEEeccCccccccccCCCCCCC----cCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCcc
Confidence 57999999999 45444111100 133456666554443333 3343 5799999999999998877642
Q ss_pred -ccchhhceEeccCc
Q 024971 75 -PEICRGMILLNISL 88 (260)
Q Consensus 75 -p~~v~~lvl~~~~~ 88 (260)
+..++++|+.++..
T Consensus 215 ~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 215 SRDLFRRAILQSGSP 229 (537)
T ss_dssp HHTTCSEEEEESCCT
T ss_pred chhhhhhheeccCCc
Confidence 34689999999864
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00063 Score=53.81 Aligned_cols=82 Identities=11% Similarity=-0.059 Sum_probs=50.9
Q ss_pred CCccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHHHHHHH---HHhhcC--CceEEEEeChhhHHHHHHHhhC
Q 024971 4 AKSHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDF---CKDVVK--DQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 4 ~~~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
..|+.|+++|+| |++.+....... .....+.|....+.-+ +..++. +++.|+|+|.||..+...+...
T Consensus 131 ~~g~vvv~~nYRlg~~Gf~~~~~~~~~~---~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~ 207 (522)
T 1ukc_A 131 DDVIVFVTFNYRVGALGFLASEKVRQNG---DLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAY 207 (522)
T ss_dssp TSCCEEEEECCCCHHHHHCCCHHHHHSS---CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGG
T ss_pred CCcEEEEEecccccccccccchhccccC---CCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCC
Confidence 358999999999 555443210000 0234455555444333 333333 4799999999998776665543
Q ss_pred ----ccchhhceEeccCc
Q 024971 75 ----PEICRGMILLNISL 88 (260)
Q Consensus 75 ----p~~v~~lvl~~~~~ 88 (260)
+..++++|+.++..
T Consensus 208 ~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 208 GGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp GTCCCSSCSEEEEESCCC
T ss_pred CccccccchhhhhcCCCc
Confidence 45789999988864
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0029 Score=42.67 Aligned_cols=52 Identities=6% Similarity=-0.006 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc----cchhhceEeccC
Q 024971 36 FETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP----EICRGMILLNIS 87 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~ 87 (260)
..++...+....+.....+++|+|+|.|+.++-.++...| ++|.++++++-+
T Consensus 80 ~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 135 (197)
T 3qpa_A 80 IREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYT 135 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCC
Confidence 3444444444445555679999999999999988776654 578888888764
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0077 Score=43.59 Aligned_cols=79 Identities=16% Similarity=0.064 Sum_probs=56.4
Q ss_pred CccEEEEEcCC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHhhC--
Q 024971 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVME-- 74 (260)
Q Consensus 5 ~~~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~-- 74 (260)
+...++-+|.| |.|.|-.... ....+..+.++|+..+++.. ...+++|.|-|+||..+-.+|...
T Consensus 93 ~~an~lfiD~PvGtGfSy~~~~-----~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~ 167 (300)
T 4az3_A 93 LIANVLYLESPAGVGFSYSDDK-----FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQ 167 (300)
T ss_dssp GSSEEEEECCSTTSTTCEETTC-----CCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTT
T ss_pred hhhcchhhcCCCcccccccCCC-----cccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHh
Confidence 44689999987 8898865442 13456677777877776543 346899999999999988887542
Q ss_pred --ccchhhceEeccCc
Q 024971 75 --PEICRGMILLNISL 88 (260)
Q Consensus 75 --p~~v~~lvl~~~~~ 88 (260)
.-.++|+++-++..
T Consensus 168 ~~~inLkG~~iGNg~~ 183 (300)
T 4az3_A 168 DPSMNLQGLAVGNGLS 183 (300)
T ss_dssp CTTSCEEEEEEESCCS
T ss_pred CCCcccccceecCCcc
Confidence 12377888877764
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0018 Score=51.36 Aligned_cols=78 Identities=10% Similarity=0.032 Sum_probs=49.2
Q ss_pred CccEEEEEcCCCC--C--CCCC---CCCCCCCCCCCccHHHHHHHHHHHHH---hhcC--CceEEEEeChhhHHHHHHHh
Q 024971 5 KSHRVYSIDLIGY--G--YSDK---PNPRDFFDKPFYTFETWASQLNDFCK---DVVK--DQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 5 ~~~~v~~~D~~G~--G--~S~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~lvGhS~Gg~~a~~~a~ 72 (260)
.++.|+++|+|.- | .+.. .. .....+.|....+.-+.+ .++. +++.|+|+|.||..+...+.
T Consensus 147 ~~~vvv~~nYRl~~~gf~~~~~~~~~~------~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~ 220 (534)
T 1llf_A 147 KPIIHVAVNYRVASWGFLAGDDIKAEG------SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLI 220 (534)
T ss_dssp CCCEEEEECCCCHHHHHCCSHHHHHHT------CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCCCCCCcccccccC------CCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHc
Confidence 5799999999942 2 1110 00 123445555554444433 3433 57999999999987776555
Q ss_pred hC--------ccchhhceEeccCc
Q 024971 73 ME--------PEICRGMILLNISL 88 (260)
Q Consensus 73 ~~--------p~~v~~lvl~~~~~ 88 (260)
.. +..++++|+.++..
T Consensus 221 ~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 221 WNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp GGGGCCEETTEESCSEEEEESCCS
T ss_pred CCCccccccccchhHhHhhhccCc
Confidence 43 56789999998853
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0014 Score=52.08 Aligned_cols=78 Identities=12% Similarity=0.054 Sum_probs=50.2
Q ss_pred CccEEEEEcCCC----CCCCCC---CCCCCCCCCCCccHHHHHHHHHHHHHh---hcC--CceEEEEeChhhHHHHHHHh
Q 024971 5 KSHRVYSIDLIG----YGYSDK---PNPRDFFDKPFYTFETWASQLNDFCKD---VVK--DQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 5 ~~~~v~~~D~~G----~G~S~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~lvGhS~Gg~~a~~~a~ 72 (260)
.++.|+.+|+|. +..+.. .. .....+.|....+.-+.+. ++. +++.|+|+|.||.++...+.
T Consensus 155 ~~~vvv~~nYRl~~~gf~~~~~~~~~~------~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~ 228 (544)
T 1thg_A 155 QPVVFVSINYRTGPFGFLGGDAITAEG------NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLI 228 (544)
T ss_dssp CCCEEEEECCCCHHHHHCCSHHHHHHT------CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCcccCCCcccccccC------CCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHh
Confidence 479999999994 221110 00 1234455555555443333 333 57999999999998887765
Q ss_pred hC--------ccchhhceEeccCc
Q 024971 73 ME--------PEICRGMILLNISL 88 (260)
Q Consensus 73 ~~--------p~~v~~lvl~~~~~ 88 (260)
.. +..++++|+.++..
T Consensus 229 ~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 229 AYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp GGGTCCEETTEESCSEEEEESCCC
T ss_pred CCCccccccccccccceEEecccc
Confidence 42 45789999999854
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0035 Score=50.21 Aligned_cols=77 Identities=13% Similarity=0.036 Sum_probs=49.7
Q ss_pred ccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHHHHHHH---HHhhcC--CceEEEEeChhhHHHHHHHhh--C
Q 024971 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDF---CKDVVK--DQAFFICNSIGGLVGLQAAVM--E 74 (260)
Q Consensus 6 ~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~lvGhS~Gg~~a~~~a~~--~ 74 (260)
++-|+++++| |++.+..... ...+.+.|....+.-+ +..+|. +++.|+|+|.||..+..++.. .
T Consensus 135 ~vvvV~~nYRLg~~Gfl~~~~~~~-----pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~ 209 (579)
T 2bce_A 135 NVIVVTFNYRVGPLGFLSTGDSNL-----PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYN 209 (579)
T ss_dssp TCEEEEECCCCHHHHHCCCSSTTC-----CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGG
T ss_pred CEEEEEeCCccccccCCcCCCCCC-----CCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcch
Confidence 6899999999 5544322110 1233456665544433 334443 479999999999998877654 2
Q ss_pred ccchhhceEeccC
Q 024971 75 PEICRGMILLNIS 87 (260)
Q Consensus 75 p~~v~~lvl~~~~ 87 (260)
...+++.|+.++.
T Consensus 210 ~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 210 KGLIKRAISQSGV 222 (579)
T ss_dssp TTTCSEEEEESCC
T ss_pred hhHHHHHHHhcCC
Confidence 3468888888764
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0041 Score=42.05 Aligned_cols=52 Identities=10% Similarity=-0.044 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc----cchhhceEeccC
Q 024971 36 FETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP----EICRGMILLNIS 87 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~ 87 (260)
..++...+....++....+++|+|+|.|+.++-.++...| ++|.++++++-+
T Consensus 88 ~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 143 (201)
T 3dcn_A 88 INEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYT 143 (201)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCc
Confidence 3444444555555556679999999999999988876655 568888888764
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0056 Score=49.07 Aligned_cols=77 Identities=10% Similarity=-0.007 Sum_probs=50.1
Q ss_pred ccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH---hhcC--CceEEEEeChhhHHHHHHHhhCc-
Q 024971 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DVVK--DQAFFICNSIGGLVGLQAAVMEP- 75 (260)
Q Consensus 6 ~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~lvGhS~Gg~~a~~~a~~~p- 75 (260)
++.|+++|+| |+..+..... .....+.|....+.-+.+ .+|. +++.|+|+|.||.++..++....
T Consensus 160 ~~vvv~~~YRl~~~Gfl~~~~~~~-----~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~ 234 (574)
T 3bix_A 160 NVIVITVNYRLGVLGFLSTGDQAA-----KGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYS 234 (574)
T ss_dssp TCEEEEECCCCHHHHHCCCSSSSC-----CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTS
T ss_pred CEEEEEeCCcCcccccCcCCCCCC-----CCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCc
Confidence 5899999999 4433322110 134456666655544443 3443 47999999999999988876543
Q ss_pred --cchhhceEeccC
Q 024971 76 --EICRGMILLNIS 87 (260)
Q Consensus 76 --~~v~~lvl~~~~ 87 (260)
..++++|+.++.
T Consensus 235 ~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 235 EKGLFQRAIAQSGT 248 (574)
T ss_dssp CTTSCCEEEEESCC
T ss_pred chhHHHHHHHhcCC
Confidence 347888888764
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0092 Score=40.84 Aligned_cols=51 Identities=10% Similarity=0.083 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHh--------------hCc----cchhhceEeccC
Q 024971 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAV--------------MEP----EICRGMILLNIS 87 (260)
Q Consensus 37 ~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~--------------~~p----~~v~~lvl~~~~ 87 (260)
.+-++++...++.. ...+++|+|+|.|+.++-.++. ..| ++|.++++++-+
T Consensus 62 ~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1g66_A 62 AQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCC
Confidence 44445555555443 4568999999999999988764 122 467788888765
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.01 Score=39.67 Aligned_cols=48 Identities=15% Similarity=0.059 Sum_probs=35.5
Q ss_pred HHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc----cchhhceEeccC
Q 024971 40 ASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP----EICRGMILLNIS 87 (260)
Q Consensus 40 ~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~ 87 (260)
...+....+.....+++|+|+|.|+.++-.++...| ++|.++++++-+
T Consensus 80 ~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 131 (187)
T 3qpd_A 80 QGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYT 131 (187)
T ss_dssp HHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCC
Confidence 333444445556679999999999999998876654 568888888764
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0096 Score=40.75 Aligned_cols=51 Identities=10% Similarity=0.003 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHh--------------hCc----cchhhceEeccC
Q 024971 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAV--------------MEP----EICRGMILLNIS 87 (260)
Q Consensus 37 ~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~--------------~~p----~~v~~lvl~~~~ 87 (260)
.+-++++...++.. ...+++|+|+|.|+.++-.++. ..| ++|.++++++-+
T Consensus 62 ~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1qoz_A 62 VNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCC
Confidence 34444555544443 4568999999999999988764 122 467788888765
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.01 Score=47.75 Aligned_cols=84 Identities=8% Similarity=-0.100 Sum_probs=49.8
Q ss_pred CccEEEEEcCC----CCCCCCCCCC--CCCCCCCCccHHHHHHHHHHHHH---hhcC--CceEEEEeChhhHHHHHHHhh
Q 024971 5 KSHRVYSIDLI----GYGYSDKPNP--RDFFDKPFYTFETWASQLNDFCK---DVVK--DQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 5 ~~~~v~~~D~~----G~G~S~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
.++-|+++++| |+........ ..........+.|....+.-+.+ .++. +++.|+|+|.||..+..++..
T Consensus 171 ~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~ 250 (585)
T 1dx4_A 171 GNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMS 250 (585)
T ss_dssp HTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHC
T ss_pred CCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhC
Confidence 47899999999 4443211000 00000123445555544443333 3333 479999999999988777654
Q ss_pred C--ccchhhceEeccCc
Q 024971 74 E--PEICRGMILLNISL 88 (260)
Q Consensus 74 ~--p~~v~~lvl~~~~~ 88 (260)
. ...++++|+.++..
T Consensus 251 ~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 251 PVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp TTTTTSCCEEEEESCCT
T ss_pred CcccchhHhhhhhcccc
Confidence 2 35688889988754
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.01 Score=45.97 Aligned_cols=60 Identities=18% Similarity=0.083 Sum_probs=48.3
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhccC-----------------------------CCccEEEeCCCCCCcchhchhHHH
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGNFD-----------------------------SVEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
.++||+.+|+.|.+++.-..+.+.+.+ .+.++..+.++||+...++|++..
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al 440 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHH
Confidence 589999999999999977665543221 123567889999999999999999
Q ss_pred HHHHHhhhh
Q 024971 236 SACLHTLSY 244 (260)
Q Consensus 236 ~~i~~~l~~ 244 (260)
+.+..|+..
T Consensus 441 ~m~~~fl~g 449 (452)
T 1ivy_A 441 TMFSRFLNK 449 (452)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999999863
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.014 Score=41.08 Aligned_cols=55 Identities=15% Similarity=-0.049 Sum_probs=37.9
Q ss_pred cHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhh-----------CccchhhceEeccCcc
Q 024971 35 TFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM-----------EPEICRGMILLNISLR 89 (260)
Q Consensus 35 ~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~-----------~p~~v~~lvl~~~~~~ 89 (260)
+..+-++++...++.. ...+++|+|+|.|+.++-.++.. ..++|.++++++-+..
T Consensus 52 S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r 121 (254)
T 3hc7_A 52 SVEKGVAELILQIELKLDADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMR 121 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTC
T ss_pred hHHHHHHHHHHHHHHHHhhCCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCC
Confidence 3344555555555443 44689999999999999887754 2357888888876543
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.01 Score=40.51 Aligned_cols=51 Identities=10% Similarity=0.005 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhC--c----cchhhceEeccC
Q 024971 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVME--P----EICRGMILLNIS 87 (260)
Q Consensus 37 ~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~--p----~~v~~lvl~~~~ 87 (260)
.+-++++...++.. ...+++|+|+|.|+.++-.++... | ++|.++++++-+
T Consensus 57 ~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 57 AAGTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 44455555555443 456899999999999988876543 3 468888888854
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.019 Score=41.67 Aligned_cols=52 Identities=12% Similarity=0.037 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhh--------CccchhhceEeccCc
Q 024971 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM--------EPEICRGMILLNISL 88 (260)
Q Consensus 37 ~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~--------~p~~v~~lvl~~~~~ 88 (260)
.+-++++...++.. -..+++|+|+|.|+.++-.++.. .+++|.++++++-+.
T Consensus 113 ~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP~ 176 (302)
T 3aja_A 113 AEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADGR 176 (302)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCTT
T ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCCC
Confidence 34444444444443 45689999999999999887642 347899999988653
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.014 Score=43.35 Aligned_cols=22 Identities=18% Similarity=0.149 Sum_probs=19.1
Q ss_pred CceEEEEeChhhHHHHHHHhhC
Q 024971 53 DQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
.++++.|||+||.+|..+|...
T Consensus 166 ~~i~vtGHSLGGAlA~l~a~~l 187 (346)
T 2ory_A 166 AKICVTGHSKGGALSSTLALWL 187 (346)
T ss_dssp EEEEEEEETHHHHHHHHHHHHH
T ss_pred ceEEEecCChHHHHHHHHHHHH
Confidence 5799999999999999888653
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.028 Score=40.06 Aligned_cols=80 Identities=14% Similarity=0.116 Sum_probs=48.7
Q ss_pred CccEEEEEcC-CCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHhh---
Q 024971 5 KSHRVYSIDL-IGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (260)
Q Consensus 5 ~~~~v~~~D~-~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~~--- 73 (260)
+...++-+|. .|.|.|-...... -..+-++.++|+..+++.. ...+++|.|.| |-.+...+...
T Consensus 98 ~~anllfiDqPvGtGfSy~~~~~~----~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~ 172 (270)
T 1gxs_A 98 KAANILFAESPAGVGFSYSNTSSD----LSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRN 172 (270)
T ss_dssp GTSEEEEECCSTTSTTCEESSGGG----GCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHT
T ss_pred ccccEEEEeccccccccCCCCCcc----ccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhc
Confidence 4578999996 5999986543210 1223445566666655542 34589999999 65544333221
Q ss_pred C----ccchhhceEeccCcc
Q 024971 74 E----PEICRGMILLNISLR 89 (260)
Q Consensus 74 ~----p~~v~~lvl~~~~~~ 89 (260)
. .-.++|+++.++...
T Consensus 173 n~~~~~inLkGi~ign~~~d 192 (270)
T 1gxs_A 173 RNNSPFINFQGLLVSSGLTN 192 (270)
T ss_dssp TTTCTTCEEEEEEEESCCCB
T ss_pred cccccceeeeeEEEeCCccC
Confidence 1 124788888888753
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.04 E-value=0.004 Score=47.19 Aligned_cols=34 Identities=9% Similarity=0.049 Sum_probs=23.6
Q ss_pred HHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhC
Q 024971 41 SQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 41 ~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
+.+..+++.... .++++.|||+||.+|..+|...
T Consensus 214 ~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 214 REVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 334444444432 3689999999999999888653
|
| >3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=88.31 E-value=0.39 Score=35.17 Aligned_cols=29 Identities=14% Similarity=0.070 Sum_probs=23.2
Q ss_pred HHHHhhcCCceEEEEeChhhHHHHHHHhh
Q 024971 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 45 ~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
++++..|+++-.++|||+|=+.|+.+|..
T Consensus 74 ~~l~~~Gi~P~~v~GHSlGE~aAa~~aG~ 102 (307)
T 3im8_A 74 RLLQEKGYQPDMVAGLSLGEYSALVASGA 102 (307)
T ss_dssp HHHHHTTCCCSEEEESTTHHHHHHHHTTS
T ss_pred HHHHHcCCCceEEEccCHHHHHHHHHcCC
Confidence 44566688899999999999988877643
|
| >3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=87.84 E-value=0.42 Score=35.46 Aligned_cols=31 Identities=10% Similarity=-0.056 Sum_probs=24.9
Q ss_pred HHHHHHhhcCCceEEEEeChhhHHHHHHHhh
Q 024971 43 LNDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 43 ~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
+.++++..|+++-.++|||+|=+.|+.+|..
T Consensus 73 l~~ll~~~Gi~P~~v~GHSlGE~aAa~~AG~ 103 (336)
T 3ptw_A 73 ILTALDKLGVKSHISCGLSLGEYSALIHSGA 103 (336)
T ss_dssp HHHHHHHTTCCCSEEEESTTHHHHHHHHTTS
T ss_pred HHHHHHHcCCCCCEEEEcCHhHHHHHHHhCC
Confidence 3456677789999999999999988877643
|
| >2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A | Back alignment and structure |
|---|
Probab=87.31 E-value=0.57 Score=34.20 Aligned_cols=29 Identities=10% Similarity=0.083 Sum_probs=23.1
Q ss_pred HHHHhh---cCCceEEEEeChhhHHHHHHHhh
Q 024971 45 DFCKDV---VKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 45 ~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
++++.. |+++-.++|||+|=+.|+.+|..
T Consensus 73 ~~l~~~~~~Gi~P~~v~GhSlGE~aAa~~aG~ 104 (303)
T 2qc3_A 73 QELARRCVLAGKDVIVAGHSVGEIAAYAIAGV 104 (303)
T ss_dssp HHHHHTTTTTTCCEEEEECTTHHHHHHHHTTS
T ss_pred HHHHHhhhcCCCccEEEECCHHHHHHHHHhCC
Confidence 345556 88999999999999998877643
|
| >2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=87.05 E-value=0.5 Score=34.53 Aligned_cols=29 Identities=21% Similarity=0.020 Sum_probs=23.5
Q ss_pred HHHHh-hcCCceEEEEeChhhHHHHHHHhh
Q 024971 45 DFCKD-VVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 45 ~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
++++. .|+++-.++|||+|=+.|+.+|..
T Consensus 72 ~~l~~~~Gi~P~~v~GHSlGE~aAa~~AG~ 101 (305)
T 2cuy_A 72 RAFLEAGGKPPALAAGHSLGEWTAHVAAGT 101 (305)
T ss_dssp HHHHHTTCCCCSEEEESTHHHHHHHHHTTS
T ss_pred HHHHHhcCCCCcEEEECCHHHHHHHHHhCC
Confidence 44566 788999999999999998877653
|
| >2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=86.56 E-value=0.72 Score=34.00 Aligned_cols=31 Identities=10% Similarity=0.096 Sum_probs=24.7
Q ss_pred HHHHHhh---cCCceEEEEeChhhHHHHHHHhhC
Q 024971 44 NDFCKDV---VKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 44 ~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
.++++.. |+++-.++|||+|=+.|+.+|...
T Consensus 84 ~~ll~~~~~~Gi~P~~v~GHSlGE~aAa~~AG~l 117 (321)
T 2h1y_A 84 YQLLNKQANGGLKPVFALGHSLGEVSAVSLSGAL 117 (321)
T ss_dssp HHHHHHHSTTSCCCSEEEECTHHHHHHHHHHTTS
T ss_pred HHHHHHhhhcCCCccEEEEcCHHHHHHHHHcCCC
Confidence 3455666 899999999999999998877543
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A | Back alignment and structure |
|---|
Probab=86.34 E-value=0.58 Score=35.72 Aligned_cols=30 Identities=17% Similarity=0.067 Sum_probs=24.8
Q ss_pred HHHHHhhcCCceEEEEeChhhHHHHHHHhh
Q 024971 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 44 ~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
.++++..|+++-.++|||+|=+.|+.+|..
T Consensus 159 ~~ll~~~Gv~P~~v~GHS~GE~aAa~~AG~ 188 (401)
T 4amm_A 159 IRWLDRLGARPVGALGHSLGELAALSWAGA 188 (401)
T ss_dssp HHHHHHHTCCCSEEEECTTHHHHHHHHTTS
T ss_pred HHHHHHcCCCCCEEEECCHHHHHHHHHhCC
Confidence 456677899999999999999988877643
|
| >1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* | Back alignment and structure |
|---|
Probab=86.23 E-value=0.59 Score=34.25 Aligned_cols=29 Identities=21% Similarity=0.198 Sum_probs=23.2
Q ss_pred HHHHhh-cCCceEEEEeChhhHHHHHHHhh
Q 024971 45 DFCKDV-VKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 45 ~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
++++.. |+++-.++|||+|=+.|+.+|..
T Consensus 75 ~~l~~~~Gi~P~~v~GhSlGE~aAa~~aG~ 104 (309)
T 1mla_A 75 RVWQQQGGKAPAMMAGHSLGEYSALVCAGV 104 (309)
T ss_dssp HHHHHTTCCCCSEEEESTHHHHHHHHHTTS
T ss_pred HHHHHhcCCCCCEEEECCHHHHHHHHHhCC
Confidence 345566 88999999999999988877654
|
| >3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* | Back alignment and structure |
|---|
Probab=86.21 E-value=0.57 Score=34.40 Aligned_cols=30 Identities=20% Similarity=0.170 Sum_probs=23.4
Q ss_pred HHHHh-hcCCceEEEEeChhhHHHHHHHhhC
Q 024971 45 DFCKD-VVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 45 ~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
++++. .|+++-.++|||+|=+.|+.+|...
T Consensus 77 ~~l~~~~Gi~P~~v~GhSlGE~aAa~~aG~l 107 (314)
T 3k89_A 77 RLWTAQRGQRPALLAGHSLGEYTALVAAGVL 107 (314)
T ss_dssp HHHHHTTCCEEEEEEESTHHHHHHHHHTTSS
T ss_pred HHHHHhcCCCCcEEEECCHHHHHHHHHhCCC
Confidence 44555 6888999999999999988776443
|
| >3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B* | Back alignment and structure |
|---|
Probab=85.87 E-value=0.96 Score=31.27 Aligned_cols=51 Identities=6% Similarity=0.083 Sum_probs=35.8
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC----C--ceEEEEeChhh
Q 024971 10 YSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----D--QAFFICNSIGG 64 (260)
Q Consensus 10 ~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~lvGhS~Gg 64 (260)
+.+-+-|||++...... -..++.++++..+..+.+.++. + ++.|+|.||-+
T Consensus 103 iRwqlVGHGr~e~n~~~----fag~sadeLa~~L~~f~~~~~~~~~pK~i~IsLvGCsL~s 159 (254)
T 3pa8_A 103 IKLTFIGHGKDEFNTDI----FAGFDVDSLSTEIEAAIDLAKEDISPKSIEINLLGCNMFS 159 (254)
T ss_dssp EEEEEECCCCSSCCSSE----ETTEEHHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCCC
T ss_pred eEEEEEecCcCCCCcce----eccCCHHHHHHHHHHHHHHHhhccCCCCceEEEEeecccC
Confidence 34556699998664421 2568999999999999988853 2 36778877643
|
| >3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=85.59 E-value=0.68 Score=35.23 Aligned_cols=28 Identities=29% Similarity=0.389 Sum_probs=23.1
Q ss_pred HHHHhhcCCceEEEEeChhhHHHHHHHh
Q 024971 45 DFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 45 ~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 72 (260)
.+++..|+++-.++|||+|=+.|+.+|.
T Consensus 76 ~ll~~~Gi~P~av~GHSlGE~aAa~aAG 103 (394)
T 3g87_A 76 AKCEDSGETPDFLAGHSLGEFNALLAAG 103 (394)
T ss_dssp HHHHHHCCCCSEEEECTTHHHHHHHHTT
T ss_pred HHHHHcCCCCceeeecCHHHHHHHHHhC
Confidence 4556678999999999999988887764
|
| >2qub_A Extracellular lipase; beta roll, alpha/beta hydrolase, helical hairpin, hydrolase; 1.80A {Serratia marcescens} PDB: 2qua_A | Back alignment and structure |
|---|
Probab=85.37 E-value=2.3 Score=34.23 Aligned_cols=40 Identities=15% Similarity=0.136 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhhcCC--ceEEEEeChhhHHHHHHHhhCccc
Q 024971 38 TWASQLNDFCKDVVKD--QAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 38 ~~~~~~~~~~~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
.+..++.++.+..++. .+.+-|||.||+.+-.+|....++
T Consensus 184 ~ll~~v~~~a~a~gl~g~dv~vsghslgg~~~n~~a~~~~~~ 225 (615)
T 2qub_A 184 NLLGDVAKFAQAHGLSGEDVVVSGHSLGGLAVNSMAAQSDAN 225 (615)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHcCCCCCcEEEeccccchhhhhHHHHhhccc
Confidence 3344445555555554 799999999999999888755443
|
| >3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=84.44 E-value=0.81 Score=33.67 Aligned_cols=29 Identities=21% Similarity=0.186 Sum_probs=22.4
Q ss_pred HHHHhhcCC----ceEEEEeChhhHHHHHHHhh
Q 024971 45 DFCKDVVKD----QAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 45 ~~~~~~~~~----~~~lvGhS~Gg~~a~~~a~~ 73 (260)
++++..|++ +-.++|||+|=+.|+.+|..
T Consensus 78 ~~l~~~Gi~p~~~P~~v~GHSlGE~aAa~~aG~ 110 (318)
T 3qat_A 78 RVMEQLGLNVEKKVKFVAGHSLGEYSALCAAGT 110 (318)
T ss_dssp HHHHHTTCCHHHHCSEEEESTTHHHHHHHHTTS
T ss_pred HHHHHcCCCcCCCCCEEEECCHHHHHHHHHhCC
Confidence 344556777 88999999999998877643
|
| >3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* | Back alignment and structure |
|---|
Probab=84.33 E-value=0.74 Score=36.17 Aligned_cols=30 Identities=17% Similarity=0.055 Sum_probs=24.2
Q ss_pred HHHHHhhcCCceEEEEeChhhHHHHHHHhh
Q 024971 44 NDFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 44 ~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
.++++..|+++-.++|||+|=+.|+.+|..
T Consensus 213 ~~ll~~~Gv~P~av~GHS~GE~aAa~~AG~ 242 (491)
T 3tzy_A 213 GELLRHHGAKPAAVIGQSLGEAASAYFAGG 242 (491)
T ss_dssp HHHHHHTTCCCSEEEECGGGHHHHHHHTTS
T ss_pred HHHHHHcCCCcceEeecCHhHHHHHHHcCC
Confidence 345666788999999999999988877654
|
| >3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=83.69 E-value=0.9 Score=33.40 Aligned_cols=29 Identities=14% Similarity=0.055 Sum_probs=22.5
Q ss_pred HHHHh-hcCCceEEEEeChhhHHHHHHHhh
Q 024971 45 DFCKD-VVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 45 ~~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
++++. .|+++-.++|||+|=+.|+.+|..
