Citrus Sinensis ID: 024976

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD
Secondary Structure (PSIPRED)
cccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHccHHHcccHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccHHHccccEEEEEccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccEcHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccEEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcccEcccHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHccHccccccEEEEcc
Coil and Loop (DISEMBL)
mespfkgdiLKGKVALLtgggsgigFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLgipaiglegdvrkrEDAVRVVESTINHFGKLDILVNAAagnflvpaedlspngfrtVIEIDSVGTFIMCHEALKYLKkggrgqassssggiIINISATLHYTATWYQIHVSAAKAAVDSITRSLALewgtdyairvngiapgpikdtagvsklapeEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD
Flexible Loop (DISEMBL)
mespfkgdILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHslgipaiglegdvrkREDAVRVVESTINHFGKLDILVNAAAGNFLVpaedlspngFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAirvngiapgpikdtagvsklapeEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD
Low Complexity Region (SEG)
MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKggrgqassssggiiinisATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIamaalylasdaaVHRDLIHLLDD
Disordered region (IsUnstruct)
*******DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG*********GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLL**
Disordered Region (DISOPRED)
**SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR***SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD
Disordered Region (DISEMBL)
MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL**********SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD
Disordered Region (DISPRO)
****FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	259	2.2.26 [Sep-21-2011]
Q9LTV6	298	Peroxisomal 2,4-dienoyl-C	yes	no	0.953	0.828	0.777	7e-97
Q5RBV3	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.915	0.811	0.411	2e-40
Q9NUI1	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.915	0.811	0.407	4e-40
Q6NV34	300	Peroxisomal 2,4-dienoyl-C	yes	no	0.911	0.786	0.409	1e-39
Q9WV68	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.949	0.842	0.420	9e-38
Q9Z2M4	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.945	0.839	0.406	6e-36
O34717	254	Probable 2,4-dienoyl-CoA	yes	no	0.926	0.944	0.352	2e-34
P32573	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.918	0.815	0.366	1e-33
Q9WYG0	251	Uncharacterized oxidoredu	yes	no	0.868	0.896	0.333	7e-27
Q9WVK3	303	Peroxisomal trans-2-enoyl	no	no	0.903	0.772	0.315	8e-26

>sp|Q9LTV6|DECR2_ARATH Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1

 Score =  353 bits (906), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 192/247 (77%), Positives = 214/247 (86%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M+SPFK D+++G+VAL+TGGGSGIGFEIS Q GKHGA+IAIMGRRK VL  AV+AL SLG
Sbjct: 1   MDSPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           I AIGLEGDVRK+EDA RVVE+T  HFGKLDILVNAAAGNFL  AEDLSPNGFRTV++ID
Sbjct: 61  IQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           +VGTF MCH ALKYLKKG  G+ SSS GG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 AVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           R+LALEWGTDY IRVNGIAPGPI  T G+SKL PEEI +K  +YM  YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKVGEKWDIAMAA 240

Query: 241 LYLASDA 247
           LYL+ D+
Sbjct: 241 LYLSCDS 247

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 4

>sp|Q5RBV3|DECR2_PONAB Peroxisomal 2,4-dienoyl-CoA reductase OS=Pongo abelii GN=DECR2 PE=2 SV=1

 Score =  165 bits (418), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/248 (41%), Positives = 138/248 (55%), Gaps = 11/248 (4%)

Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
           F  D+L+ KVA +TGGGSGIGF I+    +HG    I  R    VL +A     + G   
Sbjct: 21  FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
           + L  DVR     V  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ G
Sbjct: 81  LPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
           TF +     +   +          GG+I+NI+ATL       Q+H  +AKAAVD++TR L
Sbjct: 141 TFNVSRVLYEKFFR--------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALY 242
           A+EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251

Query: 243 LASDAAVH 250
           LAS  A +
Sbjct: 252 LASPLASY 259

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9NUI1|DECR2_HUMAN Peroxisomal 2,4-dienoyl-CoA reductase OS=Homo sapiens GN=DECR2 PE=1 SV=1

 Score =  165 bits (417), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 138/248 (55%), Gaps = 11/248 (4%)

Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
           F  D+L+ KVA +TGGGSGIGF I+    +HG    I  R    VL +A     + G   
Sbjct: 21  FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
           + L  DVR     +  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ G
Sbjct: 81  LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
           TF +     +   +          GG+I+NI+ATL       Q+H  +AKAAVD++TR L
Sbjct: 141 TFNVSRVLYEKFFR--------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALY 242
           A+EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251

Query: 243 LASDAAVH 250
           LAS  A +
Sbjct: 252 LASPLASY 259

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q6NV34|DECR2_DANRE Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rerio GN=decr2 PE=2 SV=1

 Score =  163 bits (413), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 140/249 (56%), Gaps = 13/249 (5%)

Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPA 63
           +  D+L  +VA +TGGGSGIGF I+  L +HG    I  R    +  A   L S  G   
Sbjct: 28  YSPDLLSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNLEKISQAAKKLTSTTGRRC 87

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
           + +  DVR+ E  +  V+ T+  FG++DIL+N AAGNFL PA  LS N F+TV+EID++G
Sbjct: 88  LPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMG 147

Query: 124 TFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
           TF        K+ K           GG I+NISATL Y     Q+H  +AKAA D++TR 
Sbjct: 148 TFNTSKVIYDKWFK---------DHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRH 198

Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK-ATDYMAAYKFGEKWDIAMAAL 241
           LA+EWG    +RVN +APGPI  T G  +L      +  A   +   + G K ++A A L
Sbjct: 199 LAVEWGPS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVL 257

Query: 242 YLASDAAVH 250
           +LAS A+ +
Sbjct: 258 FLASRASSY 266

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9WV68|DECR2_MOUSE Peroxisomal 2,4-dienoyl-CoA reductase OS=Mus musculus GN=Decr2 PE=1 SV=1

 Score =  157 bits (396), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/257 (42%), Positives = 150/257 (58%), Gaps = 11/257 (4%)

Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
           F  D+L+ KVA +TGGGSGIGF I+    +HG    I+GR  + V  +A   + + G   
Sbjct: 21  FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVGRSLQKVTTAAKKLVAATGKRC 80

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
           + L  DVR   + +  V+  +  FGK++IL+N AAGNFL PA  LS N F+TV++ID++G
Sbjct: 81  LPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTIG 140

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
           TF +   ++ Y KK  R       GG+I+NI+ATL       Q+H  AAKAAVD++TR L
Sbjct: 141 TFNV--SSVLY-KKFFRDH-----GGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALY 242
           A+EWG    IRVN +APG I  T G+ +L      SK   +     + G K +IA + LY
Sbjct: 193 AVEWGPQ-NIRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSNPIPRLGTKTEIAHSVLY 251

Query: 243 LASDAAVHRDLIHLLDD 259
           LAS  A +   I L+ D
Sbjct: 252 LASPLASYVSGIVLVVD 268

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9Z2M4|DECR2_RAT Peroxisomal 2,4-dienoyl-CoA reductase OS=Rattus norvegicus GN=Decr2 PE=2 SV=1

 Score =  151 bits (381), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/258 (40%), Positives = 147/258 (56%), Gaps = 13/258 (5%)

Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
           F  D+L+ KVA +TGGGSGIGF I+    +HG    I+ R    V  +A   + + G   
Sbjct: 21  FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVSRSLPRVSEAAKKLVAATGKRC 80

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
           + L  DVR     +  V+  +  FGK+DIL+N AAGNFL PA  LS N F+TV++ID++G
Sbjct: 81  LPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLG 140

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
           TF +     +   +          GG+I+NI+ATL       Q+H  AAKAAVD++TR L
Sbjct: 141 TFNVSRVLYEKFFR--------DHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--YKFGEKWDIAMAAL 241
           A+EWG    IRVN +APG I  T G+ +L   +  SK   Y+++   + G K +IA + L
Sbjct: 193 AVEWGPQ-NIRVNSLAPGAISGTEGLRRLGGPKASSK-FKYLSSPIPRLGTKTEIAHSVL 250

Query: 242 YLASDAAVHRDLIHLLDD 259
           YLAS  A +   I L+ D
Sbjct: 251 YLASPLASYVSGIVLVVD 268

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|O34717|FADH_BACSU Probable 2,4-dienoyl-CoA reductase OS=Bacillus subtilis (strain 168) GN=fadH PE=2 SV=1

 Score =  145 bits (367), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 136/250 (54%), Gaps = 10/250 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           ++ K  ++TGG SG+G  ++ +  + G  + + GR    L      + +        + D
Sbjct: 1   MEKKAVIITGGSSGMGKAMAKKQAELGWHVMVTGRNHEALEETKKEIQTFEGQVACFQMD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           VR    A  +++  +  FG+LD L+N AAGNF+ PAE L+PNG++ VIEI   GTF  C 
Sbjct: 61  VRSDSAASDMIKEAVKAFGRLDALINNAAGNFICPAEKLTPNGWKAVIEIVLNGTFF-CS 119

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           +A        R        G+I+N++AT  + A    +H +AAKA V S+TR+LA+EWG+
Sbjct: 120 QA------AARHWIDQKQQGVILNMAATYAWGAGAGVVHSAAAKAGVLSLTRTLAVEWGS 173

Query: 190 DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            Y IR N IAPGPI+ T G  KL   E+  ++  + +   + G   +IA  A +L SD A
Sbjct: 174 KYGIRTNAIAPGPIERTGGAEKLFESEKAMARTMNSVPLGRLGTPEEIAALAAFLLSDEA 233

Query: 249 --VHRDLIHL 256
             ++ D I +
Sbjct: 234 SYINGDCITM 243

Auxiliary enzyme of beta-oxidation. It participates in the metabolism of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|P32573|SPS19_YEAST Peroxisomal 2,4-dienoyl-CoA reductase SPS19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPS19 PE=1 SV=4

 Score =  143 bits (360), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 136/254 (53%), Gaps = 16/254 (6%)

Query: 2   ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG- 60
           E  ++ D+ KGKVA +TGG   I    +  L   G   AI+GR +     A   +  L  
Sbjct: 14  EGSWRPDLFKGKVAFVTGGAGTICRVQTEALVLLGCKAAIVGRDQERTEQAAKGISQLAK 73

Query: 61  ----IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
               + AI    DVR  E     V+ T+  FGK+D ++  AAGNF+    +LSPN F++V
Sbjct: 74  DKDAVLAIA-NVDVRNFEQVENAVKKTVEKFGKIDFVIAGAAGNFVCDFANLSPNAFKSV 132

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
           ++ID +G+F      LK LKK         S G I+ +SAT HY    +Q HV AAKA +
Sbjct: 133 VDIDLLGSFNTAKACLKELKK---------SKGSILFVSATFHYYGVPFQGHVGAAKAGI 183

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           D++ ++LA+E G    IR N IAPG I +T G+ +LA ++ + KA   +   + G   DI
Sbjct: 184 DALAKNLAVELGP-LGIRSNCIAPGAIDNTEGLKRLAGKKYKEKALAKIPLQRLGSTRDI 242

Query: 237 AMAALYLASDAAVH 250
           A + +Y+ S AA +
Sbjct: 243 AESTVYIFSPAASY 256

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Dispensable for growth and sporulation on solid acetate and oleate media, but is essential for these processes to occur on petroselineate.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9WYG0|Y325_THEMA Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_0325 PE=3 SV=1

 Score =  120 bits (302), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 133/246 (54%), Gaps = 21/246 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            +GKV L+TG GSGIG + ++   + GA +AI    +   +  V  + S+G  A  + GD
Sbjct: 3   FQGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP---AEDLSPNGFRTVIEIDSVGTFI 126
           V K  DA ++V+ T+  FG+LDILVN A    +VP    E+ S   F   + ++  G F+
Sbjct: 63  VAK--DAEQIVKKTVETFGRLDILVNNAG---IVPYGNIEETSEEDFDKTMAVNVKGPFL 117

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +   A++ +KK G        GG+I+N+S+         +   S +KAA+  +TRSLA++
Sbjct: 118 LSKYAVEQMKKQG--------GGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVD 169

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALY 242
           +  DY IRVN + PG  +    ++++     PEE+  K T  +   + G++ +IA A L+
Sbjct: 170 Y-VDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIPMKRLGKEEEIAFAILF 228

Query: 243 LASDAA 248
            A D A
Sbjct: 229 AACDEA 234

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9WVK3|PECR_RAT Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1

 Score =  117 bits (293), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 23/257 (8%)

Query: 2   ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI 61
           +S     +L+ +VA++TGG +GIG  IS +L   G  + I  R+   L +AV  L +   
Sbjct: 8   QSYLAAGLLQNQVAVVTGGATGIGKAISRELLHLGCNVVIASRKLDRLTAAVDELRASQP 67

Query: 62  PA-----IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
           P+       ++ ++RK E+   +V+ST+  +GK++ LVN A G F+ PAED++  G++ V
Sbjct: 68  PSSSTQVTAIQCNIRKEEEVNNLVKSTLAKYGKINFLVNNAGGQFMAPAEDITAKGWQAV 127

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY---TATWYQIHVSAAK 173
           IE +  GTF MC        K          GG I+NI   L+    TA     H  AA+
Sbjct: 128 IETNLTGTFYMCKAVYNSWMK--------DHGGSIVNIIVLLNNGFPTAA----HSGAAR 175

Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFG 231
           A V ++T+++AL W +   +R+N +APG I     V       + +   A + + A + G
Sbjct: 176 AGVYNLTKTMALTWASS-GVRINCVAPGTIYSQTAVDNYGELGQTMFEMAFENIPAKRVG 234

Query: 232 EKWDIAMAALYLASDAA 248
              +I+    +L S AA
Sbjct: 235 LPEEISPLVCFLLSPAA 251

Participates in chain elongation of fatty acids. Has no 2,4-dienoyl-CoA reductase activity.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	259
255565323	298	2,4-dienoyl-CoA reductase, putative [Ric	0.965	0.838	0.824	1e-116
225423652	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.949	0.828	0.834	1e-115
224120278	299	predicted protein [Populus trichocarpa]	1.0	0.866	0.787	1e-112
225462240	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.996	0.868	0.783	1e-110
388502636	297	unknown [Lotus japonicus]	0.949	0.828	0.789	1e-108
388519645	275	unknown [Lotus japonicus]	0.949	0.894	0.789	1e-108
358249176	298	uncharacterized protein LOC100800885 [Gl	0.953	0.828	0.805	1e-107
358248016	298	uncharacterized protein LOC100793630 [Gl	0.953	0.828	0.801	1e-105
449444144	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.949	0.828	0.777	1e-105
297834090	298	short-chain dehydrogenase/reductase fami	0.953	0.828	0.773	1e-101

>gi|255565323|ref|XP_002523653.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] gi|223537105|gb|EEF38739.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/250 (82%), Positives = 228/250 (91%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           MESPFKGDILKGKVAL+TGGGSGIG+EISLQLGKHGA+IAIMGRRK VL SAVA+LHSLG
Sbjct: 1   MESPFKGDILKGKVALITGGGSGIGYEISLQLGKHGASIAIMGRRKNVLLSAVASLHSLG 60

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           IPAIGLEGDVRK++DAV+++EST+ HFG+LDILVNAAAGNFLV +EDLSPNGFRTVI+ID
Sbjct: 61  IPAIGLEGDVRKKDDAVKILESTVRHFGRLDILVNAAAGNFLVASEDLSPNGFRTVIDID 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           SVGTF MCHEA KYLKKGG+G+  S+ GGIIINISATLHYTATWYQIHVSAAKAAVDSIT
Sbjct: 121 SVGTFTMCHEAFKYLKKGGQGKDPSTGGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           RSLALEWGT+Y I+VNGIAPGPI DTAG+SKLAPEEI  +A + +   K GEKWDIAMAA
Sbjct: 181 RSLALEWGTEYDIKVNGIAPGPIGDTAGLSKLAPEEILREAKEKLPLDKLGEKWDIAMAA 240

Query: 241 LYLASDAAVH 250
           LYL SDA  H
Sbjct: 241 LYLTSDAGKH 250

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423652|ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|147772171|emb|CAN73418.1| hypothetical protein VITISV_019955 [Vitis vinifera] gi|297737992|emb|CBI27193.3| unnamed protein product [Vitis vinifera]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/247 (83%), Positives = 229/247 (92%), Gaps = 1/247 (0%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           MESPF+GDILKGKVALLTGGGSGIG+EIS QLGKHGA+IAIMGRR+ VL +AV++LHSLG
Sbjct: 1   MESPFRGDILKGKVALLTGGGSGIGYEISRQLGKHGASIAIMGRRRQVLDAAVSSLHSLG 60

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           IPAIGLEGDVRK+EDAVRV+ESTI HFG+LDILVNAAAGNFLVPAEDLSP GF+TVI+ID
Sbjct: 61  IPAIGLEGDVRKQEDAVRVLESTIKHFGRLDILVNAAAGNFLVPAEDLSPKGFQTVIDID 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           SVGTF MCHEAL+YLKKGG G+ S S+GGIIINISATLHYTATWYQIHVSAAKAAVDSIT
Sbjct: 121 SVGTFTMCHEALQYLKKGGPGK-SPSTGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 179

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           RSLALEWGTDY IRVNGIAPGPI DTAG+SKLAPE++  KA ++   +K GEKWDIAMAA
Sbjct: 180 RSLALEWGTDYDIRVNGIAPGPIDDTAGLSKLAPEDVVRKAKEHEPLFKLGEKWDIAMAA 239

Query: 241 LYLASDA 247
           +YLAS+A
Sbjct: 240 VYLASNA 246

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120278|ref|XP_002318290.1| predicted protein [Populus trichocarpa] gi|222858963|gb|EEE96510.1| predicted protein [Populus trichocarpa]

 Score =  408 bits (1049), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/259 (78%), Positives = 229/259 (88%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           +ESPFK +IL+GKVALLTGGGSGIG+EISLQLGKHGA+IAIMGRRK V+ SAV++L+SLG
Sbjct: 2   VESPFKPEILRGKVALLTGGGSGIGYEISLQLGKHGASIAIMGRRKHVVDSAVSSLNSLG 61

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           IPAIG EGDVRKREDA+RVVEST  HFG+LDILVNAAAGNFLVP+EDLS NGFRTV++ID
Sbjct: 62  IPAIGFEGDVRKREDAIRVVESTFKHFGRLDILVNAAAGNFLVPSEDLSSNGFRTVMDID 121

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           SVGTF MCHEALKYLKKGG G+  S++GG IINISATLHYTATWYQIHVSAAKAAVDSIT
Sbjct: 122 SVGTFTMCHEALKYLKKGGLGKDPSTAGGTIINISATLHYTATWYQIHVSAAKAAVDSIT 181

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           R+LALEWGTDY IRVNGIAPGPI DTAG+SKL  E I SKA + M  +K GEKWDIAMAA
Sbjct: 182 RNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLGLEGILSKAMEKMPLFKVGEKWDIAMAA 241

Query: 241 LYLASDAAVHRDLIHLLDD 259
           +YLASDA  + +   L+ D
Sbjct: 242 VYLASDAGKYVNGTTLVVD 260

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462240|ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|297736138|emb|CBI24176.3| unnamed protein product [Vitis vinifera]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/259 (78%), Positives = 223/259 (86%), Gaps = 1/259 (0%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           MESPFK D+LKGKVALLTGGGSGIGFEIS Q G HGA+IAIMGRRK VL SAV+ L S G
Sbjct: 1   MESPFKADVLKGKVALLTGGGSGIGFEISTQFGLHGASIAIMGRRKQVLDSAVSGLCSQG 60

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           IPA+G  GDVRK+EDA RVVEST+ HFG+LDILVNAAAGNFLV +EDLSPNGFRTV++ID
Sbjct: 61  IPAVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNFLVSSEDLSPNGFRTVMDID 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           SVGTF MCHEALKYLKKGG G+ S SSGG I+NISATLHYTA WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCHEALKYLKKGGPGR-SFSSGGSILNISATLHYTAAWYQIHVSAAKAAVDATT 179

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           R+LALEWGTDY IRVNGIAPGPI DTAG+SKLAPEEI +KA + M  YK GEKWDIAMAA
Sbjct: 180 RNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKAREIMPLYKLGEKWDIAMAA 239

Query: 241 LYLASDAAVHRDLIHLLDD 259
           LYLASDA  + +   L+ D
Sbjct: 240 LYLASDAGKYINGTTLVVD 258

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502636|gb|AFK39384.1| unknown [Lotus japonicus]

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/247 (78%), Positives = 215/247 (87%), Gaps = 1/247 (0%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           MESPFKG+ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL SAV+ L SL 
Sbjct: 1   MESPFKGNILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLDSAVSVLQSLS 60

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           IPAIG  GDVRK+EDA RVVEST  HFGK+DILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61  IPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           SVGTF MC EALKYLKKGG G+ SS +G  IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCSEALKYLKKGGLGRGSSGAGA-IINISATLHYTASWYQIHVSAAKAAVDATT 179

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           R+LALEWGTDY IRVNGIAPGPI  T G+SKLAP+EI +K+ DYM  YK GEKWDIAMAA
Sbjct: 180 RNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKSKDYMPLYKEGEKWDIAMAA 239

Query: 241 LYLASDA 247
           L+L SDA
Sbjct: 240 LFLVSDA 246

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519645|gb|AFK47884.1| unknown [Lotus japonicus]

 Score =  395 bits (1015), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/247 (78%), Positives = 215/247 (87%), Gaps = 1/247 (0%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           MESPFKG+ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL SAV+ L SL 
Sbjct: 1   MESPFKGNILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLDSAVSVLQSLS 60

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           IPAIG  GDVRK+EDA RVVEST  HFGK+DILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61  IPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           SVGTF MC EALKYLKKGG G+ SS +G  IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCSEALKYLKKGGLGRGSSGAGA-IINISATLHYTASWYQIHVSAAKAAVDATT 179

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           R+LALEWGTDY IRVNGIAPGPI  T G+SKLAP+EI +K+ DYM  YK GEKWDIAMAA
Sbjct: 180 RNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKSKDYMPLYKGGEKWDIAMAA 239

Query: 241 LYLASDA 247
           L+L SDA
Sbjct: 240 LFLVSDA 246

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249176|ref|NP_001240261.1| uncharacterized protein LOC100800885 [Glycine max] gi|255644975|gb|ACU22987.1| unknown [Glycine max]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 222/247 (89%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           MESPF+ +ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL+SAV+ L SL 
Sbjct: 1   MESPFRPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLA 60

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           IPA+G EGDVRK+EDAVRVVEST  HFG++DILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61  IPAVGFEGDVRKQEDAVRVVESTFKHFGRIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           SVGTF MCHEALKYLKKGG G+++SSSGG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           R+LALEWGTDY IRVNGIAPGPI DT G+SKLAP+EI SKA DYM  YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAA 240

Query: 241 LYLASDA 247
           L+L SDA
Sbjct: 241 LFLVSDA 247

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248016|ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycine max] gi|255647355|gb|ACU24144.1| unknown [Glycine max]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/247 (80%), Positives = 220/247 (89%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           MESPFK +ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL+SAV+ L SL 
Sbjct: 1   MESPFKPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLV 60

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           IPA+G EGDVRK+EDA RVVEST  HFG++DILVNAAAGNFLV AEDLS NGFRTV++ID
Sbjct: 61  IPAVGFEGDVRKQEDAARVVESTFKHFGRIDILVNAAAGNFLVSAEDLSSNGFRTVLDID 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           SVGTF MCHEALKYLKKGG G+++SSSGG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           R+LALEWGTDY IRVNGIAPGPI  T G+SKLAP+EI SKA DYM  YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAA 240

Query: 241 LYLASDA 247
           L+LASDA
Sbjct: 241 LFLASDA 247

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444144|ref|XP_004139835.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase-like [Cucumis sativus]

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/247 (77%), Positives = 213/247 (86%), Gaps = 1/247 (0%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M SPF+ DIL+GKVAL+TGGGSGIGFEI+ Q G+HGA+IAIMGRRK VL SAVAAL SLG
Sbjct: 1   MASPFRSDILRGKVALITGGGSGIGFEIATQFGQHGASIAIMGRRKQVLDSAVAALRSLG 60

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           I A G EGDVRK+EDA  VV+ST N  G LDILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61  ISAFGFEGDVRKQEDASSVVDSTFNKLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           SVGTF MCH+ALKYLKKGG G+ +S +GG IINISATLHYTA WYQIHVSAAKAAVD+IT
Sbjct: 121 SVGTFTMCHQALKYLKKGGPGR-NSLTGGTIINISATLHYTAAWYQIHVSAAKAAVDAIT 179

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           R+LALEWG D+ IRVNGIAPGPI+ T G+SKLAPEEI SK  + M  Y+ GEKWDIAMAA
Sbjct: 180 RNLALEWGADHDIRVNGIAPGPIQGTPGLSKLAPEEINSKIREDMPLYRIGEKWDIAMAA 239

Query: 241 LYLASDA 247
           LYLASDA
Sbjct: 240 LYLASDA 246

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297834090|ref|XP_002884927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330767|gb|EFH61186.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/247 (77%), Positives = 215/247 (87%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           MESPFK D+++G+VAL+TGGGSGIGFEIS Q GKHGA+IAIMGRRK VL  AV+AL SLG
Sbjct: 1   MESPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
           I AIGLEGDVRK+EDA RVVE+T  HFG++DILVNAAAGNFL  AEDLSPNGFRTV++ID
Sbjct: 61  IQAIGLEGDVRKQEDARRVVEATYQHFGRIDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           +VGTF MCH ALKYLKKGG G+ SS+ GG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 AVGTFNMCHAALKYLKKGGPGRDSSTGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           R+LALEWGTDY IRVNGIAPGPI  T G+SKL PEEI +K  +YM  YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAA 240

Query: 241 LYLASDA 247
           LYL+ D+
Sbjct: 241 LYLSCDS 247

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	259
TAIR|locus:2087770	298	SDRB "short-chain dehydrogenas	0.911	0.791	0.728	6.7e-88
UNIPROTKB|F1NG68	308	LOC100858408 "Uncharacterized	0.857	0.720	0.404	7.2e-36
MGI|MGI:1347059	292	Decr2 "2-4-dienoyl-Coenzyme A	0.861	0.763	0.388	2.5e-33
TIGR_CMR|BA_4204	254	BA_4204 "oxidoreductase, short	0.787	0.803	0.404	1.8e-32
ZFIN|ZDB-GENE-040426-2612	300	decr2 "2,4-dienoyl CoA reducta	0.768	0.663	0.406	1.8e-32
TAIR|locus:3437247	156	AT2G07640 [Arabidopsis thalian	0.424	0.705	0.636	2.3e-32
RGD|71002	292	Decr2 "2,4-dienoyl CoA reducta	0.857	0.760	0.391	4.7e-32
UNIPROTKB|Q5RBV3	292	DECR2 "Peroxisomal 2,4-dienoyl	0.861	0.763	0.393	6e-32
UNIPROTKB|Q9NUI1	292	DECR2 "Peroxisomal 2,4-dienoyl	0.861	0.763	0.388	9.8e-32
UNIPROTKB|F1PEZ3	266	DECR2 "Uncharacterized protein	0.837	0.815	0.391	2e-31

TAIR|locus:2087770 SDRB "short-chain dehydrogenase-reductase B" [Arabidopsis thaliana (taxid:3702)]

 Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
 Identities = 172/236 (72%), Positives = 191/236 (80%)

Query:     1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
             M+SPFK D+++G+VAL+TGGGSGIGFEIS Q GKHGA+IAIMGRRK VL  AV+AL SLG
Sbjct:     1 MDSPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60

Query:    61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
             I AIGLEGDVRK+EDA RVVE+T  HFGKLDILVNAAAGNFL  AEDLSPNGFRTV++ID
Sbjct:    61 IQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120

Query:   121 SVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSIT 180
             +VGTF MCH ALKYLKK                  ATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct:   121 AVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query:   181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
             R+LALEWGTDY IRVNGIAPGPI  T G+SKL PEEI +K  +YM  YK GEKWDI
Sbjct:   181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKVGEKWDI 236

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

UNIPROTKB|F1NG68 LOC100858408 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 95/235 (40%), Positives = 134/235 (57%)

Query:     5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPA 63
             F  DIL G+VA +TGGGSGIGF I+    +HG   AI GR ++ V++++   + + G   
Sbjct:    35 FSPDILAGRVAFITGGGSGIGFRIAEIFMRHGCRTAIAGRNQQRVVQASKKLVVATGQQC 94

Query:    64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + L  DVR+ +  V  V+ T+  F ++DILVN AAGNFL PA  LS N F+TV++ID++G
Sbjct:    95 LPLSIDVRQPQTIVAAVDETLKQFKQIDILVNGAAGNFLCPASALSFNAFKTVMDIDTLG 154

Query:   124 TFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRS 182
             TF        KY +                   ATL Y     Q+H  +AKAA+D++TR 
Sbjct:   155 TFNTSKVLFEKYFRDHGGVIINIT---------ATLSYRGQALQVHAGSAKAAIDAMTRH 205

Query:   183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR-SKATDYMAAYKFGEKWDI 236
             LA+EWG +  IRVN +APGPI  T G  +L  +  + SK  D +   + G K +I
Sbjct:   206 LAVEWGPNN-IRVNSLAPGPITGTEGFRRLGGKFAKDSKQFDTIPLQRAGNKTEI 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

MGI|MGI:1347059 Decr2 "2-4-dienoyl-Coenzyme A reductase 2, peroxisomal" [Mus musculus (taxid:10090)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 91/234 (38%), Positives = 127/234 (54%)

Query:     5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
             F  D+L+ KVA +TGGGSGIGF I+    +HG    I+GR  + V  +A   + + G   
Sbjct:    21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVGRSLQKVTTAAKKLVAATGKRC 80

Query:    64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + L  DVR   + +  V+  +  FGK++IL+N AAGNFL PA  LS N F+TV++ID++G
Sbjct:    81 LPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTIG 140

Query:   124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
             TF +   ++ Y K                   ATL       Q+H  AAKAAVD++TR L
Sbjct:   141 TFNV--SSVLYKK------FFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192

Query:   184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDI 236
             A+EWG    IRVN +APG I  T G+ +L      SK   +     + G K +I
Sbjct:   193 AVEWGPQN-IRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSNPIPRLGTKTEI 245

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=ISO

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=ISO;ISS

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISO;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IEA;ISO

TIGR_CMR|BA_4204 BA_4204 "oxidoreductase, short chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 87/215 (40%), Positives = 122/215 (56%)

Query:    10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             +K KV ++TGG SG+G  ++ +  K GA + I GR K  L  A   +       + ++ D
Sbjct:     1 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD 60

Query:    70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
             VR  +D  +++E     FG++DIL+N AAGNF+ PAEDLS NG+ +VI I   GTF  C 
Sbjct:    61 VRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFY-CS 119

Query:   130 EAL-KY-LKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
             +A+ KY ++K                  AT  + A    IH +AAKA V ++T++LA+EW
Sbjct:   120 QAIGKYWIEKGIKGNIINMV--------ATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEW 171

Query:   188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 222
             G  Y IRVN IAPGPI+ T G  KL   E  +K T
Sbjct:   172 GRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRT 206

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

ZFIN|ZDB-GENE-040426-2612 decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Danio rerio (taxid:7955)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 85/209 (40%), Positives = 113/209 (54%)

Query:     5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPA 63
             +  D+L  +VA +TGGGSGIGF I+  L +HG    I  R    +  A   L S  G   
Sbjct:    28 YSPDLLSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNLEKISQAAKKLTSTTGRRC 87

Query:    64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + +  DVR+ E  +  V+ T+  FG++DIL+N AAGNFL PA  LS N F+TV+EID++G
Sbjct:    88 LPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMG 147

Query:   124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
             TF           K                  ATL Y     Q+H  +AKAA D++TR L
Sbjct:   148 TF--------NTSKVIYDKWFKDHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHL 199

Query:   184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL 212
             A+EWG    +RVN +APGPI  T G  +L
Sbjct:   200 AVEWGPS-GVRVNTVAPGPISGTEGYRRL 227

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

TAIR|locus:3437247 AT2G07640 [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 70/110 (63%), Positives = 76/110 (69%)

Query:   127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
             MCH ALKYLKK                  ATLHYTA+ YQIHVSAAK AVD+ TR+LALE
Sbjct:     1 MCHAALKYLKKVAPGRDSSSGGGSIINISATLHYTASRYQIHVSAAKVAVDATTRNLALE 60

Query:   187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
             WGTDY IRVNGIA GPI  T G+SKL PEEI +K  +YM  YK GEKWDI
Sbjct:    61 WGTDYDIRVNGIATGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDI 110

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

RGD|71002 Decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Rattus norvegicus (taxid:10116)]

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 92/235 (39%), Positives = 127/235 (54%)

Query:     5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
             F  D+L+ KVA +TGGGSGIGF I+    +HG    I+ R    V  +A   + + G   
Sbjct:    21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVSRSLPRVSEAAKKLVAATGKRC 80

Query:    64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + L  DVR     +  V+  +  FGK+DIL+N AAGNFL PA  LS N F+TV++ID++G
Sbjct:    81 LPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLG 140

Query:   124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
             TF +    + Y K                   ATL       Q+H  AAKAAVD++TR L
Sbjct:   141 TFNVSR--VLYEK------FFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192

Query:   184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY--KFGEKWDI 236
             A+EWG    IRVN +APG I  T G+ +L   +  SK   Y+++   + G K +I
Sbjct:   193 AVEWGPQN-IRVNSLAPGAISGTEGLRRLGGPKASSKFK-YLSSPIPRLGTKTEI 245

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0004550 "nucleoside diphosphate kinase activity" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA;ISO

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0005840 "ribosome" evidence=IEA

GO:0006183 "GTP biosynthetic process" evidence=IEA

GO:0006228 "UTP biosynthetic process" evidence=IEA

GO:0006241 "CTP biosynthetic process" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA;ISO

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISO;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA;ISO

UNIPROTKB|Q5RBV3 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Pongo abelii (taxid:9601)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 92/234 (39%), Positives = 122/234 (52%)

Query:     5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
             F  D+L+ KVA +TGGGSGIGF I+    +HG    I  R    VL +A     + G   
Sbjct:    21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80

Query:    64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + L  DVR     V  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ G
Sbjct:    81 LPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140

Query:   124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
             TF +    + Y K                   ATL       Q+H  +AKAAVD++TR L
Sbjct:   141 TFNVSR--VLYEK------FFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192

Query:   184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDI 236
             A+EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +I
Sbjct:   193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEI 245

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISS

UNIPROTKB|Q9NUI1 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Homo sapiens (taxid:9606)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 91/234 (38%), Positives = 122/234 (52%)

Query:     5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
             F  D+L+ KVA +TGGGSGIGF I+    +HG    I  R    VL +A     + G   
Sbjct:    21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80

Query:    64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + L  DVR     +  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ G
Sbjct:    81 LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140

Query:   124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
             TF +    + Y K                   ATL       Q+H  +AKAAVD++TR L
Sbjct:   141 TFNVSR--VLYEK------FFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192

Query:   184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDI 236
             A+EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +I
Sbjct:   193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEI 245

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IDA

GO:0005102 "receptor binding" evidence=IPI

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IDA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IDA

UNIPROTKB|F1PEZ3 DECR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 90/230 (39%), Positives = 121/230 (52%)

Query:    10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
             L+ KVA +TGGGSGIGF I+    +HG    I  R    V ++A     + G   + L  
Sbjct:     1 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSFPRVSKAARKLAAATGQRCLPLSL 60

Query:    69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
             DVR        V+  +  FGK+DILVN AAGNFL PA  LS N F+TV++IDS+GTF M 
Sbjct:    61 DVRAFPAITAAVDQALKEFGKIDILVNCAAGNFLCPASALSFNAFKTVMDIDSLGTFNMS 120

Query:   129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
                + Y K                   ATL       Q+H  +AKAAVD++TR LA+EWG
Sbjct:   121 R--VLYEK------FFRDHGGVIVNITATLGTRGQVLQVHAGSAKAAVDAMTRHLAVEWG 172

Query:   189 TDYAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKATDYMAAYKFGEKWDI 236
                 IR+N +APGPI  T G  +L   +  + +K  D +   + G K ++
Sbjct:   173 PQN-IRINSLAPGPISGTEGFRRLGGHQASVSTKVLD-IPLQRLGNKTEV 220

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P32573	SPS19_YEAST	1, ., 3, ., 1, ., 3, 4	0.3661	0.9189	0.8150	yes	no
Q9NUI1	DECR2_HUMAN	1, ., 3, ., 1, ., 3, 4	0.4072	0.9150	0.8116	yes	no
Q9LTV6	DECR2_ARATH	1, ., 3, ., 1, ., 3, 4	0.7773	0.9536	0.8288	yes	no
O34717	FADH_BACSU	1, ., 3, ., 1, ., 3, 4	0.352	0.9266	0.9448	yes	no
Q5RBV3	DECR2_PONAB	1, ., 3, ., 1, ., 3, 4	0.4112	0.9150	0.8116	yes	no
Q9WV68	DECR2_MOUSE	1, ., 3, ., 1, ., 3, 4	0.4202	0.9498	0.8424	yes	no
Q9Z2M4	DECR2_RAT	1, ., 3, ., 1, ., 3, 4	0.4069	0.9459	0.8390	yes	no
Q9WYG0	Y325_THEMA	1, ., -, ., -, ., -	0.3333	0.8687	0.8964	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1.34	0.991
3rd Layer	1.3.1	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	259
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-100
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	8e-70
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-60
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-52
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-49
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-48
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-46
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-45
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	6e-44
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-43
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-42
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-42
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-41
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-40
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	8e-40
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-38
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-37
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	8e-37
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-36
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-34
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	2e-34
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	5e-34
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-33
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-33
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	6e-33
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-32
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-32
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	4e-32
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-32
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	5e-32
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-32
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-31
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-31
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-31
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-31
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	5e-31
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	7e-31
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-30
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-30
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	3e-30
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	4e-30
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-30
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	1e-29
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-29
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-29
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	3e-29
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-29
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-29
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	4e-28
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	7e-28
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	9e-28
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	9e-28
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-27
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	3e-27
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	8e-27
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-26
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-26
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-26
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	4e-26
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-26
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	4e-26
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	5e-26
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	7e-26
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-25
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-25
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-25
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	7e-25
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	1e-24
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-24
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-24
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-24
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	3e-24
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	3e-24
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-24
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-23
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-23
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-23
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	5e-23
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	5e-23
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	6e-23
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	6e-23
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	7e-23
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	8e-23
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-22
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	3e-22
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	5e-22
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	8e-22
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-21
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-21
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-21
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-21
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-21
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-21
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	3e-21
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-21
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	3e-21
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	4e-21
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	5e-21
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	5e-21
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	6e-21
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	7e-21
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	7e-21
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	9e-21
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-20
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-20
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-20
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-20
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-20
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	4e-20
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	4e-20
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	5e-20
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	6e-20
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-20
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-19
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-19
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-19
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-19
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-19
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	3e-19
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	5e-19
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	7e-19
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	9e-19
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-19
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-18
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	1e-18
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-18
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	3e-18
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	3e-18
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-18
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	4e-18
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	4e-18
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	5e-18
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	9e-18
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	2e-17
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-17
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	2e-17
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-17
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	4e-17
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-17
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	6e-17
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	9e-17
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	9e-17
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-16
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	1e-16
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	3e-16
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-16
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	3e-16
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	4e-16
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	4e-16
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	5e-16
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	6e-16
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-15
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-15
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-15
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	3e-15
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	4e-15
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	6e-15
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	6e-15
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-14
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-14
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	3e-14
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	5e-14
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	6e-14
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	6e-14
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-13
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-13
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-13
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	7e-13
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	2e-12
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-12
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-12
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-12
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	3e-12
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	3e-12
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	5e-12
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	6e-12
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	9e-12
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	9e-12
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-11
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-11
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	3e-11
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	9e-11
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-10
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-10
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-10
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-10
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-10
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	4e-10
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	4e-10
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	5e-10
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	5e-10
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	5e-10
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-10
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	7e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-09
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	2e-09
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-09
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-09
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-09
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	4e-09
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	4e-09
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	6e-09
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	7e-09
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	8e-09
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	9e-09
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	9e-09
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	1e-08
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-08
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-08
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	3e-08
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	4e-08
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	5e-08
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	5e-08
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	1e-07
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-07
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	2e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	2e-07
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	7e-07
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	7e-07
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	7e-07
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	7e-07
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	9e-07
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	9e-07
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-06
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-06
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	3e-06
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	5e-06
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	6e-06
pfam08659	181	pfam08659, KR, KR domain	1e-05
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-05
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-05
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	2e-05
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-05
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-05
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	7e-05
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	8e-05
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	8e-05
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	8e-05
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-04
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	1e-04
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-04
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	2e-04
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	3e-04
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-04
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	3e-04
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	8e-04
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	8e-04
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	0.001
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	0.003
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	0.004
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	0.004

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  292 bits (750), Expect = e-100
 Identities = 117/241 (48%), Positives = 150/241 (62%), Gaps = 10/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEG 68
           LKGKVA +TGGG+GIG  I+    + GA++AI GR+  VL +A   + S  G  A  ++ 
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DVR  E     V+ T+  FGK+DIL+N AAGNFL PAE LSPNGF+TVI+ID  GTF   
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTT 120

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
               K L +          GG I+NISAT  YT + +Q+H +AAKA VD++TRSLA+EWG
Sbjct: 121 KAVGKRLIEAKH-------GGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWG 173

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
             Y IRVN IAPGPI  T G+ +LAP      K  + +   + G   +IA  AL+L SDA
Sbjct: 174 -PYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSDA 232

Query: 248 A 248
           A
Sbjct: 233 A 233

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  215 bits (550), Expect = 8e-70
 Identities = 99/249 (39%), Positives = 136/249 (54%), Gaps = 14/249 (5%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M + F      GK  ++ GG SGI   I+    + GA +A+  R +  + +AVA L   G
Sbjct: 1   MTTMFD---FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG 57

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
              +G+  DVR             + FG +D+LV+ AAGNF  PA  +S NGF+TV++ID
Sbjct: 58  PEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDID 117

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
            +GTF +   A   L++          G  II ISA   +     Q HV AAKA VD +T
Sbjct: 118 LLGTFNVLKAAYPLLRR---------PGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLT 168

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMA 239
           R+LALEWG +  IRVN I PGPI  T G+++LAP  E+++     +   + G K DIA A
Sbjct: 169 RTLALEWGPE-GIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANA 227

Query: 240 ALYLASDAA 248
           AL+LASD A
Sbjct: 228 ALFLASDMA 236

Length = 264

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  191 bits (486), Expect = 2e-60
 Identities = 97/239 (40%), Positives = 134/239 (56%), Gaps = 10/239 (4%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
            KV ++TGG SG+G  ++ +  + GA + I GR K  L  A   +       + ++ DVR
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
             ED  ++VE     FG++D L+N AAGNF+ PAEDLS NG+ +VI+I   GTF      
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAV 120

Query: 132 LKY-LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
            KY ++KG +G         IIN+ AT  + A    IH +AAKA V ++TR+LA+EWG  
Sbjct: 121 GKYWIEKGIKGN--------IINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRK 172

Query: 191 YAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           Y IRVN IAPGPI+ T G  KL   EE   +    +   + G   +IA  A +L SD A
Sbjct: 173 YGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEA 231

Length = 252

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  168 bits (428), Expect = 7e-52
 Identities = 86/234 (36%), Positives = 131/234 (55%), Gaps = 11/234 (4%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
           AL+TG  SGIG  I+ +L + GA + +  R +  L   +AA+ +LG  A+ ++ DV   E
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALA-ELAAIEALGGNAVAVQADVSDEE 59

Query: 75  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
           D   +VE  +  FG+LDILVN A      P E+L+   +  V++++  G F++   AL +
Sbjct: 60  DVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPH 119

Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
           +KK G        GG I+NIS+         Q   +A+KAA++ +TRSLALE    Y IR
Sbjct: 120 MKKQG--------GGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELA-PYGIR 170

Query: 195 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           VN +APG + DT  ++KL PEE   +    +   + G   ++A A ++LASD A
Sbjct: 171 VNAVAPGLV-DTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEA 223

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  162 bits (413), Expect = 2e-49
 Identities = 82/240 (34%), Positives = 119/240 (49%), Gaps = 11/240 (4%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
            L+GK AL+TG   GIG  I+L+L   GA + I    +    +  A L + G  A  L  
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV        ++E+ +  FG LDILVN A          +S   +  VI+++  GTF + 
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVV 121

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             AL  + K   G+        I+NIS+    T    Q + SAAKA V   T++LALE  
Sbjct: 122 RAALPPMIKARYGR--------IVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELA 173

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           +   I VN +APG I DT     L PEE++++    +   + G+  ++A A  +LASDAA
Sbjct: 174 S-RGITVNAVAPGFI-DTDMTEGL-PEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAA 230

Length = 246

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  158 bits (402), Expect = 8e-48
 Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 12/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
           L+GKVAL+TG   GIG  I+ +L   GA + I     +    + VA + +LG  A+ ++G
Sbjct: 3   LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQG 62

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV   E   R V+     FG +DILVN A          +    +  VI+ +  G F + 
Sbjct: 63  DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLT 122

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
               + + K           G IINIS+ +       Q + +A+KA V   T+SLA E  
Sbjct: 123 KAVARPMMKQR--------SGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELA 174

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           +   I VN +APG I +T     L PE+++      +   + G+  +IA A  +LASD A
Sbjct: 175 S-RGITVNAVAPGFI-ETDMTDAL-PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEA 231

Length = 248

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  154 bits (392), Expect = 4e-46
 Identities = 87/247 (35%), Positives = 124/247 (50%), Gaps = 18/247 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TGG  G+G +I+  LG+ GA + +  R+   L  A A L +LGI A+ +  D
Sbjct: 10  LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAAD 69

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V    D  R+ E T+  FG +DILVN A   +  PAED     +  V+ ++  G F++  
Sbjct: 70  VADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQ 129

Query: 130 EALKYLKKGGRGQASSSSGGIIINIS--ATL--HYTATWYQIHVSAAKAAVDSITRSLAL 185
              K               G IIN++  A L  +       I  + +K AV + TR+LA 
Sbjct: 130 AVAKRSMIPRG-------YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAA 182

Query: 186 EWGTDYAIRVNGIAPG--PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           EWG  + IRVN IAPG  P K T G  +   E++ +         + G+  D+  AAL L
Sbjct: 183 EWG-PHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHT----PLGRLGDDEDLKGAALLL 237

Query: 244 ASDAAVH 250
           ASDA+ H
Sbjct: 238 ASDASKH 244

Length = 259

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  152 bits (385), Expect = 2e-45
 Identities = 82/240 (34%), Positives = 123/240 (51%), Gaps = 9/240 (3%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEG 68
           LKGKVAL+TG  SGIG  I+++L   GA + +  R ++      V  + ++G  AI ++ 
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV K ED V + +S I  FG LDILVN A       + +++   +  VI+++  G F+  
Sbjct: 61  DVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLCA 120

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA+K  +K       S   G IIN+S+          ++ +A+K  V  +T++LA E+ 
Sbjct: 121 REAIKRFRK-------SKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYA 173

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
               IRVN IAPG I            E R+     +   + GE  +IA AA +LASD A
Sbjct: 174 -PKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLASDEA 232

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  148 bits (376), Expect = 6e-44
 Identities = 81/246 (32%), Positives = 122/246 (49%), Gaps = 20/246 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR--KTVLRSAVAALHSLGIP-AIGL 66
           L GKVAL+TG  SGIG  I+  L + GA + +  RR  +    +  AA+   G   A  +
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62

Query: 67  EGDVRKREDAVR-VVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
             DV   E++V  +V +    FG++DILV NA       P E+L+   +  VI+++ +G 
Sbjct: 63  AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGA 122

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           F++   AL  +KK             I+NIS+         Q   +A+KAA+  +T++LA
Sbjct: 123 FLLTRAALPLMKK-----------QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALA 171

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALY 242
           LE      IRVN +APG I DT   + L  A  E   +    +   + G   ++A A  +
Sbjct: 172 LELA-PRGIRVNAVAPGYI-DTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAF 229

Query: 243 LASDAA 248
           LASD A
Sbjct: 230 LASDEA 235

Length = 251

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  146 bits (370), Expect = 5e-43
 Identities = 75/246 (30%), Positives = 115/246 (46%), Gaps = 21/246 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVA++TG  SGIG  I+ +    GA + +  R +       A + + G  AI +  D
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAAD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
           V    D    V + +  FG +DILVN A       P  D+    F  +  ++    ++  
Sbjct: 62  VSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWT 121

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISAT--LHYTA--TWYQIHVSAAKAAVDSITRSLA 184
             A+  ++  G        GG I+N+++T  L       WY    +A+K AV ++T++LA
Sbjct: 122 QAAVPAMRGEG--------GGAIVNVASTAGLRPRPGLGWY----NASKGAVITLTKALA 169

Query: 185 LEWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
            E G D  IRVN +AP  ++             E R+K    +   + G   DIA AAL+
Sbjct: 170 AELGPD-KIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALF 228

Query: 243 LASDAA 248
           LASD A
Sbjct: 229 LASDEA 234

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  144 bits (366), Expect = 2e-42
 Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 17/239 (7%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KVAL+TG   GIG  I+L+L   GA +A+  R +      V  + +LG  A  LE DV  
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 73  REDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           RE    +VE     FG +DILVN A     N L+    +S   +  VI ++  G F +  
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGITRDNLLM---RMSEEDWDAVINVNLTGVFNVTQ 117

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             ++ + K   G+        IINIS+ +       Q + +A+KA V   T+SLA E  +
Sbjct: 118 AVIRAMIKRRSGR--------IINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELAS 169

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              I VN +APG I DT     L PE+++ K    +   + G   ++A A  +LASD A
Sbjct: 170 -RGITVNAVAPGFI-DTDMTDAL-PEKVKEKILKQIPLGRLGTPEEVANAVAFLASDDA 225

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  144 bits (365), Expect = 3e-42
 Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 11/240 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+G+VAL+TG   GIG  I+++L   GA + ++        +    + + G  A   + D
Sbjct: 4   LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVD 63

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           VR R      V + +  FG+LDILV  A    L P  ++    +  VI+++  GTF++  
Sbjct: 64  VRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQ 123

Query: 130 EALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            AL  L + G        GG I+   S            H +A+KA +   TR+LALE  
Sbjct: 124 AALPALIRAG--------GGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELA 175

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
               I VN + PG + DT     L   +        +   + GE  DIA A L+LASD A
Sbjct: 176 A-RNITVNSVHPGGV-DTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEA 233

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  142 bits (361), Expect = 1e-41
 Identities = 82/241 (34%), Positives = 118/241 (48%), Gaps = 13/241 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGKVAL+TG   GIGF I+  L + GA I I  R +     A   +   G+ A     D
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   E     VE+    FGK+DILVN A      PAE+     +R VI+++  G F +  
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQ 122

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              +++ K G G+        IINI + L           +A+K  V  +T++LA EW  
Sbjct: 123 AVARHMIKQGHGK--------IINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWA- 173

Query: 190 DYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
            + I+VN IAPG    + T  V  +A  E        + A ++G+  D+  AA++LASDA
Sbjct: 174 RHGIQVNAIAPGYFATEMTEAV--VADPEFNDDILKRIPAGRWGQPEDLVGAAVFLASDA 231

Query: 248 A 248
           +
Sbjct: 232 S 232

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  139 bits (353), Expect = 1e-40
 Identities = 78/240 (32%), Positives = 119/240 (49%), Gaps = 12/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           L GKVA++TG   GIG  I+  L K GA + I     +   +  +  +   G  AI ++ 
Sbjct: 3   LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV   ED   +VE  +  FGK+DILVN A  +      D++   +  VI+++  G  ++ 
Sbjct: 63  DVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLT 122

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             AL Y+ K           G+I+NIS+         ++  SA+K AV++ T++LA E  
Sbjct: 123 RYALPYMIKRK--------SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELA 174

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
               IRVN +APG I DT   S  + E+    A +     + G+  +IA   L+LASD A
Sbjct: 175 P-SGIRVNAVAPGAI-DTEMWSSFSEEDKEGLAEEIPLG-RLGKPEEIAKVVLFLASDDA 231

Length = 247

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  137 bits (348), Expect = 8e-40
 Identities = 83/240 (34%), Positives = 116/240 (48%), Gaps = 22/240 (9%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKR 73
           AL+TG   GIG  I+L+L K GA + I  R         V  L + G+ A+G+  DV  R
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 74  EDAVRVVESTINHFGKLDILVNAA---AGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMC 128
           ED   VVE      G +DILVN A     N L+    ED     +  VI+ +  G F + 
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEED-----WDAVIDTNLTGVFNLT 115

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
              L+ + K   G+        IINIS+ +       Q + +A+KA V   T+SLA E  
Sbjct: 116 QAVLRIMIKQRSGR--------IINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELA 167

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           +   I VN +APG I DT    KL  E+++ K    +   +FG   ++A A  +LASD A
Sbjct: 168 S-RNITVNAVAPGFI-DTDMTDKL-SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEA 224

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  133 bits (338), Expect = 3e-38
 Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 12/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEG 68
           L G+VAL+TG   G+G  I+L+L + GA + +  R  +      V A+ +LG  A  ++ 
Sbjct: 4   LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQA 63

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV  +      V + +  FG++DILVN A      P  D+S + +  VI+++  G F + 
Sbjct: 64  DVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLL 123

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
              +  ++K          GG I+NIS+         + + +AAKA +  +T++LA E  
Sbjct: 124 RAVVPPMRKQR--------GGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELA 175

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            +Y I VN +APG I DT        E   +K        + G   DIA A  +L SDA+
Sbjct: 176 -EYGITVNMVAPGDI-DTDMKEATIEEAREAK-DAETPLGRSGTPEDIARAVAFLCSDAS 232

Length = 249

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  130 bits (330), Expect = 3e-37
 Identities = 80/240 (33%), Positives = 112/240 (46%), Gaps = 13/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           L GKVAL+TG   GIG  I+ +L + GA++ +     K      VA + + G  AI ++ 
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV       R+ ++    FG +DILVN A      P  + S   F  +  +++ G F + 
Sbjct: 61  DVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVL 120

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA K L+ GGR          IINIS++L    T      + +KAAV++ TR LA E G
Sbjct: 121 QEAAKRLRDGGR----------IINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELG 170

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
               I VN +APGP+ DT        EE            + GE  DIA    +LAS   
Sbjct: 171 -GRGITVNAVAPGPV-DTDMFYAGKTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLASPDG 228

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  130 bits (328), Expect = 8e-37
 Identities = 79/242 (32%), Positives = 116/242 (47%), Gaps = 14/242 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
           LKGKVA++TGG  GIG  I+  L + GA +AI+          A       G+     + 
Sbjct: 6   LKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKC 65

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV  +E   +  +     FGK+DIL+  A      PA D +   +  VI+++  G F   
Sbjct: 66  DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCA 125

Query: 129 HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
             A K  KK G+G    ++S  G I+N            Q   +A+KAAV  + +SLA+E
Sbjct: 126 QAAAKIFKKQGKGSLIITASMSGTIVNRPQP--------QAAYNASKAAVIHLAKSLAVE 177

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
           W   Y IRVN I+PG I     ++    +E+R K   Y+   +     ++  A LYLASD
Sbjct: 178 W-AKYFIRVNSISPGYID--TDLTDFVDKELRKKWESYIPLKRIALPEELVGAYLYLASD 234

Query: 247 AA 248
           A+
Sbjct: 235 AS 236

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  129 bits (326), Expect = 2e-36
 Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 11/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEG 68
           L+GKV ++TGG +G+G  ++++ GK  A + I  R  +         +   G  AI ++G
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG 64

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV    D V ++++ +  FG LD+++N A     VP+ ++S   +  VI  +  G F+  
Sbjct: 65  DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGS 124

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
            EA+KY  +           G IIN+S ++H    W   +H +A+K  V  +T +LA+E+
Sbjct: 125 REAIKYFVEHDI-------KGNIINMS-SVHEQIPWPLFVHYAASKGGVKLMTETLAMEY 176

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
                IRVN I PG I       K A  + R+     +     G+  +IA  A +LAS  
Sbjct: 177 APK-GIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE 235

Query: 248 A 248
           A
Sbjct: 236 A 236

Length = 261

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  124 bits (313), Expect = 2e-34
 Identities = 77/242 (31%), Positives = 107/242 (44%), Gaps = 16/242 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG   G+G   +  L + GA +A         R   AAL + G  A  +  D
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +       R  ++     G LD LVN A       A +L  + +  V+ ++  GTF+M  
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLR 124

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLALE 186
            AL +L+  GRG+        I+N+++    TA W    +    A+K AV  +TRSLA E
Sbjct: 125 AALPHLRDSGRGR--------IVNLASD---TALWGAPKLGAYVASKGAVIGMTRSLARE 173

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
            G    I VN IAPG     A     A E          A  +     D+A A L+L SD
Sbjct: 174 LGGR-GITVNAIAPGLTATEATAYVPADERHAYYL-KGRALERLQVPDDVAGAVLFLLSD 231

Query: 247 AA 248
           AA
Sbjct: 232 AA 233

Length = 250

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  123 bits (311), Expect = 2e-34
 Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 14/237 (5%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKR 73
           AL+TGG  GIG  I+L+L + GA + I  R+ K       A +  LG  A+ +  DV + 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 74  EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
           +D   +  +    FG+LD+LV+ AA     P  +L+P  +   +  +         +A K
Sbjct: 61  QDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAK 120

Query: 134 YLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
            +++ G        GG I+ IS+   +     +  +    AKAA++++ R LA+E G   
Sbjct: 121 LMRERG--------GGRIVAISSLGSIRALPNYLAV--GTAKAALEALVRYLAVELG-PR 169

Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            IRVN ++PG I   A       E++   A     A + G   D+A A  +L SDAA
Sbjct: 170 GIRVNAVSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAA 226

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  122 bits (309), Expect = 5e-34
 Identities = 77/248 (31%), Positives = 114/248 (45%), Gaps = 25/248 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
           L G+VA +TG GSGIG  I++ L + GA +A+   R    L      + + G  AI +  
Sbjct: 6   LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAA 65

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV  + D    V  T    G L + VNAA      PAE++    ++TV++I+  G F+ C
Sbjct: 66  DVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSC 125

Query: 129 HEALKYLKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
               + + + G G     AS S  GII+N            Q H +A+KA V  +++SLA
Sbjct: 126 QAEARAMLENGGGSIVNIASMS--GIIVNRGLL--------QAHYNASKAGVIHLSKSLA 175

Query: 185 LEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           +EW     IRVN I+PG    P+     +               MA        ++   A
Sbjct: 176 MEW-VGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVD-----EMVGPA 229

Query: 241 LYLASDAA 248
           ++L SDAA
Sbjct: 230 VFLLSDAA 237

Length = 254

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 2e-33
 Identities = 87/239 (36%), Positives = 124/239 (51%), Gaps = 13/239 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVA++TGG SGIG  I+      GA +A++ R + V   A   L   G  A GL  D
Sbjct: 13  LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLL---GGNAKGLVCD 69

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +     V + I+ FG++DILVN+A    L PAED+S   +   I+I+  G+F+M  
Sbjct: 70  VSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQ 129

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              +++   G        GG I+N+++     A    +   A+KA V  +T+ LALEWG 
Sbjct: 130 AVGRHMIAAG--------GGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWG- 180

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            Y I VN I+P  +  T    K    E   +A   + A +F    +IA AAL+LASDAA
Sbjct: 181 PYGITVNAISP-TVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAA 238

Length = 255

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  121 bits (306), Expect = 3e-33
 Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 24/207 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGKVA++TGGG  +G  ++ +L + GA +AI+ R +    + VA + + G  A+ ++ D
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGN----------FLVPAE-----DLSPNGFR 114
           V  +E   +  +  +  FG  DIL+N A GN            +        DL   GF 
Sbjct: 68  VLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127

Query: 115 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
            V +++ +GT +      K +            GG IINIS+   +T        SAAKA
Sbjct: 128 FVFDLNLLGTLLPTQVFAKDMVGRK--------GGNIINISSMNAFTPLTKVPAYSAAKA 179

Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPG 201
           A+ + T+ LA+ +     IRVN IAPG
Sbjct: 180 AISNFTQWLAVHFAKV-GIRVNAIAPG 205

Length = 278

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  120 bits (302), Expect = 6e-33
 Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 22/251 (8%)

Query: 2   ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI 61
               +   L GK A++TG G+GIG EI++     GA++ +           V  +  LG 
Sbjct: 4   SDNLR---LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG 60

Query: 62  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN----FLVPAEDLSPNGFRTVI 117
            A     D+   ++   + +  ++  GK+DILVN A G     F +P  D     FR   
Sbjct: 61  QAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMAD-----FRRAY 115

Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
           E++    F +       ++K G        GG+I+ I++             +++KAA  
Sbjct: 116 ELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAAS 167

Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
            + R++A + G    IRVNGIAPG I   A  S + P EI  K   +    + G+  DIA
Sbjct: 168 HLVRNMAFDLGEK-NIRVNGIAPGAILTDALKSVITP-EIEQKMLQHTPIRRLGQPQDIA 225

Query: 238 MAALYLASDAA 248
            AAL+L S AA
Sbjct: 226 NAALFLCSPAA 236

Length = 255

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  119 bits (299), Expect = 1e-32
 Identities = 85/240 (35%), Positives = 123/240 (51%), Gaps = 12/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           L GKVA++TGG  GIG  I++ L + GA + I     K    + V  L   G     ++ 
Sbjct: 4   LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQA 63

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV K EDA R+VE  +NHFGK+DILVN A        + L+   +  VI+++    F   
Sbjct: 64  DVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTT 123

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
              L Y+        + +  G II+IS+ +     + Q + SAAKA +   T+SLALE  
Sbjct: 124 SAVLPYI--------TEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELA 175

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
               + VN I PG I DT  V+++ PEE+R K    +   +FG+  +IA   +YL  D A
Sbjct: 176 KT-NVTVNAICPGFI-DTEMVAEV-PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDGA 232

Length = 247

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  119 bits (299), Expect = 2e-32
 Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 23/249 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGK+AL+TG   GIGF I+    K GA I      + ++   +AA   LGI A G   D
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCD 67

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +    +V       G +DILVN A     +P  ++S   FR VI+ID    FI+  
Sbjct: 68  VTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSK 127

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL----HYTATWYQIHVSAAKAAVDSITRSLAL 185
             +  + K G G+        IINI + +      T + Y    +AAK  +  +T+++A 
Sbjct: 128 AVIPSMIKKGHGK--------IINICSMMSELGRETVSAY----AAAKGGLKMLTKNIAS 175

Query: 186 EWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYM----AAYKFGEKWDIAMA 239
           E+G +  I+ NGI PG I    TA + +L  +  R     ++     A ++G+  D+A  
Sbjct: 176 EYG-EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGP 234

Query: 240 ALYLASDAA 248
           A++LASDA+
Sbjct: 235 AVFLASDAS 243

Length = 265

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  117 bits (296), Expect = 4e-32
 Identities = 78/247 (31%), Positives = 120/247 (48%), Gaps = 25/247 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVA++TG GSG G  I+ +  + GA + I            A +   G  AI ++ D
Sbjct: 3   LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADI---GEAAIAIQAD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V KR D   +VE+ ++ FG+LDILVN A       P  ++    F  V  ++    ++  
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTA----TWYQIHVSAAKAAVDSITRSLA 184
              + ++++ G        GG+IINI++T         TWY    +A+K  V + T+++A
Sbjct: 120 QALVPHMEEQG--------GGVIINIASTAGLRPRPGLTWY----NASKGWVVTATKAMA 167

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKATDYMAAYKFGEKWDIAMAAL 241
           +E      IRVN + P    +T  +S    E   E R+K    +   +     DIA AAL
Sbjct: 168 VELAPR-NIRVNCLCP-VAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANAAL 225

Query: 242 YLASDAA 248
           YLASD A
Sbjct: 226 YLASDEA 232

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 4e-32
 Identities = 82/250 (32%), Positives = 116/250 (46%), Gaps = 21/250 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGKVAL+TG  SGIG EI+L L K GA + I         +A  AL   G  AIG+  D
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   E     ++  +  FG +DILVN A    + P ED     ++ +I I   G F+   
Sbjct: 62  VTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTK 121

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            AL  +K  G        GG IIN+++      +  +    +AK  +  +T+ +ALE G 
Sbjct: 122 AALPIMKAQG--------GGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALE-GA 172

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWDIAM 238
            + + VN I PG + DT  V K  P+  + +        +           F    +IA 
Sbjct: 173 THGVTVNAICPGYV-DTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIAD 231

Query: 239 AALYLASDAA 248
            AL+LAS AA
Sbjct: 232 YALFLASFAA 241

Length = 258

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  117 bits (296), Expect = 5e-32
 Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 17/246 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGL 66
           L GKVA++TG  SGIG   ++   + GA +A+ GR    L     +    G+     + +
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
             D+ + E   R++ +T+  FG+LDILVN A        ED     +  V+ ++      
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIY 120

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +   A+ +L K         + G I+N+S+     +    ++   +KAA+D  TR  ALE
Sbjct: 121 LTKLAVPHLIK---------TKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALE 171

Query: 187 WGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
                 +RVN ++PG          G+ +    +  S+A +     + G   ++A A  +
Sbjct: 172 LAP-KGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAF 230

Query: 243 LASDAA 248
           LASDA+
Sbjct: 231 LASDAS 236

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  117 bits (295), Expect = 6e-32
 Identities = 80/253 (31%), Positives = 117/253 (46%), Gaps = 34/253 (13%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            KGKVAL+TGG  GIG  I+    + GA +A++        +    L   G+  I  + D
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENEAKELREKGVFTI--KCD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  R+   +  E     FG++D+LVN A   +L+P E+     +  +I+I+  G     +
Sbjct: 60  VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTY 119

Query: 130 EALKYLKKGGRGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSITRSLA 184
           E L  LK         S  G I+NI++     T     T+Y I     KA +  +TR LA
Sbjct: 120 EFLPLLKL--------SKNGAIVNIASNAGIGTAAEGTTFYAI----TKAGIIILTRRLA 167

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-------RSKATDYMAAYKFGEKWDIA 237
            E G  Y IRVN +APG ++    +S  + EE        R+K          G+  DIA
Sbjct: 168 FELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKT----TGKPEDIA 222

Query: 238 MAALYLASDAAVH 250
              L+LASD A +
Sbjct: 223 NIVLFLASDDARY 235

Length = 255

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  116 bits (293), Expect = 1e-31
 Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 14/243 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+VA++TG GSGIG   +    + GA + +  R        VAA  + G  A   +GD
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA-ERVAAAIAAGGRAFARQGD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   E    +V+     +G+LD+LVN A               +  V+ ++  G F+   
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAK 121

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A+  +++ G        GG I+N ++ L       +    A+K A+ S+TR++AL+  T
Sbjct: 122 YAIPIMQRQG--------GGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHAT 173

Query: 190 DYAIRVNGIAPGPIKD---TAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           D  IRVN +APG I         ++ A PE +R          +FG   ++A AAL+LAS
Sbjct: 174 D-GIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLAS 232

Query: 246 DAA 248
           D +
Sbjct: 233 DES 235

Length = 252

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 1e-31
 Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 13/193 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGKVAL+TGG  GIGF I+  L   G  +AI  R +  L  A A L++ G   +GL  D
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAAD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           VR   D  R V++ +  FG LD+L+ NA  G+F  P E+L+P  +R VI+ +  G F   
Sbjct: 63  VRDEADVQRAVDAIVAAFGGLDVLIANAGVGHF-APVEELTPEEWRLVIDTNLTGAFYTI 121

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A+  LK+G         GG IINIS+             +A+K  +   + +  L+  
Sbjct: 122 KAAVPALKRG---------GGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDL- 171

Query: 189 TDYAIRVNGIAPG 201
             Y I+V+ I PG
Sbjct: 172 RQYGIKVSTIMPG 184

Length = 237

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  117 bits (294), Expect = 1e-31
 Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 15/206 (7%)

Query: 2   ESPFKG-DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHS 58
           E  +KG   LKGK AL+TGG SGIG  +++   + GA +AI  +   +         +  
Sbjct: 15  EKSYKGSGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEE 74

Query: 59  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVI 117
            G   + + GD+        +V+  +  FGKLDILVN AA      + ED++        
Sbjct: 75  EGRKCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTF 134

Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
             +    F +   AL +LKKG            IIN ++   Y  + + +  +A K A+ 
Sbjct: 135 RTNIFSMFYLTKAALPHLKKGSS----------IINTTSVTAYKGSPHLLDYAATKGAIV 184

Query: 178 SITRSLALEWGTDYAIRVNGIAPGPI 203
           + TR L+L+   +  IRVN +APGPI
Sbjct: 185 AFTRGLSLQLA-EKGIRVNAVAPGPI 209

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  116 bits (291), Expect = 3e-31
 Identities = 79/260 (30%), Positives = 116/260 (44%), Gaps = 32/260 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK KVA++TGG   +G  ++  L + GA +A +GR +         + +LG  AI L  D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGN---------FLVPAE-----DLSPNGFRT 115
           V  R    R  E  +  FG +DIL+N A GN            P       DL   G+  
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175
           V +++  G+F+      K + +          GG IINIS+   ++        SAAKAA
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQK--------GGSIINISSMNAFSPLTKVPAYSAAKAA 174

Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY------- 228
           V + T+ LA+E+ T   +RVN IAPG          L   +     TD            
Sbjct: 175 VSNFTQWLAVEFATT-GVRVNAIAPGFFVTPQNRKLLINPD--GSYTDRSNKILGRTPMG 231

Query: 229 KFGEKWDIAMAALYLASDAA 248
           +FG+  ++  A L+LAS+ A
Sbjct: 232 RFGKPEELLGALLFLASEKA 251

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  115 bits (289), Expect = 5e-31
 Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           GKVAL+T   SGIG  I+  L + GA +AI  R +  L  A + L + G   + +  D+ 
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
             ED  R+VE   + FG++DILVN A G    P  +L+   +    ++  +    +    
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAV 120

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
           L  +K+           G I+NIS+          +  + A+A +  + ++L+ E   D 
Sbjct: 121 LPGMKE--------RGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPD- 171

Query: 192 AIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
            + VN + PG I         +  A    ++ EE   +    +   + G+  ++A    +
Sbjct: 172 GVTVNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAF 231

Query: 243 LASDAA 248
           LAS+ A
Sbjct: 232 LASEKA 237

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  114 bits (287), Expect = 7e-31
 Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 11/236 (4%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
           VA++TGG +GIG  I+  L K GA++ I   +     +  AA+   G  AIGLE +V   
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 74  EDAVRVVESTINHFGKLDILVNAAAGNFLVPAE-DLSPNGFRTVIEIDSVGTFIMCHEAL 132
           +D   VV++T++ FG + ILVN A G    P +  ++   F    +++    F +     
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
            +++K G        GG I+NIS+              ++KAAV+ +TR+LA + G    
Sbjct: 121 PHMQKAG--------GGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPK-G 171

Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           IRVN +APG +K  A  S L P EI      +    + GE  DIA AAL+L S A+
Sbjct: 172 IRVNAVAPGAVKTDALASVLTP-EIERAMLKHTPLGRLGEPEDIANAALFLCSPAS 226

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 1e-30
 Identities = 71/249 (28%), Positives = 110/249 (44%), Gaps = 20/249 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G   L+TGG SGIG  I+    + GA + +    +  L +  A L   G        D
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP--GAKVTATVAD 66

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMC 128
           V       RV ++ +  FG LD+LVN A         ++++P  +   + ++  G F   
Sbjct: 67  VADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFA 126

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A+  LK  G        GG+II +S+         +   +A+K AV  + +SLA+E G
Sbjct: 127 RAAVPLLKASGH-------GGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELG 179

Query: 189 TDYAIRVNGIAPG---------PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
               IRVN I PG          I+  A    +  +E+  +  + ++  +  E  DIA  
Sbjct: 180 -PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAAT 238

Query: 240 ALYLASDAA 248
           AL+LAS AA
Sbjct: 239 ALFLASPAA 247

Length = 264

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  113 bits (284), Expect = 2e-30
 Identities = 71/240 (29%), Positives = 106/240 (44%), Gaps = 10/240 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GK AL+TGG  GIG+ I  +L   GA +    R +  L   +      G    G   D
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCD 63

Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V  R +   ++++  +HF GKL+ILVN A  N    A+D +   +  ++  +    + + 
Sbjct: 64  VSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLS 123

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A   LK  G G         I+ IS+     A        A K A++ +TRSLA EW 
Sbjct: 124 RLAHPLLKASGNGN--------IVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWA 175

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            D  IRVN +AP  I        +  +E   K  +     +FGE  ++A    +L   AA
Sbjct: 176 KD-NIRVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAFLCMPAA 234

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  113 bits (284), Expect = 3e-30
 Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 12/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
             GKVAL+TG   GIG  I+L+L + G  IA+   R +         + +LG  A+ ++ 
Sbjct: 2   FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKA 61

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +V   E    +       FG+LD+ VN AA   L PA +L  + +   + I++       
Sbjct: 62  NVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCA 121

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA K ++K G        GG II++S+            V  +KAA++++TR LA+E  
Sbjct: 122 QEAAKLMEKVG--------GGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELA 173

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
               I VN ++ G + DT  +      EE+   A     A +  E  D+A A L+L S  
Sbjct: 174 P-KGIAVNAVSGGAV-DTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPE 231

Query: 248 A 248
           A
Sbjct: 232 A 232

Length = 250

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  112 bits (283), Expect = 4e-30
 Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 12/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG  +G+G  I++ L + GA I   GR +         + +LG   + L  D
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTAD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   E    +V+S +  FG +DILVN A       AE+ S   +  V+ ++    F +  
Sbjct: 61  LSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQ 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A K+  K GR       GG IINI++ L +         +A+K AV  +T+ LA EW  
Sbjct: 121 AAAKHFLKQGR-------GGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAA 173

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIAMAALYLASDAA 248
              I VN IAPG +  T     L  +E R+ A  + + A ++G   DI   A++LAS A+
Sbjct: 174 -KGINVNAIAPGYM-ATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSAS 231

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  112 bits (282), Expect = 4e-30
 Identities = 74/242 (30%), Positives = 110/242 (45%), Gaps = 13/242 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGKVA++TGG  G+G   +  L   GA + +        ++A A    LG  A     D
Sbjct: 3   LKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAA---ELGDAARFFHLD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +    VV++    FG+LD+LVN A        E  +   +R +++I+  G F+   
Sbjct: 60  VTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTR 119

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +  +K+ G        GG IIN+S+             +A+K AV  +T+S ALE  T
Sbjct: 120 AVIPPMKEAG--------GGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECAT 171

Query: 190 -DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
             Y IRVN + PG I  T    +L   +            + GE  +IA A +YLASD +
Sbjct: 172 QGYGIRVNSVHPGYIY-TPMTDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVYLASDES 230

Query: 249 VH 250
             
Sbjct: 231 SF 232

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  111 bits (280), Expect = 1e-29
 Identities = 74/249 (29%), Positives = 112/249 (44%), Gaps = 21/249 (8%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           GK AL+TG  SGIG  I+  L   GA + +    +    +A       G   I L  DV 
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
           K ++   ++ +    FG LDILVN A    + P E+  P  +  +I +     F     A
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAA 120

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
           L ++KK G G+        IINI++     A+ ++    AAK  +  +T+ LALE   ++
Sbjct: 121 LPHMKKQGWGR--------IINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALE-VAEH 171

Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-----------MAAYKFGEKWDIAMAA 240
            I VN I PG +  T  V K   ++ +++                   +F    ++A  A
Sbjct: 172 GITVNAICPGYV-RTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETA 230

Query: 241 LYLASDAAV 249
           LYLASDAA 
Sbjct: 231 LYLASDAAA 239

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  111 bits (279), Expect = 1e-29
 Identities = 69/243 (28%), Positives = 106/243 (43%), Gaps = 19/243 (7%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLEGDV 70
           KVA++TGG SGIG   +  L K GA +AI+ R +     A A L ++     A  ++ DV
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENP--GAAAELQAINPKVKATFVQCDV 58

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGN---FLVPAEDLSPNGFRTVIEIDSVGTFIM 127
              E      +  I  FG++DIL+N A        + A  L P  +   I+++  G    
Sbjct: 59  TSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPP-WEKTIDVNLTGVINT 117

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
            + AL Y+ K   G      GG+I+NI +             SA+K  V   TRSLA   
Sbjct: 118 TYLALHYMDKNKGG-----KGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLL 172

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
                +RVN I PG   +T  +      ++ +K  + + +        +A A +YL  D 
Sbjct: 173 EYKTGVRVNAICPGFT-NTPLL-----PDLVAKEAEMLPSAPTQSPEVVAKAIVYLIEDD 226

Query: 248 AVH 250
             +
Sbjct: 227 EKN 229

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  110 bits (277), Expect = 2e-29
 Identities = 70/242 (28%), Positives = 104/242 (42%), Gaps = 18/242 (7%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +V L+TG   G+G  I+    + GA + +   R T    AVAA    G  AI ++ DVR 
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAA--EAGERAIAIQADVRD 58

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLV------PAEDLSPNGFRTVIEIDSVGTFI 126
           R+    ++E   NHFG +D +VN A  +F          + +    ++  +E    G   
Sbjct: 59  RDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALN 118

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +    L   K+ G G+        +INI   L           + AKAA+   TR++A E
Sbjct: 119 LLQAVLPDFKERGSGR--------VINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKE 170

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
            G  Y I VN ++ G +K T   S   P+E+           K     DIA A L+ AS 
Sbjct: 171 LG-PYGITVNMVSGGLLKVT-DASAATPKEVFDAIAQTTPLGKVTTPQDIADAVLFFASP 228

Query: 247 AA 248
            A
Sbjct: 229 WA 230

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 3e-29
 Identities = 83/256 (32%), Positives = 115/256 (44%), Gaps = 26/256 (10%)

Query: 2   ESPF-KG-DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM----GRRKTVLRSAVAA 55
           E+P  KG   LKGKVAL+TGG SGIG  +++   K GA IAI+           +  V  
Sbjct: 34  EAPNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK 93

Query: 56  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNG 112
               G+  + + GDV         VE T+   G+LDILVN AA  F  P    ED++   
Sbjct: 94  ---EGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAA--FQYPQQSLEDITAEQ 148

Query: 113 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172
                + +    F M   AL +LK           G  IIN  +   Y      I  SA 
Sbjct: 149 LDKTFKTNIYSYFHMTKAALPHLK----------QGSAIINTGSITGYEGNETLIDYSAT 198

Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
           K A+ + TRSLA        IRVN +APGPI      S    E++    ++     + G+
Sbjct: 199 KGAIHAFTRSLAQSLVQK-GIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSN-TPMQRPGQ 256

Query: 233 KWDIAMAALYLASDAA 248
             ++A A ++LAS  +
Sbjct: 257 PEELAPAYVFLASPDS 272

Length = 290

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  110 bits (277), Expect = 3e-29
 Identities = 74/239 (30%), Positives = 106/239 (44%), Gaps = 9/239 (3%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+VAL+TG   G+GFEI+  L   GA + + GR    L +AVAAL + G  A  L  D
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFD 68

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   E             G+LDILVN        P  +L     R ++E D V   ++  
Sbjct: 69  IADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSR 128

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A + +K+ G         G II I++     A        AAK  +  + R+LA E+G 
Sbjct: 129 LAAQRMKRQG--------YGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGP 180

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            + I  N IAPG        +  A   +           ++G   +IA AA++LAS AA
Sbjct: 181 -HGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAA 238

Length = 256

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  110 bits (276), Expect = 4e-29
 Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 20/243 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK KV ++TGG  G+G  ++  L + GA +A++   +  L  AVA   +LG    G   +
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAED------LSPNGFRTVIEID 120
           V   ED           FG+L+ L+N A       LV A+D      +S   F++VI+++
Sbjct: 63  VTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVN 122

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
             G F+   EA   + + G         G+IINIS+         Q + SA+KA V ++T
Sbjct: 123 LTGVFLCGREAAAKMIESGS-------KGVIINISSIARA-GNMGQTNYSASKAGVAAMT 174

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
            + A E    Y IRV  IAPG I+ T   + + P E   +    +   + GE  +IA   
Sbjct: 175 VTWAKELAR-YGIRVAAIAPGVIE-TEMTAAMKP-EALERLEKMIPVGRLGEPEEIAHTV 231

Query: 241 LYL 243
            ++
Sbjct: 232 RFI 234

Length = 253

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 4e-28
 Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 37/249 (14%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+V L+TGG  GIG  I+      GA + + GRR        A     G PA     D
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR--------APETVDGRPAEFHAAD 55

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           VR  +    +V++ +   G+LD+LVN A G+    A + SP     ++E++ +   ++  
Sbjct: 56  VRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQ 115

Query: 130 EALKYLKKGGRGQASSSSGGIIINISA---------TLHYTATWYQIHVSAAKAAVDSIT 180
            A   +++          GG I+NI +         T  Y          AAKA + ++T
Sbjct: 116 AANAVMQQ-------QPGGGSIVNIGSVSGRRPSPGTAAY---------GAAKAGLLNLT 159

Query: 181 RSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
           RSLA+EW     +RVN +  G ++ + + +     E I + A   +   +     DIA A
Sbjct: 160 RSLAVEWAPK--VRVNAVVVGLVRTEQSELHYGDAEGIAAVA-ATVPLGRLATPADIAWA 216

Query: 240 ALYLASDAA 248
            L+LASD A
Sbjct: 217 CLFLASDLA 225

Length = 252

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  106 bits (267), Expect = 7e-28
 Identities = 62/247 (25%), Positives = 100/247 (40%), Gaps = 18/247 (7%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDV 70
            KVA++TG   GIG  I+ +L   G  I +     +   +S +  +   G  A+ +  DV
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
             ++D   +++  +  FG  D++VN A    + P   ++    + V  ++  G       
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQA 121

Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
           A +  KK G        GG IIN S+             SA+K AV  +T++ A E    
Sbjct: 122 AARQFKKLGH-------GGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELA-P 173

Query: 191 YAIRVNGIAPGPIKDT------AGVSKLA--PEEIRSKATDYMAAYK-FGEKWDIAMAAL 241
             I VN  APG +K          V ++A  PE                 E  D+A    
Sbjct: 174 KGITVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVS 233