T Consensus 79 ~~l~~~~gi~P~~v~GHSlGE~aAa~~AG~ 108 (316)
T 3tqe_A 79 RCWEALGGPKPQVMAGHSLGEYAALVCAGA 108 (316)
T ss_dssp HHHHHTTCCCCSEEEESTHHHHHHHHHTTS
T ss_pred HHHHHhcCCCCcEEEECCHHHHHHHHHhCC
Confidence 34455 477899999999999988877643
|
| >3ho6_A Toxin A; inositol phosphate, enterotoxin; HET: IHP; 1.60A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=83.29 E-value=2.3 Score=29.93 Aligned_cols=49 Identities=8% Similarity=0.194 Sum_probs=33.9
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC----Cce--EEEEeChhh
Q 024971 12 IDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK----DQA--FFICNSIGG 64 (260)
Q Consensus 12 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~lvGhS~Gg 64 (260)
+-+-|||+....... -..++.++++.-+..+.+.++. +.+ .|+|.||+.
T Consensus 108 WqlVGHGr~e~n~~t----laG~sa~~LA~~L~~f~~~~~~~~~P~~I~~sLvGCsL~s 162 (267)
T 3ho6_A 108 VTFIGHGKDEFNTSE----FARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLGCNMFS 162 (267)
T ss_dssp EEEECCCCSSCCSSC----BTTBCHHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCCC
T ss_pred EEEEeCCCCCCCccc----cCCCCHHHHHHHHHHHHHHhhccCCCCcceeeeEeeecCC
Confidence 334599998543321 3578999999999999888753 345 777777654
|
| >3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=82.74 E-value=1 Score=33.11 Aligned_cols=28 Identities=18% Similarity=0.138 Sum_probs=21.9
Q ss_pred HHHhh-cCCceEEEEeChhhHHHHHHHhh
Q 024971 46 FCKDV-VKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 46 ~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
++... |+++-.++|||+|=+.|+.+|..
T Consensus 82 ~l~~~~Gi~P~~v~GHSlGE~aAa~~AG~ 110 (318)
T 3ezo_A 82 AWQQAGGAQPSIVAGHSLGEYTALVAAGA 110 (318)
T ss_dssp HHHHTTCCCCSEEEESTHHHHHHHHHTTS
T ss_pred HHHHccCCCCcEEEECCHHHHHHHHHhCC
Confidence 34444 88899999999999988877644
|
| >1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B | Back alignment and structure |
|---|
Probab=80.88 E-value=0.96 Score=33.25 Aligned_cols=22 Identities=14% Similarity=0.052 Sum_probs=18.9
Q ss_pred CCceEEEEeChhhHHHHHHHhh
Q 024971 52 KDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 52 ~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
+++-.++|||+|=+.|+.+|..
T Consensus 89 i~P~~v~GhSlGE~aAa~~AG~ 110 (317)
T 1nm2_A 89 FTPGAVAGHSVGEITAAVFAGV 110 (317)
T ss_dssp CCCSEEEESTTHHHHHHHHTTS
T ss_pred ccccEEEEcCHHHHHHHHHHCC
Confidence 7888999999999998877643
|
| >3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A | Back alignment and structure |
|---|
Probab=80.87 E-value=1.3 Score=31.93 Aligned_cols=28 Identities=21% Similarity=0.242 Sum_probs=21.6
Q ss_pred HHHHhhcCCceEEEEeChhhHHHHHHHhh
Q 024971 45 DFCKDVVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 45 ~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
.+++..+ ++-.++|||+|=..|+.+|..
T Consensus 71 ~~~~~~g-~P~~v~GHSlGE~aAa~~aG~ 98 (281)
T 3sbm_A 71 KRREEEA-PPDFLAGHSLGEFSALFAAGV 98 (281)
T ss_dssp HHHHHSC-CCSEEEECTTHHHHHHHHTTS
T ss_pred HHHHhCC-CCcEEEEcCHHHHHHHHHhCC
Confidence 3445567 888999999999988877643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 260 | ||||
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 3e-12 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 9e-12 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 2e-11 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 3e-11 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 6e-11 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 1e-09 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 3e-09 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 8e-09 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 1e-08 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 1e-08 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 1e-08 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 5e-08 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 9e-08 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 2e-07 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 5e-07 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 2e-06 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 2e-06 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 2e-06 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 9e-06 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 1e-05 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 8e-05 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 9e-05 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 1e-04 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 1e-04 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 2e-04 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 2e-04 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 3e-04 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 4e-04 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 7e-04 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 0.001 |
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 63.2 bits (152), Expect = 3e-12
Identities = 30/268 (11%), Positives = 69/268 (25%), Gaps = 44/268 (16%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPF-------YTFETWASQLNDFCKDVVKDQA 55
+ V+ + G ++ + F + ++ K +D+
Sbjct: 88 ADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKL 147
Query: 56 FFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA 115
++ +S G +G A P++ + + + +K L+ L +
Sbjct: 148 HYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIF 207
Query: 116 AGKLFYKMVATSESVRNILC---------------QCYNDTSQVTEELVEKILQPGLETG 160
K+FY + + +C C DT + ++ L
Sbjct: 208 GNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGT 267
Query: 161 AADVFLEF---------------------ICYSGGPLPEELLPQVKCPVLIAWGDKDPWE 199
+ L + + Y P L + P+ + G D
Sbjct: 268 SVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLA 327
Query: 200 PIELGRA-YGNFDSVEDFIVLPNVGHCP 226
++ +P H
Sbjct: 328 DPHDVDLLLSKLPNLIYHRKIPPYNHLD 355
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.3 bits (147), Expect = 9e-12
Identities = 25/241 (10%), Positives = 55/241 (22%), Gaps = 36/241 (14%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
V +DL S +P + + + + IC S GGLV
Sbjct: 32 TVVTVLDLFDGRESLRP--------LWEQVQGFREAVVPIMAK-APQGVHLICYSQGGLV 82
Query: 67 GLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVAT 126
+ + + S P G+ + L T+ Y++ +
Sbjct: 83 CRALLSVMDDHNVDSFISLSS---------PQMGQYGDTDYLKWLFPTSMRSNLYRICYS 133
Query: 127 SESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP--------- 177
+C ++D L + + +
Sbjct: 134 PWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVGHLVLIGGPD 193
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAYG---------NFDSVEDFIVLPNVGHCPQV 228
+ ++ + + + +E Y + + H
Sbjct: 194 DGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWH 253
Query: 229 S 229
S
Sbjct: 254 S 254
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 61.0 bits (146), Expect = 2e-11
Identities = 32/246 (13%), Positives = 58/246 (23%), Gaps = 26/246 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+R+ D G G S D T + + + D+ S
Sbjct: 57 DPAKYRIVLFDQRGSGRSTP-----HADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSW 111
Query: 63 GGLVGLQAAVMEPEICRGMILLNISL------RMLHIKKQPWYGRPLIRSFQNLLRNTAA 116
G + L A P+ ++L I L + + + N +
Sbjct: 112 GSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVER 171
Query: 117 GKLFYKM----------VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL 166
L + + + + V E+ V A +
Sbjct: 172 ADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIEN 231
Query: 167 EFICYSG-----GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPN 221
+ G L + P +I G D P++ + P
Sbjct: 232 HYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPA 291
Query: 222 VGHCPQ 227
GH
Sbjct: 292 SGHSAF 297
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 60.2 bits (145), Expect = 3e-11
Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 19/114 (16%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+ +VY +L G+ D PN E + + + I +S G
Sbjct: 39 SHGAKVYVANLSGFQSDDGPN---------GRGEQLLAYVKQVLAATGATKVNLIGHSQG 89
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG 117
GL A + P++ + + P G Q++L+ G
Sbjct: 90 GLTSRYVAAVAPQLVASVTTIGT----------PHRGSEFADFVQDVLKTDPTG 133
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 58.7 bits (140), Expect = 6e-11
Identities = 29/227 (12%), Positives = 54/227 (23%), Gaps = 15/227 (6%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFIC-NSI 62
A H+V ++DL G + +F+ ++ L F + + + + S
Sbjct: 27 ALGHKVTALDLAASGVDPRQIEEI------GSFDEYSEPLLTFLEALPPGEKVILVGESC 80
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GGL AA E + N L + + K
Sbjct: 81 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGK 140
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ + +L + E L F
Sbjct: 141 EITGLKLGFTLLRENLYTLCGPEEY--------ELAKMLTRKGSLFQNILAKRPFFTKEG 192
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
+ W D+D E + + H Q++
Sbjct: 193 YGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLT 239
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 55.3 bits (131), Expect = 1e-09
Identities = 27/228 (11%), Positives = 60/228 (26%), Gaps = 15/228 (6%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
A H+V ++DL G + ++ ++ + ++ + +S+G
Sbjct: 27 AAGHKVTALDLAASGTDLRKI-----EELRTLYDYTLPLMELMESLSADEKVILVGHSLG 81
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM 123
G+ A P+ + L + P + T A
Sbjct: 82 GMNLGLAMEKYPQKIYAAVFLAAFM--------PDSVHNSSFVLEQYNERTPAENWLDTQ 133
Query: 124 VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE--ELL 181
S L + + +L + L ++ V + +
Sbjct: 134 FLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDE 193
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
+ +D P E R + V + I + H +
Sbjct: 194 RFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLC 241
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 54.1 bits (128), Expect = 3e-09
Identities = 35/226 (15%), Positives = 75/226 (33%), Gaps = 22/226 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ +RV ++D++G+G + KP+ D+ + +N K + NS+
Sbjct: 48 LARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAMNFDGKV------SIVGNSM 101
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG GL +V+ E+ ++L+ + ++ I + +
Sbjct: 102 GGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPII----------------NYDFT 145
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
V+ + + + G E +
Sbjct: 146 REGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIR 205
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
+V+ P L+ G D P+E + + ++P+ GH +
Sbjct: 206 KVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMI 251
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 52.9 bits (125), Expect = 8e-09
Identities = 33/229 (14%), Positives = 68/229 (29%), Gaps = 10/229 (4%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+A SHR + DLIG + Y F+ L+ F + + ++ + +
Sbjct: 52 VAPSHRCIAPDLIGM-------GKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDW 104
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G +G A PE +G+ + + + P + R ++F+
Sbjct: 105 GSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNA 164
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPL---PEE 179
+ + + E ++ + + L ++ + + L
Sbjct: 165 FIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMN 224
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
L Q P L+ WG P + + H Q
Sbjct: 225 WLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQE 273
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.0 bits (125), Expect = 1e-08
Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 31/251 (12%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+RV ++D+ GYG + Y E ++ F + QA FI + G
Sbjct: 57 QAGYRVLAMDMKGYGE-----SSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWG 111
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPW------------------------Y 99
G++ A+ PE R + LN + P
Sbjct: 112 GMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAEL 171
Query: 100 GRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159
+ L R+F++L R + L V + + + + + VTEE ++ +Q ++
Sbjct: 172 EQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS 231
Query: 160 GAADVF--LEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFI 217
G + + + L ++ P L+ +KD ++ + ++
Sbjct: 232 GFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRG 291
Query: 218 VLPNVGHCPQV 228
+ + GH Q+
Sbjct: 292 HIEDCGHWTQM 302
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 52.1 bits (123), Expect = 1e-08
Identities = 40/232 (17%), Positives = 81/232 (34%), Gaps = 32/232 (13%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+K +RV + D++G+G++D+P ++ + + ++A + N+
Sbjct: 49 LSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIG------IMDALEIEKAHIVGNAF 102
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG + + A+ E M+L+ + + + +
Sbjct: 103 GGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNA--------------------VWG 142
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI------CYSGGPL 176
+ E++RN+L D S VT+EL + ++ G + F
Sbjct: 143 YTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALAS 202
Query: 177 PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
+E + + LI G +D P+ G V GH Q+
Sbjct: 203 SDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQI 254
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 52.1 bits (123), Expect = 1e-08
Identities = 42/229 (18%), Positives = 70/229 (30%), Gaps = 22/229 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +RV D G+ N D A + + D+A + N++
Sbjct: 57 VDAGYRVILKDSPGF------NKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAM 110
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG L A+ P+ +IL+ P P+ LL A +
Sbjct: 111 GGATALNFALEYPDRIGKLILMGPGGLG------PSMFAPMPMEGIKLLFKLYAEPSYET 164
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGL---ETGAADVFLEFICYSGGPLPEE 179
+ + +L D S +TEEL++ + E +
Sbjct: 165 L-------KQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTA 217
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
L ++K I WG D + P++ G V GH Q
Sbjct: 218 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQW 266
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 50.5 bits (120), Expect = 5e-08
Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 12/82 (14%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+VY ++ S+ E Q+ + + + I +S G
Sbjct: 37 RDGAQVYVTEVSQLDTSE------------VRGEQLLQQVEEIVALSGQPKVNLIGHSHG 84
Query: 64 GLVGLQAAVMEPEICRGMILLN 85
G A + P++ +
Sbjct: 85 GPTIRYVAAVRPDLIASATSVG 106
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 49.9 bits (117), Expect = 9e-08
Identities = 30/245 (12%), Positives = 60/245 (24%), Gaps = 25/245 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ ++V D G G S T + + + +Q S
Sbjct: 57 DPERYKVLLFDQRGCGRSR-----PHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSW 111
Query: 63 GGLVGLQAAVMEPEICRGMILLNISL----------RMLHIKKQPWYGRPLIRSFQNLLR 112
G + L A PE M+L I + + P ++ + R
Sbjct: 112 GSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDER 171
Query: 113 NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFIC-- 170
++ + V+ + ++ T L+ + I
Sbjct: 172 KDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENH 231
Query: 171 --------YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNV 222
S L + P +I G D ++ + ++
Sbjct: 232 YFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGA 291
Query: 223 GHCPQ 227
GH
Sbjct: 292 GHSYD 296
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 48.7 bits (114), Expect = 2e-07
Identities = 34/227 (14%), Positives = 63/227 (27%), Gaps = 22/227 (9%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+ ++ +DL G+G S D + K + + +
Sbjct: 34 LSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQA------PDKAIWLGWSLGGLVAS 87
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
Q A+ PE R ++ + S + P ++ FQ L + +
Sbjct: 88 ------QIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVE-- 139
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
R + Q + + K L DV + + L
Sbjct: 140 --------RFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQ 191
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
V P L +G D P ++ + + H P +S
Sbjct: 192 NVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFIS 238
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 47.6 bits (111), Expect = 5e-07
Identities = 32/237 (13%), Positives = 57/237 (24%), Gaps = 17/237 (7%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
V D G + F Y F A+ D+A + S+
Sbjct: 47 ADGGLHVIRYDHRDTGR----STTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSM 102
Query: 63 GGLVGLQAAVMEPEICRGMILLNIS------------LRMLHIKKQPWYGRPLIRSFQNL 110
G + A+ + + +L + G
Sbjct: 103 GATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALA 162
Query: 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFIC 170
L N A ++ R + E+ + A+ + +
Sbjct: 163 LMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGV-LAEPYAHYSL 221
Query: 171 YSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQ 227
P L +V P L+ + DP P G+ +P +GH
Sbjct: 222 TLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALP 278
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 46.0 bits (107), Expect = 2e-06
Identities = 27/229 (11%), Positives = 60/229 (26%), Gaps = 7/229 (3%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
A R+ + DLIG G SDK +P + + + D+ + +
Sbjct: 51 CAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEH--RDYLDALWEALDLGDRVVLVVHDW 108
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
G +G A E +G+ + + P R L ++F++ +
Sbjct: 109 GSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVF 168
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFIC---YSGGPLPEE 179
+ + + L + + + + +
Sbjct: 169 VEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAG 228
Query: 180 LLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
L + P L + + + + + H Q
Sbjct: 229 WLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQT--EITVAGAHFIQE 275
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 45.8 bits (107), Expect = 2e-06
Identities = 30/247 (12%), Positives = 59/247 (23%), Gaps = 31/247 (12%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+ L GY +S P + A ++ KD+ + I
Sbjct: 137 TLPFHLVVPSLPGYTFSSGPP-----LDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDI 191
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM 123
G + + + C+ + L ++R + + L Y
Sbjct: 192 GSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAY-A 250
Query: 124 VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI-------------- 169
+ S I + + + EK LQ + ++ LE +
Sbjct: 251 MEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIH 310
Query: 170 ----CYSGGPLPEEL-----LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP 220
P + P ++ KD ++ F
Sbjct: 311 TYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR--SWIATTGNLVFFRDHA 368
Query: 221 NVGHCPQ 227
GH
Sbjct: 369 EGGHFAA 375
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 45.3 bits (105), Expect = 2e-06
Identities = 33/227 (14%), Positives = 72/227 (31%), Gaps = 12/227 (5%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA++ V + DL G+ P + Q+ +++ + NS+
Sbjct: 52 LAENFFVVAPDL--IGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSM 109
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG V LQ V PE + L+ ++ + + L F
Sbjct: 110 GGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVY 169
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+ I+ + + +++++ ++ G + +
Sbjct: 170 DPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATL----------G 219
Query: 183 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
++ VL+ G +D P++ + +VL GH Q+
Sbjct: 220 RLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLE 266
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 43.8 bits (101), Expect = 9e-06
Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 8/231 (3%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ + V DL G+G S+KP+ D Y+ + A + ++A+ + +
Sbjct: 51 LAEHYDVIVPDLRGFGDSEKPDLNDLS---KYSLDKAADDQAALLDALGIEKAYVVGHDF 107
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
+V + + + + Q + A +
Sbjct: 108 AAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSS 167
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGP----LPE 178
+ ++ +TEE +E + ++ + + P +
Sbjct: 168 REVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTD 227
Query: 179 ELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQV 228
PV + WG D P L + S + + GH V
Sbjct: 228 LDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMV 278
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 43.7 bits (101), Expect = 1e-05
Identities = 33/243 (13%), Positives = 57/243 (23%), Gaps = 48/243 (19%)
Query: 1 MVLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV--KDQAFFI 58
L K + Y ID G G S D+ +A +
Sbjct: 87 YFLRKGYSTYVIDQSGRGRSATDISA-------INAVKLGKAPASSLPDLFAAGHEAAWA 139
Query: 59 CNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK 118
G + + L + P + + + +
Sbjct: 140 IFRFGPRYPDAFKDTQFPVQAQAELWQQMV--------PDWLGSMPTPNPTVANLSKLAI 191
Query: 119 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE 178
V S S I T+ + + + I+ P PE
Sbjct: 192 KLDGTVLLSHSQSGIYPF---QTAAMNPKGITAIVSV--------------EPGECPKPE 234
Query: 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE---------DFIVLPNV-----GH 224
++ P PVL+ +GD P R ++ + LP + H
Sbjct: 235 DVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSH 294
Query: 225 CPQ 227
Sbjct: 295 MMM 297
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 40.7 bits (93), Expect = 8e-05
Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 13/228 (5%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
A+ +RV + D G+G S +P + D L+ + F ++
Sbjct: 43 AAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQLIEHLDLRDAVL------FGFSTG 96
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG V L++ ++ + G P+ + A YK
Sbjct: 97 GGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYK 156
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
+A ++ + +V+ G+ G + + +S E+L
Sbjct: 157 DLA-----SGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDL-K 210
Query: 183 QVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVEDFIVLPNVGHCPQVS 229
++ P L+ GD D PIE G A + H +
Sbjct: 211 KIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDT 258
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 40.7 bits (94), Expect = 9e-05
Identities = 22/227 (9%), Positives = 53/227 (23%), Gaps = 49/227 (21%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICN 60
V+ D + + + + +T T + L + I
Sbjct: 57 TNGFHVFRYDSLHHVGLSSGSIDE------FTMTTGKNSLCTVYHWLQTKGTQNIGLIAA 110
Query: 61 SIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLF 120
S+ V + + E+ + + + ++K + +
Sbjct: 111 SLSARVAYEVI-SDLELSFLITAVGVVNLRDTLEKALGFDYLSLPI-------------- 155
Query: 121 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEEL 180
++ +L + + G E D F L +
Sbjct: 156 ---------------------DELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTL--DK 192
Query: 181 LPQVKCPVLIAWGDKDPWEPIELGRA-YGNFDS-VEDFIVLPNVGHC 225
+ P++ + D W E + + L H
Sbjct: 193 VANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHD 239
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.3 bits (92), Expect = 1e-04
Identities = 30/230 (13%), Positives = 59/230 (25%), Gaps = 10/230 (4%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ V D G + F K ++ F + +S
Sbjct: 49 TKEGITVLFYDQFGC-----GRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSY 103
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKK--QPWYGRPLIRSFQNLLRNTAAGKLF 120
GG + L AV + +G+I+ + K + + + ++G
Sbjct: 104 GGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYE 163
Query: 121 YKMV--ATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE 178
A + L + + +V + L +
Sbjct: 164 NPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDIT 223
Query: 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQV 228
+ + +K P LI G+ D P + E V + H
Sbjct: 224 DKISAIKIPTLITVGEYDEVTPNVARVIHEKIAGSE-LHVFRDCSHLTMW 272
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 40.3 bits (92), Expect = 1e-04
Identities = 38/228 (16%), Positives = 68/228 (29%), Gaps = 13/228 (5%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+ +RV + D G+ D A ++ ++
Sbjct: 45 LSHGYRVIAHDRRGH------GRSDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTG 98
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG V A EP +L++ ++ G PL + A FY
Sbjct: 99 GGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYI 158
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
V + + V++ L++ G+ GAA+ E I + L
Sbjct: 159 DVP-----SGPFYGFNREGATVSQGLIDHWWLQGM-MGAANAHYECIAAFSETDFTDDLK 212
Query: 183 QVKCPVLIAWGDKDPWEPI-ELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
++ PVL+A G D P + + + H +
Sbjct: 213 RIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLST 260
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 39.9 bits (91), Expect = 2e-04
Identities = 7/51 (13%), Positives = 15/51 (29%), Gaps = 1/51 (1%)
Query: 178 EELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGHCPQ 227
+A G KD ++ + + + + + GH Q
Sbjct: 242 SFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQ 292
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 39.7 bits (92), Expect = 2e-04
Identities = 13/117 (11%), Positives = 26/117 (22%), Gaps = 23/117 (19%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+ I + +D E + + ++ + S G
Sbjct: 58 QLGYTPCWISPPPFMLNDTQV----------NTEYMVNAITALYAGSGNNKLPVLTWSQG 107
Query: 64 GLVGLQAAVMEPEI---CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG 117
GLV P I ++ + G L L + +
Sbjct: 108 GLVAQWGLTFFPSIRSKVDRLMAFAP----------DYKGTVLAGPLDALAVSAPSV 154
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 39.1 bits (89), Expect = 3e-04
Identities = 34/230 (14%), Positives = 64/230 (27%), Gaps = 17/230 (7%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L +RV + D G+G S +P +D T L+ +V +
Sbjct: 47 LDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVA- 105
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
+ + L L G F ++ A + +
Sbjct: 106 -----RYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFY 160
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE--EL 180
YN + + E+ ++ T A+ F +
Sbjct: 161 T--------GFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRAD 212
Query: 181 LPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQVS 229
+P++ P LI G D PIE R + +++ + H +
Sbjct: 213 IPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWT 262
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 38.3 bits (87), Expect = 4e-04
Identities = 26/228 (11%), Positives = 60/228 (26%), Gaps = 21/228 (9%)
Query: 3 LAKSH-RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
LA++ ++DL G+ + + + + S
Sbjct: 39 LARTQCAALTLDLPGH------GTNPERHCDNFAEAVEMIEQTVQAHVTSEVPVILVGYS 92
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFY 121
+GG + + + I +++ Q R +
Sbjct: 93 LGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHV 152
Query: 122 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 181
++V + L + + L+ + + A L + P L
Sbjct: 153 LSDWYQQAVFSSLNH------EQRQTLIAQRSANLGSSVAH--MLLATSLAKQPYLLPAL 204
Query: 182 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229
+K P+ G++D +L + G + + GH
Sbjct: 205 QALKLPIHYVCGEQDSKFQ-QLAESSGL-----SYSQVAQAGHNVHHE 246
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 38.0 bits (86), Expect = 7e-04
Identities = 32/228 (14%), Positives = 60/228 (26%), Gaps = 11/228 (4%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ +RV + D G+G S K N +D T D V+ +
Sbjct: 47 LAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLET-LDLRDVVLVGFSMGTGELA 105
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
+ + + + R + + P I + R +
Sbjct: 106 RYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKN 165
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
E++ + + + A + E +
Sbjct: 166 FYNLDENLGSRISEQAVT---------GSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVR 216
Query: 183 QVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQVS 229
P LI G KD PI+ R + D++ + H +
Sbjct: 217 AAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWT 264
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 37.2 bits (84), Expect = 0.001
Identities = 31/227 (13%), Positives = 60/227 (26%), Gaps = 14/227 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+ +R + D G+G+S FD + L+ + +S+
Sbjct: 43 VDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDLLTDLDLRD-------VTLVAHSM 95
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122
GG + +L ++ + IK F L + +
Sbjct: 96 GGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFW 155
Query: 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLP 182
++VT+ + + + E+ L
Sbjct: 156 KD-----TAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTED-LK 209
Query: 183 QVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQV 228
+ P L+ GD D PI+ GR + V H +
Sbjct: 210 KFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAM 256
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 260 | |||
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.98 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.98 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.97 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.97 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.97 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.96 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.96 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.96 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.95 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.95 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.94 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.94 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.91 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.91 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.91 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.91 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.89 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.89 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.87 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.86 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.84 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.82 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.82 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.79 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.78 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.78 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.77 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.73 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.71 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.71 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.68 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.64 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.63 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.61 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.61 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.6 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.57 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.57 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.56 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.55 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.54 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.49 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.48 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.47 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.4 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.3 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.23 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.2 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.08 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.02 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.02 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.97 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 98.97 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.88 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.85 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 98.82 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.7 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.7 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.69 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 98.67 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.67 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.59 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.47 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.45 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.42 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.39 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.36 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.3 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.14 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.13 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 97.97 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 97.2 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 97.19 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 97.14 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 97.13 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 97.08 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 96.94 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 96.38 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 95.33 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 94.86 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 93.9 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 93.56 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 92.39 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 91.98 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 91.97 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 91.61 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 90.79 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 90.25 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 88.17 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 87.73 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 83.91 | |
| d1mlaa1 | 235 | Catalytic domain of malonyl-CoA ACP transacylase F | 82.13 |
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=2.4e-35 Score=212.53 Aligned_cols=215 Identities=21% Similarity=0.353 Sum_probs=144.6
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCC-ceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD-QAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+.+. ...+.+++++++.+++++++.+ +++++||||||.+++.+|.++|++|++
T Consensus 47 ~l~~~~~v~~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~ 119 (268)
T d1j1ia_ 47 ILARHYRVIAMDMLGFGKTAKPD-------IEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNA 119 (268)
T ss_dssp HHTTTSEEEEECCTTSTTSCCCS-------SCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEE
T ss_pred HHhcCCEEEEEcccccccccCCc-------cccccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhhe
Confidence 46789999999999999998765 5678999999999999999874 789999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|++++.......... +....... ....................................
T Consensus 120 lil~~~~~~~~~~~~~----------~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (268)
T d1j1ia_ 120 LVLMGSAGLVVEIHED----------LRPIINYD----------FTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEA 179 (268)
T ss_dssp EEEESCCBCCCC--------------------CC----------SCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHH
T ss_pred eeecCCCccccccchh----------hhhhhhhh----------hhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhh
Confidence 9999986533211100 00000000 000011111111111111111111111111111111
Q ss_pred h----HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHH
Q 024971 161 A----ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 161 ~----~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
. .................+.++++++|+++|+|++|.++|++..+.+.+.+|++++++++++||++++|+|+++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 259 (268)
T d1j1ia_ 180 TRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFAN 259 (268)
T ss_dssp HHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHH
T ss_pred hhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHH
Confidence 1 111111111222222245578899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh
Q 024971 237 ACLHTLS 243 (260)
Q Consensus 237 ~i~~~l~ 243 (260)
.|.+||.
T Consensus 260 ~i~~FL~ 266 (268)
T d1j1ia_ 260 ATLSFLS 266 (268)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9999986
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=4.7e-35 Score=212.66 Aligned_cols=223 Identities=18% Similarity=0.147 Sum_probs=150.1
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
+++||+|+++|+||||.|..+. ...++...+++++.+++++++.++++++||||||.+++.+|.++|++|+++|
T Consensus 57 ~~~g~~v~~~D~~G~G~S~~~~------~~~~~~~~~~~~i~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~li 130 (283)
T d2rhwa1 57 VDAGYRVILKDSPGFNKSDAVV------MDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLI 130 (283)
T ss_dssp HHTTCEEEEECCTTSTTSCCCC------CSSCHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHCCCEEEEEeCCCCccccccc------ccccccchhhhhcccccccccccccccccccchHHHHHHHHHHhhhhcceEE
Confidence 3579999999999999998766 2456778889999999999999999999999999999999999999999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc-cch
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE-TGA 161 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 161 (260)
+++|......... .........+...... .....................++........... ...
T Consensus 131 l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (283)
T d2rhwa1 131 LMGPGGLGPSMFA--PMPMEGIKLLFKLYAE-----------PSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEH 197 (283)
T ss_dssp EESCSCCCCCSSS--CSSCHHHHHHHHHHHS-----------CCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred EeCCCcCCcchhh--hhhHHHHHHHHHHhhh-----------hhhhhHHHHHHHhhcccccCcHHHHHHHHHHhhhhhhh
Confidence 9998653321110 0111111111111110 1111122222222222222233332222111111 011
Q ss_pred HHHH-HHH-HhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 162 ADVF-LEF-ICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 162 ~~~~-~~~-~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
.... ... .......+....++++++|+++++|++|.+++.+..+.+.+.++++++++++++||+++.|+|+++++.|.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 277 (283)
T d2rhwa1 198 LKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI 277 (283)
T ss_dssp HHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred hhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 1111 111 11111223356678899999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhh
Q 024971 240 HTLSY 244 (260)
Q Consensus 240 ~~l~~ 244 (260)
+||++
T Consensus 278 ~FLk~ 282 (283)
T d2rhwa1 278 DFLRH 282 (283)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 99974
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=5.8e-35 Score=210.83 Aligned_cols=215 Identities=20% Similarity=0.306 Sum_probs=144.5
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ....+.+++++++..++++++.++++++||||||.+++.+|.++|++++++
T Consensus 48 ~l~~~~~vi~~Dl~G~G~S~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~l 121 (271)
T d1uk8a_ 48 ALSKFYRVIAPDMVGFGFTDRPE------NYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRM 121 (271)
T ss_dssp HHTTTSEEEEECCTTSTTSCCCT------TCCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHhCCCEEEEEeCCCCCCccccc------cccccccccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchhe
Confidence 36789999999999999998766 356789999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|++++...... ................. ................................
T Consensus 122 il~~~~~~~~~-------~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (271)
T d1uk8a_ 122 VLMGAAGTRFD-------VTEGLNAVWGYTPSIEN-------------MRNLLDIFAYDRSLVTDELARLRYEASIQPGF 181 (271)
T ss_dssp EEESCCCSCCC-------CCHHHHHHHTCCSCHHH-------------HHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTH
T ss_pred eecccCCCccc-------chhhhhhhhhccchhHH-------------HHHHHHHHhhhcccchhHHHHHHHhhhhchhH
Confidence 99998653211 00001111000000000 00011110111111111111111000000000
Q ss_pred HHHHH--------HHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhH
Q 024971 162 ADVFL--------EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLS 233 (260)
Q Consensus 162 ~~~~~--------~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 233 (260)
...+. ...... ....+.++++++|+++++|++|.++|.+..+.+.+.++++++++++++||+++.|+|++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~ 259 (271)
T d1uk8a_ 182 QESFSSMFPEPRQRWIDAL--ASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDR 259 (271)
T ss_dssp HHHHHTTSCSSTHHHHHHH--CCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHTHHH
T ss_pred HHHHHhhcchhhhhhhhhc--cccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHH
Confidence 00000 000000 11134577899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhh
Q 024971 234 LSSACLHTLSY 244 (260)
Q Consensus 234 ~~~~i~~~l~~ 244 (260)
+++.|.+||++
T Consensus 260 ~~~~i~~Fl~e 270 (271)
T d1uk8a_ 260 FNRLVVEFFNE 270 (271)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999999975
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=3.5e-35 Score=214.78 Aligned_cols=225 Identities=14% Similarity=0.085 Sum_probs=142.7
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
+++||+|+++|+||||.|+..... ...++++++++|+..++++++.++++++||||||.+++.+|.++|++|+++|
T Consensus 47 ~~~g~~vi~~D~~G~G~S~~~~~~----~~~~~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lv 122 (297)
T d1q0ra_ 47 ADGGLHVIRYDHRDTGRSTTRDFA----AHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLT 122 (297)
T ss_dssp HTTTCEEEEECCTTSTTSCCCCTT----TSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred HhCCCEEEEEeCCCCccccccccc----ccccccchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeE
Confidence 357999999999999999765421 2457999999999999999999999999999999999999999999999999
Q ss_pred EeccCcccccc-----------CCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcCh----HHHHHH---HHhccCCCCcc
Q 024971 83 LLNISLRMLHI-----------KKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATS----ESVRNI---LCQCYNDTSQV 144 (260)
Q Consensus 83 l~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~ 144 (260)
++++....... ............... ......... ...... ...........
T Consensus 123 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (297)
T d1q0ra_ 123 MLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLD----------ALALMNQPAEGRAAEVAKRVSKWRILSGTGVPF 192 (297)
T ss_dssp EESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHH----------HHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCC
T ss_pred EEccccccccchhhhHHHhhhhhhhhhhhhhhHHHHH----------HHHHhccccchhhHHHHHHHHHHhhhccccccc
Confidence 99886532110 000000000000000 000000000 000000 00000111111
Q ss_pred cHHHHHHHh----ccC--CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEE
Q 024971 145 TEELVEKIL----QPG--LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIV 218 (260)
Q Consensus 145 ~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 218 (260)
......... ... ....... .........+....+++|++|+++|+|++|.+++++..+.+.+.+|++++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~~~~~~ 269 (297)
T d1q0ra_ 193 DDAEYARWEERAIDHAGGVLAEPYA---HYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAE 269 (297)
T ss_dssp CHHHHHHHHHHHHHHTTTCCSCCCG---GGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEE
T ss_pred hHHHHHHHHHHhhhhccccchhhhh---hhhhhhccccchhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 111111100 000 0000000 0000001112234578899999999999999999999999999999999999
Q ss_pred eCCCCCCcchhchhHHHHHHHHhhhh
Q 024971 219 LPNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 219 ~~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
++++||+++.|+|+++++.|.+|++.
T Consensus 270 i~~~gH~~~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 270 IPGMGHALPSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp ETTCCSSCCGGGHHHHHHHHHHHHHH
T ss_pred ECCCCCcchhhCHHHHHHHHHHHHHh
Confidence 99999999999999999999999974
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=3.8e-34 Score=208.67 Aligned_cols=235 Identities=13% Similarity=0.074 Sum_probs=150.2
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+...... ...++++++++|+.+++++++.++++++||||||.+++.+|.++|+++.++
T Consensus 50 ~l~~~~~vi~~D~~G~G~s~~~~~~~---~~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 126 (293)
T d1ehya_ 50 PLAEHYDVIVPDLRGFGDSEKPDLND---LSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKA 126 (293)
T ss_dssp HHHTTSEEEEECCTTSTTSCCCCTTC---GGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEE
T ss_pred HHhcCCEEEEecCCcccCCccccccc---cccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCcccccee
Confidence 36789999999999999998755311 245688999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcCh----HHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATS----ESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
|++++............ ................ ......... ..+...+............+....+.....
T Consensus 127 vl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (293)
T d1ehya_ 127 AIFDPIQPDFGPVYFGL--GHVHESWYSQFHQLDM--AVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCM 202 (293)
T ss_dssp EEECCSCTTC-------------CCHHHHHTTCHH--HHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHT
T ss_pred eeeeccCccccchhhhh--hhhhhhhhhhhhccch--hhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccc
Confidence 99998653221110000 0000000000000000 000011111 112223333333333444455454444333
Q ss_pred ccchHHHHHHHHhhhCC----CCCCccCCCCCCCEEEEecCCCCCCChHHHH-HhhccCCCccEEEeCCCCCCcchhchh
Q 024971 158 ETGAADVFLEFICYSGG----PLPEELLPQVKCPVLIAWGDKDPWEPIELGR-AYGNFDSVEDFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~~~p~ 232 (260)
...........+..... .........+++|+++|+|++|.+++.+... .+.+..+++++++++++||++++|+|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe 282 (293)
T d1ehya_ 203 KPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPE 282 (293)
T ss_dssp STTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHH
T ss_pred cchhhhhhhhhhhhccccchhhhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHH
Confidence 33333333322222111 1112234567899999999999999877654 466678999999999999999999999
Q ss_pred HHHHHHHHhhh
Q 024971 233 SLSSACLHTLS 243 (260)
Q Consensus 233 ~~~~~i~~~l~ 243 (260)
++++.|.+|++
T Consensus 283 ~~~~~I~~Ffr 293 (293)
T d1ehya_ 283 IAIDRIKTAFR 293 (293)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhhC
Confidence 99999999974
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=3.9e-34 Score=207.60 Aligned_cols=223 Identities=18% Similarity=0.225 Sum_probs=144.3
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+....... ....+++++++++.+++++++.++++++||||||.+++.+|.++|++|+++
T Consensus 51 ~L~~~~~vi~~D~~G~G~S~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 128 (281)
T d1c4xa_ 51 DLAENFFVVAPDLIGFGQSEYPETYPG--HIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKV 128 (281)
T ss_dssp HHHTTSEEEEECCTTSTTSCCCSSCCS--SHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHhCCCEEEEEeCCCCccccccccccc--cchhhHHHhhhhccccccccccccceeccccccccccccccccccccccce
Confidence 367899999999999999987653110 112457788999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCc--ccHHHHHHHhccCCcc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ--VTEELVEKILQPGLET 159 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 159 (260)
|++++...... ........+......... ......+......... ................
T Consensus 129 vli~~~~~~~~------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (281)
T d1c4xa_ 129 ALMGSVGAPMN------ARPPELARLLAFYADPRL-----------TPYRELIHSFVYDPENFPGMEEIVKSRFEVANDP 191 (281)
T ss_dssp EEESCCSSCCS------SCCHHHHHHHTGGGSCCH-----------HHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCH
T ss_pred EEeccccCccc------cchhHHHHHHHhhhhccc-----------chhhhhhhhhcccccccchhhhHHHHHhhhcccc
Confidence 99998643211 011111111111111110 1111111111111111 1111111111110000
Q ss_pred chHHHHHHHHhhh-----CCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHH
Q 024971 160 GAADVFLEFICYS-----GGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSL 234 (260)
Q Consensus 160 ~~~~~~~~~~~~~-----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 234 (260)
............. ........+.++++|+|+++|++|.++|++..+.+.+.++++++++++++||++++|+|+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 271 (281)
T d1c4xa_ 192 EVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAM 271 (281)
T ss_dssp HHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHSHHHH
T ss_pred hhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHH
Confidence 0001111111110 11122345678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh
Q 024971 235 SSACLHTLS 243 (260)
Q Consensus 235 ~~~i~~~l~ 243 (260)
++.|.+||+
T Consensus 272 ~~~i~~Fl~ 280 (281)
T d1c4xa_ 272 GPMLMEHFR 280 (281)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 999999986
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.9e-34 Score=203.91 Aligned_cols=221 Identities=18% Similarity=0.180 Sum_probs=140.8
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+... ..++.+++ +.+..+..++++++||||||.+++.+|.++|++++++
T Consensus 33 ~L~~~~~vi~~D~~G~G~S~~~~--------~~~~~d~~----~~~~~~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l 100 (256)
T d1m33a_ 33 ELSSHFTLHLVDLPGFGRSRGFG--------ALSLADMA----EAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRAL 100 (256)
T ss_dssp HHHTTSEEEEECCTTSTTCCSCC--------CCCHHHHH----HHHHTTSCSSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HHhCCCEEEEEeCCCCCCccccc--------cccccccc----cccccccccceeeeecccchHHHHHHHHhCCccccee
Confidence 36789999999999999998654 34554443 4445566789999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcc--cHHHHHHHhccCCcc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQV--TEELVEKILQPGLET 159 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 159 (260)
+++++.+..................+....... .......+........... ............. .
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 168 (256)
T d1m33a_ 101 VTVASSPCFSARDEWPGIKPDVLAGFQQQLSDD-----------QQRTVERFLALQTMGTETARQDARALKKTVLALP-M 168 (256)
T ss_dssp EEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHH-----------HHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSC-C
T ss_pred eeeecccccccchhhhhhHHHHHHHHHhhhhhh-----------hHHHHHHHhhhhhccccchhhHHHHHHHhhhhcc-h
Confidence 999876543322222111111111111111000 0011111111111111111 1111111111111 1
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACL 239 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 239 (260)
.....+..........+..+.++++++|+++|+|++|.++|.+..+.+.+..|++++++++++||++++|+|+++++.|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 248 (256)
T d1m33a_ 169 PEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLV 248 (256)
T ss_dssp CCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred hhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHHCHHHHHHHHH
Confidence 12222222222222233456788999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhcc
Q 024971 240 HTLSYLH 246 (260)
Q Consensus 240 ~~l~~~~ 246 (260)
+|++++.
T Consensus 249 ~fl~~ig 255 (256)
T d1m33a_ 249 ALKQRVG 255 (256)
T ss_dssp HHHTTSC
T ss_pred HHHHHcC
Confidence 9999875
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=1.8e-34 Score=210.27 Aligned_cols=229 Identities=20% Similarity=0.228 Sum_probs=150.5
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.++.++|++++++
T Consensus 51 ~L~~~~~vi~~d~~G~G~S~~~~-------~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~l 123 (291)
T d1bn7a_ 51 HVAPSHRCIAPDLIGMGKSDKPD-------LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI 123 (291)
T ss_dssp HHTTTSCEEEECCTTSTTSCCCS-------CCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHhcCCEEEEEeCCCCccccccc-------cccchhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeee
Confidence 46789999999999999998765 57899999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
+++++........... .................. ................. ...........+.........
T Consensus 124 i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (291)
T d1bn7a_ 124 ACMEFIRPIPTWDEWP----EFARETFQAFRTADVGRE--LIIDQNAFIEGVLPKCV--VRPLTEVEMDHYREPFLKPVD 195 (291)
T ss_dssp EEEEECCCBCSGGGSC----HHHHHHHHHHTSTTHHHH--HHTTSCHHHHTHHHHTC--SSCCCHHHHHHHHGGGSSGGG
T ss_pred eeeccccCCccchhhh----hhhhhHHHHHhhhhhHHH--hhhhhhhhHHhhhhhhc--cccchHHHHHHHHHHhcchhh
Confidence 9998765432111111 001111111111110000 00011111111111111 111222222333222222222
Q ss_pred HHHHHHHHhhhCCCC-----------CCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhc
Q 024971 162 ADVFLEFICYSGGPL-----------PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSL 230 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~-----------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 230 (260)
............... ....++++++|+++++|++|.++|++..+.+.+.++++++++++++||+++.|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 275 (291)
T d1bn7a_ 196 REPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDN 275 (291)
T ss_dssp GHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCGGGTC
T ss_pred hHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhC
Confidence 222221111111000 012346789999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhhhhc
Q 024971 231 YLSLSSACLHTLSYL 245 (260)
Q Consensus 231 p~~~~~~i~~~l~~~ 245 (260)
|+++++.|.+||+.+
T Consensus 276 p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 276 PDLIGSEIARWLPGL 290 (291)
T ss_dssp HHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999875
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2.2e-33 Score=202.99 Aligned_cols=224 Identities=18% Similarity=0.184 Sum_probs=141.3
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhh-HHHHHHHhhCccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGG-LVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg-~~a~~~a~~~p~~v~~lv 82 (260)
++||+|+++|+||||.|+... ..++++++++|+.+++++++.++++++|||||| .++..++..+|++|+++|
T Consensus 48 ~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lv 120 (277)
T d1brta_ 48 DAGYRVITYDRRGFGQSSQPT-------TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVA 120 (277)
T ss_dssp HTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEE
T ss_pred hCCCEEEEEeCCCCCcccccc-------cccchhhhhhhhhhhhhccCcccccccccccchhhhhHHHHHhhhcccceEE
Confidence 478999999999999998655 568999999999999999999999999999996 566667888899999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC----CCCcccHHHHHHHhccCCc
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN----DTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 158 (260)
++++................................ ............. ...................
T Consensus 121 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (277)
T d1brta_ 121 FLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADR--------YAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAAS 192 (277)
T ss_dssp EESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCH--------HHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHH
T ss_pred EecCCCcccccchhhhhhhhhhhHHHHHHHhhhccc--------hhhhhhccccccccchhhhhhhhHHHhhhhhcccch
Confidence 999865332211111111111111111110000000 0000011100000 0111112222211111111
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH-HHHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
........ .......+....++++++|+++++|++|.+++.+. .+.+.+..|++++++++++||+++.|+|+++++.
T Consensus 193 ~~~~~~~~--~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 270 (277)
T d1brta_ 193 GGFFAAAA--APTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTA 270 (277)
T ss_dssp SCHHHHHH--GGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHH
T ss_pred hhhhhhhh--hhhhhhhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHH
Confidence 11111111 11112223356678899999999999999998765 4667778999999999999999999999999999
Q ss_pred HHHhhhh
Q 024971 238 CLHTLSY 244 (260)
Q Consensus 238 i~~~l~~ 244 (260)
|.+||++
T Consensus 271 i~~fL~k 277 (277)
T d1brta_ 271 LLAFLAK 277 (277)
T ss_dssp HHHHHHC
T ss_pred HHHHHCc
Confidence 9999963
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=3e-35 Score=214.11 Aligned_cols=224 Identities=14% Similarity=0.137 Sum_probs=141.1
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-cCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
+++||+|+++|+||||.|+.+. ...++++++++|+.++++++ +.++++++||||||.+++.+|.++|++|+++
T Consensus 49 ~~~~~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 122 (290)
T d1mtza_ 49 TKEGITVLFYDQFGCGRSEEPD------QSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGL 122 (290)
T ss_dssp GGGTEEEEEECCTTSTTSCCCC------GGGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEE
T ss_pred HHCCCEEEEEeCCCCccccccc------cccccccchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheee
Confidence 4679999999999999998765 35789999999999999998 6889999999999999999999999999999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhh-----HHHHHHHh-cChH----HHHHHHHhccCCCCcccHHHHHH
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA-----GKLFYKMV-ATSE----SVRNILCQCYNDTSQVTEELVEK 151 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
+++++...... .............. ........ .... .................+.....
T Consensus 123 vl~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (290)
T d1mtza_ 123 IVSGGLSSVPL----------TVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKS 192 (290)
T ss_dssp EEESCCSBHHH----------HHHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHH
T ss_pred eecccccCccc----------chhhhhhhhhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHH
Confidence 99998643210 00001110000000 00000000 0000 11111111111122222222211
Q ss_pred HhccCCccchHHHHHHH-----HhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCc
Q 024971 152 ILQPGLETGAADVFLEF-----ICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 226 (260)
Q Consensus 152 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 226 (260)
...... .......... .......+....++++++|+++++|++|.++| +..+.+.+.++++++++++++||++
T Consensus 193 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~ 270 (290)
T d1mtza_ 193 LEYAER-RNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLT 270 (290)
T ss_dssp HHHHHH-SSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTCSSCH-HHHHHHHHHSTTCEEEEETTCCSCH
T ss_pred HHHHhh-hhhhhhhcchhHHhHhhhhhcccHHHHhhcccceEEEEEeCCCCCCH-HHHHHHHHHCCCCEEEEECCCCCch
Confidence 110000 0000000000 00001112234567789999999999998765 6677888889999999999999999
Q ss_pred chhchhHHHHHHHHhhhh
Q 024971 227 QVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 227 ~~~~p~~~~~~i~~~l~~ 244 (260)
+.|+|+++++.|.+||++
T Consensus 271 ~~e~p~~~~~~i~~FL~~ 288 (290)
T d1mtza_ 271 MWEDREGYNKLLSDFILK 288 (290)
T ss_dssp HHHSHHHHHHHHHHHHHT
T ss_pred HHhCHHHHHHHHHHHHHH
Confidence 999999999999999964
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=7.8e-33 Score=199.84 Aligned_cols=227 Identities=17% Similarity=0.124 Sum_probs=142.7
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhh-Cccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVM-EPEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lv 82 (260)
++||+|+++|+||||.|+.+. ..++..++++|+.+++++++.++++++||||||.+++.++++ .|++|++++
T Consensus 44 ~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~ 116 (274)
T d1a8qa_ 44 DAGYRGIAHDRRGHGHSTPVW-------DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAV 116 (274)
T ss_dssp HTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEE
T ss_pred HCCCEEEEEeCCCCccccccc-------ccccchhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEE
Confidence 479999999999999998765 568999999999999999999999999999999999887655 589999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchH
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
++++.+......... .................... ..........+.... .............+........ .
T Consensus 117 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~ 189 (274)
T d1a8qa_ 117 LLSAIPPVMIKSDKN--PDGVPDEVFDALKNGVLTER---SQFWKDTAEGFFSAN-RPGNKVTQGNKDAFWYMAMAQT-I 189 (274)
T ss_dssp EESCCCSCCBCCSSC--TTSBCHHHHHHHHHHHHHHH---HHHHHHHHHHHTTTT-STTCCCCHHHHHHHHHHHTTSC-H
T ss_pred EEeccCccchhhhhc--cchhhHHHHHHHHhhhhhhh---HHHhhhhhhhhhhcc-ccchhhhhhHHHHHHHhhhccc-h
Confidence 999765432211111 11111111111110000000 000000111111111 1111222222222222212211 1
Q ss_pred HHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHH-HHhhccCCCccEEEeCCCCCCcch--hchhHHHHHHH
Q 024971 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQV--SLYLSLSSACL 239 (260)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~--~~p~~~~~~i~ 239 (260)
.............+..+.++++++|+++|+|++|.+++.+.. +.+.+.+|++++++++++||++++ ++|+++++.|.
T Consensus 190 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~ 269 (274)
T d1a8qa_ 190 EGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLL 269 (274)
T ss_dssp HHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHH
T ss_pred hhhhhHHHHhhccchHHHHHhccceeeeeccCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHH
Confidence 112222221222233456788999999999999999998654 567777899999999999998776 67999999999
Q ss_pred Hhhhh
Q 024971 240 HTLSY 244 (260)
Q Consensus 240 ~~l~~ 244 (260)
+||++
T Consensus 270 ~FL~k 274 (274)
T d1a8qa_ 270 EFLNK 274 (274)
T ss_dssp HHHTC
T ss_pred HHHCc
Confidence 99864
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=8.6e-34 Score=205.45 Aligned_cols=228 Identities=18% Similarity=0.167 Sum_probs=140.3
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhh-HHHHHHHhhCccchhhc
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGG-LVGLQAAVMEPEICRGM 81 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg-~~a~~~a~~~p~~v~~l 81 (260)
+++||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++|||||| .++..+|..+|++|.++
T Consensus 47 ~~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~di~~~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~l 119 (279)
T d1hkha_ 47 LAQGYRVITYDRRGFGGSSKVN-------TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKL 119 (279)
T ss_dssp HHTTEEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEE
T ss_pred HHCCCEEEEEechhhCCccccc-------cccchhhhhhhhhhhhhhcCcCccccccccccccchhhhhcccccccccee
Confidence 3689999999999999998765 568999999999999999999999999999996 66777788889999999
Q ss_pred eEeccCccccccCCCCCC--CcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 82 ILLNISLRMLHIKKQPWY--GRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
+++++............. .......+........ ...+.. .................+.............
T Consensus 120 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (279)
T d1hkha_ 120 AFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDR-FAWFTD------FYKNFYNLDENLGSRISEQAVTGSWNVAIGS 192 (279)
T ss_dssp EEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCH-HHHHHH------HHHHHHTHHHHBTTTBCHHHHHHHHHHHHTS
T ss_pred EEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhh-hhhhhh------hhhhhcccchhhhhhhhhhhhhhhhhhhccc
Confidence 999876543221111110 1111111111110000 000000 0010000000001112222222211111111
Q ss_pred chHHHHHHHHhhhCC-CCCCccCCCCCCCEEEEecCCCCCCChH-HHHHhhccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 160 GAADVFLEFICYSGG-PLPEELLPQVKCPVLIAWGDKDPWEPIE-LGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
.....+......... ....+.++.+++|+++++|++|.+++.+ ..+.+.+..|++++++++++||+++.|+|+++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~ 272 (279)
T d1hkha_ 193 APVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAA 272 (279)
T ss_dssp CTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHH
T ss_pred chhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHH
Confidence 111111111111100 0002334567899999999999999865 56778888899999999999999999999999999
Q ss_pred HHHhhhh
Q 024971 238 CLHTLSY 244 (260)
Q Consensus 238 i~~~l~~ 244 (260)
|.+||++
T Consensus 273 i~~fl~k 279 (279)
T d1hkha_ 273 LKTFLAK 279 (279)
T ss_dssp HHHHHHC
T ss_pred HHHHHCc
Confidence 9999964
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=2.7e-34 Score=205.25 Aligned_cols=222 Identities=13% Similarity=0.018 Sum_probs=139.1
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhc-CCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVV-KDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
+||+|+++|+||||.|+.+. ...++++++++++.+++++++ .++++++||||||.+++.++.++|++|+++|+
T Consensus 28 ~g~~Via~Dl~G~G~S~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 101 (256)
T d3c70a1 28 LGHKVTALDLAASGVDPRQI------EEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVF 101 (256)
T ss_dssp TTCEEEEECCTTSTTCSCCG------GGCCSHHHHTHHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHHGGGEEEEEE
T ss_pred CCCEEEEEcCCCCCCCCCCC------CCCCCHHHHHHHhhhhhhhhccccceeecccchHHHHHHHHhhcCchhhhhhhe
Confidence 58999999999999998765 256899999999999988875 67899999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHH---H--HHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK---L--FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
+++......... .................. . .......................................
T Consensus 102 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (256)
T d3c70a1 102 HNSVLPDTEHCP-----SYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGS 176 (256)
T ss_dssp ESCCCCCSSSCT-----THHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBC
T ss_pred eccccCCcccch-----hhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhhcchhhHHHhhhhhhhhh
Confidence 997643221100 000000000000000000 0 000000000000000000111100011111111110000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
. .. ..............+++|+++|+|++|.++|++..+.+.+..|++++++++++||++++|+|+++++.|
T Consensus 177 ~-~~-------~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~agH~~~~e~P~~~~~~l 248 (256)
T d3c70a1 177 L-FQ-------NILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEIL 248 (256)
T ss_dssp C-CH-------HHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCCSEEEECCSCCSCHHHHSHHHHHHHH
T ss_pred H-HH-------hhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHH
Confidence 0 00 001111223345567899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhc
Q 024971 239 LHTLSYL 245 (260)
Q Consensus 239 ~~~l~~~ 245 (260)
.+|++..
T Consensus 249 ~~~~~~~ 255 (256)
T d3c70a1 249 QEVADTY 255 (256)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9998764
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=5.2e-33 Score=204.42 Aligned_cols=227 Identities=17% Similarity=0.153 Sum_probs=141.3
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
.+||+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|+
T Consensus 72 ~~~~~vi~~Dl~G~G~S~~~~~-----~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl 146 (310)
T d1b6ga_ 72 ESGARVIAPDFFGFGKSDKPVD-----EEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLII 146 (310)
T ss_dssp HTTCEEEEECCTTSTTSCEESC-----GGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEE
T ss_pred ccCceEEEeeecCccccccccc-----cccccccccccchhhhhhhccccccccccceecccccccchhhhccccceEEE
Confidence 4689999999999999987543 25679999999999999999999999999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHH
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (260)
+++........ ...................................... ..........+...........
T Consensus 147 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 217 (310)
T d1b6ga_ 147 MNACLMTDPVT------QPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWA---PTLTEAEASAYAAPFPDTSYQA 217 (310)
T ss_dssp ESCCCCCCTTT------CTHHHHTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHS---TTCCHHHHHHHHTTCSSGGGCH
T ss_pred EcCccCCCccc------chhHHHHhhcchhhhhhhhhhhccchhhhhhhhhhccC---ccccHHHHHHHHhhcchhhhhh
Confidence 99875332110 00000000000000000000000000000111111110 0111222222222111111111
Q ss_pred HHHHHHhhhCCCC----------CCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCc-cEEEeCCCCCCcchhchh
Q 024971 164 VFLEFICYSGGPL----------PEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVE-DFIVLPNVGHCPQVSLYL 232 (260)
Q Consensus 164 ~~~~~~~~~~~~~----------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~ 232 (260)
....+........ ......++++|+++++|++|.+++++..+.+.+..++. ++++++++||++++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe 297 (310)
T d1b6ga_ 218 GVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQ 297 (310)
T ss_dssp HHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGGGHHH
T ss_pred cchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCccEEEECCCcCchhhhCHH
Confidence 1110000000000 01123467899999999999999999999888887775 788899999999999999
Q ss_pred HHHHHHHHhhhh
Q 024971 233 SLSSACLHTLSY 244 (260)
Q Consensus 233 ~~~~~i~~~l~~ 244 (260)
.+++.|.+||+.