Query: 242 YLASDAA 248
           +LAS+ +
Sbjct: 234 FLASEDS 240

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  106 bits (267), Expect = 9e-28
 Identities = 78/258 (30%), Positives = 117/258 (45%), Gaps = 40/258 (15%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVALLTG  SGIG  ++ +    GA + I   +      A  A   +G  AI +  D
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIK---PARARLAALEIGPAAIAVSLD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V +++   R+V + +  FG +DIL N AA   + P  D+S + +  +  ++  G F +  
Sbjct: 61  VTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQ 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISA---------TLHYTATWYQIHVSAAKAAVDSIT 180
              +++ + GR       GG IIN+++           HY AT         KAAV S T
Sbjct: 121 AVARHMVEQGR-------GGKIINMASQAGRRGEALVSHYCAT---------KAAVISYT 164

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDT----------AGVSKLAPEEIRSKATDYMAAYKF 230
           +S AL     + I VN IAPG + DT          A      P E +    + +   + 
Sbjct: 165 QSAALAL-IRHGINVNAIAPGVV-DTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRM 222

Query: 231 GEKWDIAMAALYLASDAA 248
           G   D+   AL+LAS  A
Sbjct: 223 GVPDDLTGMALFLASADA 240

Length = 257

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  106 bits (267), Expect = 9e-28
 Identities = 60/196 (30%), Positives = 89/196 (45%), Gaps = 20/196 (10%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           KV L+TG  SGIG  ++L L   G   IA   R    L S    L+        LE DV 
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATA-RNPDKLESLGELLND---NLEVLELDVT 56

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
             E     V+  I  FG++D+LVN A      P E+ S    R + E++  G   +    
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE---WG 188
           L  ++K           G I+N+S+      T +     A+KAA+++++ SL LE   +G
Sbjct: 117 LPLMRK--------QGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFG 168

Query: 189 TDYAIRVNGIAPGPIK 204
               I+V  I PGP++
Sbjct: 169 ----IKVTIIEPGPVR 180

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  105 bits (265), Expect = 1e-27
 Identities = 69/241 (28%), Positives = 104/241 (43%), Gaps = 11/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
           L G+ AL+TG   GIG  I+ +    GA + I+ R    L  A   L          GL 
Sbjct: 7   LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLA 66

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            DV   ED   +++   +H+  L ILVN A GN    A D + + +R + E +    F +
Sbjct: 67  ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFEL 126

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
              A   LK+         +   I+NI +    T           KAA+  +TR+LA+EW
Sbjct: 127 SRYAHPLLKQ--------HASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEW 178

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
             D  IRVN +AP  I+       L+  +   +  +     + GE  ++A A  +L   A
Sbjct: 179 AED-GIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPA 237

Query: 248 A 248
           A
Sbjct: 238 A 238

Length = 257

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 3e-27
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 12/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVA++TGG +G+G   ++ L K GA I I+    T        +   G     ++ D
Sbjct: 13  LDGKVAIVTGGNTGLGQGYAVALAKAGADI-IITTHGTNWDETRRLIEKEGRKVTFVQVD 71

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           + K E A +VV+  +  FGK+DILVN A      P  +     +  V++I+    + +  
Sbjct: 72  LTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQ 131

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              K + K G G+        IINI++ L +    +    +A+K  V  +T++ A E   
Sbjct: 132 AVAKVMAKQGSGK--------IINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELA- 182

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDAA 248
            Y I+VN IAPG IK TA  + +  ++ R+      + A ++GE  D+  AA++LAS A+
Sbjct: 183 AYNIQVNAIAPGYIK-TANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRAS 241

Length = 258

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  104 bits (260), Expect = 8e-27
 Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 23/227 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT------------VLRSAVAALH 57
           L GKVA +TG   GIG  I+L+L K GA + +  +  +             +      + 
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 58  SLGIPAIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
           + G  A+ +  DVR  ED VR +VE+T++ FG+LDILVN A   +L   ED     F  +
Sbjct: 61  AAGGQALPIVVDVRD-EDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLM 119

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
             ++  GT+++   AL ++ K G+G         I+NIS  L        +  +A KA +
Sbjct: 120 QRVNLRGTYLLSQAALPHMVKAGQGH--------ILNISPPLSLRPARGDVAYAAGKAGM 171

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 223
             +T  LA E    + I VN + P    +T   ++L+     ++A  
Sbjct: 172 SRLTLGLAAELR-RHGIAVNSLWPSTAIETPAATELSGGSDPARARS 217

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  108 bits (271), Expect = 1e-26
 Identities = 75/260 (28%), Positives = 109/260 (41%), Gaps = 35/260 (13%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVAL+TG   GIG   + +L   GA + +    +    +A A L      A+G+  D
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-RALGVACD 478

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
           V          E     FG +DI+V+  AG  +  P E+ S   +R   ++++ G F++ 
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVS-NAGIAISGPIEETSDEDWRRSFDVNATGHFLVA 537

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHY---TATWYQIHVSAAKAAVDSITRSLAL 185
            EA++ +K  G G      G I+   S            Y     AAKAA   + R LAL
Sbjct: 538 REAVRIMKAQGLG------GSIVFIASKNAVNPGPNFGAY----GAAKAAELHLVRQLAL 587

Query: 186 EWGTDYAIRVNGIAP------------GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
           E G D  IRVNG+ P              I+  A    L+ EE+      Y A      +
Sbjct: 588 ELGPD-GIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEEL---EEFYRARNLLKRE 643

Query: 234 W---DIAMAALYLASDAAVH 250
               D+A A ++LAS     
Sbjct: 644 VTPEDVAEAVVFLASGLLSK 663

Length = 681

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 1e-26
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 13/242 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVA++TG  SGIG   +    + GA + +  RR+  L   VA + + G  A+ L GD
Sbjct: 4   LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGD 63

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           VR    A  +V   +  FG LDI  N A     + P  ++S  G+R  +  +    F+  
Sbjct: 64  VRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGA 123

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA-KAAVDSITRSLALEW 187
              +  +   G        GG +I  S  + +TA +  +   AA KA +  +T+ LA E+
Sbjct: 124 KHQIPAMLARG--------GGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEY 175

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
           G    IRVN + PG   DT     +    E  +      A  +  +  +IA AAL+LASD
Sbjct: 176 GAQ-GIRVNALLPGGT-DTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASD 233

Query: 247 AA 248
           AA
Sbjct: 234 AA 235

Length = 254

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  103 bits (258), Expect = 2e-26
 Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 16/243 (6%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEGD 69
             KV ++TGG  GIG  I     ++GA +    R +   ++  + L+  G      +  D
Sbjct: 8   ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCD 67

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V K ED   ++  T+  FG++D LVN A  +      ++ S   FR ++ ++ +  F+  
Sbjct: 68  VTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLAS 127

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             AL +L+K         S G IIN+S+ +            A K A+ ++T++LA++  
Sbjct: 128 KYALPHLRK---------SQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVD-E 177

Query: 189 TDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
           + Y +RVN I+PG    P+ +              +        + G + +  +AAL+LA
Sbjct: 178 SRYGVRVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLA 237

Query: 245 SDA 247
           ++A
Sbjct: 238 AEA 240

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 4e-26
 Identities = 72/241 (29%), Positives = 105/241 (43%), Gaps = 13/241 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L  +VA++TG G G+G  I+L   + GA + I  R ++ L      + + G  A  +  D
Sbjct: 8   LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAAD 67

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   E    +    +  FG+LDI+VN   G    P    S          +      +  
Sbjct: 68  LAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTV 127

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A+  + +        S GG +INIS+T+   A         AKAA+   TR  AL    
Sbjct: 128 AAVPLMLE-------HSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAAL---- 176

Query: 190 DYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
           D    IRVN IAPG I  +A     A +E+R+         + G+  DIA AA+YLAS A
Sbjct: 177 DLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPA 236

Query: 248 A 248
            
Sbjct: 237 G 237

Length = 263

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  101 bits (255), Expect = 4e-26
 Identities = 78/245 (31%), Positives = 112/245 (45%), Gaps = 22/245 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GK AL+TGG SGIG E + Q    GA +AI GR    L +A A    LG  A+ +  D
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAE---LGESALVIRAD 60

Query: 70  VRKREDAVRVVESTINHFGKLDIL-VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
                    + ++    FG+LD + +NA    F  P ED     F      +  G + + 
Sbjct: 61  AGDVAAQKALAQALAEAFGRLDAVFINAGVAKFA-PLEDWDEAMFDRSFNTNVKGPYFLI 119

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
              L  L       AS     I++N S   H       ++ +A+KAA+ S+ ++L+ E  
Sbjct: 120 QALLPLLANP----AS-----IVLNGSINAHIGMPNSSVY-AASKAALLSLAKTLSGEL- 168

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAY----KFGEKWDIAMAALYL 243
               IRVN ++PGP+  T    KL  PE         + A     +FG   +IA A LYL
Sbjct: 169 LPRGIRVNAVSPGPV-QTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYL 227

Query: 244 ASDAA 248
           ASD +
Sbjct: 228 ASDES 232

Length = 249

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 4e-26
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 12/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK+AL+TG   GIG  I+  L + GA + +  R+    ++   A+ + G  A  L   
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           + + E    +        G+LDILVN AA N +     D     F+  ++++  G F M 
Sbjct: 66  IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMS 125

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA K +K+ G        GG I+N+++    +   +Q   S  KAAV S+T++ A E  
Sbjct: 126 VEAGKLMKEQG--------GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA 177

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
               IRVN + PG + DT   S L   + I  +A  ++   +  E  ++A A LYLASDA
Sbjct: 178 PF-GIRVNALLPG-LTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDA 235

Query: 248 A 248
           +
Sbjct: 236 S 236

Length = 252

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 5e-26
 Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 16/243 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL----GIPAIG 65
           L  +  L+TGG  G+G  I+++L   GA + ++       R+   A+ +     G  A+G
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           L  DVR        +++ +  FG+LDILVN A         +LS   +  VI+++  G F
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFF 123

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            +   AL  + +  R       GG I+NI++         Q++ +A+KA +  +T++LA 
Sbjct: 124 NVTQAALPPMIRARR-------GGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLAN 176

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           E      I VN +APG I +T      AP E      + +   + GE  ++A    +L S
Sbjct: 177 ELA-PRGITVNAVAPGAI-NTPMADNAAPTE---HLLNPVPVQRLGEPDEVAALVAFLVS 231

Query: 246 DAA 248
           DAA
Sbjct: 232 DAA 234

Length = 249

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  101 bits (254), Expect = 7e-26
 Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 28/252 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
           L GKVAL+TGG  G+G  I+    + GAA + I GR      +  A L +LG  A+ ++ 
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGT 124
           D+   ED  RVV +    FG+LD LVNAA     G  L    D SP  F     ++    
Sbjct: 64  DLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTIL----DTSPELFDRHFAVNVRAP 119

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           F +  EA+K +++  R        G I+NI +   +    +     A+K A+ ++TR+ A
Sbjct: 120 FFLMQEAIKLMRR--RKAE-----GTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAA 172

Query: 185 --LEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDI 236
             L       IRVNG+  G +  T G  ++      AP++   KA       +  +  ++
Sbjct: 173 YALLR---NRIRVNGLNIGWM-ATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEV 228

Query: 237 AMAALYLASDAA 248
           A A  +L SD +
Sbjct: 229 ARAVAFLLSDES 240

Length = 260

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  100 bits (252), Expect = 1e-25
 Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 29/252 (11%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGD 69
           + K+ L+TG    IG      L   GA + +       L      L +L     I LE D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---PAEDLSPNGFRTVIEIDSVGTFI 126
           +  +E    ++ES +  FG++DIL+N A  +  V     E+     +  V+ ++  G F+
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATL--------HYTATWYQ--IHVSAAKAAV 176
                +K  KK           G IINI++           Y  T     +  S  KA +
Sbjct: 121 CSQAFIKLFKK--------QGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGI 172

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
             +T+ LA  +  D  IRVN I+PG I +        P E   K T      +     D+
Sbjct: 173 IHLTKYLAKYYA-DTGIRVNAISPGGILNN------QPSEFLEKYTKKCPLKRMLNPEDL 225

Query: 237 AMAALYLASDAA 248
             A ++L SDA+
Sbjct: 226 RGAIIFLLSDAS 237

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  100 bits (252), Expect = 1e-25
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 10/196 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEG 68
           L+GKV ++TG  SGIG E++  L + GA + +  RR+  L    +    LG P    +  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+   EDA +VVE  +  FG LDIL+N A  +      D S +  R ++E++  G   + 
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALT 120

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             AL +L +  +G         I+ +S+        ++   +A+K A+     SL  E  
Sbjct: 121 KAALPHLIERSQGS--------IVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAEL- 171

Query: 189 TDYAIRVNGIAPGPIK 204
           ++  I V  + PG I 
Sbjct: 172 SEPNISVTVVCPGLID 187

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 2e-25
 Identities = 73/249 (29%), Positives = 108/249 (43%), Gaps = 23/249 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA--IGLE 67
           L GKVAL+TG   GIG  I+    + GAA+A+      +   A AA+      A  + + 
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFI 126
            DV         V +    FG LD+LVN A  N F  P   ++   +R    +D  G + 
Sbjct: 65  ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLA-MTDEDWRRCFAVDLDGAWN 123

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
            C   L  + + GRG         I+NI++T  +           AK  +  +TR+L +E
Sbjct: 124 GCRAVLPGMVERGRGS--------IVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIE 175

Query: 187 WGTDYA---IRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMA 239
               YA   +RVN IAPG I+             P   R++        + G   ++AM 
Sbjct: 176 ----YAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMT 231

Query: 240 ALYLASDAA 248
           A++LASD A
Sbjct: 232 AVFLASDEA 240

Length = 260

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 98.9 bits (247), Expect = 7e-25
 Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 22/250 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGKV +++G G G+G  ++++  + GA + +  R    L    A +  LG  A+ +  D
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +   +    +V   +  FG++D LVN A     + P  D     +R VIE++ +GT  + 
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT 122

Query: 129 HEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
                 L +         SGG I+ I S  L ++   Y  +   AK A+ + ++SLA E 
Sbjct: 123 QAFTPALAE---------SGGSIVMINSMVLRHSQPKYGAY-KMAKGALLAASQSLATEL 172

Query: 188 GTDYAIRVNGIAPG-----PIKD----TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
           G    IRVN +APG     P+K      AG   +  E+I ++        +     ++A 
Sbjct: 173 G-PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVAS 231

Query: 239 AALYLASDAA 248
           A L+LASD A
Sbjct: 232 AVLFLASDLA 241

Length = 258

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 97.6 bits (243), Expect = 1e-24
 Identities = 67/239 (28%), Positives = 99/239 (41%), Gaps = 21/239 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKV  +TGG  G+G   +  L   GA +A++GR    L   +  + +  +   G+  D
Sbjct: 5   LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGI--D 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   + A R V+     FG+LD LVN A         D   + +  +  ++   T     
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASK 122

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            AL  L        ++S GG I+NI A     A       +AAKA V  +T +LA E   
Sbjct: 123 AALPAL--------TASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL- 173

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           D  I VN + P  I DT       P+   S         ++     IA    +L SD A
Sbjct: 174 DRGITVNAVLPSII-DTPPNRADMPDADFS---------RWVTPEQIAAVIAFLLSDEA 222

Length = 239

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 97.9 bits (244), Expect = 2e-24
 Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 18/243 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              KVA++TG   GIG   +  L + GA++ +              + + G  AI ++ D
Sbjct: 4   FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVD 63

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V   + A  + ++T++ FG +D LVN AA   G  L     +  + ++  + ++  G  +
Sbjct: 64  VSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALV 123

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLAL 185
                 K++ K G        GG I+N S+    TA W Y      AK  ++ +T+ LA 
Sbjct: 124 CTRAVYKHMAKRG--------GGAIVNQSS----TAAWLYSNFYGLAKVGLNGLTQQLAR 171

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           E G    IRVN IAPGPI DT     + P+E  +     +   + G   D+    L+L S
Sbjct: 172 ELGG-MNIRVNAIAPGPI-DTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLS 229

Query: 246 DAA 248
           D A
Sbjct: 230 DEA 232

Length = 250

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 97.2 bits (242), Expect = 2e-24
 Identities = 82/258 (31%), Positives = 113/258 (43%), Gaps = 25/258 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG  SGIG   +  L   GAA+AI  RR   L +    L + G  A+ LE D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +     VE T+   G+LDILVN A    L P ED     +  +I+ + +G     H
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTH 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            AL +            + G I+NIS+     A       +A K  V++ +  L  E  T
Sbjct: 121 AALPHHL--------LRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEV-T 171

Query: 190 DYAIRVNGIAPG----PIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           +  +RV  I PG     ++D  T  ++K A EE  S      A        DIA A  Y 
Sbjct: 172 ERGVRVVVIEPGTVDTELRDHITHTITKEAYEERISTIRKLQAE-------DIAAAVRYA 224

Query: 244 ASD---AAVHRDLIHLLD 258
            +      V+  LI   D
Sbjct: 225 VTAPHHVTVNEILIRPTD 242

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 97.6 bits (243), Expect = 2e-24
 Identities = 72/245 (29%), Positives = 112/245 (45%), Gaps = 18/245 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVA++TG G+GIG   + +L + GA + +         +A A +  +   A+ L  D
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADID---GGAAQAVVAQIAGGALALRVD 57

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMC 128
           V   +    + E  +  FG LD+LVN A    L PA  D     +   + I+  GTF+ C
Sbjct: 58  VTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCC 117

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A   +         +  GG I+N+S+    +         A+KAA+ ++TR+LA E  
Sbjct: 118 RHAAPRMI--------ARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELR 169

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-----KFGEKWDIAMAALYL 243
               IR N +APG I     ++KLA  E       +         + G   D+A A ++L
Sbjct: 170 HA-GIRCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFL 228

Query: 244 ASDAA 248
            SD A
Sbjct: 229 LSDDA 233

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 97.6 bits (243), Expect = 3e-24
 Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 29/259 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------------LRSAVAAL 56
           L+GKVA +TG   G G   +++L   GA I  +     +             L      +
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 57  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
            +LG   +  + DVR   +   VVE  +  FG+LD++V  A       + +LS   + TV
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTV 120

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
           ++I+  G +  C   + ++ + G       +GG II  S+     A     H +AAK  +
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERG-------NGGSIIITSSVAGLKALPGLAHYAAAKHGL 173

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK------- 229
             +T++LA E   +Y IRVN I P  + DT  ++  A  E   K  +   A+        
Sbjct: 174 VGLTKTLANELA-EYGIRVNSIHPYSV-DTPMIAPEAMREAFLKYPEAARAFMPALPVSG 231

Query: 230 FGEKWDIAMAALYLASDAA 248
           F    D+A A L+LASD +
Sbjct: 232 FVPPEDVADAVLWLASDES 250

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 97.3 bits (242), Expect = 3e-24
 Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 12/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVA++TG  +G+G  ++L L + G  I  +G         +  + +LG   + L  D
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDI--VGINIVEPTETIEQVTALGRRFLSLTAD 65

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +RK +    ++E  +  FG +DILVN A       A + S   +  V+ ++    F M  
Sbjct: 66  LRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQ 125

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A K+    G       +GG IINI++ L +         +A+K+ V  +TR +A EW  
Sbjct: 126 AAAKHFIAQG-------NGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAK 178

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDAA 248
            + I VN IAPG +  T    +L  +E RS    D + A ++G   D+    ++LAS A+
Sbjct: 179 -HNINVNAIAPGYMA-TNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSAS 236

Length = 253

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  100 bits (251), Expect = 3e-24
 Identities = 70/246 (28%), Positives = 108/246 (43%), Gaps = 24/246 (9%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
           + +V L+TG   GIG     +  + G  + +  R    +  A     SLG     L  DV
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRN---VERARERADSLGPDHHALAMDV 60

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
                     E     FG++D+LVN A      +    D +   F  +  I+  G +++ 
Sbjct: 61  SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EAL+ + + G G A       I+N+++     A   +   SA+KAAV S+TRSLA EW 
Sbjct: 121 REALRLMIEQGHGAA-------IVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWA 173

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY------KFGEKWDIAMAALY 242
               IRVN + PG ++     +++  E  R+   D  A        + G   +IA A  +
Sbjct: 174 AK-GIRVNAVLPGYVR-----TQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFF 227

Query: 243 LASDAA 248
           LASD A
Sbjct: 228 LASDQA 233

Length = 520

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 95.9 bits (239), Expect = 1e-23
 Identities = 71/242 (29%), Positives = 121/242 (50%), Gaps = 12/242 (4%)

Query: 8   DILKGKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAI- 64
            +L GKV L+T   G+GIG   + +  + GA + I    +  L      L + LG+  + 
Sbjct: 13  GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVE 72

Query: 65  GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
            +  DV        ++++ +   G+LD+LVN A      P  D++ + +  V+++   GT
Sbjct: 73  AVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGT 132

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           F     AL+Y++   RG      GG+I+N ++ L + A   Q H +AAKA V ++TR  A
Sbjct: 133 FRATRAALRYMR--ARGH-----GGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSA 185

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
           LE   +Y +R+N +AP  I     ++K+   E+  +     A  +  E W++A    +LA
Sbjct: 186 LE-AAEYGVRINAVAPS-IAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLA 243

Query: 245 SD 246
           SD
Sbjct: 244 SD 245

Length = 262

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 95.5 bits (238), Expect = 1e-23
 Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 23/250 (9%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           GKVAL+TGG SGIG  I+ +L   GAA+ +      +    VA     G  A+G++ DV 
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEK-VAEAAQGGPRALGVQCDVT 59

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
                    E  +  FG LDI+V+ A      P  + S   +   ++I+  G F++  EA
Sbjct: 60  SEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREA 119

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWG 188
            + +K  G G      G I+ N S         A  Y    SAAKAA   + R LALE G
Sbjct: 120 FRIMKSQGIG------GNIVFNASKNAVAPGPNAAAY----SAAKAAEAHLARCLALEGG 169

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD-----YMAAYKFGEK---WDIAMAA 240
            +  IRVN + P  +   + + +      R+KA       Y        +    D+A A 
Sbjct: 170 -EDGIRVNTVNPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAV 228

Query: 241 LYLASDAAVH 250
           + +AS+    
Sbjct: 229 VAMASEDFGK 238

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 95.6 bits (238), Expect = 2e-23
 Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 14/197 (7%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
             KVAL+TG G GIGF I+ +L + G  +AI+   +   ++A   L   G  AI ++ DV
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADV 60

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI---M 127
             R+     V   ++ FG L+++VN A      P E ++   F  V  I+  G       
Sbjct: 61  SDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQA 120

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
             EA K L  GG+   ++S  G++ N    ++          S+ K AV  +T++ A + 
Sbjct: 121 AQEAFKKLGHGGKIINATSQAGVVGNPELAVY----------SSTKFAVRGLTQTAARDL 170

Query: 188 GTDYAIRVNGIAPGPIK 204
            ++  I VN  APG +K
Sbjct: 171 ASE-GITVNAYAPGIVK 186

Length = 256

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 95.4 bits (238), Expect = 5e-23
 Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           +  +V ++TG  +G+G   +    + GA + ++ R +  L +  A + + G  A+ +  D
Sbjct: 6   IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVAD 65

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   E      +      G +D  VN A      P ED++P  FR V E+  +G      
Sbjct: 66  VADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL 125

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
            AL++++   R        G II + + L Y +   Q    AAK A+   T SL  E
Sbjct: 126 AALRHMRPRDR--------GAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCE 174

Length = 334

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 94.2 bits (235), Expect = 5e-23
 Identities = 64/211 (30%), Positives = 91/211 (43%), Gaps = 22/211 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV---------LRSAVAALHSLG 60
           L GK   +TG   GIG  I+L+  + GA I I    KT          + +A   + + G
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAA--KTAEPHPKLPGTIHTAAEEIEAAG 61

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
             A+ L GDVR  +     V   +  FG +DI VN A+   L   ED     F  + +I+
Sbjct: 62  GQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQIN 121

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS--AAKAAVDS 178
             GTF++    L +LKK        S    I+ +S  L+    W+  H +   AK  +  
Sbjct: 122 VRGTFLVSQACLPHLKK--------SENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSL 173

Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209
            T  LA E+  D  I VN + P     TA V
Sbjct: 174 CTLGLAEEFR-DDGIAVNALWPRTTIATAAV 203

Length = 273

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 93.7 bits (233), Expect = 6e-23
 Identities = 72/245 (29%), Positives = 108/245 (44%), Gaps = 22/245 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIGLEG 68
           L  KVA++TG   GIG  I+ +L   G A+A+           + A + + G  AI ++ 
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV       R+ ++    FG++D+LVN A    L    D     F   I  +  G F++ 
Sbjct: 63  DVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVL 122

Query: 129 HEALKYLKKGGRGQASSSSGGIIINIS----ATLHYTATWYQIHVSAAKAAVDSITRSLA 184
            EA ++L +GGR          IIN+S    A        Y    +A+KAAV+ +   LA
Sbjct: 123 REAARHLGQGGR----------IINLSTSVIALPLPGYGPY----AASKAAVEGLVHVLA 168

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
            E      I VN +APGP+      +  + E+I   A       + G   +IA A  +LA
Sbjct: 169 NELRGR-GITVNAVAPGPVATELFFNGKSAEQIDQLA-GLAPLERLGTPEEIAAAVAFLA 226

Query: 245 S-DAA 248
             D A
Sbjct: 227 GPDGA 231

Length = 245

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 93.9 bits (234), Expect = 6e-23
 Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
            GKV ++TG   GIG  ++L+    GA + ++ R + V     A L + G  A+ L  D+
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADL 65

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
                A   + + +  FG++D+L+N   G  +  P E+         I      T   C 
Sbjct: 66  ETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCR 125

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             L ++   G        GG I+N+S+    T    ++  SAAK  V+++T SLA E+  
Sbjct: 126 AVLPHMLAQG--------GGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLAFEYA- 174

Query: 190 DYAIRVNGIAPG 201
           ++ IRVN +APG
Sbjct: 175 EHGIRVNAVAPG 186

Length = 260

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 92.7 bits (231), Expect = 7e-23
 Identities = 60/194 (30%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL-RSAVAALHSLGIPAIGLEGDVR 71
           KVAL+TG   GIGFEI  QL K G    I+  R     ++AV  L + G+     + DV 
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 72  KREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
                    +     +G LDILV NA            +    R  ++ +  GT  +   
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQA 120

Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
            L  LKK        S  G I+N+S+ L    + Y      +KAA++++TR LA E   +
Sbjct: 121 LLPLLKK--------SPAGRIVNVSSGLGSLTSAYG----VSKAALNALTRILAKEL-KE 167

Query: 191 YAIRVNGIAPGPIK 204
             I+VN   PG +K
Sbjct: 168 TGIKVNACCPGWVK 181

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 93.5 bits (233), Expect = 8e-23
 Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 19/197 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+VAL+TGGGSGIG  +  +    GA +A++ R    L +++       +  +  EGD
Sbjct: 4   LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKL-ASLRQRFGDHVLVV--EGD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPN----GFRTVIEIDSVGT 124
           V    D  R V+ T++ FGKLD  V NA   ++     D+        F  +  ++  G 
Sbjct: 61  VTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGY 120

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
            +    AL  LK  G        G +I  +S +  Y      ++  A+K AV  + R LA
Sbjct: 121 LLGAKAALPALKASG--------GSMIFTLSNSSFYPGGGGPLYT-ASKHAVVGLVRQLA 171

Query: 185 LEWGTDYAIRVNGIAPG 201
            E      IRVNG+APG
Sbjct: 172 YELAPK--IRVNGVAPG 186

Length = 263

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 92.1 bits (229), Expect = 2e-22
 Identities = 74/247 (29%), Positives = 111/247 (44%), Gaps = 18/247 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIG-LEG 68
           L GKVA++TGG SGIG   +    KHGA + I          AVAA   LG P I  +  
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDD-AGQAVAA--ELGDPDISFVHC 58

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           DV    D    V++ +  FG+LDI+ N A   G       + S   F  V++++  G F+
Sbjct: 59  DVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFL 118

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
               A + +    +G         I+++++             +A+K AV  +TRS A E
Sbjct: 119 GTKHAARVMIPAKKGS--------IVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATE 170

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG---EKWDIAMAALYL 243
            G ++ IRVN ++P  +      +    E+   +     AA   G      DIA A LYL
Sbjct: 171 LG-EHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYL 229

Query: 244 ASDAAVH 250
           ASD + +
Sbjct: 230 ASDDSRY 236

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 91.7 bits (228), Expect = 3e-22
 Identities = 76/256 (29%), Positives = 109/256 (42%), Gaps = 33/256 (12%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT----VLRSAVAALHSLGIPAIGL 66
           KGKVAL+TG  SGIG  I+  L   GA I + G         +R+ +AA H  G+  +  
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKH--GVKVLYH 58

Query: 67  EGDVRKR---EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             D+ K    ED V   +     FG +DILVN A    + P ED     +  +I ++   
Sbjct: 59  GADLSKPAAIEDMVAYAQRQ---FGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSA 115

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
            F     AL ++KK G G+        IINI++     A+  +    AAK  V  +T+ +
Sbjct: 116 VFHTTRLALPHMKKQGWGR--------IINIASVHGLVASANKSAYVAAKHGVVGLTKVV 167

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-----------KFGE 232
           ALE      +  N I PG +  T  V K      +        A            +F  
Sbjct: 168 ALE-TAGTGVTCNAICPGWV-LTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVT 225

Query: 233 KWDIAMAALYLASDAA 248
              +   A++LASDAA
Sbjct: 226 PEQLGDTAVFLASDAA 241

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 91.4 bits (227), Expect = 5e-22
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 10/242 (4%)

Query: 8   DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
           D L  KVAL+T    GIG  I+ +L + GA + +  R++  +  AVA L   G+   G  
Sbjct: 6   DPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTV 65

Query: 68  GDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
             V K ED  R+V + +N  G +DILV NAA   F     D +   +  +++++   T +
Sbjct: 66  CHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATAL 125

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           M    +  ++K G        GG ++ +S+   +         + +K A+  +T++LA E
Sbjct: 126 MTKAVVPEMEKRG--------GGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPE 177

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                 IRVN +APG IK +   +    + +     + +   + G+  D A    +L S+
Sbjct: 178 LAPR-NIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSE 236

Query: 247 AA 248
            A
Sbjct: 237 DA 238

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 91.1 bits (226), Expect = 8e-22
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK A++TG  SGIG EI+L+L + GAA+AI    +    +    ++  G  AIG+  D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +     ++     FG +DILV+ A    + P E+ S   ++ +  I   G F+   
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTK 124

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            ALK++ K  R       GG++I + +   + A+  +     AK  +  + R LA E G 
Sbjct: 125 AALKHMYKDDR-------GGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKE-GA 176

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEE 216
            + +R + + PG ++ T  V K  PE+
Sbjct: 177 KHNVRSHVVCPGFVR-TPLVDKQIPEQ 202

Length = 262

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 90.2 bits (224), Expect = 1e-21
 Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 20/244 (8%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           KV ++TG   GIG   +L   + G A+ +   R +    + V A+   G  A+ +  DV 
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRTVIEIDSVGTFIMC 128
              D +R+ E+     G+LD LVN A    L      E +       +   + VG+F+  
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAG--ILEAQMRLEQMDAARLTRIFATNVVGSFLCA 120

Query: 129 HEALKYL--KKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLAL 185
            EA+K +  + GGR       GG I+N+S+      +    I  +A+K A+D++T  LA 
Sbjct: 121 REAVKRMSTRHGGR-------GGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAK 173

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAALYLA 244
           E   +  IRVN + PG I      S   P  + R KA   M   + G   ++A A L+L 
Sbjct: 174 EVAAE-GIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMG--RGGTAEEVARAILWLL 230

Query: 245 SDAA 248
           SD A
Sbjct: 231 SDEA 234

Length = 248

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 89.7 bits (223), Expect = 1e-21
 Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 17/195 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GK AL+TG G GIG  +++ L K G  + ++ R +  L++    + + G+  +    D
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATAD 64

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           V   E+    +E   N  G +DIL+N A     G FL    +L P  +  +I+++ +G +
Sbjct: 65  VSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFL----ELDPAEWEKIIQVNLMGVY 120

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
                 L  + +   G         IINIS+T            SA+K  V  +T SL  
Sbjct: 121 YATRAVLPSMIERQSGD--------IINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQ 172

Query: 186 EWGTDYAIRVNGIAP 200
           E    + IRV  + P
Sbjct: 173 EV-RKHNIRVTALTP 186

Length = 239

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 92.6 bits (230), Expect = 2e-21
 Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 16/239 (6%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
            +V  +TGG  GIG  ++ +    G  + I+ R       A     +LG   + ++ D+ 
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA---EGAKKLAEALGDEHLSVQADIT 325

Query: 72  KREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
                          +G+LD+LVN A       P+ + S   F  V +++  G F     
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARA 385

Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
           A +            S GG+I+N+ +     A   +    A+KAAV  ++RSLA EW   
Sbjct: 386 AAR----------LMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAP- 434

Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAA 248
             IRVN +APG I+  A ++  A       +        + G+  ++A A  +LAS AA
Sbjct: 435 AGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAA 493

Length = 520

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 89.7 bits (223), Expect = 2e-21
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           GKV ++TG   GIG  ++++L + GA + +  R +T L S    L   G  A+ +  DV 
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS-PNGFRTVIEIDSVGTFIMCHE 130
             E   R++E+ +  FG +DILVN A        ++L+  + F  V+ ++ +G     H 
Sbjct: 61  DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHA 120

Query: 131 ALKYLKKGGRGQ--ASSSSGGII 151
           AL +LK   RGQ    SS  G+ 
Sbjct: 121 ALPHLKA-SRGQIVVVSSLAGLT 142

Length = 263

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 89.4 bits (222), Expect = 2e-21
 Identities = 67/239 (28%), Positives = 101/239 (42%), Gaps = 21/239 (8%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGD 69
           GK  L+TG  SGIG   ++ L + GA +    R         AAL  L        L  D
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAAR-------NAAALDRLAGETGCEPLRLD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   + A+R   +     G  D LVN A    L  A D++  GF  V+ +++ G  ++  
Sbjct: 62  V-GDDAAIRAALAA---AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVAR 117

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
                     R   ++  GG I+N+S+          +   A+KAA+D+ITR L +E G 
Sbjct: 118 HV-------ARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELG- 169

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            + IRVN + P            +  +        +   +F E  D+A   L+L SDAA
Sbjct: 170 PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAA 228

Length = 245

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 89.7 bits (223), Expect = 2e-21
 Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 22/217 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKG+VAL+TGGGSG+G  +  +    GA +A++ R    + + + A    G   +G+EGD
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKV-AELRADF--GDAVVGVEGD 58

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFL-----VPAEDLSPNGFRTVIEIDSVG 123
           VR   D  R V   +  FGKLD  + NA   ++      +P E L    F  +  I+  G
Sbjct: 59  VRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDE-AFDELFHINVKG 117

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
             +    AL  L          + G +I  +S    Y      ++  A+K AV  + + L
Sbjct: 118 YILGAKAALPALYA--------TEGSVIFTVSNAGFYPGGGGPLYT-ASKHAVVGLVKQL 168

Query: 184 ALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEIRS 219
           A E      IRVNG+APG +  D  G + L   E   
Sbjct: 169 AYELAPH--IRVNGVAPGGMVTDLRGPASLGQGETSI 203

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 89.0 bits (221), Expect = 3e-21
 Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 17/243 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK  L+TG   GIGF ++  L ++GA I I          AVA L   GI A     +
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFN 66

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  +++    +E      G +D+L+N A      P  +     +  VI ++    F++  
Sbjct: 67  VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQ 126

Query: 130 EALKYLKKGGRGQASSSSGGIIINI----SATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
              +Y+ K   G+        IINI    S     T T Y    +A+K AV  +TR + +
Sbjct: 127 AVARYMVKRQAGK--------IINICSMQSELGRDTITPY----AASKGAVKMLTRGMCV 174

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           E    + I+VNGIAPG  K     + +  E   +       A ++G+  ++  AA++L+S
Sbjct: 175 ELAR-HNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSS 233

Query: 246 DAA 248
            A+
Sbjct: 234 KAS 236

Length = 254

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 89.0 bits (221), Expect = 3e-21
 Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 13/242 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             GKVAL+TGG +GIG   +L   + GA + +  R        VA +   G  A+ +  D
Sbjct: 5   FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACD 64

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI-M 127
           V +  +   +VE TI  +G+LD    NA          + S   F  ++ ++  G ++ M
Sbjct: 65  VTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCM 124

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
            ++    L +G         GG I+N ++     A       +A+K AV  +T+S A+E+
Sbjct: 125 KYQIPLMLAQG---------GGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEY 175

Query: 188 GTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                IRVN + P  I  D    +  A       A       + G+  ++A A LYL SD
Sbjct: 176 AKK-GIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSD 234

Query: 247 AA 248
            A
Sbjct: 235 GA 236

Length = 253

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 89.2 bits (222), Expect = 3e-21
 Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 16/215 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEG 68
           +KGK AL+TG  SGIG E++ QL + G  + ++ RR+  L +    L    G+    +  
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+   E   R+ +      G +D+LVN A      P  +LS +    +I+++ +    + 
Sbjct: 64  DLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLT 123

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
              L  + + G G         IINI +      T Y    SA KA V S + +L  E  
Sbjct: 124 KAVLPGMVERGAGH--------IINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELK 175

Query: 189 TDYAIRVNGIAPGPIK------DTAGVSKLAPEEI 217
               ++V  + PGP +        + V  L+P E+
Sbjct: 176 -GTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGEL 209

Length = 265

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 88.9 bits (221), Expect = 4e-21
 Identities = 67/197 (34%), Positives = 90/197 (45%), Gaps = 24/197 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK KV ++TGG SGIG  ISL+L + GA   I GR       A   L +L   A  ++ D
Sbjct: 5   LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFA-EELRALQPRAEFVQVD 63

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +         VE T+  FG++D LVN A  N  V  E      F   +E + +  ++M H
Sbjct: 64  LTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEA-GREAFVASLERNLIHYYVMAH 122

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS---AAKAAVDSITRSLALE 186
             L +LK          S G I+NIS+    TA   Q   S   AAK A  ++TR    E
Sbjct: 123 YCLPHLKA---------SRGAIVNISSK---TALTGQGGTSGYAAAKGAQLALTR----E 166

Query: 187 WGTD---YAIRVNGIAP 200
           W        +RVN + P
Sbjct: 167 WAVALAKDGVRVNAVIP 183

Length = 258

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 88.4 bits (220), Expect = 5e-21
 Identities = 64/242 (26%), Positives = 95/242 (39%), Gaps = 38/242 (15%)

Query: 22  SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81
           + I + I+    + GA + +      +   AV  L    +PA  +  DV   ED   + E
Sbjct: 6   NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKE-LPADVIPLDVTSDEDIDELFE 64

Query: 82  STINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLK 136
                 GK+D LV++ A         P  D S  GF   ++I S  +FI +   A   + 
Sbjct: 65  KVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDI-SAYSFISLAKAAKPLMN 123

Query: 137 KGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 196
           +GG   A S                       +  AKAA++S+ R LA E G    IRVN
Sbjct: 124 EGGSIVALSYIAAE----------RVFPGYGGMGVAKAALESLARYLAYELG-RKGIRVN 172

Query: 197 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----------DIAMAALYLASD 246
            I+ GP K TAG          S    +    ++ E+           ++A AA +L SD
Sbjct: 173 TISAGPTKTTAG----------SGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLSD 222

Query: 247 AA 248
            A
Sbjct: 223 LA 224

Length = 239

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 88.7 bits (220), Expect = 5e-21
 Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 17/245 (6%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KVAL+TGG  GIG  I+ +L K G A+A+    +   +     ++  G  A+  + DV  
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
           ++     ++     FG  D++VN A    + P  +++    + V  ++  G       A 
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           +  KK G        GG IIN ++   +         S+ K AV  +T++ A E      
Sbjct: 121 RQFKKQG-------HGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKG- 172

Query: 193 IRVNGIAPGPIKDT------AGVSKLAPEEIRSKATDYMAAYKFG---EKWDIAMAALYL 243
           I VN   PG +K           S++A + I     ++ +    G   E  D+A    +L
Sbjct: 173 ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFL 232

Query: 244 ASDAA 248
           AS+ +
Sbjct: 233 ASEDS 237

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 88.3 bits (219), Expect = 6e-21
 Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 9/239 (3%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+ AL+TG   GIG+ ++  L + GA + + GR    L +A  +L   G+ A  L  D
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +     +++     G +DILVN A   F  P ED   + F  ++  +    F +  
Sbjct: 68  VTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQ 127

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              +++   G G+        IINI++     A       +A K AV ++T+ +A +W  
Sbjct: 128 AVARHMIARGAGK--------IINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAK 179

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            + ++ N IAPG        + +A  E  +       A ++G+  ++  A ++LASDA+
Sbjct: 180 -HGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDAS 237

Length = 255

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 88.3 bits (219), Expect = 7e-21
 Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 11/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           + GK+ L+TGG  GIG  I+    + GA + I  R+      A   L + G   I +  D
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIPAD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   E    +V        +LD+LVN A   +  P E    +G+  V++I+    F +  
Sbjct: 63  LSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQ 122

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEWG 188
             L  L+     +  +     +INI +      +  + +   A+KAAV  +TR LA E  
Sbjct: 123 ALLPLLRAAATAENPAR----VINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELA 178

Query: 189 TDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
            ++ I VN IAPG    K TA +               +   ++G   D+A  A+ LAS 
Sbjct: 179 GEH-ITVNAIAPGRFPSKMTAFLLN--DPAALEAEEKSIPLGRWGRPEDMAGLAIMLASR 235