T Consensus 298 ~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 298 VAREALKHFAET 309 (310)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC
Confidence 999999999974
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-33 Score=205.96 Aligned_cols=235 Identities=18% Similarity=0.180 Sum_probs=143.7
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
.+||+|+++|+||||.|+.+.. ...++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|+
T Consensus 57 ~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl 131 (322)
T d1zd3a2 57 QAGYRVLAMDMKGYGESSAPPE-----IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVAS 131 (322)
T ss_dssp HTTCEEEEEECTTSTTSCCCSC-----GGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEE
T ss_pred HCCCEEEEeccccccccccccc-----cccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEE
Confidence 3689999999999999987653 24679999999999999999999999999999999999999999999999999
Q ss_pred eccCccccccCCCCCCC--cchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhc-----------------cC-----
Q 024971 84 LNISLRMLHIKKQPWYG--RPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQC-----------------YN----- 139 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~----- 139 (260)
++++.........+... ....................... .....+....... ..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (322)
T d1zd3a2 132 LNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQ-NLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEP 210 (322)
T ss_dssp ESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTSTTHHHHHHHH-THHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSC
T ss_pred EcccccccccccchhhhhhccchhhhHHhhhccchhhhhhhh-hHHHHHHHHhhccchhhhhHHHHhhhhccccccccch
Confidence 98764332111110000 00000000000000000000000 0000000000000 00
Q ss_pred -CCCcccHHHHHHHhccCCccchHHHHHHHH---hhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCcc
Q 024971 140 -DTSQVTEELVEKILQPGLETGAADVFLEFI---CYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVED 215 (260)
Q Consensus 140 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 215 (260)
............+......... ......+ ............+++++|+++++|++|.+++++..+.+.+..|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~ 289 (322)
T d1zd3a2 211 SLSRMVTEEEIQFYVQQFKKSGF-RGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLK 289 (322)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTT-HHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTCE
T ss_pred hhhhhccHHHHHHHHHHHhhccc-ccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCE
Confidence 0001111211111111000000 0000000 0000001134567889999999999999999999999999999999
Q ss_pred EEEeCCCCCCcchhchhHHHHHHHHhhhhc
Q 024971 216 FIVLPNVGHCPQVSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 216 ~~~~~~~gH~~~~~~p~~~~~~i~~~l~~~ 245 (260)
+++++++||++++|+|+++++.|.+||+.-
T Consensus 290 ~~~i~~~gH~~~~e~p~~v~~~i~~FL~~~ 319 (322)
T d1zd3a2 290 RGHIEDCGHWTQMDKPTEVNQILIKWLDSD 319 (322)
T ss_dssp EEEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCchHHhCHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999753
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=7.1e-33 Score=200.13 Aligned_cols=221 Identities=18% Similarity=0.193 Sum_probs=142.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeCh-hhHHHHHHHhhCccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI-GGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~-Gg~~a~~~a~~~p~~v~~lv 82 (260)
++||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++++++|||+ ||.+++.+|.++|++|+++|
T Consensus 46 ~~g~~vi~~D~~G~G~s~~~~-------~~~~~~~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lv 118 (275)
T d1a88a_ 46 SHGYRVIAHDRRGHGRSDQPS-------TGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAV 118 (275)
T ss_dssp HTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEE
T ss_pred hCCCEEEEEeccccccccccc-------ccccccccccccccccccccccccccccccccccchhhcccccCcchhhhhh
Confidence 578999999999999998765 5689999999999999999999999999997 66677788899999999999
Q ss_pred EeccCccccccCCCCCCC--cchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhcc----CCCCcccHHHHHHHhccC
Q 024971 83 LLNISLRMLHIKKQPWYG--RPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY----NDTSQVTEELVEKILQPG 156 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 156 (260)
++++.+............ ......+........ ...........+ ..................
T Consensus 119 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (275)
T d1a88a_ 119 LVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANR-----------AQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQG 187 (275)
T ss_dssp EESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCH-----------HHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHH
T ss_pred hhcccccccccchhhhhhhhhhhhhhhhhhhhhhh-----------HHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhh
Confidence 999765332211111111 011111111100000 000111111111 111122222222222111
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH-HHHhhccCCCccEEEeCCCCCCcchhchhHHH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLS 235 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 235 (260)
.... ..............+..+.++++++|+++++|++|.++|.+. .+.+.+..|++++++++++||+++.|+|++++
T Consensus 188 ~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 266 (275)
T d1a88a_ 188 MMGA-ANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLN 266 (275)
T ss_dssp HHSC-HHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHH
T ss_pred cccc-hHHHHHHHHHhhhhhhhHHHHhhccccceeecCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHH
Confidence 1111 112222222222223345677899999999999999998754 56677778999999999999999999999999
Q ss_pred HHHHHhhh
Q 024971 236 SACLHTLS 243 (260)
Q Consensus 236 ~~i~~~l~ 243 (260)
+.|.+||+
T Consensus 267 ~~i~~Fl~ 274 (275)
T d1a88a_ 267 PDLLAFVK 274 (275)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99999986
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.98 E-value=5.6e-32 Score=195.16 Aligned_cols=223 Identities=17% Similarity=0.169 Sum_probs=140.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHH-HHhhCccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQ-AAVMEPEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~-~a~~~p~~v~~lv 82 (260)
++||+|+++|+||||.|+.+. ..++++++++|+.+++++++.++.+++|||+||.++.. ++..+|++|.+++
T Consensus 44 ~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~ 116 (273)
T d1a8sa_ 44 AQGYRVIAHDRRGHGRSSQPW-------SGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAG 116 (273)
T ss_dssp HTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEE
T ss_pred hCCCEEEEEechhcCcccccc-------ccccccchHHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeE
Confidence 578999999999999998765 56899999999999999999999999999998865555 5566799999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhcc----CCCCcccHHHHHHHhccCCc
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCY----NDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 158 (260)
++++.+............ .....+.......... ............. .............+......
T Consensus 117 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (273)
T d1a8sa_ 117 LISAVPPLMLKTEANPGG-LPMEVFDGIRQASLAD--------RSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMA 187 (273)
T ss_dssp EESCCCSCCBCCSSCTTS-BCHHHHHHHHHHHHHH--------HHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccc-chhhhhhhHHHHHHHH--------HHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcc
Confidence 998865432211111111 1111111110000000 0011111111111 11111222222222221111
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhh-ccCCCccEEEeCCCCCCcchhchhHHHHH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYG-NFDSVEDFIVLPNVGHCPQVSLYLSLSSA 237 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 237 (260)
......+ .........+..+.++++++|+++++|++|.++|.+..+.+. +..+++++++++++||++++|+|+++++.
T Consensus 188 ~~~~~~~-~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 266 (273)
T d1a8sa_ 188 AGHKNAY-DCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNAD 266 (273)
T ss_dssp SCHHHHH-HHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHH
T ss_pred cchhhhh-hhHHHhhhhhhhHHHHhhccceEEEecCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHH
Confidence 1111111 111112222334567889999999999999999888766654 44788999999999999999999999999
Q ss_pred HHHhhh
Q 024971 238 CLHTLS 243 (260)
Q Consensus 238 i~~~l~ 243 (260)
|.+||+
T Consensus 267 i~~Fl~ 272 (273)
T d1a8sa_ 267 LLAFIK 272 (273)
T ss_dssp HHHHHH
T ss_pred HHHHcC
Confidence 999986
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.98 E-value=6.2e-31 Score=193.49 Aligned_cols=82 Identities=18% Similarity=0.103 Sum_probs=75.1
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
++++|+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|++++
T Consensus 57 l~~~~~Vi~~D~rG~G~S~~~~~-----~~~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 131 (313)
T d1azwa_ 57 DPAKYRIVLFDQRGSGRSTPHAD-----LVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELV 131 (313)
T ss_dssp CTTTEEEEEECCTTSTTSBSTTC-----CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEE
T ss_pred hhcCCEEEEEeccccCCCCcccc-----ccchhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeee
Confidence 57899999999999999987553 3568999999999999999999999999999999999999999999999999
Q ss_pred EeccCcc
Q 024971 83 LLNISLR 89 (260)
Q Consensus 83 l~~~~~~ 89 (260)
++++...
T Consensus 132 ~~~~~~~ 138 (313)
T d1azwa_ 132 LRGIFLL 138 (313)
T ss_dssp EESCCCC
T ss_pred Eeccccc
Confidence 9998653
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.97 E-value=3.4e-31 Score=190.73 Aligned_cols=226 Identities=16% Similarity=0.148 Sum_probs=139.8
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHH-HHHhhCccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGL-QAAVMEPEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~-~~a~~~p~~v~~lv 82 (260)
++||+|+++|+||||.|+.+. ..++++++++++.+++++++.++++++|||+||.++. .+|..+|+++.+++
T Consensus 44 ~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v 116 (271)
T d1va4a_ 44 SRGYRTIAFDRRGFGRSDQPW-------TGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLV 116 (271)
T ss_dssp TTTCEEEEECCTTSTTSCCCS-------SCCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEE
T ss_pred hCCCEEEEEeccccccccccc-------cccccccccccceeeeeecCCCcceeeccccccccccccccccccceeeEEE
Confidence 468999999999999998765 5679999999999999999999999999999887655 55677899999999
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchH
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
++++........... ................. . ..... ............ ................... ...
T Consensus 117 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~ 188 (271)
T d1va4a_ 117 LLGAVTPLFGQKPDY-PQGVPLDVFARFKTELL-K-DRAQF--ISDFNAPFYGIN--KGQVVSQGVQTQTLQIALL-ASL 188 (271)
T ss_dssp EESCCCSCCBCBTTB-TTSBCHHHHHHHHHHHH-H-HHHHH--HHHHHHHHHTGG--GTCCCCHHHHHHHHHHHHH-SCH
T ss_pred eecccccccccchhh-hhhhhhhHHHHHHHHhh-h-hhhhh--hhhhcchhhccc--chhhhhhhHHHHHHhhhhh-hhh
Confidence 998865432211111 01011111111100000 0 00000 000000111110 0111111111111111111 111
Q ss_pred HHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHh-hccCCCccEEEeCCCCCCcchhchhHHHHHHHHh
Q 024971 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAY-GNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHT 241 (260)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 241 (260)
.............+....++++++|+++++|++|.+++.+...++ .+..+++++++++++||++++|+|+++++.|.+|
T Consensus 189 ~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 268 (271)
T d1va4a_ 189 KATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAF 268 (271)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHH
T ss_pred hhhhhcccccchhhhhhhhhhcccceeecccCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 222222222222233456778899999999999999998876554 5567899999999999999999999999999999
Q ss_pred hhh
Q 024971 242 LSY 244 (260)
Q Consensus 242 l~~ 244 (260)
|++
T Consensus 269 L~k 271 (271)
T d1va4a_ 269 LKR 271 (271)
T ss_dssp HTC
T ss_pred HCc
Confidence 974
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.97 E-value=1e-32 Score=196.98 Aligned_cols=222 Identities=11% Similarity=0.006 Sum_probs=139.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC-CceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK-DQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
+||+|+++|+||||.|+.+. ...+++++++.++..+++.... ++++++||||||.+++.++.++|++++++|+
T Consensus 28 ~g~~vi~~Dl~G~G~S~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS~Gg~va~~~a~~~p~~~~~lil 101 (258)
T d1xkla_ 28 AGHKVTALDLAASGTDLRKI------EELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVF 101 (258)
T ss_dssp TTCEEEECCCTTSTTCCCCG------GGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEE
T ss_pred CCCEEEEecCCCCCCCCCCC------CCCcchHHHHHHHhhhhhcccccccccccccchhHHHHHHHhhhhccccceEEE
Confidence 58999999999999998765 3567999999999999988865 5899999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHH------HHHHH-hcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGK------LFYKM-VATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
+++......... .................. ..... ................... .............
T Consensus 102 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 175 (258)
T d1xkla_ 102 LAAFMPDSVHNS-----SFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLC-SPEDLALASSLVR 175 (258)
T ss_dssp ESCCCCCSSSCT-----THHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTSTTS-CHHHHHHHHHHCC
T ss_pred ecccCCCcccch-----HHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHHHHhhhcc-cHHHHHHhhhhhh
Confidence 998653221100 000000000000000000 00000 0000000000000000000 0000000000000
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSS 236 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 236 (260)
......... ........+..+++|+++|+|++|.++|++..+.+.+.+|++++++++++||++++|+|+++++
T Consensus 176 ~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~ 248 (258)
T d1xkla_ 176 PSSLFMEDL-------SKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCA 248 (258)
T ss_dssp CBCCCHHHH-------HHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHH
T ss_pred hhhhhhhhh-------hhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHH
Confidence 000000000 0112244567788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhc
Q 024971 237 ACLHTLSYL 245 (260)
Q Consensus 237 ~i~~~l~~~ 245 (260)
.|.+|+++.
T Consensus 249 ~l~e~~~k~ 257 (258)
T d1xkla_ 249 SLLEIAHKY 257 (258)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999998764
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.5e-32 Score=188.45 Aligned_cols=151 Identities=19% Similarity=0.166 Sum_probs=123.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
.+||+|+++|+||||.|+.+.. ...++....++++.++++.++.++++++||||||.+++.+|.++|++++++|+
T Consensus 58 ~~gy~via~D~~G~G~S~~~~~-----~~~~~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~ 132 (208)
T d1imja_ 58 QAGYRAVAIDLPGLGHSKEAAA-----PAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVP 132 (208)
T ss_dssp HTTCEEEEECCTTSGGGTTSCC-----SSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEE
T ss_pred HcCCeEEEeecccccCCCCCCc-----ccccchhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeee
Confidence 3589999999999999987653 13345556677888999999999999999999999999999999999999999
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHH
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (260)
++|..... ..
T Consensus 133 ~~p~~~~~----------------------------------------------------~~------------------ 142 (208)
T d1imja_ 133 VAPICTDK----------------------------------------------------IN------------------ 142 (208)
T ss_dssp ESCSCGGG----------------------------------------------------SC------------------
T ss_pred cCcccccc----------------------------------------------------cc------------------
Confidence 98752100 00
Q ss_pred HHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhh
Q 024971 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~ 243 (260)
.+.+.++++|+|+|+|++|.++|.+. ...+..+++++.+++++||..++++|+++.+.+.+||+
T Consensus 143 --------------~~~~~~i~~P~Lii~G~~D~~~~~~~--~~~~~~~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~ 206 (208)
T d1imja_ 143 --------------AANYASVKTPALIVYGDQDPMGQTSF--EHLKQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQ 206 (208)
T ss_dssp --------------HHHHHTCCSCEEEEEETTCHHHHHHH--HHHTTSSSEEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred --------------cccccccccccccccCCcCcCCcHHH--HHHHhCCCCeEEEECCCCCchhhhCHHHHHHHHHHHHh
Confidence 11234678999999999999877553 34456899999999999999999999999999999998
Q ss_pred hc
Q 024971 244 YL 245 (260)
Q Consensus 244 ~~ 245 (260)
.|
T Consensus 207 ~L 208 (208)
T d1imja_ 207 GL 208 (208)
T ss_dssp TC
T ss_pred cC
Confidence 65
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.96 E-value=2e-28 Score=178.30 Aligned_cols=226 Identities=19% Similarity=0.171 Sum_probs=132.4
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH-hhcCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK-DVVKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.|+++|+|+++|+||||.|+...... .......+..+++..++. ..+.++++++||||||.+++.++.++|++|.+
T Consensus 50 ~L~~~~~vi~~Dl~G~G~S~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 126 (298)
T d1mj5a_ 50 HCAGLGRLIACDLIGMGDSDKLDPSG---PERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQG 126 (298)
T ss_dssp GGTTSSEEEEECCTTSTTSCCCSSCS---TTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEE
T ss_pred HHhcCCEEEEEeCCCCCCCCCCcccc---ccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhhe
Confidence 57889999999999999998765321 123445566666655544 44678999999999999999999999999999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc--
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE-- 158 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 158 (260)
++++++........................ .... .................. ..........+......
T Consensus 127 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 197 (298)
T d1mj5a_ 127 IAYMEAIAMPIEWADFPEQDRDLFQAFRSQ-----AGEE--LVLQDNVFVEQVLPGLIL--RPLSEAEMAAYREPFLAAG 197 (298)
T ss_dssp EEEEEECCSCBCGGGSCGGGHHHHHHHHST-----THHH--HHTTTCHHHHTHHHHTSS--SCCCHHHHHHHHGGGCSSS
T ss_pred eeccccccccccchhhhhhhhhhhhhhhhh-----hhhh--hhhhhhhhhhhhcccccc--ccchhhhhhhhhhhhccch
Confidence 999998754432111111000000000000 0000 000000001111111100 01111111111111100
Q ss_pred ----------------cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCC
Q 024971 159 ----------------TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNV 222 (260)
Q Consensus 159 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (260)
............ ....++.+++|+++++|++|.+.+ ...+.+.+..|+.++++++ +
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~l~i~g~~d~~~~-~~~~~~~~~~p~~~~~~~~-~ 269 (298)
T d1mj5a_ 198 EARRPTLSWPRQIPIAGTPADVVAIARD------YAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTWPNQTEITVA-G 269 (298)
T ss_dssp GGGHHHHHTGGGSCBTTBSHHHHHHHHH------HHHHHTTCCSCEEEEEEEECSSSS-HHHHHHHTTCSSEEEEEEE-E
T ss_pred hhhhhhhhhhhhhhhcchhhhhhhhhhh------hhhhhhhcceeEEEEecCCCCcCh-HHHHHHHHHCCCCEEEEeC-C
Confidence 000000000000 023456788999999999998765 5567788888988877765 6
Q ss_pred CCCcchhchhHHHHHHHHhhhhccc
Q 024971 223 GHCPQVSLYLSLSSACLHTLSYLHT 247 (260)
Q Consensus 223 gH~~~~~~p~~~~~~i~~~l~~~~~ 247 (260)
||++++|+|+++++.|.+||+++..
T Consensus 270 GH~~~~e~P~~v~~~i~~fl~~~~~ 294 (298)
T d1mj5a_ 270 AHFIQEDSPDEIGAAIAAFVRRLRP 294 (298)
T ss_dssp SSCGGGTCHHHHHHHHHHHHHHHSC
T ss_pred CCchHHhCHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999998754
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.96 E-value=2.7e-28 Score=174.35 Aligned_cols=221 Identities=11% Similarity=0.050 Sum_probs=121.8
Q ss_pred CC-CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 3 LA-KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 3 L~-~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
|+ .||+|+++|+||||.|+.... ........+.+........+.++++++||||||.+++.++.++|+.+.++
T Consensus 39 L~~~g~~vi~~Dl~G~G~s~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~ 112 (264)
T d1r3da_ 39 LARTQCAALTLDLPGHGTNPERHC------DNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNL 112 (264)
T ss_dssp HTTSSCEEEEECCTTCSSCC-------------CHHHHHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEE
T ss_pred HHhCCCEEEEEecccccccccccc------cccchhhhhhhhcccccccccCceeeeeecchHHHHHHHHHhCchhcccc
Confidence 54 589999999999999987652 23344444444445555556779999999999999999999999999998
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHH-HHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSES-VRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+++.+...... .... ................ . ....... ......... ....................
T Consensus 113 ~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 181 (264)
T d1r3da_ 113 RGAIIEGGHFG------LQEN-EEKAARWQHDQQWAQR-F-SQQPIEHVLSDWYQQAV--FSSLNHEQRQTLIAQRSANL 181 (264)
T ss_dssp EEEEEESCCCC------CCSH-HHHHHHHHHHHHHHHH-H-HHSCHHHHHHHHTTSGG--GTTCCHHHHHHHHHHHTTSC
T ss_pred ccccccCCCcc------ccch-hhhhhhhhhhhhhhhh-h-hhhhhhhhhhhhhhhhh--hcccchHHHHHHHHHHhhhh
Confidence 88776543211 1110 0000000000000000 0 0001111 111111100 01111122121111111111
Q ss_pred --hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHH
Q 024971 161 --AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
..................+.+..+++|+++++|++|..+ ..+.+ .+++++++++++||++++|+|+++++.|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~-----~~~~~-~~~~~~~~i~~~gH~~~~e~P~~~~~~i 255 (264)
T d1r3da_ 182 GSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAE-SSGLSYSQVAQAGHNVHHEQPQAFAKIV 255 (264)
T ss_dssp HHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHH-HHCSEEEEETTCCSCHHHHCHHHHHHHH
T ss_pred hhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH-----HHHHh-cCCCeEEEECCCCCchHHHCHHHHHHHH
Confidence 111111111122222334456788999999999999533 22222 3578999999999999999999999999
Q ss_pred HHhhhhcc
Q 024971 239 LHTLSYLH 246 (260)
Q Consensus 239 ~~~l~~~~ 246 (260)
.+||+.+.
T Consensus 256 ~~fl~~l~ 263 (264)
T d1r3da_ 256 QAMIHSII 263 (264)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcc
Confidence 99998764
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.96 E-value=7.3e-28 Score=181.23 Aligned_cols=241 Identities=12% Similarity=0.068 Sum_probs=136.7
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCC--CCCCccHH-----HHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCcc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFF--DKPFYTFE-----TWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE 76 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 76 (260)
.+||+|+++|+||||.|+.+...... ....++++ ++++++..+++.++.++++++||||||.+++.+|..+|+
T Consensus 89 ~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~ 168 (377)
T d1k8qa_ 89 DAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPK 168 (377)
T ss_dssp HTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHH
T ss_pred HCCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhh
Confidence 37899999999999999875432111 01233444 455667777788899999999999999999999999999
Q ss_pred chhhceEeccCccccccCCCCCCCcchh---HHHhhhh-------hhhhhHHHHHHHhcCh----HHHHHHHHhc-cCCC
Q 024971 77 ICRGMILLNISLRMLHIKKQPWYGRPLI---RSFQNLL-------RNTAAGKLFYKMVATS----ESVRNILCQC-YNDT 141 (260)
Q Consensus 77 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~ 141 (260)
.+++++++.................... ....... ................ .......... ....
T Consensus 169 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (377)
T d1k8qa_ 169 LAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDT 248 (377)
T ss_dssp HHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCG
T ss_pred hhhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCc
Confidence 9999988775543221111110000000 0000000 0000001111111000 0111111000 0111
Q ss_pred CcccHHHHHHHhccCCccchHHHHH---------------------HHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCC
Q 024971 142 SQVTEELVEKILQPGLETGAADVFL---------------------EFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP 200 (260)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 200 (260)
..........+.............. ....+.........+++|++|+|+++|++|.+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~ 328 (377)
T d1k8qa_ 249 MNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLAD 328 (377)
T ss_dssp GGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSC
T ss_pred ccccHHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccC
Confidence 1111111122211111111111111 1111222223345678899999999999999999
Q ss_pred hHHHHHhhccCCCc-cEEEeCCCCCCcc---hhchhHHHHHHHHhhhh
Q 024971 201 IELGRAYGNFDSVE-DFIVLPNVGHCPQ---VSLYLSLSSACLHTLSY 244 (260)
Q Consensus 201 ~~~~~~~~~~~~~~-~~~~~~~~gH~~~---~~~p~~~~~~i~~~l~~ 244 (260)
++..+.+.+.+|+. +.++++++||+.+ .+.+++|.+.|.+||+.
T Consensus 329 ~~~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 329 PHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 99999999999885 6788999999843 36699999999999974
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.95 E-value=3.6e-28 Score=177.99 Aligned_cols=231 Identities=12% Similarity=0.023 Sum_probs=131.9
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
.|+++|+|+++|+||||.|+.... ...++...+++|+..++++++.++++++|||+||.+++.+|..+|++|.++
T Consensus 56 ~l~~~~~vi~~D~rG~G~S~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~ 130 (313)
T d1wm1a_ 56 FDPERYKVLLFDQRGCGRSRPHAS-----LDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEM 130 (313)
T ss_dssp SCTTTEEEEEECCTTSTTCBSTTC-----CTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEE
T ss_pred HhhcCCEEEEEeCCCccccccccc-----ccccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheee
Confidence 578899999999999999987654 357889999999999999999999999999999999999999999999999
Q ss_pred eEeccCccccccCC-----CC-CCCcchhHHHhhhhhh----hhhHHHHHHHhcChHH-HHHHH-----HhccCCCCccc
Q 024971 82 ILLNISLRMLHIKK-----QP-WYGRPLIRSFQNLLRN----TAAGKLFYKMVATSES-VRNIL-----CQCYNDTSQVT 145 (260)
Q Consensus 82 vl~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~ 145 (260)
+++++......... .. ................ ................ ..... ...........
T Consensus 131 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (313)
T d1wm1a_ 131 VLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPS 210 (313)
T ss_dssp EEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCC
T ss_pred eecccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccc
Confidence 99987653211000 00 0000000000000000 0000000000000000 00000 00000000000
Q ss_pred HHHHHHHhccCCccchHHHHHHHHhh--hCCC---CCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeC
Q 024971 146 EELVEKILQPGLETGAADVFLEFICY--SGGP---LPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP 220 (260)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 220 (260)
..... .................... .... ......+.+++|+++|+|++|.++|++..+.+++.+|++++++++
T Consensus 211 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~p~a~~~~i~ 289 (313)
T d1wm1a_ 211 RESAS-FGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVE 289 (313)
T ss_dssp GGGGG-GGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEET
T ss_pred hhhhh-hhhhhHHhhhhhhhhhhhhhhcccccchhhhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHCCCCEEEEEC
Confidence 00000 00000000000000000000 0000 012345567899999999999999999999999999999999999
Q ss_pred CCCCCcchhchhHHHHHHHH
Q 024971 221 NVGHCPQVSLYLSLSSACLH 240 (260)
Q Consensus 221 ~~gH~~~~~~p~~~~~~i~~ 240 (260)
++||++ ++|+.+.+.|..
T Consensus 290 ~aGH~~--~eP~~~~~lv~a 307 (313)
T d1wm1a_ 290 GAGHSY--DEPGILHQLMIA 307 (313)
T ss_dssp TCCSST--TSHHHHHHHHHH
T ss_pred CCCCCc--CCchHHHHHHHH
Confidence 999975 357777665544
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.95 E-value=2.2e-26 Score=162.26 Aligned_cols=199 Identities=13% Similarity=0.091 Sum_probs=122.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHH---HHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQL---NDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
+||+|+++|+||||.|.... ...+..+...++ ...++..+.++++++||||||.+++.++.++|. ..+
T Consensus 37 ~G~~v~~~D~~G~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~~~--~~~ 107 (242)
T d1tqha_ 37 KGYTCHAPIYKGHGVPPEEL-------VHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPI--EGI 107 (242)
T ss_dssp TTCEEEECCCTTSSSCHHHH-------TTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSCC--SCE
T ss_pred CCCEEEEEeCCCCccccccc-------cccchhHHHHHHHHHHhhhhhcccCceEEEEcchHHHHhhhhcccCcc--ccc
Confidence 58999999999999987644 233444444444 444566678899999999999999999999985 456
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
++++++.... ............ ..................... ... ......
T Consensus 108 ~~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---------------~~~-~~~~~~ 159 (242)
T d1tqha_ 108 VTMCAPMYIK----------SEETMYEGVLEY--AREYKKREGKSEEQIEQEMEK---------------FKQ-TPMKTL 159 (242)
T ss_dssp EEESCCSSCC----------CHHHHHHHHHHH--HHHHHHHHTCCHHHHHHHHHH---------------HTT-SCCTTH
T ss_pred cccccccccc----------chhHHHHHHHHH--HHHHhhhccchhhhHHHHHhh---------------hhh-hccchh
Confidence 6666653221 001111000000 000000000111111111000 000 000000
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC--CCccEEEeCCCCCCcchh-chhHHHHHH
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD--SVEDFIVLPNVGHCPQVS-LYLSLSSAC 238 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~-~p~~~~~~i 238 (260)
.......... ...+..+++|+|+++|++|..++++..+.+.+.+ +++++++++++||+++.+ +++++.+.|
T Consensus 160 ~~~~~~~~~~------~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i 233 (242)
T d1tqha_ 160 KALQELIADV------RDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDI 233 (242)
T ss_dssp HHHHHHHHHH------HHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHH
T ss_pred hccccccccc------ccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHH
Confidence 1111111000 2356778999999999999999999998887775 568899999999999987 599999999
Q ss_pred HHhhhhcc
Q 024971 239 LHTLSYLH 246 (260)
Q Consensus 239 ~~~l~~~~ 246 (260)
.+||+.++
T Consensus 234 ~~Fl~~l~ 241 (242)
T d1tqha_ 234 YAFLESLD 241 (242)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhCC
Confidence 99998864
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.94 E-value=1.1e-25 Score=170.12 Aligned_cols=232 Identities=11% Similarity=0.026 Sum_probs=134.7
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEec
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLN 85 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 85 (260)
.|+||++|+||||.|+.+.. ...++..++++++..+++.++.++++++|||+||.++..++..+|+++.++++++
T Consensus 139 ~f~VIaPDLpG~G~S~~P~~-----~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~ 213 (394)
T d1qo7a_ 139 PFHLVVPSLPGYTFSSGPPL-----DKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNL 213 (394)
T ss_dssp CEEEEEECCTTSTTSCCCCS-----SSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESC
T ss_pred ceeeecccccccCCCCCCCC-----CCccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEee
Confidence 49999999999999998753 2578999999999999999999999999999999999999999999999999888
Q ss_pred cCccccccCCCCCCCcchh-HHHhhh---hhhh---------hhHHHHHHHhcChHHHHHHHHh---ccCCCCcccHHHH
Q 024971 86 ISLRMLHIKKQPWYGRPLI-RSFQNL---LRNT---------AAGKLFYKMVATSESVRNILCQ---CYNDTSQVTEELV 149 (260)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 149 (260)
................... ..+... .... ............+......+.. .+........+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l 293 (394)
T d1qo7a_ 214 CAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETIL 293 (394)
T ss_dssp CCCCSCSSSCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHH
T ss_pred ecccccccccccccchhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHH
Confidence 7654332111111110000 000000 0000 0000000111111111111111 0111111111211
Q ss_pred H---HHhccCCccchHHHHHHHHhhhC---CCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCC
Q 024971 150 E---KILQPGLETGAADVFLEFICYSG---GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNV 222 (260)
Q Consensus 150 ~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~ 222 (260)
. .+............+........ .........+|++|+++++|.+|...+++. +.+..++ ..+.+++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~~---~~~~~~~~~~~~~~~~~ 370 (394)
T d1qo7a_ 294 EMVSLYWLTESFPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPRS---WIATTGNLVFFRDHAEG 370 (394)
T ss_dssp HHHHHHHHTTCHHHHGGGHHHHCC---------CTTTTTCEEEEEEEEECTBSSSCCCHH---HHGGGEEEEEEEECSSC
T ss_pred HHHHHHhhccccchhHHHHHHHhhcccccchhhhhccCCcccCCeEEEEeCCCccccHHH---HHHhccCceEEEEcCCc
Confidence 1 11111111111111111111000 111123445788999999999998766543 3333333 457789999
Q ss_pred CCCcchhchhHHHHHHHHhhhhc
Q 024971 223 GHCPQVSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 223 gH~~~~~~p~~~~~~i~~~l~~~ 245 (260)
||++++|+|+++++.|.+|++++
T Consensus 371 GHf~~~E~Pe~~a~~I~~Fl~~v 393 (394)
T d1qo7a_ 371 GHFAALERPRELKTDLTAFVEQV 393 (394)
T ss_dssp BSCHHHHCHHHHHHHHHHHHHHH
T ss_pred CCchHHhCHHHHHHHHHHHHHHh
Confidence 99999999999999999999864
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=9.6e-28 Score=172.08 Aligned_cols=75 Identities=19% Similarity=0.197 Sum_probs=69.1
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCcc-chhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl 83 (260)
.+|+|+++|+||||.|..+. .++++++++++.+++++++ ++++|+||||||.+|+.+|.++|+ +|+++|+
T Consensus 30 ~~~~v~~~d~~G~g~S~~~~--------~~~~~~~~~~l~~~l~~l~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl 100 (268)
T d1pjaa_ 30 PGTVVTVLDLFDGRESLRPL--------WEQVQGFREAVVPIMAKAP-QGVHLICYSQGGLVCRALLSVMDDHNVDSFIS 100 (268)
T ss_dssp TTCCEEECCSSCSGGGGSCH--------HHHHHHHHHHHHHHHHHCT-TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred CCeEEEEeCCCCCCCCCCcc--------ccCHHHHHHHHHHHHhccC-CeEEEEccccHHHHHHHHHHHCCccccceEEE
Confidence 37999999999999998754 5789999999999999998 999999999999999999999998 6999999
Q ss_pred eccCc
Q 024971 84 LNISL 88 (260)
Q Consensus 84 ~~~~~ 88 (260)
++++.
T Consensus 101 ~~~~~ 105 (268)
T d1pjaa_ 101 LSSPQ 105 (268)
T ss_dssp ESCCT
T ss_pred ECCCC
Confidence 99854
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.91 E-value=2.2e-23 Score=142.86 Aligned_cols=144 Identities=16% Similarity=0.072 Sum_probs=108.5
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
+.||.|+.+|+||+|.|..... +.....+|+.++++.+ ..++++++||||||.+++.+|.+. .++
T Consensus 65 ~~G~~vlrfd~RG~G~S~g~~~---------~~~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~ 133 (218)
T d2fuka1 65 ELGITVVRFNFRSVGTSAGSFD---------HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQ 133 (218)
T ss_dssp TTTCEEEEECCTTSTTCCSCCC---------TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCS
T ss_pred HcCCeEEEeecCCCccCCCccC---------cCcchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccc
Confidence 4699999999999999988642 2234455555554443 567899999999999999988764 478
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCcc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLET 159 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (260)
++|+++|+....
T Consensus 134 ~lil~ap~~~~~-------------------------------------------------------------------- 145 (218)
T d2fuka1 134 VLISIAPPAGRW-------------------------------------------------------------------- 145 (218)
T ss_dssp EEEEESCCBTTB--------------------------------------------------------------------
T ss_pred eEEEeCCcccch--------------------------------------------------------------------
Confidence 999999852100
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEEeCCCCCCcchhchhHHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
......+.+|+|+|+|++|.++|.+..+.+.+..+ ..++++++|++|++. .+-+++.+.+
T Consensus 146 ------------------~~~~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f~-~~~~~l~~~~ 206 (218)
T d2fuka1 146 ------------------DFSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFH-RKLIDLRGAL 206 (218)
T ss_dssp ------------------CCTTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCT-TCHHHHHHHH
T ss_pred ------------------hhhccccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCCC-CCHHHHHHHH
Confidence 00112346899999999999999999998876644 468999999999765 4456789999
Q ss_pred HHhhhhc
Q 024971 239 LHTLSYL 245 (260)
Q Consensus 239 ~~~l~~~ 245 (260)
.+|+++.
T Consensus 207 ~~~v~~~ 213 (218)
T d2fuka1 207 QHGVRRW 213 (218)
T ss_dssp HHHHGGG
T ss_pred HHHHHHh
Confidence 9999643
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.91 E-value=3e-24 Score=156.09 Aligned_cols=183 Identities=11% Similarity=0.054 Sum_probs=107.3
Q ss_pred CCccEEEEEcCCCC-CCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccchh
Q 024971 4 AKSHRVYSIDLIGY-GYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICR 79 (260)
Q Consensus 4 ~~~~~v~~~D~~G~-G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 79 (260)
++||+|+++|+||| |.|++.. ..+++.++.+|+.++++.+ +.++++++||||||.+++.+|... .++
T Consensus 57 ~~G~~Vi~~D~rGh~G~S~g~~-------~~~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~~--~v~ 127 (302)
T d1thta_ 57 TNGFHVFRYDSLHHVGLSSGSI-------DEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDL--ELS 127 (302)
T ss_dssp TTTCCEEEECCCBCC---------------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTTS--CCS
T ss_pred HCCCEEEEecCCCCCCCCCCcc-------cCCCHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhccc--ccc
Confidence 46999999999998 8887654 4678888999988877776 467999999999999999988754 488
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHh-ccCCCCcccHHHHHHHhccCCc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQ-CYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
++|+.+|...... .....+...... ...... ... ...........+..........
T Consensus 128 ~li~~~g~~~~~~-------------~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (302)
T d1thta_ 128 FLITAVGVVNLRD-------------TLEKALGFDYLS-------LPIDEL---PNDLDFEGHKLGSEVFVRDCFEHHWD 184 (302)
T ss_dssp EEEEESCCSCHHH-------------HHHHHHSSCGGG-------SCGGGC---CSEEEETTEEEEHHHHHHHHHHTTCS
T ss_pred eeEeecccccHHH-------------HHHHHHhhccch-------hhhhhc---cccccccccchhhHHHHHHHHHhHHH
Confidence 9999887643210 000000000000 000000 000 0000000001111111000000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC--CccEEEeCCCCCCcchhchhH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS--VEDFIVLPNVGHCPQVSLYLS 233 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~ 233 (260)
.... ..+.+.++++|+++++|++|.++|++.++.+.+.++ ++++++++|+||.+. |+++.
T Consensus 185 --~~~~------------~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~ 246 (302)
T d1thta_ 185 --TLDS------------TLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVV 246 (302)
T ss_dssp --SHHH------------HHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHH
T ss_pred --HHHH------------HHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc-cChHH
Confidence 0000 023467889999999999999999999999888754 689999999999865 44443
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.91 E-value=2.4e-24 Score=155.19 Aligned_cols=193 Identities=11% Similarity=0.114 Sum_probs=125.5
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH-HHHhhcCCceEEEEeChhhHHHHHHHhhCc----c
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLND-FCKDVVKDQAFFICNSIGGLVGLQAAVMEP----E 76 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p----~ 76 (260)
.|+.+++|+++|+||||.|+..... ....+++++++++.+ +++..+..+++|+||||||.+|+.+|.+.+ +
T Consensus 84 ~L~~~~~V~al~~pG~~~~~~~~~~----~~~~s~~~~a~~~~~~i~~~~~~~P~vL~GhS~GG~vA~e~A~~l~~~~g~ 159 (283)
T d2h7xa1 84 SFQEERDFLAVPLPGYGTGTGTGTA----LLPADLDTALDAQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGA 159 (283)
T ss_dssp TTTTTCCEEEECCTTCCBC---CBC----CEESSHHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSC
T ss_pred hcCCCceEEEEeCCCCCCCCCCccc----cccCCHHHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHhhHHHcCC
Confidence 5788899999999999998765521 123589999998765 567778889999999999999999998764 4
Q ss_pred chhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccC
Q 024971 77 ICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPG 156 (260)
Q Consensus 77 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (260)
.|.+++++++..... .......... ........ ............+
T Consensus 160 ~v~~LvL~d~~~~~~---------~~~~~~~~~~------------------~~~~~~~~---~~~~~~~~~l~a~---- 205 (283)
T d2h7xa1 160 PPAGIVLVDPYPPGH---------QEPIEVWSRQ------------------LGEGLFAG---ELEPMSDARLLAM---- 205 (283)
T ss_dssp CCSEEEEESCCCTTC---------CHHHHHTHHH------------------HHHHHHHT---CSSCCCHHHHHHH----
T ss_pred CceEEEEecCCcccc---------ccchhhhhhh------------------hHHHhhcc---cccccccHHHHHH----
Confidence 689999999864221 0000000000 00000000 0111111111110
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC-ccEEEeCCCCCCcc-hhchhHH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV-EDFIVLPNVGHCPQ-VSLYLSL 234 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~-~~~p~~~ 234 (260)
..+..... ......+++|+++++|++|..++.+....+.+..++ .+++.++| +|+.+ .++++++
T Consensus 206 ------~~~~~~~~-------~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~v 271 (283)
T d2h7xa1 206 ------GRYARFLA-------GPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPG-DHFTMMRDHAPAV 271 (283)
T ss_dssp ------HHHHHHHH-------SCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEESS-CTTHHHHTTHHHH
T ss_pred ------HHHHHHHh-------hccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEcC-CCcccccCCHHHH
Confidence 01111111 123457899999999999999988877777777654 57888995 89855 4679999
Q ss_pred HHHHHHhhhhcc
Q 024971 235 SSACLHTLSYLH 246 (260)
Q Consensus 235 ~~~i~~~l~~~~ 246 (260)
++.|.+||+.++
T Consensus 272 A~~i~~~L~~ld 283 (283)
T d2h7xa1 272 AEAVLSWLDAIE 283 (283)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC
Confidence 999999998753
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.91 E-value=4.5e-23 Score=151.69 Aligned_cols=234 Identities=15% Similarity=0.085 Sum_probs=142.8
Q ss_pred CccEEEEEcCCCCCCCCCCCC-CCC---------CCCCCccHHHHHHHHHHHHHhhcCCce-EEEEeChhhHHHHHHHhh
Q 024971 5 KSHRVYSIDLIGYGYSDKPNP-RDF---------FDKPFYTFETWASQLNDFCKDVVKDQA-FFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lvGhS~Gg~~a~~~a~~ 73 (260)
..|.||++|..|.|.++.++. .+. ..-..+++.|+++.-..++++||++++ .++|.||||+.|+.+|..
T Consensus 76 ~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~ 155 (376)
T d2vata1 76 SRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFF 155 (376)
T ss_dssp TTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGG
T ss_pred cceEEEEeccCCCCcCCCCCCCCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHh
Confidence 579999999999876543221 100 001246999999999999999999997 577999999999999999
Q ss_pred CccchhhceEeccCccccccCCCCCCCcchhHHHhhhhh-------------------hhhhHHHHHHHhcChHHHHHHH
Q 024971 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLR-------------------NTAAGKLFYKMVATSESVRNIL 134 (260)
Q Consensus 74 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 134 (260)
+|++|+++|.+++...... + ...+.......+. .............+++.+...+
T Consensus 156 ~Pd~v~~li~Ia~~~~~s~-----~-~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf 229 (376)
T d2vata1 156 GPEYVRKIVPIATSCRQSG-----W-CAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERF 229 (376)
T ss_dssp CTTTBCCEEEESCCSBCCH-----H-HHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHS
T ss_pred chHHHhhhcccccccccch-----H-HHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999998753321 0 0000000000000 0001111122223333333322
Q ss_pred HhccCCC----------------------------CcccHHHHHHHhccCCccchHHHHHHHHhhhCC--------CCCC
Q 024971 135 CQCYNDT----------------------------SQVTEELVEKILQPGLETGAADVFLEFICYSGG--------PLPE 178 (260)
Q Consensus 135 ~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 178 (260)
....... ....+..+...............+..+...... .+..
T Consensus 230 ~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~ 309 (376)
T d2vata1 230 HMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIP 309 (376)
T ss_dssp CCCCCCC---------------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHH
T ss_pred hhccccccccccccchhhhcccccccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHH
Confidence 1110000 000011111111111111122222222221111 1223
Q ss_pred ccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeC-CCCCCcchhchhHHHHHHHHhhhh
Q 024971 179 ELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLP-NVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 179 ~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
+.+++|++|+|+|.++.|.++|++..+++++.++++++++++ ..||..++..++.+.+.|.+||++
T Consensus 310 ~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 310 EALAMITQPALIICARSDGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred HHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhcCCCeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 458899999999999999999999999999999999999998 579987777899999999999974
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.89 E-value=6.6e-22 Score=146.99 Aligned_cols=181 Identities=18% Similarity=0.151 Sum_probs=117.0
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccchhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 80 (260)
.+||.|+++|+||||.|..... ...+.+..+..+.+++... +.+++.++||||||.+++.+|...| +|++
T Consensus 156 ~~G~~vl~~D~~G~G~s~~~~~------~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a 228 (360)
T d2jbwa1 156 DRGMATATFDGPGQGEMFEYKR------IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAA 228 (360)
T ss_dssp HTTCEEEEECCTTSGGGTTTCC------SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCE
T ss_pred hcCCEEEEEccccccccCcccc------ccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-Ccce
Confidence 5799999999999999976542 3345666666666666554 3468999999999999999999887 5999
Q ss_pred ceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccc
Q 024971 81 MILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETG 160 (260)
Q Consensus 81 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
+|.+++...... ... ..... ...+...... ....+..
T Consensus 229 ~V~~~~~~~~~~------~~~-----------~~~~~-------------~~~~~~~~~~--~~~~~~~----------- 265 (360)
T d2jbwa1 229 CISWGGFSDLDY------WDL-----------ETPLT-------------KESWKYVSKV--DTLEEAR----------- 265 (360)
T ss_dssp EEEESCCSCSTT------GGG-----------SCHHH-------------HHHHHHHTTC--SSHHHHH-----------
T ss_pred EEEEcccccHHH------Hhh-----------hhhhh-------------hHHHHHhccC--CchHHHH-----------
Confidence 999887643210 000 00000 0000000000 0000000
Q ss_pred hHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCC--ccEEEeCCCCCCcchhchhHHHHHH
Q 024971 161 AADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSV--EDFIVLPNVGHCPQVSLYLSLSSAC 238 (260)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i 238 (260)
...... ......+.+|+||+|+++|++|. +|.+..+.+.+..++ .+++++++++|.. ...+.+....+
T Consensus 266 -----~~~~~~---~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~i 335 (360)
T d2jbwa1 266 -----LHVHAA---LETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEM 335 (360)
T ss_dssp -----HHHHHH---TCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHH
T ss_pred -----HHHHhh---cchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCC-CcChHHHHHHH
Confidence 000001 11134567899999999999998 588888888877664 4567779999964 46678888888
Q ss_pred HHhhhh
Q 024971 239 LHTLSY 244 (260)
Q Consensus 239 ~~~l~~ 244 (260)
.+||+.
T Consensus 336 ~dWl~~ 341 (360)
T d2jbwa1 336 ADWLYD 341 (360)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 889854
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.89 E-value=8e-22 Score=144.00 Aligned_cols=234 Identities=13% Similarity=0.044 Sum_probs=140.5
Q ss_pred CccEEEEEcCCCCCCCCCCCC-CCCC-------CCCCccHHHHHHHHHHHHHhhcCCce-EEEEeChhhHHHHHHHhhCc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNP-RDFF-------DKPFYTFETWASQLNDFCKDVVKDQA-FFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p 75 (260)
+.|.||++|..|.|.++.++. .+.. .-...++.|+++....+++++|++++ .++|.||||+.|+.+|.++|
T Consensus 77 ~kyfVI~~n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~P 156 (357)
T d2b61a1 77 DRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYP 156 (357)
T ss_dssp TTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHST
T ss_pred CceEEEEecccCCccccCCcCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhh
Confidence 569999999999876543321 1110 11247999999999999999999998 56699999999999999999
Q ss_pred cchhhceEeccCccccccCCCCCCCcchhHHHhhhhhh------------------hhhHHHH-HHHhcChHHHHHHHHh
Q 024971 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN------------------TAAGKLF-YKMVATSESVRNILCQ 136 (260)
Q Consensus 76 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~~~~~~~~ 136 (260)
++|+++|.+++...... ....+.......+.. ....+.+ .........+...+.+
T Consensus 157 d~v~~~i~i~~~a~~s~------~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r 230 (357)
T d2b61a1 157 DFMDNIVNLCSSIYFSA------EAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGR 230 (357)
T ss_dssp TSEEEEEEESCCSSCCH------HHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTT
T ss_pred HHHhhhcccccccccch------hHHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhcc
Confidence 99999999998643210 000000000000000 0011111 1112333333333322
Q ss_pred ccCCCC-----cc-cHHHHHHHhccCCccchHHHHHHHHhhh-------CCCCCCccCCCCCCCEEEEecCCCCCCChHH
Q 024971 137 CYNDTS-----QV-TEELVEKILQPGLETGAADVFLEFICYS-------GGPLPEELLPQVKCPVLIAWGDKDPWEPIEL 203 (260)
Q Consensus 137 ~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 203 (260)
...... .. .+..................+..+.... ...+..+.+++|++|+|+|..+.|.++|++.
T Consensus 231 ~~~~~~~~~~~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~ 310 (357)
T d2b61a1 231 ATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPID 310 (357)
T ss_dssp CBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHH
T ss_pred ccccccccccchhhHHHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHH
Confidence 211111 11 1112221111111222222232222211 1123345589999999999999999999988
Q ss_pred HHHhhccC----CCccEEEeCC-CCCCcchhchhHHHHHHHHhhhh
Q 024971 204 GRAYGNFD----SVEDFIVLPN-VGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 204 ~~~~~~~~----~~~~~~~~~~-~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
.+..++.+ .++++++++. .||..++.+.+++.+.|.+||+.
T Consensus 311 ~~~~a~~l~~~~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 311 LYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCeEEEEECCCCCccccCcCHHHHHHHHHHHHcc
Confidence 87766654 4568888875 49988888899999999999863
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.87 E-value=4.1e-21 Score=140.49 Aligned_cols=234 Identities=11% Similarity=0.043 Sum_probs=143.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCC-C-------CCCCccHHHHHHHHHHHHHhhcCCceE-EEEeChhhHHHHHHHhhCc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDF-F-------DKPFYTFETWASQLNDFCKDVVKDQAF-FICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p 75 (260)
+.|.||++|..|.|.|+.++.... . .-...++.|++..-..+++++|++++. ++|.||||+.|+.+|..||
T Consensus 84 ~~yfVI~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yP 163 (362)
T d2pl5a1 84 NQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYP 163 (362)
T ss_dssp TTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHST
T ss_pred cccEEEeeccccCcccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCc
Confidence 469999999999987755432111 0 012368999999999999999999987 6699999999999999999
Q ss_pred cchhhceEeccCccccccCCCCCCCcchhHHHhhhhhh-----------------hhhHHHH-HHHhcChHHHHHHHHhc
Q 024971 76 EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN-----------------TAAGKLF-YKMVATSESVRNILCQC 137 (260)
Q Consensus 76 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-~~~~~~~~~~~~~~~~~ 137 (260)
+.|+++|.+++...... ....+.......+.. ....+.+ .......+.+...+...
T Consensus 164 d~v~~~v~ia~sa~~s~------~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~ 237 (362)
T d2pl5a1 164 NSLSNCIVMASTAEHSA------MQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRN 237 (362)
T ss_dssp TSEEEEEEESCCSBCCH------HHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTS
T ss_pred hHhhhhcccccccccCH------HHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccc
Confidence 99999999998753310 000000001111100 0011111 11123444444444332
Q ss_pred cCCCCccc-HHHHHHHhc----cCCccchHHHHHHHHhhhCCCCC------CccCCCCCCCEEEEecCCCCCCChHHHHH
Q 024971 138 YNDTSQVT-EELVEKILQ----PGLETGAADVFLEFICYSGGPLP------EELLPQVKCPVLIAWGDKDPWEPIELGRA 206 (260)
Q Consensus 138 ~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 206 (260)
........ ....+.++. ..........+..+.......+. .+.+++|++|+|+|..+.|.++|++..+.
T Consensus 238 ~~~~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~ 317 (362)
T d2pl5a1 238 PPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSRE 317 (362)
T ss_dssp CCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHH
T ss_pred cccccccchhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHH
Confidence 21111100 001111111 11222223333333322222221 23488999999999999999999999988
Q ss_pred hhccCCC----ccEEEeC-CCCCCcchhchhHHHHHHHHhhhh
Q 024971 207 YGNFDSV----EDFIVLP-NVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 207 ~~~~~~~----~~~~~~~-~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
+++.+|+ +++++++ ..||..++.+.+++.+.|.+||+.
T Consensus 318 ~a~~l~~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 318 IVKSLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp HHHHHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCeEEEEeCCCCCcchhccCHHHHHHHHHHHHcC
Confidence 8877654 4566675 479998888899999999999963
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.86 E-value=2.2e-21 Score=131.36 Aligned_cols=155 Identities=10% Similarity=0.074 Sum_probs=103.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
++||+|+++|+||+|.+ ..+++++.+...++..+ .+++++||||||.+++.++.++|+.....++
T Consensus 28 ~~G~~v~~~d~p~~~~~--------------~~~~~~~~l~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l 92 (186)
T d1uxoa_ 28 ADGVQADILNMPNPLQP--------------RLEDWLDTLSLYQHTLH-ENTYLVAHSLGCPAILRFLEHLQLRAALGGI 92 (186)
T ss_dssp HTTCEEEEECCSCTTSC--------------CHHHHHHHHHTTGGGCC-TTEEEEEETTHHHHHHHHHHTCCCSSCEEEE
T ss_pred hCCCEEEEeccCCCCcc--------------hHHHHHHHHHHHHhccC-CCcEEEEechhhHHHHHHHHhCCccceeeEE
Confidence 46899999999999854 35677777766665544 6899999999999999999999875433333
Q ss_pred eccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHH
Q 024971 84 LNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAAD 163 (260)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (260)
+.+...... . ........ +.... ..
T Consensus 93 ~~~~~~~~~------~--~~~~~~~~----------------------------~~~~~-~~------------------ 117 (186)
T d1uxoa_ 93 ILVSGFAKS------L--PTLQMLDE----------------------------FTQGS-FD------------------ 117 (186)
T ss_dssp EEETCCSSC------C--TTCGGGGG----------------------------GTCSC-CC------------------
T ss_pred eeccccccc------c--hhhhhhhh----------------------------hhccc-cc------------------
Confidence 333211100 0 00000000 00000 00
Q ss_pred HHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchh---chhHHHHHHHH
Q 024971 164 VFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS---LYLSLSSACLH 240 (260)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~p~~~~~~i~~ 240 (260)
.....++++|+++++|++|.++|.+..+.+++.. ++++++++++||+...+ .-.++.+.|.+
T Consensus 118 --------------~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~ 182 (186)
T d1uxoa_ 118 --------------HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTS 182 (186)
T ss_dssp --------------HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHHHH
T ss_pred --------------ccccccCCCCEEEEecCCCCCCCHHHHHHHHHHc-CCEEEEeCCCCCcCccccCcccHHHHHHHHH
Confidence 0111224589999999999999999999988877 58999999999987654 23578888988
Q ss_pred hhh
Q 024971 241 TLS 243 (260)
Q Consensus 241 ~l~ 243 (260)
|+.
T Consensus 183 ~~~ 185 (186)
T d1uxoa_ 183 YFS 185 (186)
T ss_dssp HHH
T ss_pred HHc
Confidence 885
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.84 E-value=1.1e-20 Score=132.18 Aligned_cols=181 Identities=13% Similarity=-0.039 Sum_probs=102.2
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-cCCceEEEEeChhhHHHHHHHhhCccchhhceE
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICNSIGGLVGLQAAVMEPEICRGMIL 83 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 83 (260)
.+|.|+++|++|+|. .++++.+.+.++ +.++++|+||||||.+|+.+|.++|+++..++.
T Consensus 41 ~~~~v~~~~~~g~~~-------------------~a~~~~~~i~~~~~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~ 101 (230)
T d1jmkc_ 41 PSYKLCAFDFIEEED-------------------RLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQR 101 (230)
T ss_dssp TTEEEEEECCCCSTT-------------------HHHHHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEeccCcCCHHH-------------------HHHHHHHHHHHhCCCCcEEEEeeccChHHHHHHHHhhhhhCcccee
Confidence 379999999998852 233344444444 567899999999999999999998877665544
Q ss_pred eccCccccccCCC---CCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCc-ccHHHHHHHhccCCcc
Q 024971 84 LNISLRMLHIKKQ---PWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQ-VTEELVEKILQPGLET 159 (260)
Q Consensus 84 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 159 (260)
+............ ..........+ ......... ..+.....+..
T Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~----- 149 (230)
T d1jmkc_ 102 IIMVDSYKKQGVSDLDGRTVESDVEAL---------------------------MNVNRDNEALNSEAVKHGLKQ----- 149 (230)
T ss_dssp EEEESCCEECCCC--------CCHHHH---------------------------HHHTTTCSGGGSHHHHHHHHH-----
T ss_pred eecccccCccchhhhhhhhhhhhhhhh---------------------------hhccccccccccHHHHHHHHH-----
Confidence 4332211100000 00000000000 000001111 11111111110
Q ss_pred chHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhch--hHHHHH
Q 024971 160 GAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLY--LSLSSA 237 (260)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p--~~~~~~ 237 (260)
........... ......+++|+++++|++|..++.....+.....++.++++++ +||+.++++| +++++.
T Consensus 150 ----~~~~~~~~~~~---~~~~~~i~~p~l~i~g~~D~~~~~~~~~w~~~~~~~~~~~~i~-g~H~~ml~~~~~~~va~~ 221 (230)
T d1jmkc_ 150 ----KTHAFYSYYVN---LISTGQVKADIDLLTSGADFDIPEWLASWEEATTGAYRMKRGF-GTHAEMLQGETLDRNAGI 221 (230)
T ss_dssp ----HHHHHHHHHHH---CCCCSCBSSEEEEEECSSCCCCCTTEECSGGGBSSCEEEEECS-SCGGGTTSHHHHHHHHHH
T ss_pred ----HHHHHHHhhhc---ccccccccCcceeeeecCCcccchhHHHHHHhccCCcEEEEEc-CCChhhcCCccHHHHHHH
Confidence 01111111100 2345678999999999999988865443333334567888898 5999888765 899999
Q ss_pred HHHhhhh
Q 024971 238 CLHTLSY 244 (260)
Q Consensus 238 i~~~l~~ 244 (260)
|.+||+.
T Consensus 222 I~~~L~~ 228 (230)
T d1jmkc_ 222 LLEFLNT 228 (230)
T ss_dssp HHHHHTC
T ss_pred HHHHHhh
Confidence 9999974
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.82 E-value=6.6e-20 Score=122.78 Aligned_cols=146 Identities=12% Similarity=0.014 Sum_probs=114.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC--ccchhhc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME--PEICRGM 81 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~l 81 (260)
++||.|+.+|.+|++.+.... ..+.+++++++.+++++++.++++++||||||.++..++.++ |++|+++
T Consensus 27 ~~g~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~ 98 (179)
T d1ispa_ 27 SQGWSRDKLYAVDFWDKTGTN--------YNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANV 98 (179)
T ss_dssp HTTCCGGGEEECCCSCTTCCH--------HHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEE
T ss_pred HcCCeEEEEecCCcccccccc--------chhhhhHHHHHHHHHHhcCCceEEEEeecCcCHHHHHHHHHcCCchhhCEE
Confidence 357999999999999887643 356778888999999999999999999999999999999876 6789999
Q ss_pred eEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccch
Q 024971 82 ILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGA 161 (260)
Q Consensus 82 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (260)
|+++++....... ..
T Consensus 99 V~l~~p~~g~~~~------------------------------------------------~l----------------- 113 (179)
T d1ispa_ 99 VTLGGANRLTTGK------------------------------------------------AL----------------- 113 (179)
T ss_dssp EEESCCGGGTCSB------------------------------------------------CC-----------------
T ss_pred EEECCCCCCchhh------------------------------------------------hc-----------------
Confidence 9999863211000 00
Q ss_pred HHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHh
Q 024971 162 ADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHT 241 (260)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 241 (260)
........+|++.++|+.|.++++... ..++++.+.+++.+|..+..+| ++.+.|.+|
T Consensus 114 ----------------~~~~~~~~~~~~~i~~~~D~~v~~~~~-----~l~~~~~~~~~~~~H~~l~~~~-~v~~~i~~~ 171 (179)
T d1ispa_ 114 ----------------PGTDPNQKILYTSIYSSADMIVMNYLS-----RLDGARNVQIHGVGHIGLLYSS-QVNSLIKEG 171 (179)
T ss_dssp ----------------CCSCTTCCCEEEEEEETTCSSSCHHHH-----CCBTSEEEEESSCCTGGGGGCH-HHHHHHHHH
T ss_pred ----------------CCcccccCceEEEEEecCCcccCchhh-----cCCCceEEEECCCCchhhccCH-HHHHHHHHH
Confidence 001122358999999999999997654 3577888899999999888877 688889888
Q ss_pred hhh
Q 024971 242 LSY 244 (260)
Q Consensus 242 l~~ 244 (260)
|+.
T Consensus 172 L~~ 174 (179)
T d1ispa_ 172 LNG 174 (179)
T ss_dssp HTT
T ss_pred Hhc
Confidence 864
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.2e-19 Score=130.50 Aligned_cols=69 Identities=13% Similarity=-0.019 Sum_probs=52.2
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH-HHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLND-FCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
+++|+++|+||+|.|+ ++++++++... +.+..+.++++|+||||||.+|+.+|.++|+++.+++++
T Consensus 49 ~~~v~~~d~~g~~~~~-------------~~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l 115 (286)
T d1xkta_ 49 SIPTYGLQCTRAAPLD-------------SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTH 115 (286)
T ss_dssp SSCEEEECCCTTSCCS-------------CHHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------C
T ss_pred CCeEEEEeCCCCCCCC-------------CHHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeE
Confidence 5899999999998764 45677777654 445557789999999999999999999999999998877
Q ss_pred ccC
Q 024971 85 NIS 87 (260)
Q Consensus 85 ~~~ 87 (260)
+..