Query: 247 A 247
           A
Sbjct: 236 A 236

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 88.1 bits (218), Expect = 7e-21
 Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 11/192 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG   GIG   +    + GA +AI       L +A A    +G  A  +  D
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADIN---LEAARATAAEIGPAACAISLD 57

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  +    R V + ++ +G +DILVN AA   L P  D++   +  +  I+  GT  M  
Sbjct: 58  VTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMMQ 117

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              + +   GR       GG IIN+++              A KAAV S+T+S  L    
Sbjct: 118 AVARAMIAQGR-------GGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNL-I 169

Query: 190 DYAIRVNGIAPG 201
            + I VN IAPG
Sbjct: 170 RHGINVNAIAPG 181

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 87.7 bits (218), Expect = 9e-21
 Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 28/246 (11%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSL-GIPAIGLEG 68
             KVAL+TGG   IG  I+  L   G  +AI   R      +  A L++L    A  L+ 
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+   +    +V + +  FG+LD LVN A+  +  P   ++   +  +   +    F + 
Sbjct: 65  DLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLS 124

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQIHVSAAKAAVDSITRSLA 184
             A   L+K           G I+NI   +H  A      Y ++  AAKAA++ +TRSLA
Sbjct: 125 QAAAPQLRK---------QRGAIVNI-TDIH--AERPLKGYPVY-CAAKAALEMLTRSLA 171

Query: 185 LEWGTDYAIRVNGIAPGPI---KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
           LE   +  +RVN +APG I   +D         EE R          + G   DIA A  
Sbjct: 172 LELAPE--VRVNAVAPGAILWPED----GNSFDEEARQAILARTPLKRIGTPEDIAEAVR 225

Query: 242 YLASDA 247
           +L +DA
Sbjct: 226 FLLADA 231

Length = 249

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 87.3 bits (217), Expect = 1e-20
 Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 26/208 (12%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA----IGLE 67
           GK  L+TGG SGIG  ++ +L K GA + I+ R ++ L  AV  + +    +      + 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            D+   E+  +     +   G  D++VN A  +     EDL+   F   ++++  G+  +
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNV 120

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATL------HYTATWYQIHVSAAKAAVDSITR 181
            H  L  +K+   G         I+ +S+         Y+A  Y      +K A+  +  
Sbjct: 121 AHAVLPLMKEQRPGH--------IVFVSSQAALVGIYGYSA--Y----CPSKFALRGLAE 166

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGV 209
           SL  E    Y IRV+ + P    DT G 
Sbjct: 167 SLRQEL-KPYNIRVSVVYPPDT-DTPGF 192

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 86.9 bits (216), Expect = 2e-20
 Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 13/198 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGKVAL+TG  SGIG   +  L + GA + +  RR+  L +    + +    A+ L  D
Sbjct: 4   LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  R      +E+    FG++DILVN A      P ++   + +  +I+ +  G      
Sbjct: 62  VTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTR 121

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             L  + +   G         IIN+ +    Y      ++  A KAAV + +  L  E  
Sbjct: 122 AVLPGMVERKSGH--------IINLGSIAGRYPYPGGAVY-GATKAAVRAFSLGLRQELA 172

Query: 189 TDYAIRVNGIAPGPIKDT 206
               IRV  I+PG ++ T
Sbjct: 173 -GTGIRVTVISPGLVETT 189

Length = 246

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 86.6 bits (215), Expect = 2e-20
 Identities = 57/235 (24%), Positives = 93/235 (39%), Gaps = 15/235 (6%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
            VAL+TG    IG  I+  L   G  + +   R +   +     L++L   A+ ++ D+ 
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
                  +V +    FG+ D+LVN A+  +  P    S + +  +  I+    +++    
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAF 120

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
            + L     G         IINI   +             +KAA++ +TRS ALE   + 
Sbjct: 121 ARRLAGSRNGS--------IINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN- 171

Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
            IRVNGIAPG I     +     E    K              +IA A ++L   
Sbjct: 172 -IRVNGIAPGLILLPEDMDAEYRENALRKVPLKRR----PSAEEIADAVIFLLDS 221

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 3e-20
 Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 4/238 (1%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG  SG+G   +  L + GA + +  RR   L+   A + + G  A  +  D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +     V       G +DILVN +  +      D++P  F  V + ++ G F +  
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQ 126

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEWG 188
           E  K +    +G  ++  GG IINI A++       QI +   +KAAV  +TR++ALEWG
Sbjct: 127 EVAKRMIARAKGAGNTKPGGRIINI-ASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWG 185

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
             + I VN I PG I DT         E   K    +   + G+  D+    L LA+D
Sbjct: 186 R-HGINVNAICPGYI-DTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAAD 241

Length = 258

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 85.6 bits (212), Expect = 3e-20
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 18/211 (8%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           K AL+TG   GIG   +  L   G  + I  R +  L +A A         +GL GDVR 
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQE---LEGVLGLAGDVRD 57

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             D  R V++    FG LD LVN A    + P E+L+P  +R V++ +  G F   H+A 
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
             L + G        GG I+N+ +     A       +A+K  +  ++ +  L+   +  
Sbjct: 118 PALLRRG--------GGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDL-REAN 168

Query: 193 IRVNGIAPGPI-KDTAGVS-----KLAPEEI 217
           IRV  + PG +    AG       KLAPE++
Sbjct: 169 IRVVNVMPGSVDTGFAGSPEGQAWKLAPEDV 199

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 86.4 bits (214), Expect = 4e-20
 Identities = 78/254 (30%), Positives = 122/254 (48%), Gaps = 30/254 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL--- 66
            K KV L+TGGGSG+G   +++L K GA ++++   +  L +A AAL  +  P   +   
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEI-APDAEVLLI 59

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           + DV         V++T+  FG++D    NA         ED   + F  V+ I+  G F
Sbjct: 60  KADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVF 119

Query: 126 IMCHEALKYLKKGGRGQA--SSSSGGI--IINISATLHYTATWYQIHVSAAKAAVDSITR 181
               + LK +++ G G    ++S GGI  + N            Q   +AAK  V  +TR
Sbjct: 120 YGLEKVLKVMREQGSGMIVNTASVGGIRGVGN------------QSGYAAAKHGVVGLTR 167

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMA---AYKFGEKW 234
           + A+E+G  Y IR+N IAPG I  T  V     +L PE       ++++     +FGE  
Sbjct: 168 NSAVEYG-QYGIRINAIAPGAIL-TPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPE 225

Query: 235 DIAMAALYLASDAA 248
           ++A    +L SD A
Sbjct: 226 EVAAVVAFLLSDDA 239

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 85.8 bits (213), Expect = 4e-20
 Identities = 62/222 (27%), Positives = 94/222 (42%), Gaps = 29/222 (13%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
           KG VA++TGG SG+G     +L   GA + I+        S    +  LG     +  DV
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPN----SPGETVAKLGDNCRFVPVDV 56

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAA-----------GNFLVPAEDLSPNGFRTVIEI 119
              +D    +      FG+LDI+VN A            G      E      F+ VI +
Sbjct: 57  TSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLEL-----FQRVINV 111

Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSG--GIIINISATLHYTATWYQIHVSAAKAAVD 177
           + +GTF +   A   + K          G  G+IIN ++   +     Q   SA+K  + 
Sbjct: 112 NLIGTFNVIRLAAGAMGK----NEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIV 167

Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 219
            +T  +A +      IRV  IAPG + DT  ++ L PE++R 
Sbjct: 168 GMTLPIARDLAPQ-GIRVVTIAPG-LFDTPLLAGL-PEKVRD 206

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 86.2 bits (214), Expect = 5e-20
 Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 19/242 (7%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVR 71
            VAL+TGG  GIG  I+  L   G  +AI  R     L +    L +LG+  I    DV 
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 72  KREDAVRVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTF 125
                  ++++    +G++D LVN A       G+ L    DL+P  F  V+ I+  G F
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLL----DLTPESFDRVLAINLRGPF 118

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            +     K +      +        I+ +S+      +  +     +KA +    +  A 
Sbjct: 119 FLTQAVAKRMLAQPEPEELPH--RSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAA 176

Query: 186 EWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
               +  I V  + PG IK   TA V+      I           ++GE  D+A A   L
Sbjct: 177 RLA-EEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLV---PMPRWGEPEDVARAVAAL 232

Query: 244 AS 245
           AS
Sbjct: 233 AS 234

Length = 256

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 85.6 bits (212), Expect = 6e-20
 Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 26/247 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+VA++TGGGSGIG   + +L   GA + +        ++A   +  L +P      D
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPT-----D 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS-----PNGFRTVIEIDSVGT 124
           V   +    + ++    +G +DI  N A    + P ED S      + ++ V +++    
Sbjct: 60  VTDEDAVNALFDTAAETYGSVDIAFNNAG---ISPPEDDSILNTGLDAWQRVQDVNLTSV 116

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           ++ C  AL ++ + G+G   +++  + +  SAT        QI  +A+K  V +++R L 
Sbjct: 117 YLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-------SQISYTASKGGVLAMSRELG 169

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAAL 241
           +++     IRVN + PGP+ +T  + +L    PE    +   ++   +F E  +IA A  
Sbjct: 170 VQFARQ-GIRVNALCPGPV-NTPLLQELFAKDPERAARRLV-HVPMGRFAEPEEIAAAVA 226

Query: 242 YLASDAA 248
           +LASD A
Sbjct: 227 FLASDDA 233

Length = 255

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.2 bits (211), Expect = 9e-20
 Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 13/202 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           LK KV ++TG G GIG  I+++L K G+ + +   +R   +   +  +   G   IG+  
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLA 63

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV  RE    + ++TI+ +G  DILVN A      P  ++        I  D        
Sbjct: 64  DVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCS 123

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            E  K +++GG     +S  GI      +++           A KAAV ++T+ LALE  
Sbjct: 124 QELAKEMREGGAIVNIASVAGIRPAYGLSIY----------GAMKAAVINLTKYLALELA 173

Query: 189 TDYAIRVNGIAPGPIKDTAGVS 210
               IRVN IAPG +K   G S
Sbjct: 174 P--KIRVNAIAPGFVKTKLGES 193

Length = 252

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 68/261 (26%), Positives = 104/261 (39%), Gaps = 53/261 (20%)

Query: 12  GKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           GK  L+TG  +   I + I+  L + GA +A   + + + +        LG  A+ L  D
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEIDS 121
           V   E+   +       +GKLD LV++ A        G FL    D S  GF   ++I +
Sbjct: 61  VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFL----DTSRKGFLKALDISA 116

Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----VSAAKAAVD 177
                +   AL  +  G         G I+     TL Y  +   +     +  AKAA++
Sbjct: 117 YSLVSLAKAALPIMNPG---------GSIV-----TLSYLGSERVVPGYNVMGVAKAALE 162

Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW--- 234
           S  R LA E G    IRVN I+ GPIK  A           S  T +    ++ E+    
Sbjct: 163 SSVRYLAYELG-RKGIRVNAISAGPIKTLAA----------SGITGFDKMLEYSEQRAPL 211

Query: 235 -------DIAMAALYLASDAA 248
                  ++   A +L SD +
Sbjct: 212 GRNVTAEEVGNTAAFLLSDLS 232

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 84.7 bits (210), Expect = 1e-19
 Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 13/238 (5%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR--KTVLRSAVAALHSLGIPAIGLEGDV 70
           +VA++T   SGIG   +L L + G  I I      +    +A   + S G+ A   + D+
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA-EEVRSHGVRAEIRQLDL 61

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
               +  + ++  I   G++D+LVN A      P  D+  + +R +  +D  G F+    
Sbjct: 62  SDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQI 121

Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
           A +++ K G+       GG IINI++   +T        +AAK A+  +T+++ALE   +
Sbjct: 122 AARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALEL-VE 173

Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           + I VN +APG I     ++ +   +++  +   +   + G+  +IA    +L S+ A
Sbjct: 174 HGILVNAVAPGAI--ATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGA 229

Length = 256

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 84.7 bits (210), Expect = 1e-19
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 11/194 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA--IGLE 67
           L+G+VA++TGG SGIG      L + GA++AI GR +  L SA A L      A  +   
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            DV    D      +    FG +D+LVN A    +    D + + +R  +E+        
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINP 125

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
               L  L+         S+   I+ +++ L      + +  SAA+A + ++ +SLA E 
Sbjct: 126 TRAFLPLLRA--------SAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATEL 177

Query: 188 GTDYAIRVNGIAPG 201
                +RVN I  G
Sbjct: 178 -APKGVRVNSILLG 190

Length = 265

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 84.5 bits (209), Expect = 2e-19
 Identities = 84/267 (31%), Positives = 127/267 (47%), Gaps = 41/267 (15%)

Query: 3   SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP 62
           S      L GKVAL+TGG +GIG  I     KHGA + I+  +  + ++   +L   G P
Sbjct: 9   SSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG--GEP 66

Query: 63  AIG-LEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEI 119
            +     DV   +D  R V+ T++ FG LDI+VN A   G       ++  + F  V ++
Sbjct: 67  NVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDV 126

Query: 120 DSVGTFI-MCHEA--LKYLKKG---GRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
           +  G F+ M H A  +  LKKG        +S+ GG+         YT +         K
Sbjct: 127 NVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL-----GPHAYTGS---------K 172

Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGE 232
            AV  +TRS+A E G  + IRVN ++P  +     ++ L PE+ R++  D +A ++ F  
Sbjct: 173 HAVLGLTRSVAAELG-KHGIRVNCVSPYAVPTALALAHL-PEDERTE--DALAGFRAFAG 228

Query: 233 KW-----------DIAMAALYLASDAA 248
           K            D+A A L+LASD A
Sbjct: 229 KNANLKGVELTVDDVANAVLFLASDEA 255

Length = 280

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 83.7 bits (207), Expect = 2e-19
 Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 16/239 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             GK AL+TG G GIG      L K GA +  + R +  L S V     +      +  D
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGI----EPVCVD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   +      E  +   G +D+LVN AA   L P  +++   F    +++      +  
Sbjct: 61  LSDWD----ATEEALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQ 116

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              + +   G         G I+N+S+     A        + KAA+D +T+ +ALE G 
Sbjct: 117 IVARGMIARG-------VPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGP 169

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            + IRVN + P  +    G    +  E   K  + +   KF E  D+  A L+L SD +
Sbjct: 170 -HKIRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKS 227

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 83.8 bits (207), Expect = 3e-19
 Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 18/243 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVA++TG  +G+G  +++ L K GA I  +G          A + +LG     +  D
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA--EAPETQAQVEALGRKFHFITAD 63

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL---SPNGFRTVIEIDSVGTFI 126
           + +++D   +V   +   G +DIL+N A    ++  +DL       +  VI I+    F 
Sbjct: 64  LIQQKDIDSIVSQAVEVMGHIDILINNAG---IIRRQDLLEFGNKDWDDVININQKTVFF 120

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +     K   K G       +GG IINI++ L +         +A+K+AV  +TR+LA E
Sbjct: 121 LSQAVAKQFVKQG-------NGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATE 173

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLAS 245
             + Y I VN IAPG +  T   + L  +  R++A  + + A ++G   D+A  A++L+S
Sbjct: 174 L-SQYNINVNAIAPGYMA-TDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSS 231

Query: 246 DAA 248
            A+
Sbjct: 232 SAS 234

Length = 251

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 83.3 bits (206), Expect = 5e-19
 Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 36/251 (14%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK KVA++TGG  GIG  +  +L + G+ +     ++    S     +         + D
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE---PSYNDVDY--------FKVD 52

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  +E  ++ ++  I+ +G++DILVN A          +  + +  +I ++  G F+M  
Sbjct: 53  VSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSK 112

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             + Y+ K           G+IINI++   +  T        +K AV  +TRS+A+    
Sbjct: 113 YTIPYMLKQD--------KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAV---- 160

Query: 190 DYA--IRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAY---KFGEKWDIA 237
           DYA  IR   + PG I  T  +   A       PE +  K  ++   +   + G+  ++A
Sbjct: 161 DYAPTIRCVAVCPGSI-RTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVA 219

Query: 238 MAALYLASDAA 248
               +LASD A
Sbjct: 220 YVVAFLASDLA 230

Length = 258

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 83.0 bits (205), Expect = 7e-19
 Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +VAL+TG  SGIG  I+ +LGK G  + +  R +  L + V  L   G+ A G   DVR 
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRS 63

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             +   +V + +  +G +D+LVN A  +      +L+   +  V+E +  G F +  E  
Sbjct: 64  VPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEV- 122

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
             LK GG  +  +   G IINI++T       +    SA+K  V   T++L LE      
Sbjct: 123 --LKAGGMLERGT---GRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART-G 176

Query: 193 IRVNGIAPGPIKDT---------AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           I VN + PG ++           A + +++ EE   + T  +   ++    ++A    YL
Sbjct: 177 ITVNAVCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYL 236

Query: 244 ASDAA 248
             D A
Sbjct: 237 IGDGA 241

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 80.3 bits (199), Expect = 9e-19
 Identities = 40/181 (22%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTV--LRSAVAALHSLGIPAIGLEGD 69
              L+TGG  G+G  ++  L   GA   ++  RR         VA L +LG        D
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  R+    ++ +     G LD +V+ A      P E+L+P  F  V+     G + +  
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWY---QIHVSAAKAAVDSITRSLALE 186
                              G  +  S+            Q + +AA AA+D++      E
Sbjct: 121 LTRD------------LDLGAFVLFSSV---AGVLGSPGQANYAAANAALDALAEHRRAE 165

Query: 187 W 187
            
Sbjct: 166 G 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 82.4 bits (204), Expect = 9e-19
 Identities = 73/253 (28%), Positives = 111/253 (43%), Gaps = 39/253 (15%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +  L+TGG  G+G  I+    + GA + +   +     +A A    LG  AI L+ DV  
Sbjct: 6   QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE--DAAEALADELGDRAIALQADVTD 63

Query: 73  REDAVRVVESTINHFGK-LDILVNAAAGNFLV------PAEDLSPNGFRTVIEIDSVGTF 125
           RE    +  +   HFGK +  +VN A  +F         A+D++   F+  +E    G  
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV------SAAKAAVDSI 179
                AL  +++ G G+        IINI   L      +Q  V      + AKAA+  +
Sbjct: 124 NTIQAALPGMREQGFGR--------IINIGTNL------FQNPVVPYHDYTTAKAALLGL 169

Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA----YKFGEKWD 235
           TR+LA E G  Y I VN ++ G ++ T   S   P+E+     D +AA     K     +
Sbjct: 170 TRNLAAELG-PYGITVNMVSGGLLRTT-DASAATPDEV----FDLIAATTPLRKVTTPQE 223

Query: 236 IAMAALYLASDAA 248
            A A L+ AS  A
Sbjct: 224 FADAVLFFASPWA 236

Length = 253

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 82.2 bits (203), Expect = 1e-18
 Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 24/251 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            +GKV ++TG   GIG  ++ +L   GA + ++ R + V    +A + + G  A     D
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVH-EVLAEILAAGDAAHVHTAD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
           +     A  VV + +  FG++D+L+N   G     P E          I      T   C
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCC 120

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
              L ++ +  R Q      G+I+N+S+    T   Y+I  SAAK  V+++T SLA E  
Sbjct: 121 RAVLPHMLE--RQQ------GVIVNVSSIA--TRGIYRIPYSAAKGGVNALTASLAFEHA 170

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-----------KFGEKWDIA 237
               IRVN +APG  +            +  +   +               ++G   +  
Sbjct: 171 -RDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQV 229

Query: 238 MAALYLASDAA 248
            A L+LASD A
Sbjct: 230 RAILFLASDEA 240

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 82.5 bits (204), Expect = 1e-18
 Identities = 73/246 (29%), Positives = 118/246 (47%), Gaps = 20/246 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLE- 67
            + +  L+TGGGSGIG  ++  L   GAA+ I+GR    L +A   + +L G  A+  E 
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFI 126
            DV   +   R V++     G+L  +V+ A G+  + P   +  + +R  ++++  GT  
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMY 124

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISA-TLHYTATWYQIHVSAAKAAVDSITRSLAL 185
           +   A + L +GG        GG  + IS+     T  W+  +    K+AVD + +  A 
Sbjct: 125 VLKHAARELVRGG--------GGSFVGISSIAASNTHRWFGAY-GVTKSAVDHLMKLAAD 175

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY---KFGEKWDIAMAALY 242
           E G  + +RVN I PG I+           E+ +   DY A     + GE  D+A  A++
Sbjct: 176 ELGPSW-VRVNSIRPGLIRTDLVAPITESPELSA---DYRACTPLPRVGEVEDVANLAMF 231

Query: 243 LASDAA 248
           L SDAA
Sbjct: 232 LLSDAA 237

Length = 276

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 81.6 bits (202), Expect = 2e-18
 Identities = 66/219 (30%), Positives = 96/219 (43%), Gaps = 34/219 (15%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL--- 66
           L+GK+ ++TGG SGIG  I  +L  +GA +              A +H            
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVN------------ADIHGGDGQHENYQFV 54

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAED------LSPNGFRTVI 117
             DV   E+    V   I  FG++D LVN A  N    LV  +D      L+   F  + 
Sbjct: 55  PTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMF 114

Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
            I+  G F+M     + + K           G+I+N+S+      +  Q   +A KAA++
Sbjct: 115 NINQKGVFLMSQAVARQMVKQH--------DGVIVNMSSEAGLEGSEGQSCYAATKAALN 166

Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216
           S TRS A E G  + IRV G+APG I +  G+     EE
Sbjct: 167 SFTRSWAKELG-KHNIRVVGVAPG-ILEATGLRTPEYEE 203

Length = 266

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 81.2 bits (200), Expect = 3e-18
 Identities = 75/246 (30%), Positives = 113/246 (45%), Gaps = 24/246 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           L GKVAL+TG   GIG  I+++L   GA +AI  GR K      +  + S G  A  +E 
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEA 63

Query: 69  DVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
           D+   +   ++VE   N         ++DILVN A        E+ +   F  ++ ++  
Sbjct: 64  DLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIK 123

Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT---LHYTATWYQIHVSAAKAAVDSI 179
             F +  + L  L+  GR          +INIS+    L +T +   I    +K A++++
Sbjct: 124 APFFLIQQTLPLLRAEGR----------VINISSAEVRLGFTGS---IAYGLSKGALNTM 170

Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
           T  LA   G +  I VN I PG  K       L   EIR+ AT+     + G+  DIA A
Sbjct: 171 TLPLAKHLG-ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADA 229

Query: 240 ALYLAS 245
             +LAS
Sbjct: 230 VAFLAS 235

Length = 254

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 80.9 bits (200), Expect = 3e-18
 Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 8/173 (4%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
           V ++TG  SGIG   +L   + GA + +  R    L      +  LG  AI +  DV   
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61

Query: 74  EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
               R  ++ +  FG++D  VN A        ED++P  FR V +++ +G       AL 
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALP 121

Query: 134 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +L++ G        GG +IN+ + L Y +   Q   SA+K AV   T SL  E
Sbjct: 122 HLRRRG--------GGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAE 166

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 81.4 bits (201), Expect = 3e-18
 Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 23/249 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG   GIG  I+    +HGA + ++     + + A   L   G     +  D
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLA-DELCGRGHRCTAVVAD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           VR        ++      G++DILVN A    L    D+S       I+I+  G + +  
Sbjct: 63  VRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTK 122

Query: 130 EALKYLKKGGRGQ---ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
             L  +     G+    SS +G ++ +   T +             KAA+  +T+SLA+E
Sbjct: 123 AVLPEMIARKDGRIVMMSSVTGDMVADPGETAYAL----------TKAAIVGLTKSLAVE 172

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAY---KFGEKWDIAMA 239
           +     IRVN I PG ++ T     +A    PE+  S  T+   A    +  +  ++   
Sbjct: 173 YA-QSGIRVNAICPGYVR-TPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGEL 230

Query: 240 ALYLASDAA 248
           A +LASD +
Sbjct: 231 AAFLASDES 239

Length = 263

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 80.7 bits (199), Expect = 4e-18
 Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 12/240 (5%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
            +AL+TGG  GIG   +L L + G  +A+   +     +  V  +   G  A  L+ D+ 
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADIS 61

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
                V +  +   H   L  LVN A   F     E+L+      V+  +  G F+ C E
Sbjct: 62  DENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCRE 121

Query: 131 ALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           A+K +     G      GG I+N+ SA     A    +  +A+K A+D++T  L+LE   
Sbjct: 122 AVKRMALKHGGS-----GGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAA 176

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              IRVN + PG I      S   P  + R K+   M   + G+  ++A A ++L SD A
Sbjct: 177 Q-GIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ--RGGQPEEVAQAIVWLLSDKA 233

Length = 247

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 81.0 bits (200), Expect = 4e-18
 Identities = 66/209 (31%), Positives = 97/209 (46%), Gaps = 20/209 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKG+V L+TGG SG+G  I  +    GA +A++ +    L+  + A H  G   +G+EGD
Sbjct: 3   LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ-ELEAAH--GDAVVGVEGD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVP----AEDLSPNGFRTVIEIDSVGT 124
           VR  +D    V   +  FGK+D L+ NA   ++        +D     F  V  I+  G 
Sbjct: 60  VRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGY 119

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
            +    AL  L         +S G +I  IS    Y      ++ +AAK AV  + + LA
Sbjct: 120 LLAVKAALPAL--------VASRGSVIFTISNAGFYPNGGGPLY-TAAKHAVVGLVKELA 170

Query: 185 LEWGTDYAIRVNGIAPGPI-KDTAGVSKL 212
            E      +RVNG+APG +  D  G   L
Sbjct: 171 FELAP--YVRVNGVAPGGMSSDLRGPKSL 197

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 80.2 bits (198), Expect = 5e-18
 Identities = 67/239 (28%), Positives = 104/239 (43%), Gaps = 16/239 (6%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGLEGD 69
           ++AL+TGG  GIG  I  +L K G  +A           A A L   G        +EGD
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE--ERAEAWLQEQGALGFDFRVVEGD 58

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   E     V       G +D+LVN A        + ++   +  VI+ +    F +  
Sbjct: 59  VSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQ 118

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +  +++ G G+        IINIS+       + Q + SAAKA +   T++LA E G 
Sbjct: 119 PVIDGMRERGWGR--------IINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQE-GA 169

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              + VN I+PG I  T  V  +  E++ +     +   + G   +IA A  +LAS+ A
Sbjct: 170 TKGVTVNTISPGYI-ATDMVMAM-REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEA 226

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 79.6 bits (197), Expect = 9e-18
 Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 27/249 (10%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
            L+TG   GIG+ ++  L + GA +A + R    L   VA L   G P    + DV    
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 75  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
               VV+     +G +D+LVN A    L   + LS   ++    +++ G F +       
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSPR 120

Query: 135 LKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
           +K+   G      S+++    + ++A   Y         +A+KAA+  +T+ L LE    
Sbjct: 121 MKRRRSGAIVTVGSNAANVPRMGMAA---Y---------AASKAALTMLTKCLGLELA-P 167

Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKATDYMAAYKFG-------EKWDIAMAAL 241
           Y IR N ++PG   DT    +L  +E   +         ++ G       E  DIA A L
Sbjct: 168 YGIRCNVVSPGS-TDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVL 226

Query: 242 YLASDAAVH 250
           +LASD A H
Sbjct: 227 FLASDLASH 235

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 78.8 bits (194), Expect = 2e-17
 Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 15/237 (6%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           GKVA++TGGG GIG +I L   + G  +      +   R A  A  + G     + GDV 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE--RGADFA-EAEGPNLFFVHGDVA 57

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
                  VV + +   G++D+LVN AA         L    +  ++ ++  G + +    
Sbjct: 58  DETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYC 117

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
              L K           G IINI++T  + +       +A+K  + ++T +LA+  G D 
Sbjct: 118 RDELIKN---------KGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD- 167

Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            IRVN I+PG I +T    +     +  +      A + G   DIA   L+L    A
Sbjct: 168 -IRVNCISPGWI-NTTEQQEFTAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQQDA 222

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 81.1 bits (200), Expect = 2e-17
 Identities = 68/258 (26%), Positives = 109/258 (42%), Gaps = 28/258 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---HSLGIPAIGL 66
           L  +VA +TGG  GIG E + +L   GA + +         +  A +      G  A+ L
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGR-AVAL 470

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           + DV   +            +G +DI+VN A      P E+ +   ++  ++I + G F+
Sbjct: 471 KMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFL 530

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +  EA + +++ G        GG I+ I++     A       SAAKAA   + R LA E
Sbjct: 531 VAREAFRQMREQG-------LGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAE 583

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MAAYKFGEKW----------- 234
            G  Y IRVN + P  +   +G+     E    +A  Y + A +  E +           
Sbjct: 584 -GGTYGIRVNTVNPDAVLQGSGI--WDGEWREERAAAYGIPADELEEHYAKRTLLKRHIF 640

Query: 235 --DIAMAALYLASDAAVH 250
             DIA A  +LAS  +  
Sbjct: 641 PADIAEAVFFLASSKSEK 658

Length = 676

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 78.3 bits (193), Expect = 2e-17
 Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 22/229 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
           L GK   +TG   GIG  I+L+  + GA + I  +           + +A   + + G  
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 63  AIGLEGDVRKREDAVRV-VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 121
           A+    D+R  ED VR  VE  +  FG +DILVN A+   L    D     +  ++ +++
Sbjct: 61  ALPCIVDIRD-EDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNT 119

Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSI 179
            GT++     L YLKK             I+N+S  L+    W++ H   + AK  +   
Sbjct: 120 RGTYLCSKACLPYLKKSKNPH--------ILNLSPPLNLNPKWFKNHTAYTMAKYGMSMC 171

Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI--RSKATDYMA 226
              +A E+     I VN + P     TA ++ L   ++    +  + MA
Sbjct: 172 VLGMAEEFK-PGGIAVNALWPRTAIATAAMNMLGGVDVAACCRKPEIMA 219

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 78.0 bits (192), Expect = 3e-17
 Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 17/229 (7%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IG 65
           +L  ++ L+TG   GIG E +L   ++GA + ++GR +  LR     ++  G        
Sbjct: 1   LLNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFI 60

Query: 66  LEGDVRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
           L+      E+  ++ +    ++ +LD +L NA     + P  + +P  ++ V +++   T
Sbjct: 61  LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNAT 120

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           F++    L  L K        S  G ++  S+++           + +K A + + + LA
Sbjct: 121 FMLTQALLPLLLK--------SDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLA 172

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE---IRSKATDYMAAYKF 230
            E+     +RVN I PG    TA  +   P E         D M  Y +
Sbjct: 173 DEY-QQRNLRVNCINPGGT-RTAMRASAFPTEDPQKLKTPADIMPLYLW 219

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 78.0 bits (192), Expect = 4e-17
 Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 15/244 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K A++TGGG GIG     +  + GA +A+    +       A + + G  A     D
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +  R+     V +     G +D+LVN A  +   P     P  +  +I I+  G   M H
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHH 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             L  + + G G+        I+NI++      +  +   +A K  + + ++++A E   
Sbjct: 121 AVLPGMVERGAGR--------IVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHAR 172

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
            + I VN + PGP  DTA +  +      PE++R   T  +   + G+  D+  A L+ +
Sbjct: 173 -HGITVNVVCPGP-TDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFS 230

Query: 245 SDAA 248
           SD A
Sbjct: 231 SDDA 234

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 77.8 bits (191), Expect = 5e-17
 Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 15/242 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG  +GIG  ++L   + GA +AI  R    L      + + G   + +  D
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V + +    +++      G +DI V  A    + P  D+    F+ +   +  G F+   
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQ 126

Query: 130 EALKYLKKGGRGQA---SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
            A K + K G+G     ++S  G IIN+   +         H  A+KAAV  +T+++A+E
Sbjct: 127 AAAKAMVKQGQGGVIINTASMSGHIINVPQQVS--------HYCASKAAVIHLTKAMAVE 178

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
               + IRVN ++PG I  T  V      E +      +   + G   ++A   LYLAS+
Sbjct: 179 LAP-HKIRVNSVSPGYIL-TELVEPYT--EYQPLWEPKIPLGRLGRPEELAGLYLYLASE 234

Query: 247 AA 248
           A+
Sbjct: 235 AS 236

Length = 253

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 77.4 bits (191), Expect = 6e-17
 Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 19/241 (7%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA----ALHSLGIPAIGLEGDV 70
           A +TG   G+G  I+ ++ + GA + +          A A    A H  G+ A     DV
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGV-AFAAVQDV 60

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
                   ++    +  G L +LVN A        E +  + +R V+ I+    F+ C  
Sbjct: 61  TDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKH 120

Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-T 189
           AL YL+              I+NIS+   + A       +A+KAAV S+T+S+AL+    
Sbjct: 121 ALPYLRASQPAS--------IVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARR 172

Query: 190 DYAIRVNGIAPGPIKDT---AGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
              +R N I P  I  T     + + L  EE   K    +   + GE  D+A A LYLAS
Sbjct: 173 GLDVRCNSIHPTFI-RTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLAS 231

Query: 246 D 246
           D
Sbjct: 232 D 232

Length = 251

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 77.6 bits (191), Expect = 9e-17
 Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 14/197 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
           L+G+ AL+TG  SGIG   ++   + GA IA+  +   +      V  + + G  A+ L 
Sbjct: 53  LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFI 126
           GD++      ++VE  +   G LDILVN A     V    D++   F    + +    F 
Sbjct: 113 GDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFW 172

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +C  A+ +L  G    AS      IIN  +   Y  +   +  ++ KAA+ + T++LA +
Sbjct: 173 LCKAAIPHLPPG----AS------IINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQ 222

Query: 187 WGTDYAIRVNGIAPGPI 203
              +  IRVN +APGP+
Sbjct: 223 V-AEKGIRVNAVAPGPV 238

Length = 300

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 76.6 bits (189), Expect = 9e-17
 Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 28/213 (13%)

Query: 8   DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
             L G   L+TGG SGIG  ++ +  + G  + I GRR+  L  A   L ++      + 
Sbjct: 1   MKLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHT----IV 56

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVG 123
            DV   E    + E+ ++ +  LDIL+N A      +   PA DL  +   T I+ + +G
Sbjct: 57  LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDL--DKADTEIDTNLIG 114

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH--VSAAKAAVDSITR 181
              +    L +LKK  + +A+      I+N+S+ L +       +    A KAA+ S T 
Sbjct: 115 PIRLIKAFLPHLKK--QPEAT------IVNVSSGLAFVP--MAANPVYCATKAALHSYTL 164

Query: 182 SL--ALEWGTDYAIRVNGIAPGPIKDTAGVSKL 212
           +L   L+   D  + V  I P P  DT    + 
Sbjct: 165 ALRHQLK---DTGVEVVEIVP-PAVDTELHEER 193

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 30/248 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVA++TGG + IG  ++  L   GA +AI+        +AVAA  SLG  A  +  D
Sbjct: 4   LAGKVAIVTGGATLIGAAVARALVAAGARVAIVD-IDADNGAAVAA--SLGERARFIATD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +       R V + +  FG++DILVN A   +L      S   +   ++++ V   ++  
Sbjct: 61  ITDDAAIERAVATVVARFGRVDILVNLAC-TYLDDGLASSRADWLAALDVNLVSAAMLAQ 119

Query: 130 EALKYLKKGGRGQASSSSGGIIIN---ISATLHYTATW-YQIHVSAAKAAVDSITRSLAL 185
            A  +L +G         GG I+N   ISA    T  W Y     A+KAA+  +TRS+A+
Sbjct: 120 AAHPHLARG---------GGAIVNFTSISAKFAQTGRWLY----PASKAAIRQLTRSMAM 166

Query: 186 EWGTDYAIRVNGIAPG----PIKDT-AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           +   D  IRVN ++PG     + D  +G  +   + +   A  +    + G+  ++A   
Sbjct: 167 DLAPD-GIRVNSVSPGWTWSRVMDELSGGDRAKADRV---AAPFHLLGRVGDPEEVAQVV 222

Query: 241 LYLASDAA 248
            +L SDAA
Sbjct: 223 AFLCSDAA 230

Length = 261

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 76.2 bits (188), Expect = 1e-16
 Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 29/206 (14%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIA---IMGRRKTVLRSAVAA------LHSL 59
              G+V L+TG G G+G   +L   + GA +    + G RK   +S+ AA      + + 
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 60  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRT 115
           G  A+     V   ED  ++V++ I+ FG++DILVN A      +F   +E+     +  
Sbjct: 62  GGKAVANYDSV---EDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEED----WDL 114

Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175
           V+ +   G+F +   A  Y++K           G IIN S+       + Q + SAAK  
Sbjct: 115 VMRVHLKGSFKVTRAAWPYMRK--------QKFGRIINTSSAAGLYGNFGQANYSAAKLG 166

Query: 176 VDSITRSLALEWGTDYAIRVNGIAPG 201
           +  ++ +LA+E G  Y I  N IAP 
Sbjct: 167 LLGLSNTLAIE-GAKYNITCNTIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 75.7 bits (187), Expect = 3e-16
 Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 58/264 (21%)

Query: 9   ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
           +L+GK  L+ G  +   I + I+  L + GA +A   +    L   V  L       + L
Sbjct: 3   LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQ-GERLEKRVEELAEELGSDLVL 61

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
             DV   E    +  +    +GKLD LV++ A        G++L    D S  GF   ++
Sbjct: 62  PCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYL----DTSREGFLIAMD 117

Query: 119 IDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----YQIHVSAA 172
           I S  +F  +   A   +  GG          I+     TL Y  +      Y + +  A
Sbjct: 118 I-SAYSFTALAKAARPLMNNGG---------SIL-----TLTYLGSERVVPNYNV-MGVA 161

Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
           KAA+++  R LA + G    IRVN I+ GPI+  A           S   D+    K  E
Sbjct: 162 KAALEASVRYLAADLG-KEGIRVNAISAGPIRTLAA----------SGIGDFRKMLKENE 210

Query: 233 KW----------DIAMAALYLASD 246
                       ++   A +L SD
Sbjct: 211 ANAPLRRNVTIEEVGNTAAFLLSD 234

Length = 259

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 75.2 bits (185), Expect = 3e-16
 Identities = 65/250 (26%), Positives = 100/250 (40%), Gaps = 41/250 (16%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
            GKVAL+T    GIG  I+L   + GA +      +  L+         GI    L  DV
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELER---GPGITTRVL--DV 55

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
             +E     V +     G++D+L N A     G+ L    D   + +   + ++    ++
Sbjct: 56  TDKEQ----VAALAKEEGRIDVLFNCAGFVHHGSIL----DCEDDDWDFAMNLNVRSMYL 107

Query: 127 MCHEAL-KYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           M    L K L +           G IIN+ S          +   S  KAAV  +T+S+A
Sbjct: 108 MIKAVLPKMLARK---------DGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVA 158

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAY---KFGEKWDI 236
            ++     IR N I PG + DT  + +       PEE       + A     +     ++
Sbjct: 159 ADF-AQQGIRCNAICPGTV-DTPSLEERIQAQPDPEEAL---KAFAARQPLGRLATPEEV 213

Query: 237 AMAALYLASD 246
           A  A+YLASD
Sbjct: 214 AALAVYLASD 223

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 71/249 (28%), Positives = 110/249 (44%), Gaps = 28/249 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+ KVA++TG  +GIG   ++ L + GA + +       +   V  + S G  A     D
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAYHVD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA-----AGNFLVPAEDLSPNGFRTVIEIDSVGT 124
           +   +            FG++D+L N A     AG       D+    F  ++ +D  GT
Sbjct: 63  ISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDV----FDKIMAVDMRGT 118

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           F+M    L  + +          GG IIN S+     A  Y+   +AAK AV + T+S+A
Sbjct: 119 FLMTKMLLPLMME---------QGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIA 169

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF-------GEKWDIA 237
           +E+G D  IR N IAPG I +T  V KL           +    K+       G+  ++A
Sbjct: 170 IEYGRD-GIRANAIAPGTI-ETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVA 227

Query: 238 MAALYLASD 246
              ++LASD
Sbjct: 228 KLVVFLASD 236

Length = 272

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 75.2 bits (185), Expect = 4e-16
 Identities = 69/254 (27%), Positives = 98/254 (38%), Gaps = 46/254 (18%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           K+AL+TG   GIG  I+ +L   G                +A   S    A     +   
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDG-------------YRVIATYFSGNDCAKDWFEEYGF 49

Query: 73  REDAVRVVESTINHF--------------GKLDILVNAAA----GNFLVPAEDLSPNGFR 114
            ED VR+ E  +                 G +DILVN A       F      +S   + 
Sbjct: 50  TEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFK----RMSHQEWN 105

Query: 115 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
            VI  +    F +       + + G         G IINIS+       + Q + SAAKA
Sbjct: 106 DVINTNLNSVFNVTQPLFAAMCEQG--------YGRIINISSVNGLKGQFGQTNYSAAKA 157

Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
            +   T++LA E G  Y I VN IAPG I  T  V +    E+     + +   + G   
Sbjct: 158 GMIGFTKALASE-GARYGITVNCIAPGYIA-TPMVEQ-MGPEVLQSIVNQIPMKRLGTPE 214

Query: 235 DIAMAALYLASDAA 248
           +IA A  +L S+AA
Sbjct: 215 EIAAAVAFLVSEAA 228

Length = 245

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 75.8 bits (186), Expect = 4e-16
 Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 14/239 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
           LK + AL+TGG SGIG   ++   + GA +AI  +   +   +     +   G  A+ L 
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLP 106