T Consensus 116 ~~~ 118 (286)
T d1xkta_ 116 NSL 118 (286)
T ss_dssp CEE
T ss_pred EEe
Confidence 654
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.79 E-value=6e-18 Score=123.79 Aligned_cols=191 Identities=16% Similarity=0.054 Sum_probs=106.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCC-----------CCCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHH
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFF-----------DKPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLV 66 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~ 66 (260)
++||.|+++|+||||.|......... ............|....++.+ ...++.++|+|+||..
T Consensus 107 ~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~ 186 (318)
T d1l7aa_ 107 LHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGL 186 (318)
T ss_dssp HTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHH
T ss_pred HCCCEEEEEeeCCCCCCCCCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHH
Confidence 47999999999999999875432110 001112233344444444333 2246889999999999
Q ss_pred HHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhh-hHHHHHHHhcChHHHHHHHHhccCCCCccc
Q 024971 67 GLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTA-AGKLFYKMVATSESVRNILCQCYNDTSQVT 145 (260)
Q Consensus 67 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (260)
++..+...+. +.+++...+..... ............ ............
T Consensus 187 ~~~~~~~~~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 235 (318)
T d1l7aa_ 187 TIAAAALSDI-PKAAVADYPYLSNF------------ERAIDVALEQPYLEINSFFRRNGSP------------------ 235 (318)
T ss_dssp HHHHHHHCSC-CSEEEEESCCSCCH------------HHHHHHCCSTTTTHHHHHHHHSCCH------------------
T ss_pred HHHHhhcCcc-cceEEEeccccccH------------HHHhhcccccccchhhhhhhccccc------------------
Confidence 9999998875 66666555542110 000000000000 000000000000
Q ss_pred HHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEEeCCCCC
Q 024971 146 EELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIVLPNVGH 224 (260)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH 224 (260)
..... .+ ...........++++++|+|+++|++|.++|++.++.+.+.++ +.++++++++||
T Consensus 236 ~~~~~-------------~~----~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH 298 (318)
T d1l7aa_ 236 ETEVQ-------------AM----KTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGH 298 (318)
T ss_dssp HHHHH-------------HH----HHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCS
T ss_pred ccccc-------------cc----ccccccccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCC
Confidence 00000 00 0000011123456789999999999999999999888877655 578999999999
Q ss_pred CcchhchhHHHHHHHHhh
Q 024971 225 CPQVSLYLSLSSACLHTL 242 (260)
Q Consensus 225 ~~~~~~p~~~~~~i~~~l 242 (260)
....+..+++.+.+.++|
T Consensus 299 ~~~~~~~~~~~~fl~~~L 316 (318)
T d1l7aa_ 299 EYIPAFQTEKLAFFKQIL 316 (318)
T ss_dssp SCCHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhC
Confidence 876554554444444443
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.78 E-value=2.8e-19 Score=109.90 Aligned_cols=66 Identities=20% Similarity=0.299 Sum_probs=60.2
Q ss_pred CCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc
Q 024971 1 MVLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 1 ~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
+.|+++|+|+++|+||||.|+.+ .++.+++++++.++++++++++++++||||||.+++.+++..+
T Consensus 36 ~~L~~~yrvi~~DlpG~G~S~~p---------~~s~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~ 101 (122)
T d2dsta1 36 EALPEGYAFYLLDLPGYGRTEGP---------RMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGL 101 (122)
T ss_dssp SCCCTTSEEEEECCTTSTTCCCC---------CCCHHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTC
T ss_pred ccccCCeEEEEEeccccCCCCCc---------ccccchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhcc
Confidence 46889999999999999999754 3689999999999999999999999999999999999998654
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.78 E-value=4.8e-18 Score=119.24 Aligned_cols=171 Identities=13% Similarity=0.007 Sum_probs=96.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHH-------HHHHHH---hhcCCceEEEEeChhhHHHHHHHhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQ-------LNDFCK---DVVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
++||.|+++|+||||.|........ ..........+ +..++. .....++.++|||+||.+++.++..
T Consensus 49 ~~G~~V~~~D~~g~g~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~ 125 (238)
T d1ufoa_ 49 ERGFLLLAFDAPRHGEREGPPPSSK---SPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAE 125 (238)
T ss_dssp GGTEEEEECCCTTSTTSSCCCCCTT---STTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHT
T ss_pred HCCCEEEEecCCCCCCCcccccccc---cchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhc
Confidence 4699999999999999976553211 11122222222 222222 2234689999999999999999999
Q ss_pred CccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHh
Q 024971 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (260)
Q Consensus 74 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (260)
+|+ +++++.+.+......... .... ..........
T Consensus 126 ~p~-~~~~~~~~~~~~~~~~~~---~~~~-----------------------------------------~~~~~~~~~~ 160 (238)
T d1ufoa_ 126 GFR-PRGVLAFIGSGFPMKLPQ---GQVV-----------------------------------------EDPGVLALYQ 160 (238)
T ss_dssp TCC-CSCEEEESCCSSCCCCCT---TCCC-----------------------------------------CCHHHHHHHH
T ss_pred Ccc-hhheeeeeeecccccccc---cccc-----------------------------------------ccccccchhh
Confidence 986 555554443322110000 0000 0000000000
Q ss_pred ccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC----C--CccEEEeCCCCCCcc
Q 024971 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD----S--VEDFIVLPNVGHCPQ 227 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~--~~~~~~~~~~gH~~~ 227 (260)
. .......+..++|+++++|++|.++|.+....+.+.+ . +.++.+++|+||...
T Consensus 161 ~--------------------~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~ 220 (238)
T d1ufoa_ 161 A--------------------PPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLT 220 (238)
T ss_dssp S--------------------CGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCC
T ss_pred h--------------------hhhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccC
Confidence 0 0001122334689999999999999998876655432 2 356788899999876
Q ss_pred hhchhHHHHHHHHhh
Q 024971 228 VSLYLSLSSACLHTL 242 (260)
Q Consensus 228 ~~~p~~~~~~i~~~l 242 (260)
-+.-++..+.+.+||
T Consensus 221 ~~~~~~~~~f~~~~l 235 (238)
T d1ufoa_ 221 PLMARVGLAFLEHWL 235 (238)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 444344444444443
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.77 E-value=1.2e-18 Score=123.11 Aligned_cols=182 Identities=11% Similarity=0.080 Sum_probs=113.0
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHH-HhhcCCceEEEEeChhhHHHHHHHhhCcc---c
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFC-KDVVKDQAFFICNSIGGLVGLQAAVMEPE---I 77 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~ 77 (260)
.|...+.|+++|+||+|.++... .+++++++++.+.| +..+..+++|+||||||.+|+.+|.+.++ +
T Consensus 66 ~L~~~~~V~al~~pG~~~~e~~~---------~s~~~~a~~~~~~i~~~~~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~ 136 (255)
T d1mo2a_ 66 ALRGIAPVRAVPQPGYEEGEPLP---------SSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHP 136 (255)
T ss_dssp HHTTTCCEEEECCTTSSTTCCEE---------SSHHHHHHHHHHHHHHTTSSSCEEEEECSTTHHHHHHHHHHHHHHTCC
T ss_pred hcCCCceEEEEeCCCcCCCCCCC---------CCHHHHHHHHHHHHHHhCCCCCEEEEEeCCcHHHHHHHHHhhHhcCCC
Confidence 35677999999999999886543 58999999987666 44567899999999999999999987654 4
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC-CCCcccHHHHHHHhccC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN-DTSQVTEELVEKILQPG 156 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 156 (260)
|.+++++++..... ....... .......... ............+
T Consensus 137 v~~lvlld~~~p~~------------~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~l~a~---- 181 (255)
T d1mo2a_ 137 PRGVVLIDVYPPGH------------QDAMNAW-------------------LEELTATLFDRETVRMDDTRLTAL---- 181 (255)
T ss_dssp CSEEEEEECSCSSH------------HHHHHHH-------------------HHHHHTTCC----CCCCHHHHHHH----
T ss_pred ccEEEEECCCCCCC------------ccchhhH-------------------HHHHHHHhhccccccCCHHHHHHH----
Confidence 88999999854211 0000000 0000000000 0011112111111
Q ss_pred CccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccC-CCccEEEeCCCCCCc-chhchhHH
Q 024971 157 LETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFD-SVEDFIVLPNVGHCP-QVSLYLSL 234 (260)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~-~~~~p~~~ 234 (260)
..+...... .....+++|++++.+++|...... ..+.... ...+++.++| +|+. +.++++++
T Consensus 182 ------~~~~~~~~~-------~~~~~~~~p~l~v~a~~~~~~~~~--~~w~~~~~~~~~~~~v~G-~H~~ml~~~~~~~ 245 (255)
T d1mo2a_ 182 ------GAYDRLTGQ-------WRPRETGLPTLLVSAGEPMGPWPD--DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAI 245 (255)
T ss_dssp ------HHHHHHHHH-------CCCCCCCCCEEEEECCSSSSCCTT--CCCCCCCCSSCEEEECCS-CCSSCSSCCHHHH
T ss_pred ------HHHHHHHhc-------CCCccccceEEEeecCCCCCcchh--hHHHHhCCCCcEEEEECC-CCcccccccHHHH
Confidence 111111111 123467899999999888643322 2344443 4578888995 8984 45689999
Q ss_pred HHHHHHhhh
Q 024971 235 SSACLHTLS 243 (260)
Q Consensus 235 ~~~i~~~l~ 243 (260)
++.|.+||.
T Consensus 246 A~~i~~~L~ 254 (255)
T d1mo2a_ 246 ARHIDAWLG 254 (255)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 999999985
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.73 E-value=4.5e-18 Score=120.93 Aligned_cols=185 Identities=14% Similarity=0.126 Sum_probs=112.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCC-CCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhce
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDF-FDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMI 82 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 82 (260)
++||.|+++|+||+|.+........ .......++++.+.+..+.+....+++.++|+|+||..++.++..+|+.+++++
T Consensus 66 ~~G~~v~~~d~r~~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i 145 (260)
T d2hu7a2 66 AAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGV 145 (260)
T ss_dssp HHTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEE
T ss_pred hhccccccceeeeccccccccccccccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCccccccc
Confidence 4699999999999977644211000 000111233333333333333345678999999999999999999999999998
Q ss_pred EeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchH
Q 024971 83 LLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 162 (260)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
..++..... .+... ............... ..+....
T Consensus 146 ~~~~~~~~~--------------~~~~~---------------~~~~~~~~~~~~~~~----~~~~~~~----------- 181 (260)
T d2hu7a2 146 AGASVVDWE--------------EMYEL---------------SDAAFRNFIEQLTGG----SREIMRS----------- 181 (260)
T ss_dssp EESCCCCHH--------------HHHHT---------------CCHHHHHHHHHHHCS----CHHHHHH-----------
T ss_pred ccccchhhh--------------hhhcc---------------ccccccccccccccc----ccccccc-----------
Confidence 888764221 00000 001111111110000 0011000
Q ss_pred HHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhc----cCCCccEEEeCCCCCCc-chhchhHHHHH
Q 024971 163 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCP-QVSLYLSLSSA 237 (260)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~gH~~-~~~~p~~~~~~ 237 (260)
..+...++++++|+|+++|++|..+|.+.+..+.+ ....+++++++|+||.+ ..++..++.+.
T Consensus 182 ------------~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~ 249 (260)
T d2hu7a2 182 ------------RSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLP 249 (260)
T ss_dssp ------------TCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHH
T ss_pred ------------cchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHH
Confidence 11134467788999999999999999988777654 34557899999999965 44667777777
Q ss_pred HHHhhhh
Q 024971 238 CLHTLSY 244 (260)
Q Consensus 238 i~~~l~~ 244 (260)
+.+||+.
T Consensus 250 ~~~fl~~ 256 (260)
T d2hu7a2 250 AVFFLAT 256 (260)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7888854
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.71 E-value=1.5e-16 Score=116.58 Aligned_cols=175 Identities=14% Similarity=0.110 Sum_probs=99.0
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCC------------------CCCCccHHHHHHHHHHHHHhh------cCCceEEEE
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFF------------------DKPFYTFETWASQLNDFCKDV------VKDQAFFIC 59 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG 59 (260)
++||.|+++|+||||.|......... ..........+.|+...++.+ ..+++.++|
T Consensus 106 ~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G 185 (322)
T d1vlqa_ 106 SMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAG 185 (322)
T ss_dssp HTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEE
T ss_pred hCCCEEEEeeccccCCCCCCccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccc
Confidence 57999999999999999664321100 001112233344555555444 224689999
Q ss_pred eChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccC
Q 024971 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYN 139 (260)
Q Consensus 60 hS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (260)
+|+||.+++..+...| ++++++...+..... ............. .........
T Consensus 186 ~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~~-------------~~~~~~~~~~~~~-----------~~~~~~~~~-- 238 (322)
T d1vlqa_ 186 GSQGGGIALAVSALSK-KAKALLCDVPFLCHF-------------RRAVQLVDTHPYA-----------EITNFLKTH-- 238 (322)
T ss_dssp ETHHHHHHHHHHHHCS-SCCEEEEESCCSCCH-------------HHHHHHCCCTTHH-----------HHHHHHHHC--
T ss_pred cccchHHHHHHHhcCC-CccEEEEeCCccccH-------------HHHHhhccccchh-----------hHHhhhhcC--
Confidence 9999999998888776 588887766543110 0000000000000 000000000
Q ss_pred CCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCC-CccEEE
Q 024971 140 DTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDS-VEDFIV 218 (260)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~ 218 (260)
........... . ..+......++++|+|+++|++|.++|++.+..+.+.++ .+++++
T Consensus 239 --~~~~~~~~~~~-----------------~---~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~ 296 (322)
T d1vlqa_ 239 --RDKEEIVFRTL-----------------S---YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRI 296 (322)
T ss_dssp --TTCHHHHHHHH-----------------H---TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEE
T ss_pred --cchhhhHHHHh-----------------h---hhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEE
Confidence 00000110000 0 011123356788999999999999999998887666543 578999
Q ss_pred eCCCCCCcc
Q 024971 219 LPNVGHCPQ 227 (260)
Q Consensus 219 ~~~~gH~~~ 227 (260)
++++||...
T Consensus 297 ~p~~~H~~~ 305 (322)
T d1vlqa_ 297 YPYNNHEGG 305 (322)
T ss_dssp ETTCCTTTT
T ss_pred ECCCCCCCc
Confidence 999999543
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.71 E-value=5.5e-16 Score=106.75 Aligned_cols=146 Identities=16% Similarity=0.110 Sum_probs=104.8
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh---hc--CCceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD---VV--KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
..||.|+.+|+||.|.|..... ... .-.+|..++++. .. ..+++++|+|+||.+++.++.+.+. +
T Consensus 54 ~~G~~~lrfn~RG~g~S~G~~~------~~~---~e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~-~ 123 (218)
T d2i3da1 54 KRGFTTLRFNFRSIGRSQGEFD------HGA---GELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-I 123 (218)
T ss_dssp HTTCEEEEECCTTSTTCCSCCC------SSH---HHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-E
T ss_pred hcCeeEEEEecCccCCCccccc------cch---hHHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhcc-c
Confidence 4699999999999999987652 111 222333333333 22 3578999999999999999988754 6
Q ss_pred hhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCc
Q 024971 79 RGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158 (260)
Q Consensus 79 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
.+++++.+.....
T Consensus 124 ~~~~~~~~~~~~~------------------------------------------------------------------- 136 (218)
T d2i3da1 124 EGFMSIAPQPNTY------------------------------------------------------------------- 136 (218)
T ss_dssp EEEEEESCCTTTS-------------------------------------------------------------------
T ss_pred cceeecccccccc-------------------------------------------------------------------
Confidence 6777777652110
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc-----CCCccEEEeCCCCCCcchhchhH
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-----DSVEDFIVLPNVGHCPQVSLYLS 233 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~-----~~~~~~~~~~~~gH~~~~~~p~~ 233 (260)
....+....+|+++++|++|.+++......+.+. ....++++++|++|++. .+-++
T Consensus 137 ------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~ 197 (218)
T d2i3da1 137 ------------------DFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDE 197 (218)
T ss_dssp ------------------CCTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHH
T ss_pred ------------------chhhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCHHH
Confidence 0123445678999999999999998877665432 23458899999999865 66789
Q ss_pred HHHHHHHhhhhc
Q 024971 234 LSSACLHTLSYL 245 (260)
Q Consensus 234 ~~~~i~~~l~~~ 245 (260)
+.+.+.+||++.
T Consensus 198 l~~~v~~~l~~~ 209 (218)
T d2i3da1 198 LMGECEDYLDRR 209 (218)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999643
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.68 E-value=3.5e-19 Score=130.40 Aligned_cols=209 Identities=16% Similarity=0.107 Sum_probs=111.2
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCcc-chh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPE-ICR 79 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~-~v~ 79 (260)
+++||+|+++|+||||.|..+. ...+..++++++.+.++.+.. .+..++|||+||.++..++...+. ...
T Consensus 89 ~~~Gy~V~~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~ 161 (318)
T d1qlwa_ 89 LRKGYSTYVIDQSGRGRSATDI-------SAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQ 161 (318)
T ss_dssp HHTTCCEEEEECTTSTTSCCCC-------HHHHHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGH
T ss_pred HhCCCEEEEecCCCCCCCCCcc-------ccCCHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccc
Confidence 4689999999999999998754 345566666666666665543 356778999999999888766533 333
Q ss_pred hceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCC-CCcccHHHHHHHhccCCc
Q 024971 80 GMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYND-TSQVTEELVEKILQPGLE 158 (260)
Q Consensus 80 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 158 (260)
.+++.++.+........ ............ ... ....... ..................
T Consensus 162 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (318)
T d1qlwa_ 162 AELWQQMVPDWLGSMPT---PNPTVANLSKLA---------IKL----------DGTVLLSHSQSGIYPFQTAAMNPKGI 219 (318)
T ss_dssp HHHHHHCCCBCGGGSCS---SCHHHHHHHHHH---------HHH----------TSEEEEEEGGGTTHHHHHHHHCCTTE
T ss_pred eeeEeccccccccchhh---hhhhHHHHHHHH---------hhh----------ccccchhhhcccchhhhhhhhhhhHH
Confidence 33333333211100000 000000000000 000 0000000 000000000000000000
Q ss_pred cchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHH---------HHhhccCCCccEEEeC-----CCCC
Q 024971 159 TGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELG---------RAYGNFDSVEDFIVLP-----NVGH 224 (260)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~---------~~~~~~~~~~~~~~~~-----~~gH 224 (260)
..... ...............+++|+|+++|++|..+|.... ..+.+..++++++.++ |+||
T Consensus 220 ~~~~~-----~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH 294 (318)
T d1qlwa_ 220 TAIVS-----VEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSH 294 (318)
T ss_dssp EEEEE-----ESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCT
T ss_pred HHHHh-----hhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCCcEEEEecccccCCCcC
Confidence 00000 000011122345567789999999999999985322 2244456778888865 6789
Q ss_pred Ccchhc-hhHHHHHHHHhhhhc
Q 024971 225 CPQVSL-YLSLSSACLHTLSYL 245 (260)
Q Consensus 225 ~~~~~~-p~~~~~~i~~~l~~~ 245 (260)
+++.|. ++++++.|.+||++-
T Consensus 295 ~~~~e~~~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 295 MMMQDRNNLQVADLILDWIGRN 316 (318)
T ss_dssp TGGGSTTHHHHHHHHHHHHHHT
T ss_pred ccccCcCHHHHHHHHHHHHHhc
Confidence 998886 489999999999764
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.64 E-value=6e-16 Score=109.54 Aligned_cols=142 Identities=16% Similarity=0.156 Sum_probs=98.5
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh------hcCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD------VVKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
+.||.|+++|++|++.... ....++.+.+..+.+. ++.+++.++|||+||..++.++...+ +
T Consensus 77 ~~Gy~V~~~d~~~~~~~~~-----------~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~ 144 (260)
T d1jfra_ 77 SQGFVVFTIDTNTTLDQPD-----------SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-S 144 (260)
T ss_dssp TTTCEEEEECCSSTTCCHH-----------HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-T
T ss_pred hCCCEEEEEeeCCCcCCch-----------hhHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-c
Confidence 5799999999998764421 1112222222222221 23458999999999999999998886 5
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
++++|.+++...
T Consensus 145 ~~A~v~~~~~~~-------------------------------------------------------------------- 156 (260)
T d1jfra_ 145 LKAAIPLTGWNT-------------------------------------------------------------------- 156 (260)
T ss_dssp CSEEEEESCCCS--------------------------------------------------------------------
T ss_pred chhheeeecccc--------------------------------------------------------------------
Confidence 777777766310
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHH-HHHhhccC---CCccEEEeCCCCCCcchhchhH
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIEL-GRAYGNFD---SVEDFIVLPNVGHCPQVSLYLS 233 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~---~~~~~~~~~~~gH~~~~~~p~~ 233 (260)
...+.++++|+|+++|++|.++|.+. .+.+.+.. ...++++++|++|.........
T Consensus 157 --------------------~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~ 216 (260)
T d1jfra_ 157 --------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTT 216 (260)
T ss_dssp --------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHH
T ss_pred --------------------cccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHH
Confidence 11234577999999999999999764 34444432 2356889999999887777778
Q ss_pred HHHHHHHhhhhc
Q 024971 234 LSSACLHTLSYL 245 (260)
Q Consensus 234 ~~~~i~~~l~~~ 245 (260)
+.+.+..|++..
T Consensus 217 ~~~~~~~wl~~~ 228 (260)
T d1jfra_ 217 IAKYSISWLKRF 228 (260)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888998754
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.63 E-value=1.7e-14 Score=102.11 Aligned_cols=180 Identities=10% Similarity=-0.036 Sum_probs=103.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----c--CCceEEEEeChhhHHHHHHHhhCccc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----V--KDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
.+||.|+.+|+||+|.+........ ...+... ..+++...++.+ . .+++.++|+|+||.+++.++..+|+.
T Consensus 62 ~~g~~V~~~d~rg~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~ 138 (258)
T d2bgra2 62 TENIIVASFDGRGSGYQGDKIMHAI--NRRLGTF-EVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGV 138 (258)
T ss_dssp TTCCEEEEECCTTCSSSCHHHHGGG--TTCTTSH-HHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSC
T ss_pred cCCcEEEeecccccCCcchHHHHhh--hhhhhhH-HHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCc
Confidence 4799999999999875532110000 0111111 223333344433 2 23699999999999999999999987
Q ss_pred hhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCC
Q 024971 78 CRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGL 157 (260)
Q Consensus 78 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (260)
+...+..++..... ..... .... ..... ......+.....
T Consensus 139 ~~~~~~~~~~~~~~----------~~~~~------------~~~~------------~~~~~-~~~~~~~~~~~~----- 178 (258)
T d2bgra2 139 FKCGIAVAPVSRWE----------YYDSV------------YTER------------YMGLP-TPEDNLDHYRNS----- 178 (258)
T ss_dssp CSEEEEESCCCCGG----------GSBHH------------HHHH------------HHCCC-STTTTHHHHHHS-----
T ss_pred ceEEEEeecccccc----------ccccc------------ccch------------hcccc-cchhhHHHhhcc-----
Confidence 77666655542110 00000 0000 00000 000001110000
Q ss_pred ccchHHHHHHHHhhhCCCCCCccCCCC-CCCEEEEecCCCCCCChHHHHHhhc----cCCCccEEEeCCCCCCc-chhch
Q 024971 158 ETGAADVFLEFICYSGGPLPEELLPQV-KCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCP-QVSLY 231 (260)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~gH~~-~~~~p 231 (260)
.......++ ++|+++++|++|..+|...++++.+ ...+++++++++++|.. ..+..
T Consensus 179 ------------------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~ 240 (258)
T d2bgra2 179 ------------------TVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAH 240 (258)
T ss_dssp ------------------CSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHH
T ss_pred ------------------cccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccH
Confidence 001222333 3899999999999999887766543 34568999999999964 45567
Q ss_pred hHHHHHHHHhhhh
Q 024971 232 LSLSSACLHTLSY 244 (260)
Q Consensus 232 ~~~~~~i~~~l~~ 244 (260)
+++.+.+.+|+++
T Consensus 241 ~~~~~~i~~fl~~ 253 (258)
T d2bgra2 241 QHIYTHMSHFIKQ 253 (258)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7888888888864
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.61 E-value=5.2e-16 Score=110.34 Aligned_cols=64 Identities=13% Similarity=-0.000 Sum_probs=51.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
+.||.|+++|+|..+.... ...+++..+.+..+.+..+.++++++|||+||.+++.++...++.
T Consensus 65 ~~g~~v~~~dYrl~p~~~~----------~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~ 128 (263)
T d1vkha_ 65 ESTVCQYSIEYRLSPEITN----------PRNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDP 128 (263)
T ss_dssp TCCEEEEEECCCCTTTSCT----------THHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSC
T ss_pred hCCeEEEEeccccCcchhh----------hHHHHhhhhhhhcccccccccceeeeccCcHHHHHHHHHHhccCc
Confidence 5799999999997654432 235677777777778888888999999999999999999876653
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.5e-14 Score=100.31 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHhh-----cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhh
Q 024971 36 FETWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNL 110 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (260)
+++.++.+..+++.. ..++++++|+|+||.+|+.++.++|+++.+++.+++.......
T Consensus 89 i~~~~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~----------------- 151 (229)
T d1fj2a_ 89 IKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS----------------- 151 (229)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG-----------------
T ss_pred HHHHHHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccccccccc-----------------
Confidence 444445555555443 3458999999999999999999999999999998874311000
Q ss_pred hhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEE
Q 024971 111 LRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLI 190 (260)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 190 (260)
+. .........++|+++
T Consensus 152 ---------------------------~~------------------------------------~~~~~~~~~~~Pvli 168 (229)
T d1fj2a_ 152 ---------------------------FP------------------------------------QGPIGGANRDISILQ 168 (229)
T ss_dssp ---------------------------SC------------------------------------SSCCCSTTTTCCEEE
T ss_pred ---------------------------cc------------------------------------ccccccccccCceeE
Confidence 00 000111223589999
Q ss_pred EecCCCCCCChHHHHHhhcc------CCCccEEEeCCCCCCcchhchhHHHHHHHHhhhh
Q 024971 191 AWGDKDPWEPIELGRAYGNF------DSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLSY 244 (260)
Q Consensus 191 i~g~~D~~~~~~~~~~~~~~------~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~~ 244 (260)
++|++|.++|.+..+...+. ..+++++++++.||.+.. ++ .+.+.+||++
T Consensus 169 ~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~~---~~-~~~~~~wL~~ 224 (229)
T d1fj2a_ 169 CHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQ---QE-MMDVKQFIDK 224 (229)
T ss_dssp EEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCH---HH-HHHHHHHHHH
T ss_pred EEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccCH---HH-HHHHHHHHHh
Confidence 99999999999877654332 234678899999997653 23 3456677753
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.60 E-value=1.2e-15 Score=111.14 Aligned_cols=75 Identities=20% Similarity=0.290 Sum_probs=68.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
+||+|+++|+||+|.|+... ...+++++++.++++.++.+++++|||||||.++..++.++|++|+++|++
T Consensus 40 ~G~~V~~~~~~g~g~s~~~~---------~~~~~l~~~i~~~~~~~~~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i 110 (319)
T d1cvla_ 40 HGAKVYVANLSGFQSDDGPN---------GRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTI 110 (319)
T ss_dssp TTCCEEECCCBCSSCTTSTT---------SHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEecCCCCCCCCCCc---------ccHHHHHHHHHHHHHHhCCCCEEEEeccccHHHHHHHHHHCccccceEEEE
Confidence 57999999999999987644 367899999999999999999999999999999999999999999999999
Q ss_pred ccCc
Q 024971 85 NISL 88 (260)
Q Consensus 85 ~~~~ 88 (260)
+++.
T Consensus 111 ~~p~ 114 (319)
T d1cvla_ 111 GTPH 114 (319)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 9864
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.57 E-value=9.8e-15 Score=104.66 Aligned_cols=75 Identities=12% Similarity=0.066 Sum_probs=64.8
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCcc---chhh
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPE---ICRG 80 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~ 80 (260)
+.||+|+.+|+||+|.++.. .+.+++++.+..+++..+.+++.||||||||.++..++.++|+ +|+.
T Consensus 58 ~~Gy~v~~~d~~g~g~~d~~----------~sae~la~~i~~v~~~~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~ 127 (317)
T d1tcaa_ 58 QLGYTPCWISPPPFMLNDTQ----------VNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDR 127 (317)
T ss_dssp TTTCEEEEECCTTTTCSCHH----------HHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEE
T ss_pred hCCCeEEEecCCCCCCCchH----------hHHHHHHHHHHHHHHhccCCceEEEEeCchHHHHHHHHHHCCCcchheeE
Confidence 46899999999999987543 3677788888888888888999999999999999999999985 6999
Q ss_pred ceEeccCc
Q 024971 81 MILLNISL 88 (260)
Q Consensus 81 lvl~~~~~ 88 (260)
+|.++++.