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFI 126
           GD+   + A  +V       G LDI+   A     +P   DL+   F+    I+    F 
Sbjct: 107 GDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFW 166

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +  EA+  L KG            II  S+   Y  + + +  +A KAA+ + +R LA +
Sbjct: 167 LTQEAIPLLPKGAS----------IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQ 216

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
              +  IRVN +APGPI     +S    ++   +        + G+  ++A   +YLAS
Sbjct: 217 VA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS 274

Length = 294

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 75.1 bits (184), Expect = 5e-16
 Identities = 76/247 (30%), Positives = 111/247 (44%), Gaps = 24/247 (9%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLE 67
           +LKGKVAL+TG   GIG  I+ +L   GA +AI  G RK      V  + S G  A  + 
Sbjct: 1   MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 60

Query: 68  GDVRKREDAVRVVESTINHF------GKLDILVNAAA---GNFLVPAEDLSPNGFRTVIE 118
            ++        +  S  N         K DIL+N A    G F+   E+ +   F  ++ 
Sbjct: 61  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI---EETTEQFFDRMVS 117

Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
           +++   F +  +AL  L+   R          IINIS+     +    I  S  K A+++
Sbjct: 118 VNAKAPFFIIQQALSRLRDNSR----------IINISSAATRISLPDFIAYSMTKGAINT 167

Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
           +T +LA + G    I VN I PG IK       L+   ++  AT   A  + GE  DIA 
Sbjct: 168 MTFTLAKQLGAR-GITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIAD 226

Query: 239 AALYLAS 245
            A +LAS
Sbjct: 227 TAAFLAS 233

Length = 252

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 74.7 bits (184), Expect = 6e-16
 Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 22/251 (8%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIM---GRRKTVLRSAVAALHSLGIPAIGLE 67
             +VA++ GGG  +G  +   L + G  +A+      +   +   + A +  G+ A G  
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGM-AYGFG 59

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            D    +  + +       FG++D+LV  A         D     F   ++++ VG F+ 
Sbjct: 60  ADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLC 119

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
             E  + + + G         G II I++      + +    SAAK     +T+SLAL+ 
Sbjct: 120 AREFSRLMIRDG-------IQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDL 172

Query: 188 GTDYAIRVNGIAPGPIKDT----------AGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
             +Y I V+ +  G +  +          A    + P+E+     D +   +  +  D+ 
Sbjct: 173 A-EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVL 231

Query: 238 MAALYLASDAA 248
              L+ AS  A
Sbjct: 232 NMLLFYASPKA 242

Length = 259

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 73.7 bits (181), Expect = 1e-15
 Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 12/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEG 68
            +G+VAL+TG   GIG  ++  L +HG  +    RR   + +  A   S G P +   + 
Sbjct: 4   WRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQC 63

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+   E  + +  +       +D+ +N A      P       G++ + +++ +   I  
Sbjct: 64  DLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICT 123

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHV-SAAKAAVDSITRSLALE 186
            EA + +K+           G IINI++   H        H  +A K AV ++T  L  E
Sbjct: 124 REAYQSMKERNVDD------GHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQE 177

Query: 187 W-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
                  IR   I+PG + +T    KL   +    A  Y +      + D+A A LY+ S
Sbjct: 178 LREAKTHIRATSISPGLV-ETEFAFKLHDNDPEKAAATYESIPCLKPE-DVANAVLYVLS 235

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 72.8 bits (179), Expect = 2e-15
 Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KVAL+TG   GIG EI+  L + G  +++  R    L +  A+          +  D R 
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGD----VEAVPYDARD 56

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
            EDA  +V++  + FG++D+LV+ A         + S         I+ +    +    L
Sbjct: 57  PEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116

Query: 133 KYLKKGGRGQA---SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             L++ G G+    +S SG  ++  +A             SA+K A+ ++  +L  E G 
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAGY-----------SASKFALRALAHALRQE-GW 164

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA 213
           D+ +RV+ + PG + DT     L 
Sbjct: 165 DHGVRVSAVCPGFV-DTPMAQGLT 187

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 73.0 bits (180), Expect = 2e-15
 Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 36/254 (14%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             GK   +TG   GIG+ ++L   + GA +    +          A   L         D
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVL---------D 56

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V       +V +  +   G LD+LVNAA    +   + LS   ++    +++ G F +  
Sbjct: 57  VSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFR 116

Query: 130 EALKYLKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
             +   ++   G      S+++    I ++A   Y          A+KAA+ S+ + + L
Sbjct: 117 AVMPQFRRQRSGAIVTVGSNAAHVPRIGMAA---Y---------GASKAALTSLAKCVGL 164

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFG-------EKWDI 236
           E    Y +R N ++PG   DT     L  +E   +     +   +K G          +I
Sbjct: 165 ELA-PYGVRCNVVSPGS-TDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEI 222

Query: 237 AMAALYLASDAAVH 250
           A A L+LASD A H
Sbjct: 223 ANAVLFLASDLASH 236

Length = 252

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 72.7 bits (179), Expect = 3e-15
 Identities = 69/248 (27%), Positives = 99/248 (39%), Gaps = 34/248 (13%)

Query: 16  LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
            +TG  SGIG   +L     G  +      +  L  A+AA    G    G   DV  R  
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLA-ALAAELGAGNAWTG-ALDVTDRAA 62

Query: 76  -AVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
               + +      G+LD+L N A     G F    ED+       VI+I+  G     H 
Sbjct: 63  WDAALADFAAATGGRLDVLFNNAGILRGGPF----EDIPLEAHDRVIDINVKGVLNGAHA 118

Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLALEW 187
           AL YLK         + G  +IN S+    +A + Q  +   SA K AV  +T +L LEW
Sbjct: 119 ALPYLKA--------TPGARVINTSSA---SAIYGQPGLAVYSATKFAVRGLTEALDLEW 167

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
              + IRV  + P  + DTA +      E+ + +T  +      E  D+A A       A
Sbjct: 168 R-RHGIRVADVMPLFV-DTAML-DGTSNEVDAGSTKRLGVRLTPE--DVAEAVW----AA 218

Query: 248 AVHRDLIH 255
             H   +H
Sbjct: 219 VQHPTRLH 226

Length = 260

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 72.5 bits (178), Expect = 4e-15
 Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 20/232 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEG 68
           L GK+AL+TG   GIG  I+LQLG+ GA + I GR     L      + + G   I +  
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60

Query: 69  DVRKREDAVRVVESTINHF-GKLDILVNAAAG-------NFLVPAEDLSPNGFRTVIEID 120
           D    ++   + E       G+LDILVN A             P  +  P  +  +  + 
Sbjct: 61  DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
               +     A   + K G+G         I+ IS +       + +     KAA+D + 
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGL--------IVIIS-STGGLEYLFNVAYGVGKAAIDRMA 171

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
             +A E    + + V  + PG ++ T  V ++  ++  S       A+  GE
Sbjct: 172 ADMAHEL-KPHGVAVVSLWPGFVR-TELVLEMPEDDEGSWHAKERDAFLNGE 221

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 71.8 bits (176), Expect = 6e-15
 Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 20/244 (8%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
           KV L+TG   GIG   ++     G ++ I   R          A+ + G  A  + GDV 
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE---DLSPNGFRTVIEIDSVGTFIMC 128
              D + + ++  + FG+LD LVN A    + P+    D+     R + + + +G ++  
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAG--IVAPSMPLADMDAARLRRMFDTNVLGAYLCA 120

Query: 129 HEALKYLK--KGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLAL 185
            EA + L   +GGR       GG I+N+S+      +  + +  + +K AVD++T  LA 
Sbjct: 121 REAARRLSTDRGGR-------GGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAK 173

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAALYLA 244
           E G    +RVN + PG I+     S   P    R  A   +   + GE  ++A   ++L 
Sbjct: 174 ELGPH-GVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLG--RAGEADEVAETIVWLL 230

Query: 245 SDAA 248
           SDAA
Sbjct: 231 SDAA 234

Length = 248

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 72.3 bits (178), Expect = 6e-15
 Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 12/178 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKV ++TG   GIG E++ +L   GA +A++   +  L +  A L       + +  D
Sbjct: 7   LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVAD 65

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V          E  +  FG +D++V NA   +       + P+ FR VI+++ +G F   
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGIASG-GSVAQVDPDAFRRVIDVNLLGVFHTV 124

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
              L  L             G ++ +S+   + A        A+KA V++   +L LE
Sbjct: 125 RATLPAL---------IERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLE 173

Length = 296

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 70.5 bits (173), Expect = 2e-14
 Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 17/190 (8%)

Query: 16  LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
           ++TG  SG+G  I+L+  + G  +A+    +      +  L   G        DVR    
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 76  AVRVVESTINHFGKLDILVN----AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
              + ++    +G +D++VN    A+ G F    E+LS   +   I I+ +G    C   
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGVASGGFF----EELSLEDWDWQIAINLMGVVKGCKAF 119

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
           L   K+   G+        I+NI++             + AKA V +++ +L +E   D 
Sbjct: 120 LPLFKRQKSGR--------IVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVEL-ADD 170

Query: 192 AIRVNGIAPG 201
            I V+ + P 
Sbjct: 171 EIGVHVVCPS 180

Length = 270

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 70.2 bits (172), Expect = 3e-14
 Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 16/201 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAI---MGRRKTVLRSAVAALHSLGIPAIG 65
           LKGKV L+ GG   +G  I+  L   GA A+AI       K      VAA+ + G  A+ 
Sbjct: 6   LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVA 65

Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
            + D+       ++ +     FG+ DI +N        P  ++S   +  +  ++S   F
Sbjct: 66  FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAF 125

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
               EA ++L   G+          I+ +  +L    T +    + +KA V+  TR+ + 
Sbjct: 126 FFIKEAGRHLNDNGK----------IVTLVTSLLGAFTPFYSAYAGSKAPVEHFTRAASK 175

Query: 186 EWGTDYAIRVNGIAPGPIKDT 206
           E+G    I V  + PGP+ DT
Sbjct: 176 EFG-ARGISVTAVGPGPM-DT 194

Length = 257

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 70.2 bits (172), Expect = 3e-14
 Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 25/253 (9%)

Query: 8   DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIG 65
           + +KGK  +++GG  GIG  I  +  + G  IA          + +A       GI A  
Sbjct: 4   NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKA 63

Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAA-------AGNFLVPAEDLSPNGFRTVIE 118
              ++ + E    + +     F ++D  ++ A        G +      L P G    I 
Sbjct: 64  YPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGY-TKFMRLKPKGLNN-IY 121

Query: 119 IDSVGTFIM-CHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAA 175
             +V  F++   EA K ++K G        GG II++S+T  L Y    Y  H   +KAA
Sbjct: 122 TATVNAFVVGAQEAAKRMEKVG--------GGSIISLSSTGNLVYIEN-YAGH-GTSKAA 171

Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
           V+++ +  A E G +  IRVN ++ GPI   A  +    EE+++K  +     + G+  D
Sbjct: 172 VETMVKYAATELG-EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPED 230

Query: 236 IAMAALYLASDAA 248
           +A A L+L S+ A
Sbjct: 231 LAGACLFLCSEKA 243

Length = 260

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 69.4 bits (170), Expect = 5e-14
 Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 19/242 (7%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA-VAALHSLGIPAIGLEGDVRK 72
           VA++TG   GIG  I+ +L   G  IAI         +  VA + + G  AI  + D+ +
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 73  REDAVRVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
             D   +++     FG+LD LVN A       G+ L    DL+ + F  +I I+  G F 
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLL----DLTEDSFDRLIAINLRGPFF 118

Query: 127 MCHE-ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
           +    A + +++  R      S   II +++   Y  +  +     +KA +   TR LA 
Sbjct: 119 LTQAVARRMVEQPDRFDGPHRS---IIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAY 175

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLA 244
               D  I V+ I PG I     ++    E+        +    ++G+  DIA A   LA
Sbjct: 176 RLA-DEGIAVHEIRPGLIH--TDMTAPVKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLA 232

Query: 245 SD 246
           S 
Sbjct: 233 SG 234

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 68.9 bits (169), Expect = 6e-14
 Identities = 56/195 (28%), Positives = 79/195 (40%), Gaps = 19/195 (9%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
            L+TG  SGIG  ++ +  K G  +A+  RR   L    A L +          DV   E
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 75  DAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
               V+       G LD+++ NA  G       DLS   FR  I+ + +G   +   AL 
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVG-KGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119

Query: 134 YLKKGGRGQASSSSGGIIINISATLHY----TATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +  GRG         ++ IS+         A  Y    SA+KAA+ S+  SL  +   
Sbjct: 120 QFRAKGRGH--------LVLISSVAALRGLPGAAAY----SASKAALSSLAESLRYDV-K 166

Query: 190 DYAIRVNGIAPGPIK 204
              IRV  I PG I 
Sbjct: 167 KRGIRVTVINPGFID 181

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 69.2 bits (170), Expect = 6e-14
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 24/159 (15%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG----IPAIGLE 67
           GKV ++TG  SGIG E + +L K GA + I  R +     A A +        +  I L+
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 68  ----GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
                 VR+        E  +  F +LDIL+N A    + P   L+ +GF     ++ +G
Sbjct: 61  LSSLASVRQ------FAEEFLARFPRLDILINNAGI--MAPPRRLTKDGFELQFAVNYLG 112

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162
            F++ +  L  LK         S+   I+N+S+  H   
Sbjct: 113 HFLLTNLLLPVLKA--------SAPSRIVNVSSIAHRAG 143

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 68.3 bits (167), Expect = 2e-13
 Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 11/211 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIGLEG 68
           L GKVA++TG  +G+G   +L L + GA + +      +  S V   + + G  A+ + G
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+ +R  A  +V + +   G LDI+VN A         ++S   +  VI +   G F++ 
Sbjct: 70  DISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLT 128

Query: 129 HEALKYLKKGGRGQASSSSG---GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
             A  Y     R +A ++ G   G I+N S+         Q +  AAKA + ++T S A 
Sbjct: 129 RNAAAYW----RAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAAR 184

Query: 186 EWGTDYAIRVNGIAP-GPIKDTAGVSKLAPE 215
             G  Y +R N I P      TA V   AP+
Sbjct: 185 ALGR-YGVRANAICPRARTAMTADVFGDAPD 214

Length = 306

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 45/196 (22%), Positives = 73/196 (37%), Gaps = 16/196 (8%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
           + L+TGGGSGIG  ++L+  K GA + I+   +         +   G      + DV KR
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 74  EDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
           E+     +      G + IL+N A    G  L    +L         E++++  F     
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGVVSGKKL---LELPDEEIEKTFEVNTLAHFWTTKA 117

Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE--WG 188
            L  + +   G         I+ I++     +        A+KAA      SL LE    
Sbjct: 118 FLPDMLERNHGH--------IVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAY 169

Query: 189 TDYAIRVNGIAPGPIK 204
               I+   + P  I 
Sbjct: 170 GKPGIKTTLVCPYFIN 185

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 66.3 bits (162), Expect = 5e-13
 Identities = 55/194 (28%), Positives = 78/194 (40%), Gaps = 13/194 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGK   + G   G+G+ ++    K GA + I  R +  L+     L   G     + GD
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVV-GD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   E A  V+E        +D LV    G      E+ S  G   ++           +
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFS--GLEEMLTNHIKIPLYAVN 119

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            +L++LK+G      SS  GI         Y A+  Q+  + AKA +      LA E   
Sbjct: 120 ASLRFLKEGSSIVLVSSMSGI---------YKASPDQLSYAVAKAGLAKAVEILASEL-L 169

Query: 190 DYAIRVNGIAPGPI 203
              IRVNGIAP  I
Sbjct: 170 GRGIRVNGIAPTTI 183

Length = 238

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 65.8 bits (161), Expect = 7e-13
 Identities = 53/214 (24%), Positives = 76/214 (35%), Gaps = 23/214 (10%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
            +V L+ GG   +G  +       G  +A +      L     A  S+ +          
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASID-----LAENEEADASIIVLDSDSF---- 51

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
             E A +VV S     GK+D L+  A G              +  + + +   +FI  H 
Sbjct: 52  -TEQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHL 110

Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GT 189
           A K+L  GG           ++   A      T   I   AAKAAV  +T+SLA E  G 
Sbjct: 111 ATKHLLSGGL----------LVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGL 160

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 223
                 N I P  + DT    K  P+   S  T 
Sbjct: 161 PAGSTANAILPVTL-DTPANRKAMPDADFSSWTP 193

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 19/249 (7%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGD 69
             +VA++ GGG  +G  +   L + G  +A+     +   + A       G  A G   D
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
               +  + + +     F ++D+LV +A         D     F   ++++ VG F+   
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAR 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           E  K + + G         G II I++      + +    SAAK     +T+SLAL+   
Sbjct: 121 EFSKLMIRDG-------IQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLA- 172

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAP----------EEIRSKATDYMAAYKFGEKWDIAMA 239
           ++ I VN +  G +  +     L P           E+     D +   +  +  D+   
Sbjct: 173 EHGITVNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNM 232

Query: 240 ALYLASDAA 248
            L+ AS  A
Sbjct: 233 LLFYASPKA 241

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 22/245 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+ AL+TG   GIG EI+  L   GA + + G R   L +  A    LG        +
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA---ELGERVKIFPAN 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +  R++   + +        +DILVN A     G F+     +S   + +V+E++   TF
Sbjct: 61  LSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFV----RMSDEDWDSVLEVNLTATF 116

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            +  E    + +   G+        IINI++ +  T    Q +  A+KA +   ++SLA 
Sbjct: 117 RLTRELTHPMMRRRYGR--------IINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQ 168

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           E  T   + VN +APG I ++A   KL  ++ +      +   + G   ++A A  YLAS
Sbjct: 169 EIATR-NVTVNCVAPGFI-ESAMTGKLNDKQ-KEAIMGAIPMKRMGTGAEVASAVAYLAS 225

Query: 246 DAAVH 250
             A +
Sbjct: 226 SEAAY 230

Length = 245

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 70/273 (25%), Positives = 108/273 (39%), Gaps = 71/273 (26%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TGG  GIG     +L + GA          V+ +A +    L      +  D
Sbjct: 7   LAGKRALVTGGTKGIGAATVARLLEAGA---------RVVTTARSRPDDLPEGVEFVAAD 57

Query: 70  VRKREDAVRVVESTINHFGKLDILVN------AAAGNFLVPAED-----LSPNGFRTVIE 118
           +   E    V  + +   G +DILV+      A AG F    ++     L+ N    V  
Sbjct: 58  LTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAV-R 116

Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS----------ATLHYTATWYQIH 168
           +D              L  G   + S    G+II+++          +T  Y        
Sbjct: 117 LDRA------------LLPGMIARGS----GVIIHVTSIQRRLPLPESTTAY-------- 152

Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 228
            +AAKAA+ + ++SL+ E      +RVN ++PG I+  A V+ LA     +  TDY  A 
Sbjct: 153 -AAAKAALSTYSKSLSKEVAPK-GVRVNTVSPGWIETEAAVA-LAERLAEAAGTDYEGAK 209

Query: 229 K-------------FGEKWDIAMAALYLASDAA 248
           +               E  ++A    +LASD A
Sbjct: 210 QIIMDSLGGIPLGRPAEPEEVAELIAFLASDRA 242

Length = 260

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 9/176 (5%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALHSLGIPAIGLEGDVRK 72
           VA + G G G+G  I+ +    G ++A+  RR+  L +  V  +   G  A  +  D R 
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
            ++ + + +      G L++LV  A  N   P  + +P  F  V E+ + G F+   EA 
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREAA 120

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
           K +   GRG         II   AT            + AK A+ ++ +S+A E G
Sbjct: 121 KRMLARGRGT--------IIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELG 168

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 64.5 bits (158), Expect = 3e-12
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 17/194 (8%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
             KVAL+TG  SGIG   + +L + G  +    R      +  A +   G+  + L  DV
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNP----ARAAPIP--GVELLEL--DV 54

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
                    V+  I   G++D+LVN A       AE+ S    + + + +  G   M   
Sbjct: 55  TDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRA 114

Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
            L +++  G G+        IINIS+ L +    Y    +A+K AV+  + SL  E    
Sbjct: 115 VLPHMRAQGSGR--------IINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQ- 165

Query: 191 YAIRVNGIAPGPIK 204
           + IRV+ + P   K
Sbjct: 166 FGIRVSLVEPAYTK 179

Length = 270

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 13/237 (5%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           + AL+TG   GIG  ++ +    G  +  +      L +   AL       +    D+  
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVAC--DLTD 60

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
                  + +     G +D+LV  A         D +P  +R    ++    + +C EA+
Sbjct: 61  AASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAY-LCVEAV 119

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
                         S G ++NI  +++  A       SAAKA +   T+ LA+E+G  + 
Sbjct: 120 -------LEGMLKRSRGAVVNI-GSVNGMAALGHPAYSAAKAGLIHYTKLLAVEYGR-FG 170

Query: 193 IRVNGIAPGPIKDTAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           IR N +APG +K  A  +++A   ++  +   +     F    D+A A L+LAS AA
Sbjct: 171 IRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAA 227

Length = 257

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 63.5 bits (155), Expect = 5e-12
 Identities = 61/260 (23%), Positives = 99/260 (38%), Gaps = 42/260 (16%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-------MGRRKTVLRSAVA-ALHSLGI 61
           LKGK  L+TG G  IG  +   + + G  +         +      L         SL  
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSL-- 59

Query: 62  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIE 118
               +E D+  +E     +  +   +GK+D  VN A     ++     D+S + F   + 
Sbjct: 60  ----VELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLS 115

Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL--------HYTATWYQ--IH 168
           +    +F+   +  KY KK G        GG ++NIS+           Y  T     + 
Sbjct: 116 LHLGSSFLFSQQFAKYFKKQG--------GGNLVNISSIYGVVAPKFEIYEGTSMTSPVE 167

Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 228
            +A KA +  +T+ LA  +  D  IRVN ++PG I D        PE   +         
Sbjct: 168 YAAIKAGIIHLTKYLAKYFK-DSNIRVNCVSPGGILDN------QPEAFLNAYKKCCNGK 220

Query: 229 KFGEKWDIAMAALYLASDAA 248
              +  DI    ++L SD +
Sbjct: 221 GMLDPDDICGTLVFLLSDQS 240

Length = 256

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 63.6 bits (155), Expect = 6e-12
 Identities = 65/218 (29%), Positives = 91/218 (41%), Gaps = 43/218 (19%)

Query: 10  LKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIM------GRRKTVLRSAVAALHSLGI 61
           L GK AL+TG      I + I+ QL   GA + I       GR +  +R     L+    
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN---- 59

Query: 62  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 113
           P++ L  DV+         E+    +GKLDILV+  A        G+F       S  GF
Sbjct: 60  PSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDF----SATSREGF 115

Query: 114 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----V 169
              +EI +     +C  A   + +GG          I+     TL Y      I     +
Sbjct: 116 ARALEISAYSLAPLCKAAKPLMSEGG---------SIV-----TLTYLGGVRAIPNYNVM 161

Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
             AKAA+++  R LA E G    IRVN I+ GPI+  A
Sbjct: 162 GVAKAALEASVRYLAAELGPK-NIRVNAISAGPIRTLA 198

Length = 258

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 63.0 bits (154), Expect = 9e-12
 Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 35/260 (13%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M    K D+LK ++ L+TG G GIG E +L   +HGA + ++GR +  L +    + + G
Sbjct: 1   MHYQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG 60

Query: 61  I--PAI---GLEGDVRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFR 114
              PAI    L       ++  ++ ++    FG+LD +L NA     L P E   P  ++
Sbjct: 61  GPQPAIIPLDLLT--ATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQ 118

Query: 115 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAK 173
            V++++   TF++    L  L K       S +  ++   S+      A W    VS  K
Sbjct: 119 DVMQVNVNATFMLTQALLPLLLK-------SPAASLVFTSSSVGRQGRANWGAYAVS--K 169

Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK---ATDYMAAYKF 230
            A + + + LA E+     +RVN I PG  + TA  +   P E   K     D M  Y  
Sbjct: 170 FATEGMMQVLADEY-QGTNLRVNCINPGGTR-TAMRASAFPGEDPQKLKTPEDIMPLY-- 225

Query: 231 GEKWDIAMAALYLASDAAVH 250
                     LYL  D +  
Sbjct: 226 ----------LYLMGDDSRR 235

Length = 247

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 62.7 bits (153), Expect = 9e-12
 Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 19/194 (9%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR- 73
            L+TG   GIG E+  QL   G    I   R     + +AAL +       LE DV    
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 74  EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
            ++   V   +     LD+L+ NA   +   PA ++       V +++ +G  ++    L
Sbjct: 61  AESAEAVAERL-GDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFL 119

Query: 133 KYLKKGGRGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
             L KG R          IINIS+       + +  WY    S  KAA++ +T+SLA+E 
Sbjct: 120 PLLLKGAR--------AKIINISSRVGSIGDNTSGGWYSYRAS--KAALNMLTKSLAVEL 169

Query: 188 GTDYAIRVNGIAPG 201
             D  I V  + PG
Sbjct: 170 KRD-GITVVSLHPG 182

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 18/204 (8%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSL 59
           +L G+V ++TG G GIG   +L     GA + +              +  ++ V  + + 
Sbjct: 3   LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA 62

Query: 60  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTV 116
           G  A+    D+   + A  +V++ +  FG LD+LVN A       +    ++S   +  V
Sbjct: 63  GGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIA---NMSEEEWDAV 119

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
           I +   G F     A  Y +     +A  +    IIN S+      +  Q + SAAKA +
Sbjct: 120 IAVHLKGHFATLRHAAAYWR--AESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGI 177

Query: 177 DSITRSLALEWGTDYAIRVNGIAP 200
            ++T   A E G  Y + VN IAP
Sbjct: 178 AALTLVAAAELGR-YGVTVNAIAP 200

Length = 286

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
           +     AL+TG  SGIG   +L   K G  +A++ R +  L +  A L S G+ A     
Sbjct: 3   LNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSI 62

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+   E     +   +  FG  D+L+N A   +  P  ++  + ++ VI+++    F  C
Sbjct: 63  DLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCC 122

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TW--YQIHVSAAKAAVDSITRSLA 184
              L  ++           GG+IIN+S+     A   W  Y      +KAA+ + T+ LA
Sbjct: 123 SAVLPGMRA--------RGGGLIINVSSIAARNAFPQWGAY----CVSKAALAAFTKCLA 170

Query: 185 LEWGTDYAIRVNGIAPG----PIKDTAGV 209
            E    + IRV  I  G    P+ DT  V
Sbjct: 171 EE-ERSHGIRVCTITLGAVNTPLWDTETV 198

Length = 241

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 61.5 bits (149), Expect = 3e-11
 Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 37/225 (16%)

Query: 8   DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AI 64
             L  K  L+TG   G+G +++      GA + ++ R +  L     A+   G P   AI
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAI 61

Query: 65  GLE----GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE-- 118
             +     +    + A  + E+T    GKLD +V+ A   +      LSP  F+TV E  
Sbjct: 62  RFDLMSAEEKEFEQFAATIAEATQ---GKLDGIVHCAGYFYA-----LSPLDFQTVAEWV 113

Query: 119 ----IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
               I++V    +       LK+      S  +  I +  S      A W      A+KA
Sbjct: 114 NQYRINTVAPMGLTRALFPLLKQ------SPDASVIFVGESHGETPKAYWGGF--GASKA 165

Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 219
           A++ + +  A EW     +R N + PGPI         +P+ I+S
Sbjct: 166 ALNYLCKVAADEWERFGNLRANVLVPGPIN--------SPQRIKS 202

Length = 239

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 60.2 bits (146), Expect = 9e-11
 Identities = 58/247 (23%), Positives = 93/247 (37%), Gaps = 30/247 (12%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL--RSAVAALHSLGIPAIGLEGDVRK 72
            ++TG   GIG  ++  L + GA +  +     +L        L  L         DV  
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPL---------DVAD 51

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
                 V    +   G +D LVN A        + LS   +     ++  G F +     
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
            ++K            G I+ +++   +          A+KAA+ S+++ L LE    Y 
Sbjct: 112 PHMKDRR--------TGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELA-PYG 162

Query: 193 IRVNGIAPGPIKDTAGVSKLAPEE------IRSKATDY---MAAYKFGEKWDIAMAALYL 243
           +R N ++PG   DTA    L  +E      I      +   +   K  +  DIA A L+L
Sbjct: 163 VRCNVVSPGS-TDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFL 221

Query: 244 ASDAAVH 250
           ASD A H
Sbjct: 222 ASDQAGH 228

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 23/196 (11%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KVAL+TG  SGIG   + +L   G  +    RR       +  L SLG+  + L  DV  
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRV----DKMEDLASLGVHPLSL--DVTD 57

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
                  V++ I   G++D+LVN A        ED+  +  R   E++  G   +    L
Sbjct: 58  EASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVL 117

Query: 133 KYLKKGGRGQASSSSGGIIINISAT----LHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            +++    G+        IINIS+           WY     A K A++  + +L LE  
Sbjct: 118 PHMRAQRSGR--------IINISSMGGKIYTPLGAWYH----ATKFALEGFSDALRLEVA 165

Query: 189 TDYAIRVNGIAPGPIK 204
             + I V  I PG IK
Sbjct: 166 -PFGIDVVVIEPGGIK 180

Length = 273

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 16/180 (8%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDV 70
           G  A++TG   GIG   + +L K G  + ++ R +  L +    +    G+    +  D 
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 71  RKREDAVRVVESTINHFGKLDI--LVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFI 126
              +D    +E  +     LDI  LVN    +  +P    +   +  + +I ++ + T  
Sbjct: 61  SAGDDIYERIEKELEG---LDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLK 117

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           M    L  + K  +        G I+NIS+      T      SA+KA +D  +R+L  E
Sbjct: 118 MTRLILPGMVKRKK--------GAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEE 169

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 25/241 (10%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVR 71
           K  L+TG  SGIG   + +  K GA + + GRR   L+     L +   +  + L+ DV 
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 72  KREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
            RE     +E+    F  +DILVN A    G  L PA++     + T+I+ +  G   + 
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALG--LDPAQEADLEDWETMIDTNVKGLLNVT 118

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEW 187
              L  +    +G         IIN+ +    Y      ++  A KAAV   + +L  + 
Sbjct: 119 RLILPIMIARNQGH--------IINLGSIAGRYPYAGGNVY-CATKAAVRQFSLNLRKDL 169

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW---DIAMAALYLA 244
                IRV  I PG ++    + +   ++ ++        Y+  E     DIA   L++A
Sbjct: 170 -IGTGIRVTNIEPGLVETEFSLVRFHGDKEKADKV-----YEGVEPLTPEDIAETILWVA 223

Query: 245 S 245
           S
Sbjct: 224 S 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 59.5 bits (144), Expect = 1e-10
 Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 16  LLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
           L+TG   GIG  I+ +L   G  I +     ++   S V+A+ + G  A  L+ DV  R 
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 75  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA--- 131
               ++E+ I   G    +V  A          LS   +  VI  +  G + + H     
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMP 121

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
           +   ++GGR    +S  G++ N            Q++ SAAKA +   T++LA+E     
Sbjct: 122 MIRARQGGRIITLASVSGVMGNRG----------QVNYSAAKAGLIGATKALAVELAKR- 170

Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            I VN IAPG I DT  ++++  E    +A   +   + G+  ++A  A +L SD A
Sbjct: 171 KITVNCIAPGLI-DTEMLAEV--EHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGA 224

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 40/234 (17%)

Query: 4   PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA 63
           P +   L GK  LLTG  SGIG   + Q  + GA +  + RR+ +L +    +   G  A
Sbjct: 32  PRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDA 91

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
           + +  D+   +    +V       G +DIL+N A  +   P  + S + +      D   
Sbjct: 92  MAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAE-SLDRWH-----DVER 145

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW------------YQIHVSA 171
           T ++ + A   L +G          G IIN+       ATW            Y     A
Sbjct: 146 TMVLNYYAPLRLIRGLAPGMLERGDGHIINV-------ATWGVLSEASPLFSVYN----A 194

Query: 172 AKAAVDSITRSLALEWG-------TDY--AIRVNGIAPGPIKDTAGVSKLAPEE 216
           +KAA+ +++R +  EWG       T Y   +    IA  P K   G+  L  +E
Sbjct: 195 SKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA--PTKAYDGLPALTADE 246

Length = 293

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 27/88 (30%), Positives = 42/88 (47%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKV L+TG  SGIG   ++++ + GA + ++ R    L   VA + + G  A     D
Sbjct: 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCD 428

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA 97
           +         V+  +   G +D LVN A
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNA 456

Length = 657

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 22/196 (11%)

Query: 12  GKVALLTGGGSGIGF---EISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
            KV  +TG   G G    E +L+ G    A A    R T   + +A  +   +  + L  
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATA----RDTATLADLAEKYGDRLLPLAL-- 56

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV  R      VE+ + HFG+LDI+VN A        E+++ +  R  I+ +  G   + 
Sbjct: 57  DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVT 116

Query: 129 HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
              L YL++   G     SS GGI     + ++           A+K A++ ++ +LA E
Sbjct: 117 QAVLPYLREQRSGHIIQISSIGGISAFPMSGIY----------HASKWALEGMSEALAQE 166

Query: 187 WGTDYAIRVNGIAPGP 202
              ++ I+V  + PG 
Sbjct: 167 -VAEFGIKVTLVEPGG 181

Length = 275

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 47/216 (21%), Positives = 81/216 (37%), Gaps = 21/216 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKV  +TGG  GIG   +  L   GA +AI    + + +   A L       +G   D
Sbjct: 3   LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLD 58

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V         +++     G +D+LVN A    + P  D      R +++++  G  +   
Sbjct: 59  VTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSK 118

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A   +   GRG         ++N+++              A+K AV   T +  LE   
Sbjct: 119 LAAPRMVPRGRGH--------VVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELR- 169

Query: 190 DYAIRVNGIAPG--------PIKDTAGVSKLAPEEI 217
              + V+ + P               G   + PE++
Sbjct: 170 GTGVHVSVVLPSFVNTELIAGTGGAKGFKNVEPEDV 205

Length = 273

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 19/199 (9%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           K   +TG  SGIG E +L   ++G  + +    +  L +  A L +  + A  L  DV  
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGAL--DVTD 58

Query: 73  RED-AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
           R   A  + +      G+LD L N A      P ED+       +++I+  G     + A
Sbjct: 59  RAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAA 118

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLALEWG 188
           L YLK         + G  +IN +++   +A + Q  +   SA K AV  +T +L +EW 
Sbjct: 119 LPYLKA--------TPGARVINTASS---SAIYGQPDLAVYSATKFAVRGLTEALDVEW- 166

Query: 189 TDYAIRVNGIAPGPIKDTA 207
             + IRV  + P  + DT 
Sbjct: 167 ARHGIRVADVWPWFV-DTP 184

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 58.0 bits (141), Expect = 5e-10
 Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 23/197 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K  LLTG   GIG  ++  L   GA + ++GR    L  A+AA          +  D
Sbjct: 3   LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE-ALAARLPYPGRHRWVVAD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   E     V +     G +++L+N A  N     ED  P     ++ ++      +  
Sbjct: 62  LTS-EAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTR 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLH------YTATWYQIHVSAAKAAVDSITRSL 183
             L  L+             +++N+ +T        Y +  Y     A+K A+   + +L
Sbjct: 121 ALLPLLRAQPS--------AMVVNVGSTFGSIGYPGYAS--Y----CASKFALRGFSEAL 166

Query: 184 ALEWGTDYAIRVNGIAP 200
             E   D  +RV  +AP
Sbjct: 167 RREL-ADTGVRVLYLAP 182

Length = 263

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 58.5 bits (142), Expect = 5e-10
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 3/96 (3%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             GKVA++TG  SG G   +      G  + +   ++  L  AVA L + G   +G+  D
Sbjct: 4   FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA---AGNFL 102
           V        + ++ +  FG + +L N A   AG  +
Sbjct: 64  VSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLV 99

Length = 287

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.7 bits (140), Expect = 6e-10
 Identities = 59/246 (23%), Positives = 93/246 (37%), Gaps = 37/246 (15%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
              K  L+TG  SGIG   +      GA    +  + K  L      L          + 
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFL----------QL 52

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFL---VPAEDLSPNGFRTVIEIDSVGTF 125
           D+         +E   +    +DIL N A    L    P  D S   ++ + + +   TF
Sbjct: 53  DLSDD------LEPLFDWVPSVDILCNTAG--ILDDYKPLLDTSLEEWQHIFDTNLTSTF 104

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
           ++    L  + +   G        IIIN+ +   + A       +A+K A+   T+ LAL
Sbjct: 105 LLTRAYLPQMLERKSG--------IIINMCSIASFVAGGGGAAYTASKHALAGFTKQLAL 156

Query: 186 EWGTDYA---IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
               DYA   I+V GIAPG +K     +   P  +           ++ E  ++A   L+
Sbjct: 157 ----DYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLF 212

Query: 243 LASDAA 248
           LAS  A
Sbjct: 213 LASGKA 218

Length = 235

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.5 bits (139), Expect = 7e-10
 Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 27/252 (10%)

Query: 10  LKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIM-----------GRRKTVLRSAVAAL 56
           LK KVA++TG     GIG  I  +L + GA I              G  +         L
Sbjct: 4   LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEEL 63

Query: 57  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
              G+    +E D+ + +    ++       G   ILVN AA +      +L+       
Sbjct: 64  LKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKH 123

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
             ++   T ++  +  +   K         SGG IIN+++         ++  +A K A+
Sbjct: 124 YMVNVRATTLLSSQFARGFDKK--------SGGRIINMTSGQFQGPMVGELAYAATKGAI 175

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           D++T SLA E      I VN I PGP  DT  ++    EEI+          + GE  D 
Sbjct: 176 DALTSSLAAEVAH-LGITVNAINPGP-TDTGWMT----EEIKQGLLPMFPFGRIGEPKDA 229

Query: 237 AMAALYLASDAA 248
           A    +LAS+ A
Sbjct: 230 ARLIKFLASEEA 241

Length = 256

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 34/254 (13%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEG 68
           L GK  L+TG   GIG   +      G  + ++ R    L +  A L +  G+       
Sbjct: 5   LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRTVIEIDSVGTF 125
           D+   E   ++        G +DILVN A     +P    +D+    +R   E+   G  
Sbjct: 65  DLSSPEAREQLAAEA----GDIDILVNNAGA---IPGGGLDDVDDAAWRAGWELKVFGYI 117

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINI--SATLHYTATWYQIHVSAAKAAVDSITRSL 183
            +   A   +K   RG       G+I+N+  +A  +  A +  I  SA  AA+ + TR+L
Sbjct: 118 DLTRLAYPRMK--ARG------SGVIVNVIGAAGENPDADY--ICGSAGNAALMAFTRAL 167

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR------SKATDYMAAYKFG---EKW 234
             +   D  +RV G+ PGP+  T  +  L     R      S+  + +A    G      
Sbjct: 168 GGK-SLDDGVRVVGVNPGPVA-TDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPE 225

Query: 235 DIAMAALYLASDAA 248
           ++A    +LAS  +
Sbjct: 226 EVADLVAFLASPRS 239

Length = 259

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 56.5 bits (136), Expect = 2e-09
 Identities = 38/134 (28%), Positives = 63/134 (47%)

Query: 8   DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
           D   G+ A++TGG SGIG     +  + GA + +    K  LR AV  L + G    G+ 
Sbjct: 2   DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVM 61

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            DVR RE+   + +      G +D++ + A      P  +++ + +R VI++D  G+   
Sbjct: 62  CDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHT 121

Query: 128 CHEALKYLKKGGRG 141
               L  L + G G
Sbjct: 122 VEAFLPRLLEQGTG 135

Length = 275

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 24/199 (12%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGR--RKTVLRSAVAALHSLG-IPAIGL 66
             K+A++TG  SG G   +L+L K G   IA M    ++  L S    L+    I    L
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL 61

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVN---AAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             DV   ++++   +  +   G++D+LVN    A G F    E++    +R   E +  G
Sbjct: 62  --DVTD-QNSIHNFQLVLKEIGRIDLLVNNAGYANGGF---VEEIPVEEYRKQFETNVFG 115

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKAAVDSITRS 182
              +    L Y++K           G IINIS+            +VS +K A++  + S
Sbjct: 116 AISVTQAVLPYMRK--------QKSGKIINISSISGRVGFPGLSPYVS-SKYALEGFSES 166

Query: 183 LALEWGTDYAIRVNGIAPG 201
           L LE    + I V  I PG
Sbjct: 167 LRLEL-KPFGIDVALIEPG 184

Length = 280

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 27/252 (10%)

Query: 10  LKGKVALLTGG--GSGIGFEISLQLGKHGAAI---------AIMGRRKTVLRSAV--AAL 56
           L  K+AL+TG    +GIG  +  +L   G  I           M          +    +
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 57  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
            S G+    +E D+ +     RV  +     G   IL+N AA +     E+L+       
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKH 122

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
             ++   T ++     K        Q    +GG IIN+++         ++  +A K A+
Sbjct: 123 YAVNVRATMLLSSAFAK--------QYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAI 174

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           ++ T+SLA E   +  I VN + PGP  DT  ++    EE++          + GE  D 
Sbjct: 175 EAFTKSLAPELA-EKGITVNAVNPGPT-DTGWIT----EELKHHLVPKFPQGRVGEPVDA 228

Query: 237 AMAALYLASDAA 248
           A    +L S+ A
Sbjct: 229 ARLIAFLVSEEA 240

Length = 256

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)