T Consensus 128 ~v~i~~~~ 135 (317)
T d1tcaa_ 128 LMAFAPDY 135 (317)
T ss_dssp EEEESCCT
T ss_pred EEEeCCCC
Confidence 99999864
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.57 E-value=5.3e-13 Score=100.18 Aligned_cols=80 Identities=11% Similarity=-0.041 Sum_probs=64.6
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--------------------CceEEEEeCh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--------------------DQAFFICNSI 62 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~lvGhS~ 62 (260)
.++||.|+.+|.||+|.|++.. ...+.+ -++|..++++-+.. .+|.++|+|+
T Consensus 133 ~~~GYavv~~D~RG~g~S~G~~-------~~~~~~-e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY 204 (405)
T d1lnsa3 133 LTRGFASIYVAGVGTRSSDGFQ-------TSGDYQ-QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSY 204 (405)
T ss_dssp HTTTCEEEEECCTTSTTSCSCC-------CTTSHH-HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETH
T ss_pred HhCCCEEEEECCCCCCCCCCcc-------ccCChh-hhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCH
Confidence 3689999999999999999865 334444 36677777776632 2699999999
Q ss_pred hhHHHHHHHhhCccchhhceEeccCccc
Q 024971 63 GGLVGLQAAVMEPEICRGMILLNISLRM 90 (260)
Q Consensus 63 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 90 (260)
||..++.+|...|..++++|..++....
T Consensus 205 ~G~~q~~aA~~~pp~LkAivp~~~~~d~ 232 (405)
T d1lnsa3 205 LGTMAYGAATTGVEGLELILAEAGISSW 232 (405)
T ss_dssp HHHHHHHHHTTTCTTEEEEEEESCCSBH
T ss_pred HHHHHHHHHhcCCccceEEEecCccccH
Confidence 9999999999999889999998887654
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.56 E-value=2.3e-14 Score=99.67 Aligned_cols=156 Identities=13% Similarity=0.050 Sum_probs=97.5
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCC--------CCCCccHHHHHHHHHHHHHhhc-----CCceEEEEeChhhHHHHHH
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFF--------DKPFYTFETWASQLNDFCKDVV-----KDQAFFICNSIGGLVGLQA 70 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~lvGhS~Gg~~a~~~ 70 (260)
+.||.|+++|+.|.+........... .....+.+....|+...++.+. .+++.++|+|+||.+++.+
T Consensus 53 ~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~ 132 (233)
T d1dina_ 53 DQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLV 132 (233)
T ss_dssp HTTCEEEEECGGGGTSTTCBCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHH
T ss_pred hcCCcceeeeeccCCCcCcccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeec
Confidence 36999999999876655432210000 0012234445566666666552 2379999999999999998
Q ss_pred HhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHH
Q 024971 71 AVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVE 150 (260)
Q Consensus 71 a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (260)
+...+ +.+.+...+....
T Consensus 133 a~~~~--~~~~~~~~~~~~~------------------------------------------------------------ 150 (233)
T d1dina_ 133 AAKGY--VDRAVGYYGVGLE------------------------------------------------------------ 150 (233)
T ss_dssp HHHTC--SSEEEEESCSCGG------------------------------------------------------------
T ss_pred ccccc--cceeccccccccc------------------------------------------------------------
Confidence 87643 4444433221100
Q ss_pred HHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhc---cCCCccEEEeCCCCCCcc
Q 024971 151 KILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGN---FDSVEDFIVLPNVGHCPQ 227 (260)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~ 227 (260)
...+...++++|+++++|++|..+|.+..+.+.+ ..++.++++++|++|.+.
T Consensus 151 -------------------------~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~ 205 (233)
T d1dina_ 151 -------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFA 205 (233)
T ss_dssp -------------------------GGGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTT
T ss_pred -------------------------cchhhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCC
Confidence 0012344678999999999999999887766543 345678999999999654
Q ss_pred hhc--------hhHHHHHHHHhhhhcc
Q 024971 228 VSL--------YLSLSSACLHTLSYLH 246 (260)
Q Consensus 228 ~~~--------p~~~~~~i~~~l~~~~ 246 (260)
.+. .++..+.+.+|+..|+
T Consensus 206 ~~~~~~y~~~aa~~a~~r~~~ffa~~~ 232 (233)
T d1dina_ 206 RTSSSGYVASAAALANERTLDFLAPLQ 232 (233)
T ss_dssp CTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHcCc
Confidence 322 2233456667777665
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.55 E-value=5.1e-14 Score=96.26 Aligned_cols=109 Identities=18% Similarity=0.067 Sum_probs=75.7
Q ss_pred HHHHhhc--CCceEEEEeChhhHHHHHHHhhCccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHH
Q 024971 45 DFCKDVV--KDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYK 122 (260)
Q Consensus 45 ~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (260)
.+.++.+ .++++++|||+||.+++.++.++|+++.+++++++.....
T Consensus 94 ~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~------------------------------- 142 (209)
T d3b5ea1 94 EAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------------------------------- 142 (209)
T ss_dssp HHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS-------------------------------
T ss_pred HHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCccccc-------------------------------
Confidence 3444443 3589999999999999999999999999999998753110
Q ss_pred HhcChHHHHHHHHhccCCCCcccHHHHHHHhccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChH
Q 024971 123 MVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIE 202 (260)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 202 (260)
........++|+++++|++|.+++..
T Consensus 143 ------------------------------------------------------~~~~~~~~~~p~~~~~G~~D~~~~~~ 168 (209)
T d3b5ea1 143 ------------------------------------------------------HVPATDLAGIRTLIIAGAADETYGPF 168 (209)
T ss_dssp ------------------------------------------------------SCCCCCCTTCEEEEEEETTCTTTGGG
T ss_pred ------------------------------------------------------cccccccccchheeeeccCCCccCHH
Confidence 01112234689999999999998743
Q ss_pred H---HHHhhccCCCccEEEeCCCCCCcchhchhHHHHHHHHhhh
Q 024971 203 L---GRAYGNFDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 203 ~---~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~ 243 (260)
. .+.+.+...+++++++++ ||.+. +++ .+.+.+||.
T Consensus 169 ~~~~~~~l~~~G~~v~~~~~~g-gH~i~---~~~-~~~~~~wl~ 207 (209)
T d3b5ea1 169 VPALVTLLSRHGAEVDARIIPS-GHDIG---DPD-AAIVRQWLA 207 (209)
T ss_dssp HHHHHHHHHHTTCEEEEEEESC-CSCCC---HHH-HHHHHHHHH
T ss_pred HHHHHHHHHHCCCCeEEEEECC-CCCCC---HHH-HHHHHHHhC
Confidence 2 223444444578899986 89774 333 345677774
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=1.6e-14 Score=102.17 Aligned_cols=61 Identities=13% Similarity=0.014 Sum_probs=46.9
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhc----cCCCccEEEeCCCCCCcc-hhchhHHHHHHHHhhhhc
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQ-VSLYLSLSSACLHTLSYL 245 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~gH~~~-~~~p~~~~~~i~~~l~~~ 245 (260)
++|+|+++|+.|..+|++....+.+ ...+.+++++|+++|.+. .+....+.+.+.+|+++.
T Consensus 190 ~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~ 255 (258)
T d1xfda2 190 EQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 255 (258)
T ss_dssp SCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred cccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 6899999999999999887665443 345678999999999654 445666778888888653
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.49 E-value=7.3e-14 Score=95.06 Aligned_cols=151 Identities=13% Similarity=0.054 Sum_probs=94.6
Q ss_pred CCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHH---HHH----HHHHHhhc--CCceEEEEeChhhHHHHHHHhh
Q 024971 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWA---SQL----NDFCKDVV--KDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 3 L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~--~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
|++++.|++++.+..+.......... .....+.++.. +++ ..+.++.+ ..++.++|+|+||.+++.++..
T Consensus 37 l~~~~~vv~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~ 115 (202)
T d2h1ia1 37 VDSEASVLSVRGNVLENGMPRFFRRL-AEGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFH 115 (202)
T ss_dssp HHTTSCEEEECCSEEETTEEESSCEE-ETTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHH
T ss_pred hccCCceeeecccccCCCCccccccC-CCCCCchHHHHHHHHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHh
Confidence 45688899887654433211110000 00122333322 223 33334444 3589999999999999999999
Q ss_pred CccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHh
Q 024971 74 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKIL 153 (260)
Q Consensus 74 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (260)
+|+++.+++++++.....
T Consensus 116 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 133 (202)
T d2h1ia1 116 YENALKGAVLHHPMVPRR-------------------------------------------------------------- 133 (202)
T ss_dssp CTTSCSEEEEESCCCSCS--------------------------------------------------------------
T ss_pred ccccccceeeecCCCCcc--------------------------------------------------------------
Confidence 999999999888753110
Q ss_pred ccCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCcchh
Q 024971 154 QPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQVS 229 (260)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~~ 229 (260)
..........|+++++|++|.++|++..+.+.+. ..+.+++.+++ ||.+.
T Consensus 134 -----------------------~~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~~-- 187 (202)
T d2h1ia1 134 -----------------------GMQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENR-GHQLT-- 187 (202)
T ss_dssp -----------------------SCCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESS-TTSCC--
T ss_pred -----------------------cccccccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC--
Confidence 0112234468999999999999998877765544 33568888985 89764
Q ss_pred chhHHHHHHHHhhhh
Q 024971 230 LYLSLSSACLHTLSY 244 (260)
Q Consensus 230 ~p~~~~~~i~~~l~~ 244 (260)
.+..+.+.+|+++
T Consensus 188 --~~~~~~~~~wl~k 200 (202)
T d2h1ia1 188 --MGEVEKAKEWYDK 200 (202)
T ss_dssp --HHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHH
Confidence 3334556677753
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.48 E-value=2.4e-14 Score=102.02 Aligned_cols=72 Identities=15% Similarity=0.149 Sum_probs=65.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCccchhhceEe
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEPEICRGMILL 84 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 84 (260)
.||+|+++|++|+|.+. ...+++++++.++++.++.+++++|||||||.++..++.++|++|+++|.+
T Consensus 38 ~G~~v~~~~~~~~~~~~------------~~a~~l~~~i~~~~~~~g~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i 105 (285)
T d1ex9a_ 38 DGAQVYVTEVSQLDTSE------------VRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSV 105 (285)
T ss_dssp TTCCEEEECCCSSSCHH------------HHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCCEEEEeCCCCCCCcH------------HHHHHHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHHCCccceeEEEE
Confidence 58999999999998543 366788999999999999999999999999999999999999999999999
Q ss_pred ccCc
Q 024971 85 NISL 88 (260)
Q Consensus 85 ~~~~ 88 (260)
+++.
T Consensus 106 ~tPh 109 (285)
T d1ex9a_ 106 GAPH 109 (285)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 9864
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.47 E-value=2.9e-13 Score=92.07 Aligned_cols=152 Identities=18% Similarity=0.126 Sum_probs=99.6
Q ss_pred CCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccH---HHHHHHHHHHHH----hhcCCceEEEEeChhhHHHHHHHhhC
Q 024971 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTF---ETWASQLNDFCK----DVVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 2 ~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
.|.+++.|+.++.+..+.+......... ....+. ...++.+..+++ ..+.++++++|+|+||.+++.++..+
T Consensus 39 ~l~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~ 117 (203)
T d2r8ba1 39 RLLPQATILSPVGDVSEHGAARFFRRTG-EGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQ 117 (203)
T ss_dssp HHSTTSEEEEECCSEEETTEEESSCBCG-GGCBCHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHS
T ss_pred HhccCCeEEEeccccccccccccccccC-ccccchhHHHHHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhh
Confidence 3567888999987755444221110000 112222 333344444443 34667899999999999999999999
Q ss_pred ccchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc
Q 024971 75 PEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (260)
Q Consensus 75 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
|+.+.+++++++......
T Consensus 118 p~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 135 (203)
T d2r8ba1 118 PELFDAAVLMHPLIPFEP-------------------------------------------------------------- 135 (203)
T ss_dssp TTTCSEEEEESCCCCSCC--------------------------------------------------------------
T ss_pred hhcccceeeecccccccc--------------------------------------------------------------
Confidence 999999999998632100
Q ss_pred cCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhcc----CCCccEEEeCCCCCCcchhc
Q 024971 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF----DSVEDFIVLPNVGHCPQVSL 230 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~~~ 230 (260)
.........|+++++|++|.++|.+.++++.+. .-+++++++++ ||.+..
T Consensus 136 -----------------------~~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~~-- 189 (203)
T d2r8ba1 136 -----------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEIRS-- 189 (203)
T ss_dssp -----------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSCCH--
T ss_pred -----------------------ccccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcCCH--
Confidence 011123357999999999999999988776554 33468889986 898643
Q ss_pred hhHHHHHHHHhhhh
Q 024971 231 YLSLSSACLHTLSY 244 (260)
Q Consensus 231 p~~~~~~i~~~l~~ 244 (260)
++ .+.+.+||..
T Consensus 190 -~~-~~~~~~wl~~ 201 (203)
T d2r8ba1 190 -GE-IDAVRGFLAA 201 (203)
T ss_dssp -HH-HHHHHHHHGG
T ss_pred -HH-HHHHHHHHHh
Confidence 33 4556788764
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.40 E-value=2.9e-13 Score=99.89 Aligned_cols=81 Identities=17% Similarity=-0.028 Sum_probs=63.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCccchhhc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEPEICRGM 81 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 81 (260)
++||.|+++|.||+|.|+.... .....+....|+.+.+..... .++.++|+|+||.+++.+|...|..++++
T Consensus 60 ~~GY~vv~~d~RG~g~S~G~~~------~~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~ai 133 (347)
T d1ju3a2 60 RDGYAVVIQDTRGLFASEGEFV------PHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAI 133 (347)
T ss_dssp HTTCEEEEEECTTSTTCCSCCC------TTTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEB
T ss_pred HCCCEEEEEeeCCccccCCccc------cccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceee
Confidence 5799999999999999998652 233444445566666655532 48999999999999999999998889999
Q ss_pred eEeccCccc
Q 024971 82 ILLNISLRM 90 (260)
Q Consensus 82 vl~~~~~~~ 90 (260)
+...+....
T Consensus 134 v~~~~~~d~ 142 (347)
T d1ju3a2 134 APSMASADL 142 (347)
T ss_dssp CEESCCSCT
T ss_pred eeccccchh
Confidence 988887543
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.30 E-value=2.5e-12 Score=90.48 Aligned_cols=148 Identities=12% Similarity=0.072 Sum_probs=89.6
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCc-----
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEP----- 75 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p----- 75 (260)
++||.|+++|+|..+.. ++.+..+|+.+.++.+ ..++++++|||.||.++..++....
T Consensus 90 ~~G~~Vv~~~YRl~p~~--------------~~p~~~~d~~~a~~~~~~~~~~rI~l~G~SaGG~la~~~~~~~~~~~~~ 155 (261)
T d2pbla1 90 SKGWAVAMPSYELCPEV--------------RISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAV 155 (261)
T ss_dssp HTTEEEEEECCCCTTTS--------------CHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHH
T ss_pred cCCceeecccccccccc--------------cCchhHHHHHHHHHHHHhcccCceEEEEcchHHHHHHHHhcCcccccch
Confidence 47999999999965332 3444555555444443 2468999999999999987765432
Q ss_pred -cchhhceEeccCccccccCCCCCCCcchhHHHhhhhhhhhhHHHHHHHhcChHHHHHHHHhccCCCCcccHHHHHHHhc
Q 024971 76 -EICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQ 154 (260)
Q Consensus 76 -~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
..+++++.+++..... +... ...... + ....+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~----------~~~~--------~~~~~~--------------~--------~~~~~~~~~~-- 193 (261)
T d2pbla1 156 GARIRNVVPISPLSDLR----------PLLR--------TSMNEK--------------F--------KMDADAAIAE-- 193 (261)
T ss_dssp HTTEEEEEEESCCCCCG----------GGGG--------STTHHH--------------H--------CCCHHHHHHT--
T ss_pred hhchhhhhccccccccc----------hhhh--------hhhccc--------------c--------cCCHHHHHHh--
Confidence 2467777777654221 0000 000000 0 0001111000
Q ss_pred cCCccchHHHHHHHHhhhCCCCCCccCCCCCCCEEEEecCCCCCCChHHHHHhhccCCCccEEEeCCCCCCcchh
Q 024971 155 PGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQVS 229 (260)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 229 (260)
.+.....+.+.|+++++|++|..++.+.++.+.+.+. ++.+++++.+||-.++
T Consensus 194 ---------------------SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l~-~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 194 ---------------------SPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-ADHVIAFEKHHFNVIE 246 (261)
T ss_dssp ---------------------CGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-CEEEEETTCCTTTTTG
T ss_pred ---------------------CchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHhC-CCceEeCCCCchhHHH
Confidence 1123345667999999999998777777777776654 6788899999975543
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.23 E-value=4.7e-10 Score=83.25 Aligned_cols=86 Identities=10% Similarity=-0.162 Sum_probs=58.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCC--CCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhCc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFD--KPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
++||.|+.+|.||+|.|++........ .......+.++|..+.++.+ ...++.++|+|+||.+++.+|...|
T Consensus 86 ~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~ 165 (381)
T d1mpxa2 86 EGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPH 165 (381)
T ss_dssp HTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCC
T ss_pred hCCCEEEEEecCccCCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccc
Confidence 579999999999999998754211000 00001111234444443322 2348999999999999999999999
Q ss_pred cchhhceEeccCcc
Q 024971 76 EICRGMILLNISLR 89 (260)
Q Consensus 76 ~~v~~lvl~~~~~~ 89 (260)
..++++|...+...
T Consensus 166 ~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 166 PALKVAVPESPMID 179 (381)
T ss_dssp TTEEEEEEESCCCC
T ss_pred cccceeeeeccccc
Confidence 89999999888654
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.20 E-value=1.9e-10 Score=78.72 Aligned_cols=54 Identities=19% Similarity=0.117 Sum_probs=39.6
Q ss_pred CCCEEEEecCCCCCCChHHHHHhhc----cCCCccEEEeCCCCCCcchhchhHHHHHHHHhhh
Q 024971 185 KCPVLIAWGDKDPWEPIELGRAYGN----FDSVEDFIVLPNVGHCPQVSLYLSLSSACLHTLS 243 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~l~ 243 (260)
+.|+++++|++|.++|.+..+.+.+ ...++++++++ +||.... +..+.+.+||.
T Consensus 157 ~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~~----~~~~~i~~wl~ 214 (218)
T d1auoa_ 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLP----QEIHDIGAWLA 214 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCH----HHHHHHHHHHH
T ss_pred CCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCccCH----HHHHHHHHHHH
Confidence 4799999999999999987766444 33467888887 6897643 33455777774
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.08 E-value=1.3e-09 Score=78.88 Aligned_cols=61 Identities=10% Similarity=0.015 Sum_probs=40.3
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHH---HHHHhhcC--CceEEEEeChhhHHHHHHHhhCc
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLN---DFCKDVVK--DQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
.||.|+.+|+|.......+. .+++..+.+. +..+.++. ++++++|+|.||.+++.++.+.+
T Consensus 108 ~G~~V~~vdYrl~pe~~~~~----------~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~ 173 (317)
T d1lzla_ 108 LGFAVANVEYRLAPETTFPG----------PVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKAR 173 (317)
T ss_dssp HCCEEEEECCCCTTTSCTTH----------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHH
T ss_pred cCCccccccccccccccccc----------cccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhh
Confidence 38999999999865543322 2333333332 23334443 57999999999999998887644
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.02 E-value=7.1e-09 Score=76.21 Aligned_cols=79 Identities=11% Similarity=0.025 Sum_probs=50.4
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH---hhcCCceEEEEeChhhHHHHHHHhh-----Cc
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCK---DVVKDQAFFICNSIGGLVGLQAAVM-----EP 75 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~lvGhS~Gg~~a~~~a~~-----~p 75 (260)
..|+.|+++|+|..+...+..+ ....+++....+.-+.+ .++.++++++|+|.||.+++.++.. ..
T Consensus 136 ~~g~~VvsvdYRla~~~~pe~~------~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~ 209 (358)
T d1jkma_ 136 AAGSVVVMVDFRNAWTAEGHHP------FPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRL 209 (358)
T ss_dssp HTTCEEEEEECCCSEETTEECC------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCG
T ss_pred hhhheeeeeeecccccccccCC------CchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCC
Confidence 3689999999998754332211 12234444443333332 3466789999999999999877654 23
Q ss_pred cchhhceEeccCc
Q 024971 76 EICRGMILLNISL 88 (260)
Q Consensus 76 ~~v~~lvl~~~~~ 88 (260)
..+.++++..|..
T Consensus 210 ~~~~~~~~~~p~~ 222 (358)
T d1jkma_ 210 DAIDGVYASIPYI 222 (358)
T ss_dssp GGCSEEEEESCCC
T ss_pred cccccccccccee
Confidence 4567777777754
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.02 E-value=7.1e-10 Score=77.76 Aligned_cols=51 Identities=8% Similarity=0.044 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhh-----cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 38 TWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 38 ~~~~~~~~~~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
.+++++...++.. ..+++.++|+|+||..++.++.++|+++.+++.+++..
T Consensus 115 ~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~ 170 (255)
T d1jjfa_ 115 DLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 170 (255)
T ss_dssp HHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCc
Confidence 4444444444442 23469999999999999999999999999999998764
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.97 E-value=7.9e-09 Score=76.75 Aligned_cols=85 Identities=8% Similarity=-0.194 Sum_probs=57.9
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCCCC---CCCccHHHHHHHHHHHHHhh------cCCceEEEEeChhhHHHHHHHhhC
Q 024971 4 AKSHRVYSIDLIGYGYSDKPNPRDFFD---KPFYTFETWASQLNDFCKDV------VKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~S~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
++||.|+.+|.||+|.|.......... ...... .-++|..++++.+ ...++.++|+|+||..++.+|...
T Consensus 91 ~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~-~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~ 169 (385)
T d2b9va2 91 EGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKT-DETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDP 169 (385)
T ss_dssp HTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSC-CHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSC
T ss_pred hCCcEEEEEcCCcccCCCCceeeccccccccccchh-hHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhcc
Confidence 579999999999999998754211000 001111 1234444444433 224799999999999999999999
Q ss_pred ccchhhceEeccCcc
Q 024971 75 PEICRGMILLNISLR 89 (260)
Q Consensus 75 p~~v~~lvl~~~~~~ 89 (260)
|..+++++...+...
T Consensus 170 ~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 170 HPALKVAAPESPMVD 184 (385)
T ss_dssp CTTEEEEEEEEECCC
T ss_pred CCcceEEEEeccccc
Confidence 888999888777643
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.97 E-value=3.2e-09 Score=76.58 Aligned_cols=58 Identities=16% Similarity=0.056 Sum_probs=39.0
Q ss_pred CCCEEEEecCCCCCCChH--HHHHhhccCCCccEEEeCCCCCCcc-h----hchhHHHHHHHHhh
Q 024971 185 KCPVLIAWGDKDPWEPIE--LGRAYGNFDSVEDFIVLPNVGHCPQ-V----SLYLSLSSACLHTL 242 (260)
Q Consensus 185 ~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~-~----~~p~~~~~~i~~~l 242 (260)
..|+++++|+.|.+.+.. ..+.+.+....+++++++|++|... . +...+..+.|.+||
T Consensus 244 ~pP~li~~g~~D~l~d~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 244 LPPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp CCCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCChHHHHHHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 468999999999765422 2344555555689999999999433 2 23345556666665
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.88 E-value=1.6e-08 Score=70.36 Aligned_cols=51 Identities=24% Similarity=0.221 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhh-----cCCceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 38 TWASQLNDFCKDV-----VKDQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 38 ~~~~~~~~~~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
.+.+++..+++.. +.+++.++|+||||..++.++.++|+++.+++.+++..
T Consensus 103 ~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~ 158 (246)
T d3c8da2 103 AVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 158 (246)
T ss_dssp HHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred HHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCccc
Confidence 3345555555553 12568999999999999999999999999999999864
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.85 E-value=2.2e-09 Score=76.77 Aligned_cols=44 Identities=7% Similarity=-0.068 Sum_probs=33.9
Q ss_pred CCCCEEEEecCCCCCCChHHHHHhhccC----C--CccEEEeCCCCCCcc
Q 024971 184 VKCPVLIAWGDKDPWEPIELGRAYGNFD----S--VEDFIVLPNVGHCPQ 227 (260)
Q Consensus 184 i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~--~~~~~~~~~~gH~~~ 227 (260)
.+.|+++++|++|..+++...+.+.+.+ + +++++..+++||-..
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fp 138 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFP 138 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEE
T ss_pred CCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCC
Confidence 4589999999999999998877655542 2 345677899999654
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=98.82 E-value=2e-08 Score=72.25 Aligned_cols=59 Identities=14% Similarity=0.010 Sum_probs=39.2
Q ss_pred CCEEEEecCCCCCCCh--HHHHHhhccCCCccEEEeCCCCCCcch-----hchhHHHHHHHHhhhh
Q 024971 186 CPVLIAWGDKDPWEPI--ELGRAYGNFDSVEDFIVLPNVGHCPQV-----SLYLSLSSACLHTLSY 244 (260)
Q Consensus 186 ~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~p~~~~~~i~~~l~~ 244 (260)
.|+++++|++|.+++. ...+.+.+....+++++++|.+|.... ...++..+.+.+||++
T Consensus 240 Pp~li~~g~~D~l~~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~ 305 (308)
T d1u4na_ 240 PPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRD 305 (308)
T ss_dssp CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHH
T ss_pred CCeeEEecCcCCchHHHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHH
Confidence 5899999999976542 123335555556899999999995332 2234566667777753
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.70 E-value=4e-09 Score=73.57 Aligned_cols=79 Identities=14% Similarity=0.020 Sum_probs=55.9
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh--cCCceEEEEeChhhHHHHHHHhhCcc-chhhce
Q 024971 6 SHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV--VKDQAFFICNSIGGLVGLQAAVMEPE-ICRGMI 82 (260)
Q Consensus 6 ~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lv 82 (260)
|+.|+++++.....++... .....++++++.+.+.++.. +.+++++|||||||.++-.++.+++. .|..+|
T Consensus 37 G~~V~~l~~g~~~~~~~~~------~~~~~~~~~~e~v~~~I~~~~~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lI 110 (279)
T d1ei9a_ 37 GIHVLSLEIGKTLREDVEN------SFFLNVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLI 110 (279)
T ss_dssp TCCEEECCCSSSHHHHHHH------HHHSCHHHHHHHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEE
T ss_pred CeEEEEEEcCCCccccccc------chhhhHHHHHHHHHHHHHhccccccceeEEEEccccHHHHHHHHHcCCCCcceEE
Confidence 6677777765543332211 01235667777777777653 34689999999999999999999875 599999
Q ss_pred EeccCccc
Q 024971 83 LLNISLRM 90 (260)
Q Consensus 83 l~~~~~~~ 90 (260)
.++++-..
T Consensus 111 TLgsPH~G 118 (279)
T d1ei9a_ 111 SVGGQHQG 118 (279)
T ss_dssp EESCCTTC
T ss_pred EECCCCCC
Confidence 99987544
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.69 E-value=5.2e-07 Score=64.04 Aligned_cols=84 Identities=12% Similarity=-0.039 Sum_probs=55.9
Q ss_pred CccEEEEEcCCCCCCCCCCCCCC--CCCCCCccHH-HHHHHHHHHHHhh-c--CCceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRD--FFDKPFYTFE-TWASQLNDFCKDV-V--KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~-~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.++.|++++..+.+......... .........+ .+++++...+++. + .+++.+.|+||||..|+.++.++|+++
T Consensus 65 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f 144 (288)
T d1sfra_ 65 SGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQF 144 (288)
T ss_dssp SSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred CCCEEEEeccCCCCCCccccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccc
Confidence 57888899887765443322100 0000112223 3455666555443 3 357999999999999999999999999
Q ss_pred hhceEeccCc
Q 024971 79 RGMILLNISL 88 (260)
Q Consensus 79 ~~lvl~~~~~ 88 (260)
.+++.+++..
T Consensus 145 ~av~~~Sg~~ 154 (288)
T d1sfra_ 145 VYAGAMSGLL 154 (288)
T ss_dssp EEEEEESCCS
T ss_pred cEEEEecCcc
Confidence 9999999864
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.67 E-value=4.1e-07 Score=64.08 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=30.0
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
....++|+|.||..+...+...++.+.+++...+..
T Consensus 116 ~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 151 (280)
T d1qfma2 116 KRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVM 151 (280)
T ss_dssp GGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCC
T ss_pred ccccccccccccchhhhhhhcccchhhheeeecccc
Confidence 467889999999999999999998877777776654
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.67 E-value=8.1e-07 Score=67.27 Aligned_cols=80 Identities=16% Similarity=0.068 Sum_probs=55.9
Q ss_pred CccEEEEEcCC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHhh---
Q 024971 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM--- 73 (260)
Q Consensus 5 ~~~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~~--- 73 (260)
+-.+++-+|.| |.|.|..... ....+..+.+.|+.++++.+ ...+++|.|-|+||..+-.+|..
T Consensus 91 ~~anllfIDqPvGtGfS~~~~~-----~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~ 165 (452)
T d1ivya_ 91 LIANVLYLESPAGVGFSYSDDK-----FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQ 165 (452)
T ss_dssp GSSEEEEECCSTTSTTCEESSC-----CCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTT
T ss_pred cccCEEEEecCCCcccccCCCC-----CCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHh
Confidence 45689999986 9999965432 12345566666665555433 33589999999999988887754
Q ss_pred -CccchhhceEeccCcc
Q 024971 74 -EPEICRGMILLNISLR 89 (260)
Q Consensus 74 -~p~~v~~lvl~~~~~~ 89 (260)
.+-.++|+++.++...