Query: 13  KVALLTGGGSGIGFEISLQLG----KHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
            V L+TG  SGIG  ++++L     K     A M   K   R   AA    G     L+ 
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV   +     VE        +D+LV  A    L P E LS +   +V +++  GT  M 
Sbjct: 61  DVCDSKSVAAAVERVTE--RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRML 118

Query: 129 HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
              L  +K+ G G+   +SS GG+       L +   +      A+K A++ +  SLA++
Sbjct: 119 QAFLPDMKRRGSGRILVTSSVGGL-----QGLPFNDVY-----CASKFALEGLCESLAVQ 168

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATD 223
               + + ++ I  GP+  TA + K+  +PEE+  +  D
Sbjct: 169 L-LPFNVHLSLIECGPVH-TAFMEKVLGSPEEVLDRTAD 205

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 37/204 (18%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIGLEGDVR 71
           + AL+TG    IG  I+L L  HG  +A+   R      A+AA + +LG  A+ L+ D+ 
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLA 69

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
              +   +V       G + +LVN A+      A   +   +   +  +    F++    
Sbjct: 70  DEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAF 129

Query: 132 LKYLKKGGRGQASSSSGGIIINI-------------SATLHYTATWYQIHVSAAKAAVDS 178
            + L    R        G+++N+             S TL             +KAA+ +
Sbjct: 130 ARALPADAR--------GLVVNMIDQRVWNLNPDFLSYTL-------------SKAALWT 168

Query: 179 ITRSLALEWGTDYAIRVNGIAPGP 202
            TR+LA        IRVN I PGP
Sbjct: 169 ATRTLAQALAPR--IRVNAIGPGP 190

Length = 258

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 54.5 bits (132), Expect = 4e-09
 Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 34/217 (15%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
            ++ G    IG  ++  L  HG  +   GR             S G   +    D+    
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGR-------------SSGDYQV----DITDEA 43

Query: 75  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
               + E      G  D +V+ A      P  +L+   F+  +    +G   +    L Y
Sbjct: 44  SIKALFEKV----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLPY 99

Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
           L          + GG I   S  L           +    A++   R+ A+E      IR
Sbjct: 100 L----------NDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG--IR 147

Query: 195 VNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMAAYKF 230
           +N ++PG ++++        P      A D   AY  
Sbjct: 148 INAVSPGVVEESLEAYGDFFPGFEPVPAEDVAKAYVR 184

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 54.7 bits (132), Expect = 6e-09
 Identities = 56/223 (25%), Positives = 88/223 (39%), Gaps = 32/223 (14%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEG 68
             G   L+TGG SGIG  ++ +  + G  + I GR +  L  A A       P I     
Sbjct: 3   TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE-----NPEIHTEVC 57

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--PNGFRTV---IEIDSVG 123
           DV  R+    +VE     +  L++L+N A    +   EDL+   +        I  + + 
Sbjct: 58  DVADRDSRRELVEWLKKEYPNLNVLINNAG---IQRNEDLTGAEDLLDDAEQEIATNLLA 114

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
              +    L +L +             IIN+S+ L +          A KAA+ S T +L
Sbjct: 115 PIRLTALLLPHLLR--------QPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLAL 166

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 226
             E   D ++ V  +AP P+ DT         E  ++A   M 
Sbjct: 167 R-EQLKDTSVEVIELAP-PLVDT--------TEGNTQARGKMP 199

Length = 245

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 54.5 bits (131), Expect = 7e-09
 Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 21/241 (8%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           G+VAL+TG   GIG  I+  L   G    +A + R +    S VA   +LG  A  +  D
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG---SKVAK--ALGENAWFIAMD 64

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           V         V   +  FG+LD LV NAA  +      E LS   +  V+ ++  G  ++
Sbjct: 65  VADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLL 124

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
                 YL+         +  G I+N+++T    +       +A+K  + ++T +LA+  
Sbjct: 125 AKHCAPYLR---------AHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISL 175

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
           G +  IRVN ++PG I D    S+   E +         A + G   D+A    +L S  
Sbjct: 176 GPE--IRVNAVSPGWI-DARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQ 232

Query: 248 A 248
           A
Sbjct: 233 A 233

Length = 255

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 54.5 bits (131), Expect = 8e-09
 Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 20/205 (9%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLEGDVR 71
            A++TG    IG  I++ L + G  + +   R     S +AA  +   P  A+  + D+ 
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 72  KREDAVRVVESTIN----HFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEI----- 119
                    E+ I+     FG+ D+LVN A+  +   L+  +     G +  +E+     
Sbjct: 63  NSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122

Query: 120 ---DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
              +++  + +  +A    + G R +  S++  I+    A        + ++ + AK A+
Sbjct: 123 FGSNAIAPYFLI-KAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMY-TMAKHAL 180

Query: 177 DSITRSLALEWGTDYAIRVNGIAPG 201
           + +TRS ALE      IRVNG+APG
Sbjct: 181 EGLTRSAALELAP-LQIRVNGVAPG 204

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 54.2 bits (131), Expect = 9e-09
 Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 24/222 (10%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAI--AIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           V +LTG   GIG  ++ +L K G+     ++ R +  L+     L   G+    ++ D+ 
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRP-GLRVTTVKADLS 59

Query: 72  KREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
                 +++E+     G+ D+L+ NA +   +   E +  +  +   +++      +   
Sbjct: 60  DAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTST 119

Query: 131 ALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            L+  KK             ++N+S  A ++    W      ++KAA D   R LA E  
Sbjct: 120 LLRAFKK-------RGLKKTVVNVSSGAAVNPFKGW--GLYCSSKAARDMFFRVLAAE-- 168

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 230
            +  +RV   APG + DT         EIR  + D     +F
Sbjct: 169 -EPDVRVLSYAPGVV-DTDMQR-----EIRETSADPETRSRF 203

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 54.5 bits (132), Expect = 9e-09
 Identities = 56/207 (27%), Positives = 80/207 (38%), Gaps = 27/207 (13%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-----RKTVLRSAVAALHSLGIPAIGL 66
            K  L+TG  SG G  ++       AA+A   R     R    R+   ALH     A+  
Sbjct: 4   MKTWLITGVSSGFGRALA------QAALAAGHRVVGTVRSEAARADFEALH--PDRALAR 55

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
             DV   +    VV      FG +D+LVN A        E+      R   E++  G   
Sbjct: 56  LLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVA 115

Query: 127 MCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           M    L  ++   RG     +S GG+I       +Y  +         K A++ I+ SLA
Sbjct: 116 MTKAVLPGMRARRRGHIVNITSMGGLITM-PGIGYYCGS---------KFALEGISESLA 165

Query: 185 LEWGTDYAIRVNGIAPGPIK-DTAGVS 210
            E    + I V  + PG  + D AG S
Sbjct: 166 KEVA-PFGIHVTAVEPGSFRTDWAGRS 191

Length = 277

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 12/204 (5%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
           AL+ G  SGIG   +++L   G  +A+  RR       V  + + G  A+    DV   +
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72

Query: 75  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
                V       G++++LV+ A   +     ++S   F + ++I  VG   +    L  
Sbjct: 73  SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP- 131

Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GTDYAI 193
                 G      G +I   S            +  AAKA ++++  +L +E  GT   +
Sbjct: 132 ------GMIERRRGDLIFVGSDVALRQRPHMGAYG-AAKAGLEAMVTNLQMELEGT--GV 182

Query: 194 RVNGIAPGPIKDTAGVSKLAPEEI 217
           R + + PGP     G S L  E I
Sbjct: 183 RASIVHPGPTLTGMGWS-LPAEVI 205

Length = 274

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 53.7 bits (130), Expect = 1e-08
 Identities = 61/219 (27%), Positives = 83/219 (37%), Gaps = 36/219 (16%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           +KGKV L+TG   GIG     QL   GAA      R      +V  L    +P   L+ D
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP---ESVTDLGPRVVP---LQLD 57

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTFIM 127
           V          E        + ILVN  AG F   +   +   +  R  +E +  G   M
Sbjct: 58  VTDPASVAAAAE----AASDVTILVN-NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV----SAAKAAVDSITRSL 183
                  L   G        GG I+N+        +W         SA+KAA  S+T++L
Sbjct: 113 ARAFAPVLAANG--------GGAIVNV----LSVLSWVNFPNLGTYSASKAAAWSLTQAL 160

Query: 184 ALEWGTDYAIRVNGIAPGPIKDT-----AGVSKLAPEEI 217
             E       RV G+ PGPI DT         K +P ++
Sbjct: 161 RAELA-PQGTRVLGVHPGPI-DTDMAAGLDAPKASPADV 197

Length = 238

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 44/207 (21%), Positives = 68/207 (32%), Gaps = 54/207 (26%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
            L+TGG  GIG  I+  L   G+                                     
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGS------------------------------------- 23

Query: 75  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
             V VV        + D++V+ AA        DL+ +     I  + VGT  +   A + 
Sbjct: 24  PKVLVVS-------RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAAREL 76

Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
           +K    G+         I IS+             +A+KAA+D + +  A E G    + 
Sbjct: 77  MKAKRLGR--------FILISSVAGLFGAPGLGGYAASKAALDGLAQQWASE-GWGNGLP 127

Query: 195 VNGIAPGPIKDTAGVS-KLAPEEIRSK 220
              +A G    +      +APEEI   
Sbjct: 128 ATAVACGTWAGSGMAKGPVAPEEILGN 154

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 51.9 bits (124), Expect = 3e-08
 Identities = 32/88 (36%), Positives = 51/88 (57%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVA++TGGG GIG   +L L K GA + +    +   ++ V  + +LG  A+ +  D
Sbjct: 14  LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYD 73

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA 97
           + K+ D  RV+  T+N F ++D+L   A
Sbjct: 74  MEKQGDWQRVISITLNAFSRIDMLFQNA 101

Length = 169

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 52.3 bits (125), Expect = 4e-08
 Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 12/235 (5%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           ++A +TGG  GIG  I  +L K G   +A  G         +    +LG   I  EG+V 
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVG 63

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
             +      +      G++D+LVN A     V    ++   +  VI+ +    F +  + 
Sbjct: 64  DWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQV 123

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
           +  + + G G+        IINIS+       + Q + S AKA +   T SLA E  T  
Sbjct: 124 IDGMVERGWGR--------IINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATK- 174

Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
            + VN ++PG I     + K    ++  K    +   + G   +I     +LAS+
Sbjct: 175 GVTVNTVSPGYI--GTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASE 227

Length = 246

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK A++TGG SG+G E +  L + GA + +  RR  V R A+A +  + +  + L   
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADL 83

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA 98
              R  A R ++S      ++DIL+N A 
Sbjct: 84  ESVRAFAERFLDSG----RRIDILINNAG 108

Length = 315

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 5e-08
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA-ALHSLGIPAIGLEG 68
          L GK AL+TG   GIG + +  L   GA + +  R+K    + V   + + G  A  +  
Sbjct: 4  LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGA 63

Query: 69 DVRKREDAVRVVESTINHFGKLDILV-NAAAG 99
          D+   E    ++++    FG LD LV NA+ G
Sbjct: 64 DLTDEESVAALMDTAREEFGGLDALVLNASGG 95

Length = 248

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 21/137 (15%)

Query: 78  RVVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 135
            V ES    FG +DILV++ A    V  P  + S  G+   I   S     +       +
Sbjct: 109 EVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIM 168

Query: 136 KKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTD 190
             GG               S +L Y A+      Y   +S+AKAA++S TR LA E G  
Sbjct: 169 NPGGA--------------SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRK 214

Query: 191 YAIRVNGIAPGPIKDTA 207
           Y IRVN I+ GP+   A
Sbjct: 215 YKIRVNTISAGPLGSRA 231

Length = 303

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 52/228 (22%), Positives = 85/228 (37%), Gaps = 24/228 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEG 68
           +K K  L+TG   GIG      L  HGA       R      + A L +     +  L  
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDP---GSAAHLVAKYGDKVVPLRL 57

Query: 69  DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           DV   E     +++       +D+++ NA         E+ +    +  ++++  G   +
Sbjct: 58  DVTDPES----IKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRL 113

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
                  LK  G G         I+N+++             SA+K+A  S+T+ L  E 
Sbjct: 114 AQAFAPVLKANGGGA--------IVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAEL 165

Query: 188 GTDYAIRVNGIAPGPIKDT-----AGVSKLAPEEIRSKATDYMAAYKF 230
                  V  + PGPI DT     AG  K +PE +       + A +F
Sbjct: 166 A-AQGTLVLSVHPGPI-DTRMAAGAGGPKESPETVAEAVLKALKAGEF 211

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 29/191 (15%)

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEIDS 121
           DVR+      V       +G+LD L+++ A     P EDL       S  GF   +++ S
Sbjct: 68  DVREPGQLEAVFARIAEEWGRLDFLLHSIA---FAPKEDLHGRVVDCSREGFALAMDV-S 123

Query: 122 VGTFI-MCHEALKYLKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAAVDS 178
             +FI M   A   +  GG     S  G   ++ N           Y + +   KAA++S
Sbjct: 124 CHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN-----------YNL-MGPVKAALES 171

Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIA 237
             R LA E G    IRV+ I+PGP+K T   S +   + +   A +     +  +  D+ 
Sbjct: 172 SVRYLAAELG-PKGIRVHAISPGPLK-TRAASGIDDFDALLEDAAERAPLRRLVDIDDVG 229

Query: 238 MAALYLASDAA 248
             A +LASDAA
Sbjct: 230 AVAAFLASDAA 240

Length = 258

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 33/204 (16%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
           + L+TG  +G G  I+ +  + G  +   GRR+  L+        LG      + DVR R
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD---ELGDNLYIAQLDVRNR 58

Query: 74  EDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
                ++ S    +  +D+LVN A     L PA   S   + T+I+ ++ G   M    L
Sbjct: 59  AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATW-------YQIHVSAAKAAVDSITRSLAL 185
             + +   G         IINI +T     +W       Y     A KA V    R  +L
Sbjct: 119 PGMVERNHGH--------IINIGST---AGSWPYAGGNVY----GATKAFV----RQFSL 159

Query: 186 EWGTDY---AIRVNGIAPGPIKDT 206
              TD    A+RV  I PG +  T
Sbjct: 160 NLRTDLHGTAVRVTDIEPGLVGGT 183

Length = 248

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 57/231 (24%), Positives = 86/231 (37%), Gaps = 23/231 (9%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           GK+ ++TG GSGIG E +L   + GA +      +         + + G  A     DV 
Sbjct: 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVS 374

Query: 72  KREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
             +      E      G  DI+VN A    AG FL    D S   +  V++++ +   I 
Sbjct: 375 DADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFL----DTSAEDWDRVLDVN-LWGVIH 429

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
                      GR      +GG I+N+++   Y  +      + +KAAV  ++  L  E 
Sbjct: 430 GCRLF------GRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAEL 483

Query: 188 GTDYAIRVNGIAPG----PIKDT---AGVSKLAPEEIRSKATDYMAAYKFG 231
                I V  I PG     I  T   AG         R +A        +G
Sbjct: 484 A-AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYG 533

Length = 582

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 25/196 (12%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
             AL+TG   GIG  I+ +L      +   GR    L    A L      A     D+  
Sbjct: 4   PTALITGASRGIGAAIARELAPTHTLLL-GGRPAERLDELAAELPG----ATPFPVDLTD 58

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
            E     + + +   G+LD+LV+ A    L P  + + + +R  +E++ V    +    L
Sbjct: 59  PEA----IAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLL 114

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATW--YQIHVSAAKAAVDSITRSLALEWGTD 190
             L +   G        + IN  A L     W  Y    +A+K A+ ++  +L  E    
Sbjct: 115 PAL-RAAHGHV------VFINSGAGLRANPGWGSY----AASKFALRALADALREEEPG- 162

Query: 191 YAIRVNGIAPGPIKDT 206
             +RV  + PG   DT
Sbjct: 163 -NVRVTSVHPGRT-DT 176

Length = 227

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 7e-07
 Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 26/233 (11%)

Query: 16  LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
           L+ GG SGIG  ++      GA + I  R +  L +A  AL   G P      D+   E 
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDIT-DEA 58

Query: 76  AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 135
           AV   ++     G  D +V  AA     P   L     +  ++    G       A +  
Sbjct: 59  AV---DAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWG-------AYRVA 108

Query: 136 KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV 195
           +      A  + GG +  +S       +   +   A  AA++++ R LALE      +RV
Sbjct: 109 R-----AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA---PVRV 160

Query: 196 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMA----AYKFGEKWDIAMAALYLA 244
           N ++PG + DT   SKLA +  R       A    A + G+  D+A A L+LA
Sbjct: 161 NTVSPGLV-DTPLWSKLAGDA-REAMFAAAAERLPARRVGQPEDVANAILFLA 211

Length = 230

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 47.9 bits (115), Expect = 7e-07
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSA---VAALHSLGIPAIGLEG 68
              L+TGG  G+G  ++  L + GA  + ++ R       A   +A L + G     +  
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVAC 60

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
           DV  R+    V+ +     G L  +++AA          L+P  F  V+
Sbjct: 61  DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVL 109

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.7 bits (116), Expect = 9e-07
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 21/137 (15%)

Query: 79  VVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLK 136
           V E     FG +DILV++ A +  +  P  + S  G+   +   S     +       + 
Sbjct: 109 VAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMN 168

Query: 137 KGGRGQASSSSGGIIINISATLHYTATW-----YQIHVSAAKAAVDSITRSLALEWGTDY 191
            GG               + +L Y A+      Y   +S+AKAA++S T+ LA E G  +
Sbjct: 169 PGGS--------------TISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRW 214

Query: 192 AIRVNGIAPGPIKDTAG 208
            IRVN I+ GP+   AG
Sbjct: 215 GIRVNTISAGPLASRAG 231

Length = 299

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 63/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)

Query: 9   ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
           I+KGK  L+ G      I + I+    + GA +A     + + +        LG   +  
Sbjct: 2   IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYV-Y 60

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
           E DV K E    + ES     GK+D +V++ A        G+FL    + S   F   +E
Sbjct: 61  ELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFL----ETSKEAFNIAME 116

Query: 119 IDSVGTFIMCHEALK-YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
           I SV + I    AL   L  G      S  GG+        HY        +  AKAA++
Sbjct: 117 I-SVYSLIELTRALLPLLNDGASVLTLSYLGGV----KYVPHYNV------MGVAKAALE 165

Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
           S  R LA++ G    IRVN I+ GPIK  A
Sbjct: 166 SSVRYLAVDLGKK-GIRVNAISAGPIKTLA 194

Length = 274

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 30/252 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEG 68
           L GK+A  T    GIGF ++  L + GA + ++ R +  L+ A   + S   +    +  
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+ KRED  R V+   N  G+ DI   +  G       ++S   +   +++       + 
Sbjct: 66  DLTKREDLERTVKELKN-IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLT 124

Query: 129 HEALKYLKKGGRGQ-ASSSSGGI---IINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
              +  +++ G G+   S+S  I   I NI+ +            +  + ++  + R+LA
Sbjct: 125 RALVPAMERKGFGRIIYSTSVAIKEPIPNIALS------------NVVRISMAGLVRTLA 172

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGEKW 234
            E G    I VNGI PG I+ T  V +LA +  + +      A +           GE  
Sbjct: 173 KELGP-KGITVNGIMPGIIR-TDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPE 230

Query: 235 DIAMAALYLASD 246
           +I     +LASD
Sbjct: 231 EIGYLVAFLASD 242

Length = 263

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 31/244 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           +  +  L+TG   GIG  +SL+L   G  +  + R                 P      D
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----------DFPGELFACD 49

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   E     +         +D +VN        P   +     + V +++      +  
Sbjct: 50  LADIEQTAATLAQINEIHP-VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQ 108

Query: 130 EALKYLKKGGRGQASSSSGGIIINI-SATLH--YTATWYQIHVSAAKAAVDSITRSLALE 186
             L+ +K   +G+        I+NI S  +      T Y    SAAK+A+   TR+ ALE
Sbjct: 109 AFLEGMKLREQGR--------IVNICSRAIFGALDRTSY----SAAKSALVGCTRTWALE 156

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
               Y I VN +APGPI +T    +  P   E   +    +   + G   ++A A  +L 
Sbjct: 157 LAE-YGITVNAVAPGPI-ETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLL 214

Query: 245 SDAA 248
           SD A
Sbjct: 215 SDDA 218

Length = 234

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 61/244 (25%), Positives = 92/244 (37%), Gaps = 31/244 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA---LHSLGIPAIGL 66
             GK  L+ GG  GIG  I  +    GA +       T   S  AA       G  A+  
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRF-----TYAGSKDAAERLAQETGATAVQT 58

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           +   R        V   +   G LDILV  A       A +L  +    + +I+    + 
Sbjct: 59  DSADRDA------VIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYH 112

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
              EA + + +GGR     S  G  + ++    Y A+         K+A+  + R LA +
Sbjct: 113 ASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAAS---------KSALQGMARGLARD 163

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEKWDIAMAALYLA 244
           +G    I +N + PGPI DT       P     K     +MA  + G   ++A    +LA
Sbjct: 164 FG-PRGITINVVQPGPI-DT----DANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLA 217

Query: 245 SDAA 248
              A
Sbjct: 218 GPEA 221

Length = 237

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 19/206 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G V ++TG  SGIG   +    + GA + +  R +  L++      +LG   + +  D
Sbjct: 5   LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTD 64

Query: 70  VRKREDAVRVVESTINHF-GKLDILVN----AAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
           V    D V+ + +    F G++D+ VN     A G F    E+        VI+ + +G 
Sbjct: 65  V-TDADQVKALATQAASFGGRIDVWVNNVGVGAVGRF----EETPIEAHEQVIQTNLIGY 119

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
               H AL   KK G         GI IN+ +   + A  Y    SA+K  +   + +L 
Sbjct: 120 MRDAHAALPIFKKQGH--------GIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALR 171

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVS 210
            E      I V  + P    DT G  
Sbjct: 172 GELADHPDIHVCDVYPA-FMDTPGFR 196

Length = 330

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 46.6 bits (111), Expect = 6e-06
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR-----KTVLRSAVAALHSLGIP 62
           +  G V L+TGG  GIG  ++  L +   A + ++GR      +      +AAL +LG  
Sbjct: 202 LKPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR 261

Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 97
            + +  DV       R++E     +G +D +++AA
Sbjct: 262 VLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAA 296

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 44.4 bits (106), Expect = 1e-05
 Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 16  LLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVL---RSAVAALHSLGIPAIGLEGDVR 71
           L+TGG  G+G E++  L + GA  + ++ R         + +A L + G     +  DV 
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
            R+    ++         L  +++AA         +++   F  V+
Sbjct: 64  DRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVL 109

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 24/201 (11%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGD 69
           +  L+TG  SG+G  ++ +    G  +A+  RR      L++ + A +  GI       D
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYP-GIKVAVAALD 61

Query: 70  VRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGF---RTVIEIDSVGTF 125
           V   +    V     +  G LD ++VNA  G        L    F   +   E + V   
Sbjct: 62  VNDHDQVFEVFAEFRDELGGLDRVIVNAGIGK----GARLGTGKFWANKATAETNFVAAL 117

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAAVDSITRSL 183
             C  A++  ++ G G        +I ++SA   L      Y    +A+KA V S+   L
Sbjct: 118 AQCEAAMEIFREQGSGHLV-----LISSVSAVRGLPGVKAAY----AASKAGVASLGEGL 168

Query: 184 ALEWGTDYAIRVNGIAPGPIK 204
             E      I+V+ I PG I+
Sbjct: 169 RAE-LAKTPIKVSTIEPGYIR 188

Length = 248

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 22/155 (14%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           GK  ++TG  +GIG E + +L + GA + IM  R  + +   AA     I    L  +V 
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARV-IMACRD-MAKCEEAAAE---IRRDTLNHEVI 55

Query: 72  KRE------DAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
            R        ++R      +    +LD+L+N  AG    P    + +GF     ++ +G 
Sbjct: 56  VRHLDLASLKSIRAFAAEFLAEEDRLDVLIN-NAGVMRCP-YSKTEDGFEMQFGVNHLGH 113

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159
           F++ +  L  LKK        S+   I+N+S+  H
Sbjct: 114 FLLTNLLLDLLKK--------SAPSRIVNVSSLAH 140

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 45/210 (21%), Positives = 86/210 (40%), Gaps = 16/210 (7%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVR 71
           K   +TG  SGIG   +L+L   GA + +  R    L   VA   +LG         D+ 
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
             +             G +D+++N A  +     + L+   +R +++++ +G   +    
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETF 120

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
           +  +   GR       GG ++N+S+     A  +    SA+K  +  ++  L  +    +
Sbjct: 121 VPPMVAAGR-------GGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLAR-H 172

Query: 192 AIRVNGIAPGPIK-------DTAGVSKLAP 214
            I V+ + PG +K       + AGV +  P
Sbjct: 173 GIGVSVVVPGAVKTPLVNTVEIAGVDREDP 202

Length = 272

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 66/267 (24%), Positives = 105/267 (39%), Gaps = 51/267 (19%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +V ++ G G GIG  I+ ++G  G  + +    +  L +A   L   G      E DV  
Sbjct: 3   EVVVVIGAG-GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
           RE +V+ + +T    G +  LV+ A    + P++  SP     ++++D  GT ++  E  
Sbjct: 61  RE-SVKALAATAQTLGPVTGLVHTAG---VSPSQ-ASP---EAILKVDLYGTALVLEEFG 112

Query: 133 KYLKKGGRGQASSSSGG-----IIINISATLHYTAT-------------------WYQIH 168
           K +  GG G   +S  G     +       L  T T                    YQI 
Sbjct: 113 KVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQI- 171

Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM--- 225
              AK A      + A++WG   A R+N I+PG I      + LA +E+     D     
Sbjct: 172 ---AKRANALRVMAEAVKWGERGA-RINSISPGII-----STPLAQDELNGPRGDGYRNM 222

Query: 226 ----AAYKFGEKWDIAMAALYLASDAA 248
                A + G   +IA  A +L     
Sbjct: 223 FAKSPAGRPGTPDEIAALAEFLMGPRG 249

Length = 275

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 19/193 (9%)

Query: 17  LTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDA 76
           +TG  SGIG  ++ +  + GA + ++ RR   L++  A L      ++    DVR  +  
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSV-YAADVRDADAL 65

Query: 77  VRVVESTINHFGKLDILV-NA--AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
                  I   G  D+++ NA  + G      EDL+   FR V++ +  G        + 
Sbjct: 66  AAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLA--VFREVMDTNYFGMVATFQPFIA 123

Query: 134 YLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
            ++   RG     +S  G+       L     +     SA+KAA      SL +E     
Sbjct: 124 PMRAARRGTLVGIASVAGV-----RGLPGAGAY-----SASKAAAIKYLESLRVELR-PA 172

Query: 192 AIRVNGIAPGPIK 204
            +RV  IAPG I+
Sbjct: 173 GVRVVTIAPGYIR 185

Length = 257

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 43.0 bits (101), Expect = 7e-05
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 10/121 (8%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----HSLGIPAIGLE 67
           GKV ++TG  SGIGFE +     HGA + +  R  +   +AV+ +    H   + A+ L+
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 68  -GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
              +R  +      ++  +    L +LV   A  F +P   L+ +G  T  +++ +G F 
Sbjct: 61  LASLRSVQRFAEAFKAKNSP---LHVLV-CNAAVFALPWT-LTEDGLETTFQVNHLGHFY 115

Query: 127 M 127
           +
Sbjct: 116 L 116

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 18/194 (9%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +  L+TG  SGIG   +  L   G  +    R++      VAAL + G+ A  L  D  +
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRKE----EDVAALEAEGLEAFQL--DYAE 58

Query: 73  REDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
            E    +V   +    G+LD L N  A       EDL     R   E +  G   +    
Sbjct: 59  PESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRV 118

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GTD 190
           +  ++K G+G+        I+  S+ L      Y+   +A+K A++ ++ +L +E  G+ 
Sbjct: 119 IPVMRKQGQGR--------IVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSG 170

Query: 191 YAIRVNGIAPGPIK 204
             I V+ I PGPI+
Sbjct: 171 --IHVSLIEPGPIE 182

Length = 277

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 8e-05
 Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 16/191 (8%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
            V L+TG  SGIG  ++      G  +    R+       V AL + G  A+ L  DV  
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKA----EDVEALAAAGFTAVQL--DVND 55

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
                R+ E      G LD+L+N A    + P  D      R   E + V   +    AL
Sbjct: 56  GAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETN-VFAVVGVTRAL 114

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
             L +  R        G+++NI +      T +     A+KAAV +++ +L LE    + 
Sbjct: 115 FPLLRRSR--------GLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAP-FG 165

Query: 193 IRVNGIAPGPI 203
           ++V  + PG I
Sbjct: 166 VQVMEVQPGAI 176

Length = 274

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.6 bits (101), Expect = 8e-05
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 35/213 (16%)

Query: 9   ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAI 64
           +L+GK  L+TG    S I F ++    + GA + +   GR   +          L  PA 
Sbjct: 4   LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAK---RLPEPAP 60

Query: 65  GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFL-VPAEDLSPNGFRT 115
            LE DV   E    + +    H   LD +V++          GNFL  P ED++     T
Sbjct: 61  VLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVA-----T 115

Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKA 174
            + + +         +LK L K      +     + ++  AT+ + A  W    +  AKA
Sbjct: 116 ALHVSAY--------SLKSLAKALLPLMNEGGSIVGLDFDATVAWPAYDW----MGVAKA 163

Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
           A++S  R LA + G    IRVN +A GPI+  A
Sbjct: 164 ALESTNRYLARDLGPR-GIRVNLVAAGPIRTLA 195

Length = 256

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKRE 74
          L+T    GIGF ++ +L K GA + I  R +  L  A+  L   G + A+  + D+  ++
Sbjct: 4  LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAV--KADLSDKD 61

Query: 75 DAVRVVESTINHFGKLDILV-NA 96
          D   +V+      G +D LV NA
Sbjct: 62 DLKNLVKEAWELLGGIDALVWNA 84

Length = 259

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 46/221 (20%)

Query: 8   DILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAI------MGRRKTVLRSAVAALHSL 59
            +++GK  L+ G      I + I+ QL   GA +A       +G+R   L  ++ +    
Sbjct: 3   GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS---- 58

Query: 60  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------DLSPNGF 113
                 L  DV        V E+    +GKLD +V+A    F    E      D +   F
Sbjct: 59  ---DFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIG--FSDKNELKGRYADTTRENF 113

Query: 114 -RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----YQI 167
            RT++        I C    +  K   R       GG ++    TL Y  +      Y +
Sbjct: 114 SRTMV--------ISCFSFTEIAK---RAAKLMPDGGSML----TLTYGGSTRVMPNYNV 158

Query: 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 208
            +  AKAA+++  R LA ++G    IRVN I+ GP++  AG
Sbjct: 159 -MGVAKAALEASVRYLAADYGPQ-GIRVNAISAGPVRTLAG 197

Length = 271

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 11/158 (6%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--SLGIPAIGLEGD 69
            K   +TG  SG G  ++ +L   G  +A   RR   L   + A +   L +    L+ D
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD-LKARYGDRLWV----LQLD 56

Query: 70  VRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V     AVR VV+      G++D++V+ A       AE+LS    R  I+ + +G+  + 
Sbjct: 57  VTD-SAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVI 115

Query: 129 HEALKYLKK--GGRGQASSSSGGIIINISATLHYTATW 164
             AL +L++  GGR    SS GG I     +L++   W
Sbjct: 116 RAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKW 153

Length = 276

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 25/208 (12%)

Query: 14  VALLTGGGSGIGFEISLQLGK----HGAAIAIMGRRKTVLRSAVAALHS----LGIPAIG 65
           V L+TG   G G  I+ +L K     G+ + +  R    LR   A + +    L +  + 
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61

Query: 66  LE-GDVRKREDAVRVVESTI--NHFGKLDILVNAAA-GNFLVPAEDLSPNGFRTVIEIDS 121
           L+ G     E  ++ +          +L ++ NA   G+      DLS +         +
Sbjct: 62  LDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALN 121

Query: 122 VGTFI-MCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDS 178
           + + + +    LK  K       S      ++NIS    +     W      A KAA D 
Sbjct: 122 LTSMLCLTSSVLKAFKD------SPGLNRTVVNISSLCAIQPFKGW--ALYCAGKAARDM 173

Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDT 206
           + + LALE      +RV   APG + DT
Sbjct: 174 LFQVLALEEKNP-NVRVLNYAPGVL-DT 199

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 30/197 (15%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR----------RKTVLRSAVAALHSL 59
           L+GKVAL+ G   G G  I+++LG  GA + + GR          R   +      + + 
Sbjct: 6   LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA 65

Query: 60  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-----NFLVPAEDLS-PNGF 113
           G   I ++ D    E    +VE      G+LDILVN   G      +  P  + S   G 
Sbjct: 66  GGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGL 125

Query: 114 RTV-IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS-ATLHYTATWYQIHV-- 169
           R + + ID+    I  H AL  L +          GG+++ I+  T  Y AT Y++ V  
Sbjct: 126 RMLRLAIDT--HLITSHFALPLLIR--------RPGGLVVEITDGTAEYNATHYRLSVFY 175

Query: 170 SAAKAAVDSITRSLALE 186
             AK +V+ +  SLA E
Sbjct: 176 DLAKTSVNRLAFSLAHE 192

Length = 305

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD---TAGVS-KLAPEEIRSKATDYM 225
           + +K A+   TR  A  W     +RVN +APGP++     A +      E + +  T   
Sbjct: 152 AGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMG 211

Query: 226 AAYKFGEKWDIAMAALYLASDAA 248
                 E  +IA    +LASDAA
Sbjct: 212 RR---AEPDEIAPVIAFLASDAA 231

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 10/128 (7%)

Query: 74  EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
           +    +V++ +   G +D+LV N      + P +  S    R   E  S+  F +   A+
Sbjct: 57  QKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAI 116

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
             +KK G        G II   SA       +  ++   A+AA  ++  SLA E      
Sbjct: 117 AQMKKAG-------GGSIIFITSAVPKKPLAYNSLY-GPARAAAVALAESLAKELS-RDN 167

Query: 193 IRVNGIAP 200
           I V  I P
Sbjct: 168 ILVYAIGP 175

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 44/225 (19%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG---- 68
           K  L+TG  SG G  ++ +L   G          TVL +     +  G  A  L      
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGF---------TVL-AGCLTKNGPG--AKELRRVCSD 48

Query: 69  -------DVRKREDAVRVVESTINHFGKLDI--LVN-AAAGNFLVPAEDLSPNGFRTVIE 118
                  DV K E   R  +    H G+  +  LVN A    F    E L  + +R  +E
Sbjct: 49  RLRTLQLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCME 108

Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
           ++  GT  +    L  L++         + G ++N+S+              A+KAAV++
Sbjct: 109 VNLFGTVEVTKAFLPLLRR---------AKGRVVNVSSMGGRVPFPAGGAYCASKAAVEA 159

Query: 179 ITRSLALE---WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 220
            + SL  E   WG    ++V+ I PG  K   G++  +    +  
Sbjct: 160 FSDSLRRELQPWG----VKVSIIEPGNFK--TGITGNSELWEKQA 198

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 28/192 (14%)

Query: 24  IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVES 82
           I + I+  L   GA +      + + +       +L    ++ L  DV   E+     E+
Sbjct: 21  IAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET 80

Query: 83  TINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
                G +  + +  A        G FL    + S +GF     I +     +  EA K 
Sbjct: 81  IKEEVGVIHGVAHCIAFANKEDLRGEFL----ETSRDGFLLAQNISAYSLTAVAREAKKL 136

Query: 135 LKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           + +GG     +  GG  ++ N           Y + +  AKA++++  + LA + G D  
Sbjct: 137 MTEGGSIVTLTYLGGERVVQN-----------YNV-MGVAKASLEASVKYLANDLGKD-G 183

Query: 193 IRVNGIAPGPIK 204
           IRVN I+ GPI+
Sbjct: 184 IRVNAISAGPIR 195

Length = 257

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 32/212 (15%)

Query: 9   ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
           ++ GK  L+ G      I + I+      GA +A   +   + +        LG    G 
Sbjct: 7   LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAG- 65

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
             DV        V E+    +GKLD +V+A          G ++    D S + F   ++
Sbjct: 66  HCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYV----DTSRDNFTMTMD 121

Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH---VSAAKAA 175
           I SV +F    +         R +   + GG I+ ++   +Y A     H   +  AKAA
Sbjct: 122 I-SVYSFTAVAQ---------RAEKLMTDGGSILTLT---YYGAEKVMPHYNVMGVAKAA 168

Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
           +++  + LA++ G    IRVN I+ GPIK  A
Sbjct: 169 LEASVKYLAVDLGPK-NIRVNAISAGPIKTLA 199

Length = 272

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 19/191 (9%)

Query: 16  LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
           L+TG G  IG  ++  L   G  + +  R       A+  L   G  A  ++ D      
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRTH---YPAIDGLRQAG--AQCIQADFSTNAG 60

Query: 76  AVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
            +  ++    H   L  I+ NA+      P   L+      +++I     +++       
Sbjct: 61  IMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADV-LARMMQIHVNAPYLLNLALEDL 119

Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA-- 192
           L+  G   +       II+I+  +    +   I  +A+KAA+D++T S A       A  
Sbjct: 120 LRGHGHAASD------IIHITDYVVEKGSDKHIAYAASKAALDNMTLSFA----AKLAPE 169

Query: 193 IRVNGIAPGPI 203
           ++VN IAP  I
Sbjct: 170 VKVNSIAPALI 180

Length = 236

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 37/202 (18%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHG----AAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
            K  L+TG GSG G E++L+L + G    A + I   + T LR+  A    L +    L 
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAP-QVTALRAEAARR-GLALRVEKL- 58

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFL-VPAEDLSPNGFRTVIEIDSV 122
            D+    D  +  E  +      D+L+N A    AG  + +P E +     R + E +  
Sbjct: 59  -DLTDAIDRAQAAEWDV------DVLLNNAGIGEAGAVVDIPVELV-----RELFETNVF 106

Query: 123 GTFIMCHEALKYLKKGGRGQA--SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           G   +    ++ +   G+G+   +SS  G+I     T  +T  +      A+K A+++I 
Sbjct: 107 GPLELTQGFVRKMVARGKGKVVFTSSMAGLI-----TGPFTGAY-----CASKHALEAIA 156

Query: 181 RSLALEWGTDYAIRVNGIAPGP 202
            ++  E    + I+V  + PGP
Sbjct: 157 EAMHAEL-KPFGIQVATVNPGP 177

Length = 257

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 41/152 (26%), Positives = 60/152 (39%), Gaps = 27/152 (17%)

Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------DLSPNGFRTVIEI 119
           +E DV   E   R   +     GK+D +V+A A  +    E      D S +G+    +I
Sbjct: 60  VECDVASDESIERAFATIKERVGKIDGIVHAIA--YAKKEELGGNVTDTSRDGYALAQDI 117

Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----VSAAKAA 175
            +     +   A   L  G           I+     TL Y  +   I     +  AKAA
Sbjct: 118 SAYSLIAVAKYARPLLNPGA---------SIV-----TLTYFGSERAIPNYNVMGIAKAA 163

Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
           ++S  R LA + G    IRVN I+ G +K  A
Sbjct: 164 LESSVRYLARDLG-KKGIRVNAISAGAVKTLA 194