T Consensus 166 ~~~i~l~Gi~igng~~d 182 (452)
T d1ivya_ 166 DPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp CTTSCEEEEEEESCCSB
T ss_pred cCcccccceEcCCCccC
Confidence 2234889999988754
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.59 E-value=1e-05 Score=60.39 Aligned_cols=80 Identities=11% Similarity=-0.059 Sum_probs=56.5
Q ss_pred CccEEEEEcCC-CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh---------cCCceEEEEeChhhHHHHHHHhhC
Q 024971 5 KSHRVYSIDLI-GYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV---------VKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 5 ~~~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
+-.+++-+|.| |.|.|-...+ ...+-.+.++|+.++++.. ...+++|.|-|+||..+-.+|.+.
T Consensus 86 ~~anllfiD~PvGtGfSy~~~~------~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i 159 (421)
T d1wpxa1 86 SNATVIFLDQPVNVGFSYSGSS------GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEI 159 (421)
T ss_dssp GSSEEEEECCSTTSTTCBCSSC------CCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHH
T ss_pred cccCEEEEecCCCCCceecCCc------cccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHH
Confidence 44689999965 9999965442 3456666777776666443 234899999999999888777432
Q ss_pred ---c---cchhhceEeccCccc
Q 024971 75 ---P---EICRGMILLNISLRM 90 (260)
Q Consensus 75 ---p---~~v~~lvl~~~~~~~ 90 (260)
. -.++|+++.++...+
T Consensus 160 ~~~~~~~inlkGi~iGng~~dp 181 (421)
T d1wpxa1 160 LSHKDRNFNLTSVLIGNGLTDP 181 (421)
T ss_dssp HHCSSCSSCCCEEEEESCCCCH
T ss_pred HHccCCCcceeeeEecCCcccc
Confidence 2 237799998887654
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.47 E-value=7.2e-07 Score=63.00 Aligned_cols=85 Identities=15% Similarity=0.017 Sum_probs=56.5
Q ss_pred CCccEEEEEcCCCCCC-CCCCCCCC-CCCCCCccHHH-HHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccc
Q 024971 4 AKSHRVYSIDLIGYGY-SDKPNPRD-FFDKPFYTFET-WASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEI 77 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G~-S~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 77 (260)
..++.|+.+|-...+. +....+.. ........+++ +++++...+++. +.++..+.|+||||..|+.+|.++|++
T Consensus 59 ~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~ 138 (280)
T d1dqza_ 59 QSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQ 138 (280)
T ss_dssp TSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTT
T ss_pred hCCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCc
Confidence 3578999998532221 11111000 00012334444 456777777664 345789999999999999999999999
Q ss_pred hhhceEeccCc
Q 024971 78 CRGMILLNISL 88 (260)
Q Consensus 78 v~~lvl~~~~~ 88 (260)
+.+++.+++..
T Consensus 139 F~av~s~SG~~ 149 (280)
T d1dqza_ 139 FPYAASLSGFL 149 (280)
T ss_dssp CSEEEEESCCC
T ss_pred eeEEEEecCcc
Confidence 99999999875
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.45 E-value=6e-08 Score=69.28 Aligned_cols=79 Identities=11% Similarity=0.016 Sum_probs=51.6
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh----hc--CCceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKD----VV--KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+++||++||.......-.. .........+.+.++++. .+ .++++|||||+||.+|-.++. +..++
T Consensus 99 ~d~NVI~VDW~~~a~~~Y~~-------a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG~-~~~~l 170 (337)
T d1rp1a2 99 EEVNCICVDWKKGSQTSYTQ-------AANNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGS-RTPGL 170 (337)
T ss_dssp CCEEEEEEECHHHHSSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHH-TSTTC
T ss_pred CCceEEEEeeccccCcchHH-------HHHHHHHHHHHHHHHHHHHHHhcCCChhheEEEeecHHHhhhHHHHH-hhccc
Confidence 45999999997532111000 112334444555555543 33 468999999999999975554 44579
Q ss_pred hhceEeccCcccc
Q 024971 79 RGMILLNISLRML 91 (260)
Q Consensus 79 ~~lvl~~~~~~~~ 91 (260)
.+++.++|+.+..
T Consensus 171 ~rItgLDPA~P~F 183 (337)
T d1rp1a2 171 GRITGLDPVEASF 183 (337)
T ss_dssp CEEEEESCCCTTT
T ss_pred cceeccCCCcccc
Confidence 9999999987543
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.42 E-value=4.8e-08 Score=69.69 Aligned_cols=79 Identities=10% Similarity=0.028 Sum_probs=56.1
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh----c--CCceEEEEeChhhHHHHHHHhhCccch
Q 024971 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV----V--KDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 5 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
.+++||++||.......-.. .........+.+..+++.+ + .++++|||||+||.+|-.++.+.+.++
T Consensus 99 ~d~NVi~VDW~~~a~~~Y~~-------a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~ki 171 (338)
T d1bu8a2 99 EKVNCICVDWRRGSRTEYTQ-------ASYNTRVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHV 171 (338)
T ss_dssp CCEEEEEEECHHHHSSCHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCS
T ss_pred CCceEEEEechhhcccchHH-------HHHhHHHHHHHHHHHHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhcccc
Confidence 46999999997643211100 1224445555555555543 3 468999999999999999998888889
Q ss_pred hhceEeccCccc
Q 024971 79 RGMILLNISLRM 90 (260)
Q Consensus 79 ~~lvl~~~~~~~ 90 (260)
.+++.++|+.+.
T Consensus 172 grItgLDPA~P~ 183 (338)
T d1bu8a2 172 GRITGLDPAEPC 183 (338)
T ss_dssp SEEEEESCBCTT
T ss_pred ccccccccCcCc
Confidence 999999998644
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.39 E-value=1.3e-06 Score=61.17 Aligned_cols=79 Identities=15% Similarity=0.115 Sum_probs=54.9
Q ss_pred CCccEEEEEcCCCCC-CCCCCCCCCCCCCCCccHHH-HHHHHHHHHHhh---cCCceEEEEeChhhHHHHHHHhhCccch
Q 024971 4 AKSHRVYSIDLIGYG-YSDKPNPRDFFDKPFYTFET-WASQLNDFCKDV---VKDQAFFICNSIGGLVGLQAAVMEPEIC 78 (260)
Q Consensus 4 ~~~~~v~~~D~~G~G-~S~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 78 (260)
..++.|+.+|--+.+ .++.+. .....+++ +.+++...+++. ..++..+.|+||||..|+.+|.++|+++
T Consensus 57 ~~~~iVV~p~g~~~~~y~~~~~------~~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F 130 (267)
T d1r88a_ 57 GKGISVVAPAGGAYSMYTNWEQ------DGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRF 130 (267)
T ss_dssp TSSSEEEEECCCTTSTTSBCSS------CTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred hCCeEEEEECCCCCcCCccccc------cccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccc
Confidence 357888988842211 122111 12334544 445677777653 3457899999999999999999999999
Q ss_pred hhceEeccCc
Q 024971 79 RGMILLNISL 88 (260)
Q Consensus 79 ~~lvl~~~~~ 88 (260)
.+++.+++..
T Consensus 131 ~av~~~SG~~ 140 (267)
T d1r88a_ 131 GFAGSMSGFL 140 (267)
T ss_dssp EEEEEESCCC
T ss_pred cEEEEeCCcc
Confidence 9999999864
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.36 E-value=3.5e-06 Score=64.08 Aligned_cols=86 Identities=16% Similarity=0.056 Sum_probs=56.6
Q ss_pred CccEEEEEcCC-CCCCCCCCCCCCCC---CCCCccHHHHHHHHHHHHHhh-------cCCceEEEEeChhhHHHHHHHhh
Q 024971 5 KSHRVYSIDLI-GYGYSDKPNPRDFF---DKPFYTFETWASQLNDFCKDV-------VKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 5 ~~~~v~~~D~~-G~G~S~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
+-.+++-+|.| |.|.|-........ .....+.++.+.++..+++.. ...+++|.|-|+||..+-.+|..
T Consensus 109 ~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~ 188 (483)
T d1ac5a_ 109 SKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANA 188 (483)
T ss_dssp GTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHH
T ss_pred ccCCEEEEeCCCCcCeeecCCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHH
Confidence 44689999986 99999654321100 012346667777777766543 34689999999999988877754
Q ss_pred Cc------------cchhhceEeccCccc
Q 024971 74 EP------------EICRGMILLNISLRM 90 (260)
Q Consensus 74 ~p------------~~v~~lvl~~~~~~~ 90 (260)
.- -.++++++.++...+
T Consensus 189 i~~~n~~~~~~~~~inLkGi~IGNg~~d~ 217 (483)
T d1ac5a_ 189 ILNHNKFSKIDGDTYDLKALLIGNGWIDP 217 (483)
T ss_dssp HHHHHHHCCSTTSCCEEEEEEEEEECCCH
T ss_pred HHHhccccccCCCcccceeeeecCCccCh
Confidence 21 137888887776543
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.30 E-value=1.6e-05 Score=55.60 Aligned_cols=36 Identities=17% Similarity=0.026 Sum_probs=33.4
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchhhceEeccCc
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNISL 88 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 88 (260)
+++.+.|+|+||..++.+|.++|+++.+++.+++..
T Consensus 144 ~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~ 179 (273)
T d1wb4a1 144 MHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 179 (273)
T ss_dssp GGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred cceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccc
Confidence 579999999999999999999999999999999864
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.14 E-value=3.8e-05 Score=54.29 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhh-cC---------CceEEEEeChhhHHHHHHHhh--CccchhhceEeccCc
Q 024971 39 WASQLNDFCKDV-VK---------DQAFFICNSIGGLVGLQAAVM--EPEICRGMILLNISL 88 (260)
Q Consensus 39 ~~~~~~~~~~~~-~~---------~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~ 88 (260)
+++++..++++. .. ++..|.||||||.-|+.+|.+ +|+++.+++.+++..
T Consensus 129 i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~ 190 (299)
T d1pv1a_ 129 IHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIV 190 (299)
T ss_dssp HHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCC
T ss_pred HHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcC
Confidence 445666666553 21 368899999999999999976 488888888888764
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.13 E-value=1.4e-05 Score=55.66 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=27.0
Q ss_pred CceEEEEeChhhHHHHHHHhhCccchhhceEeccC
Q 024971 53 DQAFFICNSIGGLVGLQAAVMEPEICRGMILLNIS 87 (260)
Q Consensus 53 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 87 (260)
++..++|||+||..++.++.+. +.+.+++.++|.
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~~~-~~f~~~~a~s~~ 174 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWLSS-SYFRSYYSASPS 174 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHHHC-SSCSEEEEESGG
T ss_pred CceEEEeccHHHHHHHHHHHcC-cccCEEEEECCc
Confidence 4688999999999999877654 567777777764
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.97 E-value=4.9e-06 Score=60.72 Aligned_cols=58 Identities=9% Similarity=-0.044 Sum_probs=44.0
Q ss_pred CccHHHHHHHHHHHHHhh----c-------------------------CCceEEEEeChhhHHHHHHHhhCcc-------
Q 024971 33 FYTFETWASQLNDFCKDV----V-------------------------KDQAFFICNSIGGLVGLQAAVMEPE------- 76 (260)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~----~-------------------------~~~~~lvGhS~Gg~~a~~~a~~~p~------- 76 (260)
..+.++-++.+...|+.. | .+|++||||||||..+-.++...|+
T Consensus 56 ~~S~~~RA~eL~~~I~~~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~ 135 (388)
T d1ku0a_ 56 LSSNWDRACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEERE 135 (388)
T ss_dssp SBCHHHHHHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHH
T ss_pred ccCHHHHHHHHHHHHhhhhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccc
Confidence 346777788887777643 1 1489999999999999988875443
Q ss_pred ------------------chhhceEeccCccc
Q 024971 77 ------------------ICRGMILLNISLRM 90 (260)
Q Consensus 77 ------------------~v~~lvl~~~~~~~ 90 (260)
.|++++.++++...
T Consensus 136 ~~~~~~~~~~~l~~~~~~~V~SvTTIsTPH~G 167 (388)
T d1ku0a_ 136 YAKEHNVSLSPLFEGGHRFVLSVTTIATPHDG 167 (388)
T ss_dssp HHHHHTCCCCGGGTCCCCCEEEEEEESCCTTC
T ss_pred cccccccccccccccCCcceEEEEeccCCCCC
Confidence 58899999987544
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=97.20 E-value=0.00028 Score=48.78 Aligned_cols=26 Identities=23% Similarity=0.185 Sum_probs=20.7
Q ss_pred HhhcCCceEEEEeChhhHHHHHHHhh
Q 024971 48 KDVVKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 48 ~~~~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
+.....++++.|||+||.+|..+|..
T Consensus 127 ~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 127 KQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HhCCCceEEEecccchHHHHHHHHHH
Confidence 33345689999999999999988754
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=97.19 E-value=0.00029 Score=48.65 Aligned_cols=23 Identities=22% Similarity=0.244 Sum_probs=19.5
Q ss_pred cCCceEEEEeChhhHHHHHHHhh
Q 024971 51 VKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 51 ~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
...++++.|||+||.+|..+|..
T Consensus 131 ~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 131 PTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHH
T ss_pred CCceEEEEecccchHHHHHHHHH
Confidence 44589999999999999988864
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=97.14 E-value=0.00035 Score=48.08 Aligned_cols=23 Identities=13% Similarity=0.037 Sum_probs=19.4
Q ss_pred cCCceEEEEeChhhHHHHHHHhh
Q 024971 51 VKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 51 ~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
...++++.|||+||.+|..++..
T Consensus 123 ~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 123 PDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHH
T ss_pred CCcceEEeccchhHHHHHHHHHH
Confidence 44589999999999999988754
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=97.13 E-value=0.00027 Score=48.98 Aligned_cols=37 Identities=19% Similarity=0.141 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhh----cCCceEEEEeChhhHHHHHHHhh
Q 024971 37 ETWASQLNDFCKDV----VKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 37 ~~~~~~~~~~~~~~----~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
..+..++.+.++.+ ...++++.|||+||.+|..++..
T Consensus 117 ~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 117 KLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 33334444444433 34579999999999999988765
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=97.08 E-value=0.00044 Score=47.85 Aligned_cols=23 Identities=22% Similarity=0.287 Sum_probs=19.6
Q ss_pred cCCceEEEEeChhhHHHHHHHhh
Q 024971 51 VKDQAFFICNSIGGLVGLQAAVM 73 (260)
Q Consensus 51 ~~~~~~lvGhS~Gg~~a~~~a~~ 73 (260)
...++++.|||+||.+|..++..
T Consensus 136 ~~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 136 PDYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHH
T ss_pred CCcceeeeccchHHHHHHHHHHH
Confidence 34589999999999999988864
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=96.38 E-value=0.004 Score=40.56 Aligned_cols=52 Identities=8% Similarity=0.004 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhCc----cchhhceEeccC
Q 024971 36 FETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVMEP----EICRGMILLNIS 87 (260)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~ 87 (260)
...+...+.+..++....+++|+|+|.|+.++-.++...+ ++|.++++++-+
T Consensus 79 ~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 79 IREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 3445555666666666679999999999999998887653 468888888754
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=95.33 E-value=0.013 Score=38.48 Aligned_cols=49 Identities=16% Similarity=0.143 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhcCCceEEEEeChhhHHHHHHHhhC------------------ccchhhceEeccC
Q 024971 39 WASQLNDFCKDVVKDQAFFICNSIGGLVGLQAAVME------------------PEICRGMILLNIS 87 (260)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~------------------p~~v~~lvl~~~~ 87 (260)
+.+.+.+..++....+++|+|+|.|+.++-.++... .++|.++++++-+
T Consensus 68 ~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~GdP 134 (207)
T d1qoza_ 68 AAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccCCCCCChhhhhcEEEEEEEeCC
Confidence 333344444444556999999999999998876421 1357777777643
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=94.86 E-value=0.023 Score=37.25 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=22.5
Q ss_pred HHHHHHHhhcCCceEEEEeChhhHHHHHHHh
Q 024971 42 QLNDFCKDVVKDQAFFICNSIGGLVGLQAAV 72 (260)
Q Consensus 42 ~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~ 72 (260)
.+.+..++....+++|+|+|.|+.++-.++.
T Consensus 71 ~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 71 AVNSFNSQCPSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp HHHHHHHHSTTCEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcEEEEeeccccHHHHHHHh
Confidence 3333334445568999999999999988764
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=93.56 E-value=0.055 Score=40.58 Aligned_cols=80 Identities=11% Similarity=0.012 Sum_probs=50.1
Q ss_pred ccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHH---HHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhC--
Q 024971 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVME-- 74 (260)
Q Consensus 6 ~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~-- 74 (260)
+.-|+++++| |+=....... .....+.+.|+.. .|.+-|..+|. ++|.|+|||.||..+...+...
T Consensus 127 ~vVvV~~nYRlg~~GFl~~~~~~~---~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~ 203 (483)
T d1qe3a_ 127 EVIVVTLNYRLGPFGFLHLSSFDE---AYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAA 203 (483)
T ss_dssp TCEEEEECCCCHHHHSCCCTTTCT---TSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGG
T ss_pred ceEEEeecccccchhhcccccccc---ccccccccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhccccc
Confidence 4667888877 3321111000 0014566666664 44566666665 4799999999999888776432
Q ss_pred ccchhhceEeccCc
Q 024971 75 PEICRGMILLNISL 88 (260)
Q Consensus 75 p~~v~~lvl~~~~~ 88 (260)
...++++|+.++..
T Consensus 204 ~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 204 KGLFQKAIMESGAS 217 (483)
T ss_dssp TTSCSEEEEESCCC
T ss_pred CCcceeeccccCCc
Confidence 24689999998764
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.39 E-value=0.15 Score=38.70 Aligned_cols=79 Identities=10% Similarity=-0.005 Sum_probs=49.5
Q ss_pred ccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHH---HHHHHHHhhcC--CceEEEEeChhhHHHHHHHhh--C
Q 024971 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVM--E 74 (260)
Q Consensus 6 ~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~--~ 74 (260)
+.-|+++++| |+-.+..... ...+.+.|+.. .|.+-|..+|. ++|.|+|||.||..+...+.. .
T Consensus 142 ~vIvVt~nYRLg~~GFl~~~~~~~-----~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~ 216 (532)
T d2h7ca1 142 NVVVVTIQYRLGIWGFFSTGDEHS-----RGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLA 216 (532)
T ss_dssp TCEEEEECCCCHHHHHCCCSSTTC-----CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGG
T ss_pred ceEEEEEeeccCCCcccccccccc-----ccccccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhc
Confidence 4567777777 3322211110 23566666664 44566666665 479999999999887776543 2
Q ss_pred ccchhhceEeccCcc
Q 024971 75 PEICRGMILLNISLR 89 (260)
Q Consensus 75 p~~v~~lvl~~~~~~ 89 (260)
...++++|+.++...
T Consensus 217 ~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 217 KNLFHRAISESGVAL 231 (532)
T ss_dssp TTSCSEEEEESCCTT
T ss_pred cCcchhhhhhccccc
Confidence 236888999887643
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.98 E-value=0.18 Score=38.72 Aligned_cols=78 Identities=13% Similarity=0.025 Sum_probs=49.4
Q ss_pred ccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHHH---HHHHHHhhcC--CceEEEEeChhhHHHHHHHhh--C
Q 024971 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWASQ---LNDFCKDVVK--DQAFFICNSIGGLVGLQAAVM--E 74 (260)
Q Consensus 6 ~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~--~ 74 (260)
+.-|+.+++| |+-.+..... ...+.+.|+... |.+-|..+|. ++|.|+|||.||..+...+.. .
T Consensus 135 ~vIvVt~nYRlg~~GFl~~~~~~~-----~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~ 209 (579)
T d2bcea_ 135 NVIVVTFNYRVGPLGFLSTGDSNL-----PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYN 209 (579)
T ss_dssp TCEEEEECCCCHHHHHCCCSSTTC-----CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGG
T ss_pred CEEEEeecccccccccccccccCC-----CccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcc
Confidence 3567778877 3321111110 245667776654 4566666665 479999999999888765543 2
Q ss_pred ccchhhceEeccCc
Q 024971 75 PEICRGMILLNISL 88 (260)
Q Consensus 75 p~~v~~lvl~~~~~ 88 (260)
...++++|+.++..
T Consensus 210 ~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 210 KGLIKRAISQSGVG 223 (579)
T ss_dssp TTTCSEEEEESCCT
T ss_pred cCccccceeccCCc
Confidence 34689999998754
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=91.97 E-value=0.26 Score=37.46 Aligned_cols=82 Identities=12% Similarity=0.079 Sum_probs=48.6
Q ss_pred CccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHH---HHHHHHHhhcC--CceEEEEeChhhHHHHHHHhh--
Q 024971 5 KSHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVM-- 73 (260)
Q Consensus 5 ~~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~-- 73 (260)
.+.-|+++++| |+-.+...... ....+.+.|+.. .|.+-|.++|. ++|.|+|||.||..+...+..
T Consensus 155 ~~vIvVt~nYRlg~~Gfl~~~~~~~~---~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~ 231 (544)
T d1thga_ 155 QPVVFVSINYRTGPFGFLGGDAITAE---GNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYG 231 (544)
T ss_dssp CCCEEEEECCCCHHHHHCCSHHHHHH---TCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGG
T ss_pred CCeEEEecccccccccccCCchhhcc---ccccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcC
Confidence 45677777777 33222110000 013455555554 44555666654 479999999999866655432
Q ss_pred ------CccchhhceEeccCcc
Q 024971 74 ------EPEICRGMILLNISLR 89 (260)
Q Consensus 74 ------~p~~v~~lvl~~~~~~ 89 (260)
....++++|+.++...
T Consensus 232 ~~~~~~s~gLF~raI~qSG~~~ 253 (544)
T d1thga_ 232 GDNTYNGKKLFHSAILQSGGPL 253 (544)
T ss_dssp TCCEETTEESCSEEEEESCCCC
T ss_pred CCcccchhhhhccccccccccc
Confidence 1247899999997643
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.61 E-value=0.18 Score=38.27 Aligned_cols=80 Identities=8% Similarity=-0.059 Sum_probs=51.1
Q ss_pred CccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHH---HHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhCc
Q 024971 5 KSHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVMEP 75 (260)
Q Consensus 5 ~~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p 75 (260)
++.-|+++++| |+-.+..... ....+.+.|+.. .|.+-|..+|. ++|.|+|||.||..+...+....
T Consensus 142 ~~vvvVt~nYRlg~~Gfl~~~~~~~----~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~ 217 (542)
T d2ha2a1 142 EGAVLVSMNYRVGTFGFLALPGSRE----APGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLP 217 (542)
T ss_dssp HCCEEEEECCCCHHHHHCCCTTCSS----CCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHH
T ss_pred ccceeEeeeeeccceeeeccccccc----CCCcCCcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhh
Confidence 35678888888 5432221110 023455666654 44566666765 47999999999998887665322
Q ss_pred --cchhhceEeccCc
Q 024971 76 --EICRGMILLNISL 88 (260)
Q Consensus 76 --~~v~~lvl~~~~~ 88 (260)
..+.++|+.++..
T Consensus 218 ~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 218 SRSLFHRAVLQSGTP 232 (542)
T ss_dssp HHTTCSEEEEESCCS
T ss_pred hhHHhhhheeecccc
Confidence 3688889888754
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=90.79 E-value=0.17 Score=38.37 Aligned_cols=79 Identities=11% Similarity=0.041 Sum_probs=47.9
Q ss_pred CCccEEEEEcCC----CCCCCC---CCCCCCCCCCCCccHHHHHH---HHHHHHHhhcC--CceEEEEeChhhHHHH-HH
Q 024971 4 AKSHRVYSIDLI----GYGYSD---KPNPRDFFDKPFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGL-QA 70 (260)
Q Consensus 4 ~~~~~v~~~D~~----G~G~S~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~lvGhS~Gg~~a~-~~ 70 (260)
.++.-|+++++| |+-... ... ...+.+.|+.. .|.+-|..+|. ++|.|+|||.||..+. ++
T Consensus 146 ~~~vIvVt~nYRLg~~GFl~~~~~~~~~------~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l 219 (534)
T d1llfa_ 146 GKPIIHVAVNYRVASWGFLAGDDIKAEG------SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHL 219 (534)
T ss_dssp TCCCEEEEECCCCHHHHHCCSHHHHHHT------CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHH
T ss_pred cCCeEEEEeecCCCcccccCCccccccc------ccccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHH
Confidence 356778888888 322211 000 12355555554 45566666664 4799999999998665 44
Q ss_pred HhhC----c---cchhhceEeccCc
Q 024971 71 AVME----P---EICRGMILLNISL 88 (260)
Q Consensus 71 a~~~----p---~~v~~lvl~~~~~ 88 (260)
.... | ..++++|+.++..
T Consensus 220 ~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 220 IWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HGGGGCCEETTEESCSEEEEESCCS
T ss_pred hccccccccchhhhhhhhhhccCcc
Confidence 3221 1 3488999998753
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=90.25 E-value=0.22 Score=37.63 Aligned_cols=56 Identities=9% Similarity=-0.053 Sum_probs=38.1
Q ss_pred CccHHHHHH---HHHHHHHhhcC--CceEEEEeChhhHHHHHHHhh----CccchhhceEeccCc
Q 024971 33 FYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVM----EPEICRGMILLNISL 88 (260)
Q Consensus 33 ~~~~~~~~~---~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~----~p~~v~~lvl~~~~~ 88 (260)
.+.+.|+.. .|.+-|..+|. ++|.|+|||.||..+...... ....++++|+.++..
T Consensus 156 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 156 NAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred chhHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 455666554 44556666665 479999999999877654432 223689999998754
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.17 E-value=0.34 Score=36.54 Aligned_cols=79 Identities=10% Similarity=-0.069 Sum_probs=48.3
Q ss_pred ccEEEEEcCC----CCCCCCCCCCCCCCCCCCccHHHHHH---HHHHHHHhhcC--CceEEEEeChhhHHHHHHHhh--C
Q 024971 6 SHRVYSIDLI----GYGYSDKPNPRDFFDKPFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVM--E 74 (260)
Q Consensus 6 ~~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~--~ 74 (260)
+.-|+.+++| |+-.+..... ....+.+.|+.. .|.+-|+.+|. ++|.|+|+|.||..+...... .
T Consensus 135 ~vVvVt~nYRlg~~Gfl~~~~~~~----~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~ 210 (526)
T d1p0ia_ 135 RVIVVSMNYRVGALGFLALPGNPE----APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGS 210 (526)
T ss_dssp CCEEEEECCCCHHHHHCCCTTCTT----SCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGG
T ss_pred ceeEEecccccccccccCCCCccc----ccccccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcc
Confidence 5667778877 2222111100 024556666665 44566666665 479999999999988655432 2
Q ss_pred ccchhhceEeccCc
Q 024971 75 PEICRGMILLNISL 88 (260)
Q Consensus 75 p~~v~~lvl~~~~~ 88 (260)
...++++|+.++..
T Consensus 211 ~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 211 HSLFTRAILQSGSF 224 (526)
T ss_dssp GGGCSEEEEESCCT
T ss_pred hhhhhhhhcccccc
Confidence 34588888888764
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=87.73 E-value=0.26 Score=37.34 Aligned_cols=57 Identities=14% Similarity=-0.045 Sum_probs=39.5
Q ss_pred CCccHHHHHH---HHHHHHHhhcC--CceEEEEeChhhHHHHHHHhhC--ccchhhceEeccCc
Q 024971 32 PFYTFETWAS---QLNDFCKDVVK--DQAFFICNSIGGLVGLQAAVME--PEICRGMILLNISL 88 (260)
Q Consensus 32 ~~~~~~~~~~---~~~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 88 (260)
..+.+.|+.. .|.+-|..+|. ++|.|+|||.||..+...+... ...++++|+.++..
T Consensus 163 gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 163 GNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred CcccchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 3456666664 44566666665 4799999999998877665432 24588999888764
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=83.91 E-value=0.53 Score=35.91 Aligned_cols=57 Identities=7% Similarity=-0.057 Sum_probs=38.1
Q ss_pred CCccHHHHHHHH---HHHHHhhcC--CceEEEEeChhhHHHHHHHhhC--ccchhhceEeccCc
Q 024971 32 PFYTFETWASQL---NDFCKDVVK--DQAFFICNSIGGLVGLQAAVME--PEICRGMILLNISL 88 (260)
Q Consensus 32 ~~~~~~~~~~~~---~~~~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 88 (260)
..+.+.|+...+ .+-|..+|. ++|.|+|||.||..+...+... ...++++|+.++..
T Consensus 202 gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 202 GNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp SCHHHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred CcccchHHHHHHHHHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccc
Confidence 355666666543 445555654 4799999999999887655432 24578888887654
|
| >d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FabD/lysophospholipase-like superfamily: FabD/lysophospholipase-like family: FabD-like domain: Catalytic domain of malonyl-CoA ACP transacylase FabD species: Escherichia coli [TaxId: 562]
Probab=82.13 E-value=0.56 Score=31.12 Aligned_cols=29 Identities=21% Similarity=0.150 Sum_probs=21.5
Q ss_pred HHHh-hcCCceEEEEeChhhHHHHHHHhhC
Q 024971 46 FCKD-VVKDQAFFICNSIGGLVGLQAAVME 74 (260)
Q Consensus 46 ~~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~ 74 (260)
+++. .+..+-.++|||+|=..|+.+|...
T Consensus 74 ~l~~~~g~~p~~v~GhSlGE~aAl~~aG~l 103 (235)
T d1mlaa1 74 VWQQQGGKAPAMMAGHSLGEYSALVCAGVI 103 (235)
T ss_dssp HHHHTTCCCCSEEEESTHHHHHHHHHTTSS
T ss_pred HHHHhcCCCceeeeeccchHHHHHHHcCCc
Confidence 3444 3677888999999999888776543
|