Length = 252

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	259
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	100.0
PRK08264	238	short chain dehydrogenase; Validated	100.0
PRK08017	256	oxidoreductase; Provisional	100.0
PRK09291	257	short chain dehydrogenase; Provisional	100.0
PRK08177	225	short chain dehydrogenase; Provisional	99.98
PRK12367	245	short chain dehydrogenase; Provisional	99.98
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.95
PLN03209	576	translocon at the inner envelope of chloroplast su	99.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.93
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.92
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.91
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.9
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.9
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.9
PRK06720	169	hypothetical protein; Provisional	99.89
PLN02572	442	UDP-sulfoquinovose synthase	99.87
PLN02653	340	GDP-mannose 4,6-dehydratase	99.87
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.86
PLN02650	351	dihydroflavonol-4-reductase	99.86
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PLN00198	338	anthocyanidin reductase; Provisional	99.86
PLN02583	297	cinnamoyl-CoA reductase	99.85
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.84
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.84
PLN02214	342	cinnamoyl-CoA reductase	99.84
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.83
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.83
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.83
PLN02240	352	UDP-glucose 4-epimerase	99.81
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.8
PLN02686	367	cinnamoyl-CoA reductase	99.8
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.79
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.79
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.78
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.77
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.77
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.76
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.75
PLN02427	386	UDP-apiose/xylose synthase	99.74
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.73
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.73
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.73
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.72
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.71
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.69
PLN02260	668	probable rhamnose biosynthetic enzyme	99.69
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.68
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.67
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.67
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.66
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.65
PLN02206	442	UDP-glucuronate decarboxylase	99.63
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.62
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.62
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.61
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.6
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.59
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.58
CHL00194	317	ycf39 Ycf39; Provisional	99.57
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.52
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.51
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.5
PRK07201	657	short chain dehydrogenase; Provisional	99.47
PRK05865	854	hypothetical protein; Provisional	99.46
PLN02996	491	fatty acyl-CoA reductase	99.45
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.42
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.41
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.39
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.38
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.37
PRK08309	177	short chain dehydrogenase; Provisional	99.36
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.34
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.34
PLN02778	298	3,5-epimerase/4-reductase	99.34
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.32
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.27
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.27
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.24
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.23
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.21
PLN00016	378	RNA-binding protein; Provisional	99.2
PLN02503	605	fatty acyl-CoA reductase 2	99.19
PLN02260	668	probable rhamnose biosynthetic enzyme	99.16
PRK12320	699	hypothetical protein; Provisional	99.16
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.06
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.99
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.97
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.92
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.89
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.81
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.77
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.76
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.73
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.69
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.66
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.6
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.59
COG2910	211	Putative NADH-flavin reductase [General function p	98.47
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.39
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.36
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.35
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.34
PRK09620	229	hypothetical protein; Provisional	98.33
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.3
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.29
PLN00106	323	malate dehydrogenase	98.25
PRK14982	340	acyl-ACP reductase; Provisional	98.19
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.11
PTZ00325	321	malate dehydrogenase; Provisional	98.09
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.96
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.88
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.88
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.88
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.85
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.82
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.8
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.79
KOG2774	366	consensus NAD dependent epimerase [General functio	97.76
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.66
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.65
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.64
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.59
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.59
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.58
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.58
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.56
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.55
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.53
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.53
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.53
PRK05086	312	malate dehydrogenase; Provisional	97.51
PRK06849	389	hypothetical protein; Provisional	97.47
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.44
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.43
PRK14968	188	putative methyltransferase; Provisional	97.43
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.42
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.4
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.39
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.35
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.34
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.27
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.27
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.24
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.23
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.21
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.19
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.19
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.19
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.18
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.18
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.16
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.15
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.14
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.12
COG3268	382	Uncharacterized conserved protein [Function unknow	97.11
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.11
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.11
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.1
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.09
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.02
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.02
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.01
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.0
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.99
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.99
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.98
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.95
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.94
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.94
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.92
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.92
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.91
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.91
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.88
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.88
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.88
PRK09496	453	trkA potassium transporter peripheral membrane com	96.85
PRK04148	134	hypothetical protein; Provisional	96.84
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.81
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.8
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.8
PLN00203	519	glutamyl-tRNA reductase	96.79
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.78
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.77
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.77
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.75
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.73
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.72
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.72
PRK08223	287	hypothetical protein; Validated	96.71
PLN02602	350	lactate dehydrogenase	96.69
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.68
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.62
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.58
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.56
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.51
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.51
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.51
PTZ00117	319	malate dehydrogenase; Provisional	96.5
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.5
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.49
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.48
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.48
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.47
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.47
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.46
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.45
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.42
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.42
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.41
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.4
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.37
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.35
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.31
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.3
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.28
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.27
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.26
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.26
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.26
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	96.25
PRK05442	326	malate dehydrogenase; Provisional	96.24
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.23
PRK14851	679	hypothetical protein; Provisional	96.22
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.22
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.19
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.19
PLN02740	381	Alcohol dehydrogenase-like	96.19
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.18
PRK09496	453	trkA potassium transporter peripheral membrane com	96.15
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	96.14
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.14
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.13
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.12
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	96.11
PRK07411	390	hypothetical protein; Validated	96.06
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.04
PLN02928	347	oxidoreductase family protein	96.03
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.0
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.98
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.96
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.93
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.91
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.9
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.89
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.89
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.87
PRK14852	989	hypothetical protein; Provisional	95.85
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	95.85
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.84
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.83
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.82
PRK14967	223	putative methyltransferase; Provisional	95.81
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.81
PRK07877	722	hypothetical protein; Provisional	95.8
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.8
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.8
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	95.78
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.77
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.76
PRK12480	330	D-lactate dehydrogenase; Provisional	95.74
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.71
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.71
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.71
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.7
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.69
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.69
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.68
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.67
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.67
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.66
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.63
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.62
PF13649	101	Methyltransf_25: Methyltransferase domain; PDB: 3B	95.61
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.6
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.57
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.56
PRK08328	231	hypothetical protein; Provisional	95.54
PRK13771	334	putative alcohol dehydrogenase; Provisional	95.53
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.53
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.53
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.52
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.52
PTZ00354	334	alcohol dehydrogenase; Provisional	95.52
PRK08655	437	prephenate dehydrogenase; Provisional	95.52
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.51
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.5
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.49
PRK10669	558	putative cation:proton antiport protein; Provision	95.49
PLN03139	386	formate dehydrogenase; Provisional	95.48
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	95.45
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.43

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=7.2e-51  Score=304.49  Aligned_cols=241  Identities=27%  Similarity=0.333  Sum_probs=218.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .++.|.++||||++|||++++..|+++|++|++.+++....++....+..++ +...+.||+++.++++..+++..+.+|
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999999988888888886654 466789999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++++||||||+..+..+..+..++|...+.+|+.|.|.++|++.+.|.....      .+++||++||+.+..++.++..
T Consensus        90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~------~~~sIiNvsSIVGkiGN~GQtn  163 (256)
T KOG1200|consen   90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ------QGLSIINVSSIVGKIGNFGQTN  163 (256)
T ss_pred             CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC------CCceEEeehhhhcccccccchh
Confidence            9999999999988888888999999999999999999999999998655433      1369999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+++|+++.+|+|++++|++ ++|||||.++||++.||+. ..+ |+....++...+|++|++.+||||+.++||+|+.+
T Consensus       164 YAAsK~GvIgftktaArEla-~knIrvN~VlPGFI~tpMT-~~m-p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~s  240 (256)
T KOG1200|consen  164 YAASKGGVIGFTKTAARELA-RKNIRVNVVLPGFIATPMT-EAM-PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDAS  240 (256)
T ss_pred             hhhhcCceeeeeHHHHHHHh-hcCceEeEeccccccChhh-hhc-CHHHHHHHHccCCccccCCHHHHHHHHHHHhcccc
Confidence            99999999999999999999 9999999999999997653 333 56677788899999999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      +|+||+.+-+|
T Consensus       241 sYiTG~t~evt  251 (256)
T KOG1200|consen  241 SYITGTTLEVT  251 (256)
T ss_pred             ccccceeEEEe
Confidence            99999988664

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-49  Score=329.17  Aligned_cols=243  Identities=23%  Similarity=0.277  Sum_probs=216.4

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|++|+++++++++++. 
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-   81 (263)
T PRK08339          3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-   81 (263)
T ss_pred             ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-
Confidence            45688999999999999999999999999999999999988888888777543 5578899999999999999999986 


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|+|++++.        |+||++||..+..+.+.
T Consensus        82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~--------g~Ii~isS~~~~~~~~~  153 (263)
T PRK08339         82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGF--------GRIIYSTSVAIKEPIPN  153 (263)
T ss_pred             hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEEcCccccCCCCc
Confidence            5899999999999877778888999999999999999999999999999987754        89999999999999899


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---------CChHHHHHHhhhhccCCCCCCHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDI  236 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dv  236 (259)
                      ...|+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++....         ..+++..+.+.+..|.+|+++|+|+
T Consensus       154 ~~~y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  232 (263)
T PRK08339        154 IALSNVVRISMAGLVRTLAKELG-PKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEI  232 (263)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHH
Confidence            99999999999999999999998 9999999999999998753221         1123344455667789999999999


Q ss_pred             HHHHHHhcCccCCcccccccccC
Q 024976          237 AMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       237 a~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |++++||+|+.+.++||+.|.+|
T Consensus       233 a~~v~fL~s~~~~~itG~~~~vd  255 (263)
T PRK08339        233 GYLVAFLASDLGSYINGAMIPVD  255 (263)
T ss_pred             HHHHHHHhcchhcCccCceEEEC
Confidence            99999999999999999999987

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-49  Score=324.66  Aligned_cols=242  Identities=29%  Similarity=0.376  Sum_probs=213.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+..  +...+++...+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999988642  34455555556678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|++|||||.....++.+.++++|++.+++|+.+++.++++++|+|++++.       +|+||++||..++.+.+...
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~  154 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGN-------GGKIINIASMLSFQGGIRVP  154 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC-------CCEEEEeCChhhcCCCCCCc
Confidence            99999999999877778888999999999999999999999999999987542       38999999999999888889


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+|+++|+|+++.|++ ++|||||+|+||+++|++.......++..+......|.+|+++|||+++++.||+|+.
T Consensus       155 ~Y~asK~a~~~l~~~la~e~~-~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~  233 (251)
T PRK12481        155 SYTASKSAVMGLTRALATELS-QYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSA  233 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999998 8999999999999998754432222333344556678999999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.++||+.|.+|
T Consensus       234 ~~~~~G~~i~vd  245 (251)
T PRK12481        234 SDYVTGYTLAVD  245 (251)
T ss_pred             ccCcCCceEEEC
Confidence            999999999987

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.5e-49  Score=322.89  Aligned_cols=236  Identities=21%  Similarity=0.201  Sum_probs=206.3

Q ss_pred             CCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++|+++||||+  +|||++++++|+++|++|++++|+. +.++..+++.  +.++.++++|++|+++++++++++.+.+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            679999999999  8999999999999999999999983 4444444443  2357889999999999999999999999


Q ss_pred             CCccEEEECCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           88 GKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        88 g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      |++|+||||||....    +++.+.+.++|++.+++|+.+++.++++++|+|.+.          |+||++||..+..+.
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~----------g~Iv~iss~~~~~~~  151 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG----------ASIVTLTYFGSERAI  151 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC----------ceEEEEeccCccccC
Confidence            999999999997643    577889999999999999999999999999998642          789999999998888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +.+..|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++......+++..+.+....|.+|+++||||++++.||
T Consensus       152 ~~~~~Y~asKaal~~l~~~la~el~-~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l  230 (252)
T PRK06079        152 PNYNVMGIAKAALESSVRYLARDLG-KKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFL  230 (252)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHH
Confidence            8899999999999999999999998 899999999999999875433222344445556667889999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +|+.+.++||+.|.+|
T Consensus       231 ~s~~~~~itG~~i~vd  246 (252)
T PRK06079        231 LSDLSTGVTGDIIYVD  246 (252)
T ss_pred             hCcccccccccEEEeC
Confidence            9999999999999987

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.1e-49  Score=324.92  Aligned_cols=239  Identities=24%  Similarity=0.264  Sum_probs=202.5

Q ss_pred             CCCCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++|+++||||++  |||+++|++|+++|++|++++|+....+...+.....+. ..++.+|++|.++++++++++.+.
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHH
Confidence            46899999999996  999999999999999999999875433332222222232 357899999999999999999999


Q ss_pred             cCCccEEEECCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           87 FGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        87 ~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +|++|+||||||....    .++.+.+.++|++.+++|+.++++++|+++|+|.+          +|+||++||..+..+
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~----------~G~Iv~isS~~~~~~  152 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD----------GGSMLTLTYGGSTRV  152 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc----------CceEEEEcCCCcccc
Confidence            9999999999997643    46778999999999999999999999999999963          288999999999888


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      .+.+..|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++.......+.......+..|.+|+++|||+|++++|
T Consensus       153 ~~~~~~Y~asKaAl~~l~r~la~el~-~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~f  231 (271)
T PRK06505        153 MPNYNVMGVAKAALEASVRYLAADYG-PQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALY  231 (271)
T ss_pred             CCccchhhhhHHHHHHHHHHHHHHHh-hcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHH
Confidence            88899999999999999999999998 99999999999999986532211112223334456788999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.+.++||+.|.+|
T Consensus       232 L~s~~~~~itG~~i~vd  248 (271)
T PRK06505        232 LLSDLSSGVTGEIHFVD  248 (271)
T ss_pred             HhCccccccCceEEeec
Confidence            99999999999999987

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=9.3e-49  Score=306.34  Aligned_cols=230  Identities=27%  Similarity=0.301  Sum_probs=206.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+++|+++|||||||||.++|+.|+++|++|++++|+.++++++++++..  ..+..+..|++|.++++++++.+.+.|
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~   79 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF   79 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence            346789999999999999999999999999999999999999999999865  568999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||....+++.+.+.++|+.++++|+.|.++.+++++|.|.+++.        |.||++||+++..+++...
T Consensus        80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~--------G~IiN~~SiAG~~~y~~~~  151 (246)
T COG4221          80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKS--------GHIINLGSIAGRYPYPGGA  151 (246)
T ss_pred             CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCC--------ceEEEeccccccccCCCCc
Confidence            99999999999887799999999999999999999999999999999999986        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .||++|+++..|++.|+.|+. .++|||..|+||.+.++.+.... .+...+...+........+|+|||+++.|.++.+
T Consensus       152 vY~ATK~aV~~fs~~LR~e~~-g~~IRVt~I~PG~v~~~~~s~v~-~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P  229 (246)
T COG4221         152 VYGATKAAVRAFSLGLRQELA-GTGIRVTVISPGLVETTEFSTVR-FEGDDERADKVYKGGTALTPEDIAEAVLFAATQP  229 (246)
T ss_pred             cchhhHHHHHHHHHHHHHHhc-CCCeeEEEecCceecceeccccc-CCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999998 99999999999999865544433 3333344444444456789999999999999865


Q ss_pred             CC
Q 024976          248 AV  249 (259)
Q Consensus       248 ~~  249 (259)
                      .+
T Consensus       230 ~~  231 (246)
T COG4221         230 QH  231 (246)
T ss_pred             Cc
Confidence            43

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.1e-49  Score=324.93  Aligned_cols=237  Identities=26%  Similarity=0.261  Sum_probs=201.1

Q ss_pred             CCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH-HhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         9 ~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++ .+.+.. .++.+|++|+++++++++++.+
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            4689999999997  89999999999999999999999853 22223333 233334 6789999999999999999999


Q ss_pred             HcCCccEEEECCCCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           86 HFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        86 ~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      .+|++|+||||||+..    .+++.+.+.++|++.+++|+.++++++|+++|.|.++          |+||++||..+..
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~----------g~Iv~isS~~~~~  149 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG----------ASVLTLSYLGGVK  149 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC----------CcEEEEecCCCcc
Confidence            9999999999999754    2577889999999999999999999999999999653          7899999999988


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh-HHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      +.+.+..|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++. ....+ ...........|++|+++|+||++++
T Consensus       150 ~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~-~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v  227 (274)
T PRK08415        150 YVPHYNVMGVAKAALESSVRYLAVDLG-KKGIRVNAISAGPIKTLAA-SGIGDFRMILKWNEINAPLKKNVSIEEVGNSG  227 (274)
T ss_pred             CCCcchhhhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHHH-hccchhhHHhhhhhhhCchhccCCHHHHHHHH
Confidence            888899999999999999999999998 9999999999999998643 22221 11112223456889999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.+.|+||+.|.+|
T Consensus       228 ~fL~s~~~~~itG~~i~vd  246 (274)
T PRK08415        228 MYLLSDLSSGVTGEIHYVD  246 (274)
T ss_pred             HHHhhhhhhcccccEEEEc
Confidence            9999999999999999987

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=2.2e-48  Score=320.39  Aligned_cols=241  Identities=27%  Similarity=0.271  Sum_probs=206.5

Q ss_pred             CCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChh--hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +++++|+++||||+  +|||++++++|+++|++|++++|+.+  +.++..+++.+...++.++.+|++|+++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            45789999999986  89999999999999999998876543  344555556544445778999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           84 INHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      .+.+|++|++|||||...    ..++.+.+.++|++.+++|+.+++.++|+++|.|.+.          |+||++||..+
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~----------g~Iv~isS~~~  151 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG----------GSIVTLTYLGG  151 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC----------CeEEEEecccc
Confidence            999999999999999753    2567888999999999999999999999999999752          78999999999


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      ..+.+.+..|++||+|+.+|+|+|+.|++ ++||+||+|+||+++|++.......++..+......|.+|+++|+|++++
T Consensus       152 ~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  230 (258)
T PRK07370        152 VRAIPNYNVMGVAKAALEASVRYLAAELG-PKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNT  230 (258)
T ss_pred             ccCCcccchhhHHHHHHHHHHHHHHHHhC-cCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHH
Confidence            98989999999999999999999999998 99999999999999987532211112333344456788999999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +.||+|+.+.++|||.|.+|
T Consensus       231 ~~fl~s~~~~~~tG~~i~vd  250 (258)
T PRK07370        231 AAFLLSDLASGITGQTIYVD  250 (258)
T ss_pred             HHHHhChhhccccCcEEEEC
Confidence            99999999999999999987

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.1e-48  Score=319.23  Aligned_cols=240  Identities=21%  Similarity=0.169  Sum_probs=203.2

Q ss_pred             CCCCcEEEEeCC--ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa--~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++|+++||||  ++|||+++|+.|+++|++|++++|+. +.++..+++.........++||++|+++++++++++.+.
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999997  67999999999999999999988764 334444455433223567899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCC----C-CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           87 FGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      +|++|++|||||+....    + +++.+.++|++.+++|+.++++++|+++|.|+++         +|+||++||..+..
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~---------~g~Iv~iss~~~~~  152 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR---------NSAIVALSYLGAVR  152 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc---------CcEEEEEccccccc
Confidence            99999999999986432    2 3567889999999999999999999999998654         27899999999988


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +.+.+..|+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++.......++....+.+..|++|+++|+|||+++.
T Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~  231 (261)
T PRK08690        153 AIPNYNVMGMAKASLEAGIRFTAACLG-KEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAA  231 (261)
T ss_pred             CCCCcccchhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHH
Confidence            888999999999999999999999998 9999999999999998754322222333344556678999999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+++.+.++||+.|.+|
T Consensus       232 ~l~s~~~~~~tG~~i~vd  249 (261)
T PRK08690        232 FLLSDLSSGITGEITYVD  249 (261)
T ss_pred             HHhCcccCCcceeEEEEc
Confidence            999999999999999987

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.4e-48  Score=318.90  Aligned_cols=239  Identities=23%  Similarity=0.240  Sum_probs=203.1

Q ss_pred             CCCCCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         8 ~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..+++|+++||||++  |||+++++.|+++|++|++.+|+. ..++..+++... +. ..++++|++|+++++++++++.
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHH
Confidence            346799999999997  999999999999999999998874 344444555432 32 3467899999999999999999


Q ss_pred             HHcCCccEEEECCCCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           85 NHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +.+|++|+||||+|...    ..++.+.+.++|++.+++|+.+++.++++++|.|.++          |+||++||..+.
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~----------G~Iv~isS~~~~  151 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG----------GSIVTLTYYGAE  151 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccC----------ceEEEEecCccc
Confidence            99999999999999753    2467788999999999999999999999999999542          889999999988


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+.+.+..|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.......++..+......|.+|+++|+|+|+++
T Consensus       152 ~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~  230 (260)
T PRK06603        152 KVIPNYNVMGVAKAALEASVKYLANDMG-ENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAA  230 (260)
T ss_pred             cCCCcccchhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            8888899999999999999999999998 899999999999999864321111122333445567899999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.+.|+||+.|.+|
T Consensus       231 ~~L~s~~~~~itG~~i~vd  249 (260)
T PRK06603        231 VYLFSELSKGVTGEIHYVD  249 (260)
T ss_pred             HHHhCcccccCcceEEEeC
Confidence            9999999999999999987

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-48  Score=317.46  Aligned_cols=243  Identities=29%  Similarity=0.424  Sum_probs=216.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh--cCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..  .+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999999888888888865  455788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.        |+||++||..+..+.+.
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  154 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGR--------GSIVNIASTHAFKIIPG  154 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCC--------eEEEEECChhhccCCCC
Confidence            9999999999999876667778889999999999999999999999999987654        89999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---C-hHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---A-PEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      ...|+++|+|+++|+|+++.|++ ++|||||+|+||+++|++.....   . ++..........|.+|+++|+|+|++++
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~el~-~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~  233 (260)
T PRK07063        155 CFPYPVAKHGLLGLTRALGIEYA-ARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAV  233 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999998 89999999999999987643211   1 1222334456678899999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+++.+.|+||+.|.+|
T Consensus       234 fl~s~~~~~itG~~i~vd  251 (260)
T PRK07063        234 FLASDEAPFINATCITID  251 (260)
T ss_pred             HHcCccccccCCcEEEEC
Confidence            999999999999999987

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-48  Score=316.10  Aligned_cols=242  Identities=27%  Similarity=0.337  Sum_probs=213.7

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999998888888888776777889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-c-
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-W-  164 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~-  164 (259)
                      +|++|+||||||.....++.+.+.++|++.+++|+.+++.++++++++|.+++.       +|+||++||..+..+. + 
T Consensus        84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~  156 (253)
T PRK05867         84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ-------GGVIINTASMSGHIINVPQ  156 (253)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC-------CcEEEEECcHHhcCCCCCC
Confidence            999999999999877778888999999999999999999999999999987642       3789999998876543 3 


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ....|+++|+|+++|+|+++.|++ ++|||||+|+||+++|++... . + +..+......|.+|+.+|+|||++++||+
T Consensus       157 ~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~i~PG~v~t~~~~~-~-~-~~~~~~~~~~~~~r~~~p~~va~~~~~L~  232 (253)
T PRK05867        157 QVSHYCASKAAVIHLTKAMAVELA-PHKIRVNSVSPGYILTELVEP-Y-T-EYQPLWEPKIPLGRLGRPEELAGLYLYLA  232 (253)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHh-HhCeEEEEeecCCCCCccccc-c-h-HHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            457899999999999999999998 899999999999999876432 2 1 22233445678899999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      |+.+.++|||.|.+|
T Consensus       233 s~~~~~~tG~~i~vd  247 (253)
T PRK05867        233 SEASSYMTGSDIVID  247 (253)
T ss_pred             CcccCCcCCCeEEEC
Confidence            999999999999988

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-47  Score=316.07  Aligned_cols=239  Identities=21%  Similarity=0.198  Sum_probs=202.0

Q ss_pred             CCCCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++++|+++||||++  |||++++++|+++|++|++++|+ +++++..+++......+.++.||++|+++++++++++.+.
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence            37899999999986  99999999999999999999987 3445555666544345678999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCC-----CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           87 FGKLDILVNAAAGNFLVP-----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      +|++|++|||||+....+     +.+.+.++|++.+++|+.+++.+++++.|.+.+          +|+||++||..+..
T Consensus        82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~g~Iv~iss~~~~~  151 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP----------GSALLTLSYLGAER  151 (262)
T ss_pred             cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC----------CcEEEEEecCCCCC
Confidence            999999999999754322     556788999999999999999999999986642          27899999999888


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +.+.+..|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.......++..+......|.+|+++|+||+++++
T Consensus       152 ~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~  230 (262)
T PRK07984        152 AIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA  230 (262)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhc-ccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHH
Confidence            888899999999999999999999998 8999999999999998643211111222333445678899999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+|+.+.++||+.|.+|
T Consensus       231 ~L~s~~~~~itG~~i~vd  248 (262)
T PRK07984        231 FLCSDLSAGISGEVVHVD  248 (262)
T ss_pred             HHcCcccccccCcEEEEC
Confidence            999999999999999987

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2e-47  Score=313.55  Aligned_cols=245  Identities=36%  Similarity=0.454  Sum_probs=212.2

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      ++..+.+|+++|||+++|||+++|++|++.|++|++.+|+.+.+++..+++...+   .++..+.||+++++++++++++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            3466899999999999999999999999999999999999999999888876543   4599999999999999999999


Q ss_pred             HHHH-cCCccEEEECCCCCCCC-CCCCCCHHHHHHHHhccchh-HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           83 TINH-FGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVG-TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        83 ~~~~-~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      ..+. +|++|++|||||..... ++.+.++++|++.+++|+.| .+.+.+++.+++.+.+.        |.|+++||..+
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~g--------g~I~~~ss~~~  153 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKG--------GSIVNISSVAG  153 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCC--------ceEEEEecccc
Confidence            9998 79999999999987654 78999999999999999995 66677777777776553        89999999999


Q ss_pred             cccCccc-hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh---HHHHHH--hhhhccCCCCCCH
Q 024976          160 YTATWYQ-IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSK--ATDYMAAYKFGEK  233 (259)
Q Consensus       160 ~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~  233 (259)
                      ..+.... ..|+++|+|+++|+|+++.||+ ++|||||+|+||.+.|+.....+..   ++..+.  .....|.+|+++|
T Consensus       154 ~~~~~~~~~~Y~~sK~al~~ltr~lA~El~-~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~  232 (270)
T KOG0725|consen  154 VGPGPGSGVAYGVSKAALLQLTRSLAKELA-KHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTP  232 (270)
T ss_pred             ccCCCCCcccchhHHHHHHHHHHHHHHHHh-hcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCH
Confidence            8886666 7999999999999999999999 9999999999999998762222222   233333  3456789999999


Q ss_pred             HHHHHHHHHhcCccCCcccccccccC
Q 024976          234 WDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+++.+.||+++.++|+|||.|.+|
T Consensus       233 ~eva~~~~fla~~~asyitG~~i~vd  258 (270)
T KOG0725|consen  233 EEVAEAAAFLASDDASYITGQTIIVD  258 (270)
T ss_pred             HHHHHhHHhhcCcccccccCCEEEEe
Confidence            99999999999998889999999987

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-47  Score=314.47  Aligned_cols=240  Identities=25%  Similarity=0.234  Sum_probs=203.2

Q ss_pred             CCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ++++||+++||||+  +|||++++++|+++|++|++++|+.+..+ ..+++.+....+.++.||++|+++++++++++.+
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   84 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE   84 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH
Confidence            45889999999999  59999999999999999999999864322 2222222112356889999999999999999999


Q ss_pred             HcCCccEEEECCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           86 HFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      .+|++|++|||||....    +++.+.+.++|++.+++|+.+++++++.++|+|++.          |+||++||..+..
T Consensus        85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~----------g~Ii~iss~~~~~  154 (258)
T PRK07533         85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG----------GSLLTMSYYGAEK  154 (258)
T ss_pred             HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC----------CEEEEEecccccc
Confidence            99999999999997542    567788999999999999999999999999999532          7899999999888


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +.+.+..|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++.......++..+......|.+|+.+|+|++++++
T Consensus       155 ~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~  233 (258)
T PRK07533        155 VVENYNLMGPVKAALESSVRYLAAELG-PKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAA  233 (258)
T ss_pred             CCccchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence            888899999999999999999999998 8999999999999998754322111233334455678899999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+|+.+.++||+.|.+|
T Consensus       234 ~L~s~~~~~itG~~i~vd  251 (258)
T PRK07533        234 FLASDAARRLTGNTLYID  251 (258)
T ss_pred             HHhChhhccccCcEEeeC
Confidence            999999999999999987

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-47  Score=310.71  Aligned_cols=243  Identities=30%  Similarity=0.383  Sum_probs=215.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999988888888887777789999999999999999999999999


Q ss_pred             CCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCcc
Q 024976           88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWY  165 (259)
Q Consensus        88 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~  165 (259)
                      +++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.        ++||++||..+. .+.+.
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~--------~~iv~~sS~~~~~~~~~~  153 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGG--------GSLIFTSTFVGHTAGFPG  153 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------ceEEEEechHhhccCCCC
Confidence            99999999999763 467778899999999999999999999999999987754        889999998886 56788


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      +..|++||++++.|+++++.|++ ++||+||+|+||+++|++.......++.........|.+|+.+|+|+++.++||++
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  232 (254)
T PRK07478        154 MAAYAASKAGLIGLTQVLAAEYG-AQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLAS  232 (254)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            89999999999999999999998 89999999999999987543322223333344455678899999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       233 ~~~~~~~G~~~~~d  246 (254)
T PRK07478        233 DAASFVTGTALLVD  246 (254)
T ss_pred             chhcCCCCCeEEeC
Confidence            99999999999987

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-47  Score=313.23  Aligned_cols=239  Identities=21%  Similarity=0.209  Sum_probs=203.6

Q ss_pred             CCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCCh---hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      +++++|+++||||+  +|||++++++|+++|++|++++|+.   +.++++.+++.  +.++.++++|++|++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence            45789999999997  8999999999999999999998753   33444444332  45688999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           83 TINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      +.+.+|++|++|||||+..    ..++.+.+.++|.+.+++|+.+++.++++++|+|.+.          |+||++||..
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----------g~Iv~isS~~  150 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG----------GSIVTLTYLG  150 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC----------ceEEEEcccC
Confidence            9999999999999999753    2567788999999999999999999999999999642          8899999999


Q ss_pred             ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      +..+.+.+..|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.......++..+......|.+|+.+|+|+++
T Consensus       151 ~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~  229 (257)
T PRK08594        151 GERVVQNYNVMGVAKASLEASVKYLANDLG-KDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGD  229 (257)
T ss_pred             CccCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHH
Confidence            999888899999999999999999999998 8999999999999998643211111222233445668889999999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+|+.+.++||+.|.+|
T Consensus       230 ~~~~l~s~~~~~~tG~~~~~d  250 (257)
T PRK08594        230 TAAFLFSDLSRGVTGENIHVD  250 (257)
T ss_pred             HHHHHcCcccccccceEEEEC
Confidence            999999999999999999887

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.5e-47  Score=312.84  Aligned_cols=238  Identities=23%  Similarity=0.210  Sum_probs=197.0

Q ss_pred             CCCCcEEEEeCC--ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         9 ~l~~k~~lItGa--~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .+++|+++||||  ++|||++++++|+++|++|++++|.... ++..+++. ..+. ...+.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHH
Confidence            468999999996  6899999999999999999998764222 22222232 2232 35789999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCC----C-CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           86 HFGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      .+|++|++|||||.....    + +.+.+.++|++.+++|+.++++++|+++|+|.+  .        |+||++||..+.
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~--------g~Ii~iss~~~~  150 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--D--------ASLLTLSYLGAE  150 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--C--------ceEEEEeccccc
Confidence            999999999999975432    2 346788999999999999999999999999943  2        789999999998


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+.+.+..|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.......++..+......|++|+++||||++++
T Consensus       151 ~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~  229 (260)
T PRK06997        151 RVVPNYNTMGLAKASLEASVRYLAVSLG-PKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVA  229 (260)
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHH
Confidence            8888899999999999999999999998 899999999999999864322111122233344556889999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      .||+|+++.|+||+.|.+|
T Consensus       230 ~~l~s~~~~~itG~~i~vd  248 (260)
T PRK06997        230 AFLLSDLASGVTGEITHVD  248 (260)
T ss_pred             HHHhCccccCcceeEEEEc
Confidence            9999999999999999987

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-46  Score=309.07  Aligned_cols=243  Identities=30%  Similarity=0.418  Sum_probs=213.8

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+ .+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999998754 45667777776667788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .++++|++|||||.....++.+.+.++|++.+++|+.+++.+++++++.|.+++.        |+||++||..+..+.+.
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~  154 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGG--------GSIVNIASMSGIIVNRG  154 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC--------cEEEEECchhhcCCCCC
Confidence            9999999999999877777888999999999999999999999999999987654        89999999988776543


Q ss_pred             --chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          166 --QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       166 --~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                        ...|+++|+|+++|+|+++.|++ ++|||||+|+||+++|++.... ...+..+.+....|.+|+++|+||+++++||
T Consensus       155 ~~~~~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l  232 (254)
T PRK06114        155 LLQAHYNASKAGVIHLSKSLAMEWV-GRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQRMAKVDEMVGPAVFL  232 (254)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              68899999999999999999998 8999999999999998764321 1122334455677899999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +|+.++|+||+.|.+|
T Consensus       233 ~s~~~~~~tG~~i~~d  248 (254)
T PRK06114        233 LSDAASFCTGVDLLVD  248 (254)
T ss_pred             cCccccCcCCceEEEC
Confidence            9999999999999987

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-46  Score=309.38  Aligned_cols=243  Identities=27%  Similarity=0.352  Sum_probs=219.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            45889999999999999999999999999999999999888888888887666678889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.|.+++.        ++||++||..+..+.+...
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~  156 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQA--------GKIINICSMQSELGRDTIT  156 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEccchhccCCCCCc
Confidence            99999999999877778888999999999999999999999999999987654        8999999998888888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+++++++++++.|++ ++||++|+|+||+++|+........++.........|.+|+++||||++++.||+++.
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~  235 (254)
T PRK08085        157 PYAASKGAVKMLTRGMCVELA-RHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKA  235 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999998 8999999999999998765443333444445556778999999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.++||+.|.+|
T Consensus       236 ~~~i~G~~i~~d  247 (254)
T PRK08085        236 SDFVNGHLLFVD  247 (254)
T ss_pred             ccCCcCCEEEEC
Confidence            999999999987

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=2e-46  Score=307.96  Aligned_cols=243  Identities=28%  Similarity=0.391  Sum_probs=212.4

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++||+++||||++|||++++++|+++|++|++++++..  ++..+++...+.++..+++|++|.++++++++++.+.
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999998877542  4445555555667889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++++|++|||||.....++.+.++++|++.+++|+.+++.++++++|.|.+++.       +|+||++||..+..+.+..
T Consensus        83 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  155 (253)
T PRK08993         83 FGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN-------GGKIINIASMLSFQGGIRV  155 (253)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-------CeEEEEECchhhccCCCCC
Confidence            999999999999877777888999999999999999999999999999987642       3899999999999888888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+++|+|+++++++++.|+. ++||+||+|+||+++|++.......+...+.+.+..|.+|+.+|+|+++.+.||+|+
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~  234 (253)
T PRK08993        156 PSYTASKSGVMGVTRLMANEWA-KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASS  234 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999998 899999999999999876533222233334455677889999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.+++|+.|.+|
T Consensus       235 ~~~~~~G~~~~~d  247 (253)
T PRK08993        235 ASDYINGYTIAVD  247 (253)
T ss_pred             cccCccCcEEEEC
Confidence            9999999999987

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-46  Score=310.31  Aligned_cols=244  Identities=25%  Similarity=0.297  Sum_probs=214.6

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988888877777654  3468899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.        |+||++||..+..+.+
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~  154 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAA--------ASIVCVNSLLALQPEP  154 (265)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCC--------cEEEEeccccccCCCC
Confidence            99999999999999877778888999999999999999999999999999987654        8999999999999988


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--------hHHHHHHh--hhhccCCCCCCHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--------PEEIRSKA--TDYMAAYKFGEKW  234 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~  234 (259)
                      ....|+++|+|+.+|+++++.|++ ++||+||+|+||+++|+.......        .++..+.+  ....|.+|+.+|+
T Consensus       155 ~~~~y~asKaal~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  233 (265)
T PRK07062        155 HMVATSAARAGLLNLVKSLATELA-PKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPD  233 (265)
T ss_pred             CchHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHH
Confidence            899999999999999999999998 889999999999999875432111        11111111  2456889999999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |++++++||+++.+.|+||+.|.+|
T Consensus       234 ~va~~~~~L~s~~~~~~tG~~i~vd  258 (265)
T PRK07062        234 EAARALFFLASPLSSYTTGSHIDVS  258 (265)
T ss_pred             HHHHHHHHHhCchhcccccceEEEc
Confidence            9999999999999999999999987

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-46  Score=312.43  Aligned_cols=237  Identities=24%  Similarity=0.248  Sum_probs=199.4

Q ss_pred             CCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         9 ~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .+++|+++||||+  +|||+++|+.|+++|++|++++|+.. ..+..+++. +.+ ...++++|++|+++++++++++.+
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHH
Confidence            4678999999997  89999999999999999999988632 222233332 223 356789999999999999999999


Q ss_pred             HcCCccEEEECCCCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           86 HFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        86 ~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      .+|++|++|||||+..    ..++.+.+.++|++.+++|+.+++.++|+++|+|.++          |+||++||..+..
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~----------g~Iv~iss~~~~~  154 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG----------GSILTLTYYGAEK  154 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC----------ceEEEEecccccc
Confidence            9999999999999764    2567788999999999999999999999999998542          8899999998888


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh-HHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      +.+.+..|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++.. .... +..........|.+|+.+|||+|+++
T Consensus       155 ~~p~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~p~~r~~~peevA~~~  232 (272)
T PRK08159        155 VMPHYNVMGVAKAALEASVKYLAVDLG-PKNIRVNAISAGPIKTLAAS-GIGDFRYILKWNEYNAPLRRTVTIEEVGDSA  232 (272)
T ss_pred             CCCcchhhhhHHHHHHHHHHHHHHHhc-ccCeEEEEeecCCcCCHHHh-cCCcchHHHHHHHhCCcccccCCHHHHHHHH
Confidence            888999999999999999999999998 89999999999999976432 1211 11222223356889999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.+.++||+.|.+|
T Consensus       233 ~~L~s~~~~~itG~~i~vd  251 (272)
T PRK08159        233 LYLLSDLSRGVTGEVHHVD  251 (272)
T ss_pred             HHHhCccccCccceEEEEC
Confidence            9999999999999999987

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.2e-46  Score=309.88  Aligned_cols=240  Identities=27%  Similarity=0.368  Sum_probs=211.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+.+.++.++.+|++++++++++++++.+.+|
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999 777888888876666799999999999999999999999999


Q ss_pred             CccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        89 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++         |+||++||..+..+.+...
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~~~  152 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG---------GSIINTSSFSGQAADLYRS  152 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---------CEEEEeCchhhcCCCCCCc
Confidence            9999999999864 45777889999999999999999999999999998652         8899999999999888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHH----HHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEE----IRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      .|++||+|+++|+++++.|++ ++||+||+|+||+++|++......  ++.    .........|.+|+.+|+|++++++
T Consensus       153 ~Y~asKaal~~l~~~la~e~~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  231 (272)
T PRK08589        153 GYNAAKGAVINFTKSIAIEYG-RDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVV  231 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHH
Confidence            999999999999999999998 899999999999999875433221  111    1111223467889999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+++.+.++||+.|.+|
T Consensus       232 ~l~s~~~~~~~G~~i~vd  249 (272)
T PRK08589        232 FLASDDSSFITGETIRID  249 (272)
T ss_pred             HHcCchhcCcCCCEEEEC
Confidence            999999999999999887

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.5e-46  Score=313.46  Aligned_cols=239  Identities=27%  Similarity=0.267  Sum_probs=202.4

Q ss_pred             CCCCCcEEEEeCC--ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc----------CC---CeEEEEcCC--
Q 024976            8 DILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL----------GI---PAIGLEGDV--   70 (259)
Q Consensus         8 ~~l~~k~~lItGa--~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~----------~~---~v~~~~~Dl--   70 (259)
                      ++|+||+++||||  ++|||+++|+.|+++|++|++ +|+.++++....++...          +.   ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4489999999999  899999999999999999998 78888887777666421          11   146788998  


Q ss_pred             CC------------------HHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHH
Q 024976           71 RK------------------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHE  130 (259)
Q Consensus        71 ~~------------------~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  130 (259)
                      ++                  +++++++++++.+.+|++|+||||||...  .+++.+.++++|++.+++|+.+++.++|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            33                  45899999999999999999999998542  36888999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCCCCCceEEEeccccccccCccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecccccCCcc
Q 024976          131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAG  208 (259)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~i~pg~v~t~~~  208 (259)
                      ++|.|.++          |+||++||..+..+.+.+ ..|++||+|+.+|+|+|+.|++ + +|||||+|+||+++|++.
T Consensus       164 ~~p~m~~~----------G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~-~~~gIrVn~V~PG~v~T~~~  232 (303)
T PLN02730        164 FGPIMNPG----------GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKYKIRVNTISAGPLGSRAA  232 (303)
T ss_pred             HHHHHhcC----------CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhC-cCCCeEEEEEeeCCccCchh
Confidence            99999753          889999999988887765 5899999999999999999997 6 799999999999998765


Q ss_pred             cCCCC-hHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          209 VSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       209 ~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      .. .. .++.........|++|+.+|+|++++++||+|+.+.++||+.|.+|
T Consensus       233 ~~-~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vd  283 (303)
T PLN02730        233 KA-IGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVD  283 (303)
T ss_pred             hc-ccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence            43 22 2333333344558889999999999999999999999999999887

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-46  Score=305.69  Aligned_cols=244  Identities=30%  Similarity=0.391  Sum_probs=216.2

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +...+++|+++||||++|||++++++|+++|++|++++|+ +..++..+.+...+.++.++.+|+++.++++++++++.+
T Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935          9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3356889999999999999999999999999999999998 556667677766666789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.        |+||++||..+..+.+.
T Consensus        88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  159 (258)
T PRK06935         88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGS--------GKIINIASMLSFQGGKF  159 (258)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCC--------eEEEEECCHHhccCCCC
Confidence            9999999999999877778888899999999999999999999999999988764        89999999999988888


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|+++|+|+++++++++.|++ ++|||||.|+||+++|+........+..........|.+|+.+|+|+++++.||+|
T Consensus       160 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  238 (258)
T PRK06935        160 VPAYTASKHGVAGLTKAFANELA-AYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLAS  238 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999998 89999999999999987543222222333344556788999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       239 ~~~~~~~G~~i~~d  252 (258)
T PRK06935        239 RASDYVNGHILAVD  252 (258)
T ss_pred             hhhcCCCCCEEEEC
Confidence            99999999999987

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-46  Score=307.72  Aligned_cols=244  Identities=25%  Similarity=0.319  Sum_probs=211.9

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +.++++|+++||||++|||+++++.|+++|++|++++| +.+.++...+++.. .+.++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999998865 55666666666653 35678999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCC------CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           85 NHFGKLDILVNAAAGNF------LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      +.++++|++|||||...      ..++.+.++++|++.+++|+.+++.+++.++|.|.+++.        |+||++||..
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~  154 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGG--------GSIISLSSTG  154 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCC--------EEEEEEeccc
Confidence            99999999999998642      346677888999999999999999999999999987653        8999999999


Q ss_pred             ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      +..+.+.+..|++||+|+++|+++++.|++ ++|||||+|+||+++|++.......++..+......|.+|+.+|+|+++
T Consensus       155 ~~~~~~~~~~Y~asK~a~~~~~~~la~el~-~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~  233 (260)
T PRK08416        155 NLVYIENYAGHGTSKAAVETMVKYAATELG-EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAG  233 (260)
T ss_pred             cccCCCCcccchhhHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            888888999999999999999999999998 8999999999999998764332222344445555678899999999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+++.+.+++|+.|.+|
T Consensus       234 ~~~~l~~~~~~~~~G~~i~vd  254 (260)
T PRK08416        234 ACLFLCSEKASWLTGQTIVVD  254 (260)
T ss_pred             HHHHHcChhhhcccCcEEEEc
Confidence            999999999999999999987

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=4.7e-47  Score=309.55  Aligned_cols=229  Identities=32%  Similarity=0.410  Sum_probs=206.4

Q ss_pred             CCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-CCccEEEE
Q 024976           19 GGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVN   95 (259)
Q Consensus        19 Ga~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g~id~li~   95 (259)
                      |++  +|||+++|++|+++|++|++++|+.+.++...+++.+... ..++.+|++++++++++++++.+.+ |++|+|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  9999999999999999999999999987666666654322 3369999999999999999999999 99999999


Q ss_pred             CCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           96 AAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        96 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      |+|....    .++.+.+.++|++.+++|+.+++.++|++.|+|.++          |+||++||..+..+.+.+..|++
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------gsii~iss~~~~~~~~~~~~y~~  149 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG----------GSIINISSIAAQRPMPGYSAYSA  149 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE----------EEEEEEEEGGGTSBSTTTHHHHH
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----------CCcccccchhhcccCccchhhHH
Confidence            9998765    677888999999999999999999999999988875          88999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCC-CCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCc
Q 024976          172 AKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVH  250 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~-~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (259)
                      +|+|+++|+|+++.||+ + +|||||+|+||++.|+........++..+...+..|++|+++|+|||++++||+|+.++|
T Consensus       150 sKaal~~l~r~lA~el~-~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~  228 (241)
T PF13561_consen  150 SKAALEGLTRSLAKELA-PKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASY  228 (241)
T ss_dssp             HHHHHHHHHHHHHHHHG-GHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhc-cccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999 8 999999999999997764333335667788889999999999999999999999999999


Q ss_pred             ccccccccC
Q 024976          251 RDLIHLLDD  259 (259)
Q Consensus       251 ~tG~~i~~D  259 (259)
                      ||||+|++|
T Consensus       229 itG~~i~vD  237 (241)
T PF13561_consen  229 ITGQVIPVD  237 (241)
T ss_dssp             GTSEEEEES
T ss_pred             ccCCeEEEC
Confidence            999999998

...

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-45  Score=306.90  Aligned_cols=242  Identities=31%  Similarity=0.406  Sum_probs=214.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++++++.++++++.+.++
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999998888888888876666789999999999999999999999999


Q ss_pred             CccEEEECCCCCCC---------------CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEE
Q 024976           89 KLDILVNAAAGNFL---------------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN  153 (259)
Q Consensus        89 ~id~li~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  153 (259)
                      ++|++|||||....               .++.+.+.++|++.+++|+.+++.+++++++.|.+++.        |+||+
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~ii~  158 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKG--------GNIIN  158 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------cEEEE
Confidence            99999999996432               34667889999999999999999999999999987654        89999


Q ss_pred             eccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-----hHHHHHHhhhhccCC
Q 024976          154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAY  228 (259)
Q Consensus       154 isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~  228 (259)
                      +||..++.+.+....|+++|+|+++|+|+++.|++ ++|||||+|+||++.|+.......     ..+..+.+....|.+
T Consensus       159 isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~  237 (278)
T PRK08277        159 ISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFA-KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMG  237 (278)
T ss_pred             EccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCcc
Confidence            99999999999999999999999999999999998 899999999999999875332211     122334455667899


Q ss_pred             CCCCHHHHHHHHHHhcCc-cCCcccccccccC
Q 024976          229 KFGEKWDIAMAALYLASD-AAVHRDLIHLLDD  259 (259)
Q Consensus       229 ~~~~~~dva~~~~~l~s~-~~~~~tG~~i~~D  259 (259)
                      |+++|+|+|++++||+|+ .+.++||+.|.+|
T Consensus       238 r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vd  269 (278)
T PRK08277        238 RFGKPEELLGTLLWLADEKASSFVTGVVLPVD  269 (278)
T ss_pred             CCCCHHHHHHHHHHHcCccccCCcCCCEEEEC
Confidence            999999999999999999 8999999999987

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-45  Score=304.36  Aligned_cols=237  Identities=17%  Similarity=0.213  Sum_probs=207.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.+|++|+++++++++++.+.++++|+|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            79999999999999999999999999999999988888888886544 68899999999999999999999999999999


Q ss_pred             EECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           94 VNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        94 i~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      |||||...  ..++.+.+.++|.+.+++|+.+++++++.++|.|.++..       +|+||++||..+..+.+....|++
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~y~~  153 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-------KGVLVYLSSVSVKEPMPPLVLADV  153 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-------CCEEEEEeCcccCCCCCCchHHHH
Confidence            99999753  345778889999999999999999999999999874321       389999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---------ChHH-HHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEE-IRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +|+|+.+|+|+++.|++ ++|||||+|+||+++|++.....         .+++ ..+.+....|.+|+++|+|||+++.
T Consensus       154 sKaa~~~~~~~la~e~~-~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~  232 (259)
T PRK08340        154 TRAGLVQLAKGVSRTYG-GKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIA  232 (259)
T ss_pred             HHHHHHHHHHHHHHHhC-CCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHH
Confidence            99999999999999998 89999999999999987643211         1122 2234455678999999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+|+.++++||+.|.+|
T Consensus       233 fL~s~~~~~itG~~i~vd  250 (259)
T PRK08340        233 FLLSENAEYMLGSTIVFD  250 (259)
T ss_pred             HHcCcccccccCceEeec
Confidence            999999999999999987

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-45  Score=307.40  Aligned_cols=241  Identities=23%  Similarity=0.295  Sum_probs=206.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh---------hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---------TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRV   79 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   79 (259)
                      .+++|+++||||++|||++++++|+++|++|++++++.         +.+++..+++...+.++.++.+|++|+++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            47899999999999999999999999999999998876         667777788876677788999999999999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        80 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      ++++.+.+|++|++|||||+....++.+.+.++|++.+++|+.+++.++|+++|+|.++....  ....|+||++||..+
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~--~~~~g~Iv~isS~~~  160 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAG--RAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccC--CCCCcEEEEeCchhh
Confidence            999999999999999999987777888899999999999999999999999999997642100  011379999999999


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCC--CCCCHHHHH
Q 024976          160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY--KFGEKWDIA  237 (259)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva  237 (259)
                      ..+.+.+..|++||+|+.+|+|+++.|++ ++|||||+|+|| +.|++...      .........+.+  ++.+|+|++
T Consensus       161 ~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~Pg-~~T~~~~~------~~~~~~~~~~~~~~~~~~pedva  232 (286)
T PRK07791        161 LQGSVGQGNYSAAKAGIAALTLVAAAELG-RYGVTVNAIAPA-ARTRMTET------VFAEMMAKPEEGEFDAMAPENVS  232 (286)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHHH-HhCeEEEEECCC-CCCCcchh------hHHHHHhcCcccccCCCCHHHHH
Confidence            99999999999999999999999999998 899999999999 77654311      111122222333  467999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++||+|+.+.++||+.|.+|
T Consensus       233 ~~~~~L~s~~~~~itG~~i~vd  254 (286)
T PRK07791        233 PLVVWLGSAESRDVTGKVFEVE  254 (286)
T ss_pred             HHHHHHhCchhcCCCCcEEEEc
Confidence            9999999999999999999887

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.3e-46  Score=305.40  Aligned_cols=237  Identities=24%  Similarity=0.213  Sum_probs=198.5

Q ss_pred             CCCCCcEEEEeCC--ccchHHHHHHHHHHcCCeEEEEeCCh--hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         8 ~~l~~k~~lItGa--~~giG~~~a~~l~~~G~~vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ..+++|+++||||  ++|||++++++|+++|++|++++|+.  +.++++.+++   +.++.++.+|++|+++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHH
Confidence            4478999999999  89999999999999999999998764  3334444433   335778999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           84 INHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      .+.+|++|++|||||+...    .++.+.++++|++.+++|+.+++.++++++|+|+++          |+||++++. +
T Consensus        80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~----------g~Iv~is~~-~  148 (256)
T PRK07889         80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG----------GSIVGLDFD-A  148 (256)
T ss_pred             HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC----------ceEEEEeec-c
Confidence            9999999999999997643    457788999999999999999999999999999742          789999875 3


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCC-CCCCHHHHHH
Q 024976          160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAM  238 (259)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~  238 (259)
                      ..+.+.+..|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++.......++..+...+..|.+ |+.+|+|+|+
T Consensus       149 ~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~  227 (256)
T PRK07889        149 TVAWPAYDWMGVAKAALESTNRYLARDLG-PRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVAR  227 (256)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHhh-hcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHH
Confidence            45567778899999999999999999998 899999999999999865332211223333344556777 6899999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+++.+.++||+.|.+|
T Consensus       228 ~v~~l~s~~~~~~tG~~i~vd  248 (256)
T PRK07889        228 AVVALLSDWFPATTGEIVHVD  248 (256)
T ss_pred             HHHHHhCcccccccceEEEEc
Confidence            999999999999999999887

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.7e-45  Score=307.23  Aligned_cols=240  Identities=27%  Similarity=0.313  Sum_probs=210.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh--hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++|+++||||++|||++++++|+++|++|++++|+.  +..+++.+.+...+.++.++.+|++|++++.++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999987653  3455555555555667889999999999999999999999


Q ss_pred             cCCccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           87 FGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      +|++|++|||||.. ...++.+.++++|++.+++|+.+++.++++++|+|.+.          |+||++||..++.+.+.
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~----------g~iv~iSS~~~~~~~~~  195 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG----------ASIITTSSIQAYQPSPH  195 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC----------CEEEEECCchhccCCCC
Confidence            99999999999975 34567788999999999999999999999999998642          78999999999999888


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|+++|+|+++|+++++.|++ ++|||||+|+||+++|++......+++....+....|.+|+++|+|||++++||+|
T Consensus       196 ~~~Y~asKaal~~l~~~la~el~-~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s  274 (294)
T PRK07985        196 LLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS  274 (294)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHh-HhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Confidence            99999999999999999999998 89999999999999987643222233444455667788999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       275 ~~~~~itG~~i~vd  288 (294)
T PRK07985        275 QESSYVTAEVHGVC  288 (294)
T ss_pred             hhcCCccccEEeeC
Confidence            99999999999987

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-45  Score=300.97  Aligned_cols=243  Identities=27%  Similarity=0.397  Sum_probs=219.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||+++||++++++|+++|++|++++|+.++.++..+.+...+.++.++.+|++|+++++++++++.+.+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999999888888877777666678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.++|.+++.        |+||++||..+..+.+.+.
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~iss~~~~~~~~~~~  157 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGA--------GKIINIASVQSALARPGIA  157 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC--------eEEEEEccchhccCCCCCc
Confidence            99999999999887788888999999999999999999999999999987654        8999999999888888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.++++++.|++ ++||+||+|+||+++|+........+.....+....|.+|+++|+|+|++++||+++.
T Consensus       158 ~y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  236 (255)
T PRK07523        158 PYTATKGAVGNLTKGMATDWA-KHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDA  236 (255)
T ss_pred             cHHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999999999999998 8999999999999997764433333444455666778899999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.++||+.|.+|
T Consensus       237 ~~~~~G~~i~~~  248 (255)
T PRK07523        237 SSFVNGHVLYVD  248 (255)
T ss_pred             hcCccCcEEEEC
Confidence            999999999887

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-45  Score=299.43  Aligned_cols=239  Identities=31%  Similarity=0.337  Sum_probs=205.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe-CChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH--
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH--   86 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~--   86 (259)
                      +++|+++||||++|||++++++|+++|++|++++ ++.+..++..+++...+.++..+.+|+++.+++..+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            5789999999999999999999999999998875 5666677777777766667888999999999999999888753  


Q ss_pred             --cC--CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           87 --FG--KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        87 --~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                        ++  ++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++.          |+||++||..+..+
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~----------g~iv~isS~~~~~~  151 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN----------SRIINISSAATRIS  151 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC----------CeEEEECCcccccC
Confidence              34  89999999998666678889999999999999999999999999999653          78999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      .++...|++||+|+++|+|+++.|++ ++|||||+|+||+++|++.......+..........|.+|+.+|+|+++++.|
T Consensus       152 ~~~~~~Y~~sKaa~~~~~~~la~e~~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  230 (252)
T PRK12747        152 LPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAF  230 (252)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHh-HcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHH
Confidence            99999999999999999999999998 89999999999999987643322222222222223467899999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.+.++||+.|.+|
T Consensus       231 l~s~~~~~~~G~~i~vd  247 (252)
T PRK12747        231 LASPDSRWVTGQLIDVS  247 (252)
T ss_pred             HcCccccCcCCcEEEec
Confidence            99999999999999887

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-44  Score=297.59  Aligned_cols=243  Identities=30%  Similarity=0.355  Sum_probs=218.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.++.+.+++.+.+.++.++++|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56889999999999999999999999999999999999888888888887766678899999999999999999999999


Q ss_pred             CCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +++|++|||+|... ..++.+.+.++|++.+++|+.+++.++++++|+|.++..        ++|+++||..+..+.+++
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~  155 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGG--------GSIVNVASVNGVSPGDFQ  155 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------cEEEEECchhhcCCCCCC
Confidence            99999999999753 466778899999999999999999999999999987654        899999999999888899


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|++||+++++|+++++.|+. ++||+||+|+||.++|++.......++..+......|.+|+.+|+|+|+.++||+++
T Consensus       156 ~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  234 (252)
T PRK07035        156 GIYSITKAAVISMTKAFAKECA-PFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASD  234 (252)
T ss_pred             cchHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCc
Confidence            9999999999999999999998 899999999999999876544333344444555667888999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.+++|+.|.+|
T Consensus       235 ~~~~~~g~~~~~d  247 (252)
T PRK07035        235 ASSYTTGECLNVD  247 (252)
T ss_pred             cccCccCCEEEeC
Confidence            9999999999887

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3.2e-45  Score=294.51  Aligned_cols=224  Identities=27%  Similarity=0.310  Sum_probs=201.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..+.+++++|||||+|||+++|++|+++|++|++++|+.++++++.+++.+. +..+.++.+|+++++++.++.+++.+.
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            3467899999999999999999999999999999999999999999999854 677999999999999999999999998


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      .+.||+||||||+...++|.+.++++.++++++|+.+...++++++|.|.+++.        |.||+++|.+++.|.|..
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~--------G~IiNI~S~ag~~p~p~~  153 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGA--------GHIINIGSAAGLIPTPYM  153 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------ceEEEEechhhcCCCcch
Confidence            899999999999999999999999999999999999999999999999999876        999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      +.|++||+++.+|+++|..|+. .+||+|..++||++.|+.+.....      ......+...+.+|+++|+..++.+..
T Consensus       154 avY~ATKa~v~~fSeaL~~EL~-~~gV~V~~v~PG~~~T~f~~~~~~------~~~~~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         154 AVYSATKAFVLSFSEALREELK-GTGVKVTAVCPGPTRTEFFDAKGS------DVYLLSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEEecCcccccccccccc------ccccccchhhccCHHHHHHHHHHHHhc
Confidence            9999999999999999999998 999999999999999654431111      111112334578999999999988764

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-45  Score=299.81  Aligned_cols=238  Identities=26%  Similarity=0.302  Sum_probs=205.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3478999999999999999999999999999999999987777666655   4568899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||||......+ +.++++|++.+++|+.+++.++++++|.|+ ++        +|+||++||..+..+.+...
T Consensus        79 g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~--------~g~ii~isS~~~~~~~~~~~  148 (261)
T PRK08265         79 GRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG--------GGAIVNFTSISAKFAQTGRW  148 (261)
T ss_pred             CCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC--------CcEEEEECchhhccCCCCCc
Confidence            999999999997654443 568899999999999999999999999997 33        28999999999999988999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh-HHHHHHh-hhhccCCCCCCHHHHHHHHHHhcC
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKA-TDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      .|+++|+++++|+++++.|++ ++||+||+|+||+++|++....... .+..+.. ....|.+|+.+|+|+|++++||++
T Consensus       149 ~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s  227 (261)
T PRK08265        149 LYPASKAAIRQLTRSMAMDLA-PDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCS  227 (261)
T ss_pred             hhHHHHHHHHHHHHHHHHHhc-ccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcC
Confidence            999999999999999999998 8999999999999997754321111 1111122 234688899999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       228 ~~~~~~tG~~i~vd  241 (261)
T PRK08265        228 DAASFVTGADYAVD  241 (261)
T ss_pred             ccccCccCcEEEEC
Confidence            99999999999987

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-44  Score=297.87  Aligned_cols=243  Identities=28%  Similarity=0.399  Sum_probs=215.7

Q ss_pred             CCCCCcEEEEeCCcc-chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cC-CCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGS-GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LG-IPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         8 ~~l~~k~~lItGa~~-giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..+++|+++||||+| |||+++++.|+++|++|++++|+.++++...+++.. .+ .++.++.+|++++++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            357789999999985 999999999999999999999998888887777765 33 468899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.+|++|+||||+|.....++.+.+.++|++.+++|+.+++.++++++|.|.++..       .|+||+++|..+..+.+
T Consensus        93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~  165 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH-------GGVIVNNASVLGWRAQH  165 (262)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCCC
Confidence            99999999999999877778888999999999999999999999999999987641       38999999999988888


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ....|+++|+|+++|+++++.|++ ++|||||+|+||+++|++.... .+++..+.+....|++|+.+|+|++++++||+
T Consensus       166 ~~~~Y~~sKaal~~~~~~la~e~~-~~gI~v~~i~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~  243 (262)
T PRK07831        166 GQAHYAAAKAGVMALTRCSALEAA-EYGVRINAVAPSIAMHPFLAKV-TSAELLDELAAREAFGRAAEPWEVANVIAFLA  243 (262)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeeCCccCcccccc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            899999999999999999999998 8999999999999998765433 23444445556678899999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      |+.+.++||+.|.+|
T Consensus       244 s~~~~~itG~~i~v~  258 (262)
T PRK07831        244 SDYSSYLTGEVVSVS  258 (262)
T ss_pred             CchhcCcCCceEEeC
Confidence            999999999999987

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-44  Score=297.24  Aligned_cols=243  Identities=26%  Similarity=0.334  Sum_probs=218.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++.+++.++++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999888888888887777789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      |++|++|||+|.... .++.+.+.++|++.+++|+.+++.++++++|+|.+++.        ++||++||..+..+.+++
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~ii~~sS~~~~~~~~~~  154 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGG--------GAIVNTASVAGLGAAPKM  154 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEECchhhccCCCCC
Confidence            999999999997644 45778899999999999999999999999999987654        889999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-hHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ..|+++|+++++|+++++.|+. ++||+||+|+||+++|++...... +++..+.+....|.+|+.+|+|+++.++||++
T Consensus       155 ~~Y~~sKaa~~~~~~~la~e~~-~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~  233 (253)
T PRK06172        155 SIYAASKHAVIGLTKSAAIEYA-KKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCS  233 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhC
Confidence            9999999999999999999998 889999999999999876544322 34444556667788899999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       234 ~~~~~~~G~~i~~d  247 (253)
T PRK06172        234 DGASFTTGHALMVD  247 (253)
T ss_pred             ccccCcCCcEEEEC
Confidence            99999999999987

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-45  Score=307.05  Aligned_cols=240  Identities=23%  Similarity=0.257  Sum_probs=198.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh----------hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK----------TVLRSAVAALHSLGIPAIGLEGDVRKREDAV   77 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~----------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~   77 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.          +.+++..+++...+.++.++++|++++++++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   83 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR   83 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            457899999999999999999999999999999999973          3456666677666667889999999999999


Q ss_pred             HHHHHHHHHcCCccEEEECC-CCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEE
Q 024976           78 RVVESTINHFGKLDILVNAA-AGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII  152 (259)
Q Consensus        78 ~~~~~~~~~~g~id~li~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv  152 (259)
                      ++++++.+.+|++|++|||| |...    ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.        |+||
T Consensus        84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~--------g~IV  155 (305)
T PRK08303         84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPG--------GLVV  155 (305)
T ss_pred             HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCC--------cEEE
Confidence            99999999999999999999 7431    256778889999999999999999999999999987643        8999


Q ss_pred             Eeccccccc---cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC--ChHHHHHHhhhhcc-
Q 024976          153 NISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMA-  226 (259)
Q Consensus       153 ~isS~~~~~---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~-  226 (259)
                      ++||..+..   +.+....|++||+|+.+|+|+|+.|++ +.|||||+|+||+++|++.....  .++..... ....| 
T Consensus       156 ~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~p~  233 (305)
T PRK08303        156 EITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELA-PHGATAVALTPGWLRSEMMLDAFGVTEENWRDA-LAKEPH  233 (305)
T ss_pred             EECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEecCCccccHHHHHhhccCccchhhh-hccccc
Confidence            999976543   334567899999999999999999998 89999999999999987532211  11111111 22345 


Q ss_pred             CCCCCCHHHHHHHHHHhcCccC-Ccccccccc
Q 024976          227 AYKFGEKWDIAMAALYLASDAA-VHRDLIHLL  257 (259)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~~~-~~~tG~~i~  257 (259)
                      .+++.+|+|+|++++||+|+.+ .|+|||.|.
T Consensus       234 ~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        234 FAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             cccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            4677899999999999999874 699999875

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=2.3e-44  Score=294.78  Aligned_cols=241  Identities=32%  Similarity=0.439  Sum_probs=210.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.  .++..+.+...+.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999865  3445555555566789999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.+++.       .|+||++||..++.+.+....
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~  152 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR-------GGKIINIASMLSFQGGIRVPS  152 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEecHHhccCCCCCch
Confidence            9999999999877777788899999999999999999999999999976541       289999999998888888899


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+++|+++++++++++.|+. ++||+||+|+||+++|++.......+..........|.+|+.+|+|+|++++||+++.+
T Consensus       153 Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (248)
T TIGR01832       153 YTASKHGVAGLTKLLANEWA-AKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSAS  231 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999998 89999999999999987543322222233344556788999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .+++|+.|.+|
T Consensus       232 ~~~~G~~i~~d  242 (248)
T TIGR01832       232 DYVNGYTLAVD  242 (248)
T ss_pred             cCcCCcEEEeC
Confidence            99999999987

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-44  Score=299.04  Aligned_cols=238  Identities=28%  Similarity=0.319  Sum_probs=205.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            4478999999999999999999999999999999999988776665554   3467889999999999999999999999


Q ss_pred             CCccEEEECCCCCC-CCCCCCCCHHH----HHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           88 GKLDILVNAAAGNF-LVPAEDLSPNG----FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        88 g~id~li~~ag~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +++|+||||||+.. ..++.+.++++    |++.+++|+.+++.++++++|.|.++.         |+||+++|..++.+
T Consensus        79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---------g~iv~~sS~~~~~~  149 (263)
T PRK06200         79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG---------GSMIFTLSNSSFYP  149 (263)
T ss_pred             CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC---------CEEEEECChhhcCC
Confidence            99999999999764 35566666665    889999999999999999999987642         88999999999998


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---------ChHHHHHHhhhhccCCCCCCH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~  233 (259)
                      .++...|++||+|+++|+++++.|++ + +||||+|+||+++|++.....         ..++..+.+....|++|+.+|
T Consensus       150 ~~~~~~Y~~sK~a~~~~~~~la~el~-~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  227 (263)
T PRK06200        150 GGGGPLYTASKHAVVGLVRQLAYELA-P-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQP  227 (263)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHh-c-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCH
Confidence            88889999999999999999999998 6 499999999999987542210         012233445566789999999


Q ss_pred             HHHHHHHHHhcCcc-CCcccccccccC
Q 024976          234 WDIAMAALYLASDA-AVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~-~~~~tG~~i~~D  259 (259)
                      +|++++++||+|+. +.|+||+.|.+|
T Consensus       228 ~eva~~~~fl~s~~~~~~itG~~i~vd  254 (263)
T PRK06200        228 EDHTGPYVLLASRRNSRALTGVVINAD  254 (263)
T ss_pred             HHHhhhhhheecccccCcccceEEEEc
Confidence            99999999999998 999999999987

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-44  Score=295.17  Aligned_cols=238  Identities=25%  Similarity=0.279  Sum_probs=209.7

Q ss_pred             CCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCC-----------hhhHHHHHHHHHhcCCCeEEEEcCCCCHH
Q 024976            8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRR-----------KTVLRSAVAALHSLGIPAIGLEGDVRKRE   74 (259)
Q Consensus         8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~-----------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   74 (259)
                      ..++||+++||||+  +|||+++|++|+++|++|+++++.           .+.+.+..+++...+.++.++.+|+++++
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            35889999999999  599999999999999999987532           22334455666666778999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 024976           75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI  154 (259)
Q Consensus        75 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i  154 (259)
                      +++++++++.+.+|++|++|||||.....++.+.+.++|++.+++|+.+++.+.++++|.|.++..        |+||++
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~i  153 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSG--------GRIINM  153 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC--------eEEEEE
Confidence            999999999999999999999999877778889999999999999999999999999999987654        899999


Q ss_pred             ccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHH
Q 024976          155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW  234 (259)
Q Consensus       155 sS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (259)
                      ||..+..+.+++..|+++|+++++|+++++.|++ ++||+||+|+||+++|+...     ++..+......|.+++.+|+
T Consensus       154 sS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~PG~i~t~~~~-----~~~~~~~~~~~~~~~~~~~~  227 (256)
T PRK12859        154 TSGQFQGPMVGELAYAATKGAIDALTSSLAAEVA-HLGITVNAINPGPTDTGWMT-----EEIKQGLLPMFPFGRIGEPK  227 (256)
T ss_pred             cccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEEccccCCCCC-----HHHHHHHHhcCCCCCCcCHH
Confidence            9999999989999999999999999999999998 88999999999999976432     23334445566888899999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.++||+++.+.++||+.|.+|
T Consensus       228 d~a~~~~~l~s~~~~~~~G~~i~~d  252 (256)
T PRK12859        228 DAARLIKFLASEEAEWITGQIIHSE  252 (256)
T ss_pred             HHHHHHHHHhCccccCccCcEEEeC
Confidence            9999999999999999999999987

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=2.5e-44  Score=302.45  Aligned_cols=241  Identities=26%  Similarity=0.350  Sum_probs=211.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh--hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+++|++|||||++|||+++++.|+++|++|++++++.+  ..++..+.+...+.++.++.+|+++.++++++++++.+
T Consensus        51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999998877543  34556666666677788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           86 HFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        86 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+.          ++||++||..++.+.+
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------~~iv~~sS~~~~~~~~  200 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG----------ASIINTGSIQSYQPSP  200 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC----------CEEEEECCccccCCCC
Confidence            9999999999999753 4567888999999999999999999999999998642          7899999999999988


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ....|++||+++++|+++++.|+. ++||+||+|+||+++|++.......++....+....|.+|+++|+|++++++||+
T Consensus       201 ~~~~Y~asK~a~~~~~~~la~el~-~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~  279 (300)
T PRK06128        201 TLLDYASTKAAIVAFTKALAKQVA-EKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLA  279 (300)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999998 8999999999999998764332223344445556678999999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.++||+.|.+|
T Consensus       280 s~~~~~~~G~~~~v~  294 (300)
T PRK06128        280 SQESSYVTGEVFGVT  294 (300)
T ss_pred             CccccCccCcEEeeC
Confidence            999999999999887

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=3.8e-44  Score=295.05  Aligned_cols=245  Identities=28%  Similarity=0.358  Sum_probs=220.4

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +++.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999988888888777654  457889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+.++++|+||||+|.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.        ++||++||..+..+.
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~ii~~sS~~~~~~~  154 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHAS--------SAIVNIGSVSGLTHV  154 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------ceEEEECccccCCCC
Confidence            999999999999999876677778899999999999999999999999999987654        889999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +....|+++|++++.|+++++.|+. ++||++|+|+||+++|++.......++..+......|.+++.+|+|++.+++||
T Consensus       155 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  233 (257)
T PRK09242        155 RSGAPYGMTKAALLQMTRNLAVEWA-EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFL  233 (257)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            8999999999999999999999998 889999999999999887655444455555556677888999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++...+++|+.|.+|
T Consensus       234 ~~~~~~~~~g~~i~~~  249 (257)
T PRK09242        234 CMPAASYITGQCIAVD  249 (257)
T ss_pred             hCcccccccCCEEEEC
Confidence            9998999999999887

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-44  Score=294.00  Aligned_cols=241  Identities=40%  Similarity=0.580  Sum_probs=211.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            68999999999999999999999999999999998888888777766566789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ++|||+|.....++.+.+.++|++.+++|+.+++.++|+++++|.++..       .|+||++||..+..+.+....|++
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~  153 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAA  153 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC-------CEEEEEEcChhhccCCCCCcchHH
Confidence            9999999765667788999999999999999999999999999876431       389999999999888888899999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-CChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVH  250 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (259)
                      +|+|+++|+|+|+.|+...+||+||+|+||+++|+.+... ...++..+...+..|.+|+.+|+|+++++.||+++.+.+
T Consensus       154 sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  233 (252)
T PRK07677        154 AKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAY  233 (252)
T ss_pred             HHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccc
Confidence            9999999999999999634699999999999986543222 223444455556678889999999999999999999999


Q ss_pred             ccccccccC
Q 024976          251 RDLIHLLDD  259 (259)
Q Consensus       251 ~tG~~i~~D  259 (259)
                      +||+.|.+|
T Consensus       234 ~~g~~~~~~  242 (252)
T PRK07677        234 INGTCITMD  242 (252)
T ss_pred             cCCCEEEEC
Confidence            999999987

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.6e-44  Score=297.48  Aligned_cols=231  Identities=25%  Similarity=0.377  Sum_probs=203.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..           .++.++.||++|+++++++++++.+.+
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~   70 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY   70 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999886431           157899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.        |+||++||..+..+.+++.
T Consensus        71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~  142 (258)
T PRK06398         71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDK--------GVIINIASVQSFAVTRNAA  142 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------eEEEEeCcchhccCCCCCc
Confidence            99999999999877778889999999999999999999999999999987654        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC------ChHHH---HHHhhhhccCCCCCCHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEI---RSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~dva~  238 (259)
                      .|+++|+|+++|+|+++.|++ +. |+||+|+||+++|++.....      .++..   ...+....|.+|+.+|+|+++
T Consensus       143 ~Y~~sKaal~~~~~~la~e~~-~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~  220 (258)
T PRK06398        143 AYVTSKHAVLGLTRSIAVDYA-PT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAY  220 (258)
T ss_pred             hhhhhHHHHHHHHHHHHHHhC-CC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHH
Confidence            999999999999999999997 65 99999999999987543211      11111   122344568899999999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+++.+.++||+.|.+|
T Consensus       221 ~~~~l~s~~~~~~~G~~i~~d  241 (258)
T PRK06398        221 VVAFLASDLASFITGECVTVD  241 (258)
T ss_pred             HHHHHcCcccCCCCCcEEEEC
Confidence            999999999999999999987

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=5.1e-44  Score=294.09  Aligned_cols=240  Identities=28%  Similarity=0.334  Sum_probs=213.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++||||++|||+++++.|+++|++|++++|+.+.++...+++...+.++.++.+|++++++++++++++.+.++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999999999998888888888876666788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ++|||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.+.+.       +++||++||..+..+.++...|++
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~  154 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH-------GGKIINATSQAGVVGNPELAVYSS  154 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CCEEEEECccccccCCCCCchhHH
Confidence            9999999877778888899999999999999999999999999976532       378999999999999888999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---------ChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      +|++++.|++.++.|+. ++||+||+|+||+++|+......         ........+....|.+|+.+|+|+++++.|
T Consensus       155 sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (256)
T PRK08643        155 TKFAVRGLTQTAARDLA-SEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSF  233 (256)
T ss_pred             HHHHHHHHHHHHHHHhc-ccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence            99999999999999998 89999999999999987643211         111122334556788999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.+.++||+.|.+|
T Consensus       234 L~~~~~~~~~G~~i~vd  250 (256)
T PRK08643        234 LAGPDSDYITGQTIIVD  250 (256)
T ss_pred             HhCccccCccCcEEEeC
Confidence            99999999999999987

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-44  Score=294.38  Aligned_cols=244  Identities=30%  Similarity=0.470  Sum_probs=215.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+. +..+...+++...+.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999888854 4456667777666677889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++++|.+++.       .|+||++||..+..+.+.+
T Consensus        83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~-------~g~iv~~sS~~~~~~~~~~  155 (261)
T PRK08936         83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI-------KGNIINMSSVHEQIPWPLF  155 (261)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEEccccccCCCCCC
Confidence            999999999999877777888899999999999999999999999999987542       3899999999999998999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+++|+|+++++++++.|+. +.||+||+|+||+++|++....+..++.........|.+++.+|+|+++.+.||+++
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  234 (261)
T PRK08936        156 VHYAASKGGVKLMTETLAMEYA-PKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASS  234 (261)
T ss_pred             cccHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999998 889999999999999876544443344444455667889999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.+++|+.|.+|
T Consensus       235 ~~~~~~G~~i~~d  247 (261)
T PRK08936        235 EASYVTGITLFAD  247 (261)
T ss_pred             ccCCccCcEEEEC
Confidence            9999999999987

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.1e-43  Score=291.97  Aligned_cols=247  Identities=30%  Similarity=0.423  Sum_probs=218.0

Q ss_pred             CCCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976            1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus         1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      |.++ ..+.+++|+++||||++|||+++++.|+++|++|++++|+.+..+...+++...+.++.++.+|+++.+++.+++
T Consensus         1 ~~~~-~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   79 (255)
T PRK06113          1 MFNS-DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_pred             CCCc-cccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            5555 334688999999999999999999999999999999999988888888887766667889999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +.+.+.++++|++|||+|.....++ +.+.++|++.+++|+.+++.+++++.|+|.+.+.        ++||++||..+.
T Consensus        80 ~~~~~~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~  150 (255)
T PRK06113         80 DFALSKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGG--------GVILTITSMAAE  150 (255)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC--------cEEEEEeccccc
Confidence            9999999999999999997655555 6788999999999999999999999999976543        789999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+.++...|+++|+|+++|+++++.++. .+|||||.|+||+++|+....... ++......+..|..++++|+|+++++
T Consensus       151 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~  228 (255)
T PRK06113        151 NKNINMTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAA  228 (255)
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecccccccccccccC-HHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9988899999999999999999999998 899999999999999876544333 33444455667888899999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+++.+.+++|+.|.+|
T Consensus       229 ~~l~~~~~~~~~G~~i~~~  247 (255)
T PRK06113        229 LFLCSPAASWVSGQILTVS  247 (255)
T ss_pred             HHHcCccccCccCCEEEEC
Confidence            9999999999999999887

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-44  Score=292.88  Aligned_cols=246  Identities=31%  Similarity=0.380  Sum_probs=222.1

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +.+..+++|+++||||+++||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++++++.++++++.
T Consensus         4 ~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          4 LQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999999888888888887667779999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+++++.|.+++.        ++||++||..+..+.+
T Consensus        84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~ss~~~~~~~~  155 (256)
T PRK06124         84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGY--------GRIIAITSIAGQVARA  155 (256)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEeechhccCCC
Confidence            99999999999999877778888999999999999999999999999999987654        8899999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ....|+++|++++++++.++.|++ +.||++|.|+||.++|+.......+++....+....|.+++.+|+|++++++||+
T Consensus       156 ~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  234 (256)
T PRK06124        156 GDAVYPAAKQGLTGLMRALAAEFG-PHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLA  234 (256)
T ss_pred             CccHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999998 8899999999999998764443334444555566678889999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.++||+.|.+|
T Consensus       235 ~~~~~~~~G~~i~~d  249 (256)
T PRK06124        235 SPAASYVNGHVLAVD  249 (256)
T ss_pred             CcccCCcCCCEEEEC
Confidence            999999999999987

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-43  Score=292.94  Aligned_cols=245  Identities=31%  Similarity=0.412  Sum_probs=217.0

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+...+.++.++.+|++++++++++++++.+
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999998888888888876677899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .++++|+||||+|.....++.+.+.++|++.+++|+.+++.++++++|+|++++.        ++||++||..+..+.+.
T Consensus        84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  155 (265)
T PRK07097         84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGH--------GKIINICSMMSELGRET  155 (265)
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcCccccCCCCC
Confidence            9999999999999887778888999999999999999999999999999987654        89999999988888888


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC------hHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA------PEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      +..|+++|++++.|+++++.|+. +.||+||+|+||.+.|+.......      .......+....|.+++.+|+|+|++
T Consensus       156 ~~~Y~~sKaal~~l~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  234 (265)
T PRK07097        156 VSAYAAAKGGLKMLTKNIASEYG-EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGP  234 (265)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhh-hcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHH
Confidence            99999999999999999999998 899999999999999875432211      11222334455678899999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+++.+.+++|+.|.+|
T Consensus       235 ~~~l~~~~~~~~~g~~~~~~  254 (265)
T PRK07097        235 AVFLASDASNFVNGHILYVD  254 (265)
T ss_pred             HHHHhCcccCCCCCCEEEEC
Confidence            99999999999999999876

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-43  Score=291.69  Aligned_cols=235  Identities=29%  Similarity=0.384  Sum_probs=206.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.        ...+.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   73 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH   73 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998654        1224568899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.+++++.+.|.++..       .|+||++||..+..+.+...
T Consensus        74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~  146 (252)
T PRK07856         74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG-------GGSIVNIGSVSGRRPSPGTA  146 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEEcccccCCCCCCCc
Confidence            99999999999877677788899999999999999999999999999986422       38899999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+++++|+++++.|++ ++ |++|.|+||+++|++.......++..+.+....|.+|+.+|+|++++++||+++.
T Consensus       147 ~Y~~sK~a~~~l~~~la~e~~-~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~  224 (252)
T PRK07856        147 AYGAAKAGLLNLTRSLAVEWA-PK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDL  224 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhc-CC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999998 76 9999999999998764333333343444556678899999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.++||+.|.+|
T Consensus       225 ~~~i~G~~i~vd  236 (252)
T PRK07856        225 ASYVSGANLEVH  236 (252)
T ss_pred             cCCccCCEEEEC
Confidence            999999999987

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-43  Score=291.77  Aligned_cols=238  Identities=31%  Similarity=0.404  Sum_probs=203.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++++.+..   .+++...  ++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999887664322   2233322  47889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cCccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~  166 (259)
                      +++|+||||||.....++.+.++++|++.+++|+.+++++++.++|+|.+++.        |+||++||..++. +.++.
T Consensus        78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~--------g~iv~isS~~~~~~~~~~~  149 (255)
T PRK06463         78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKN--------GAIVNIASNAGIGTAAEGT  149 (255)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcCHHhCCCCCCCc
Confidence            99999999999876677888899999999999999999999999999986654        8999999988874 44677


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH---HHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ..|++||+|+++|+++++.|++ +.||+||.|+||+++|++......++   .....+....|.+|+.+|+|++++++||
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  228 (255)
T PRK06463        150 TFYAITKAGIIILTRRLAFELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFL  228 (255)
T ss_pred             cHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHH
Confidence            8899999999999999999998 89999999999999987653322221   2333455667888999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.++||+.|.+|
T Consensus       229 ~s~~~~~~~G~~~~~d  244 (255)
T PRK06463        229 ASDDARYITGQVIVAD  244 (255)
T ss_pred             cChhhcCCCCCEEEEC
Confidence            9999999999999987

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-44  Score=301.37  Aligned_cols=241  Identities=27%  Similarity=0.286  Sum_probs=190.5

Q ss_pred             CCCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH----------hcCC-------------
Q 024976            7 GDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH----------SLGI-------------   61 (259)
Q Consensus         7 ~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~----------~~~~-------------   61 (259)
                      +.+++||+++|||++  +|||+++|+.|+++|++|++.++.+ .++...+...          ..+.             
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            456899999999996  9999999999999999999976541 1111100000          0011             


Q ss_pred             --CeEEEEcCCCC--------HHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHH
Q 024976           62 --PAIGLEGDVRK--------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCH  129 (259)
Q Consensus        62 --~v~~~~~Dl~~--------~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~  129 (259)
                        ...-+.+|+++        .++++++++++.+.+|++|+||||||...  ..++.+.++++|++.+++|+.++++++|
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence              11122222222        24689999999999999999999999643  4688899999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch-hhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecccccCCc
Q 024976          130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~i~pg~v~t~~  207 (259)
                      +++|+|.++          |+||+++|..+..+.+.+. .|++||+|+.+|+|+|+.|++ + +|||||+|+||++.|++
T Consensus       162 a~~p~m~~~----------G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~-~~~gIrVn~V~PG~v~T~~  230 (299)
T PRK06300        162 HFGPIMNPG----------GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAG-RRWGIRVNTISAGPLASRA  230 (299)
T ss_pred             HHHHHhhcC----------CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEEeCCccChh
Confidence            999999653          7899999999988887764 899999999999999999997 6 59999999999999875


Q ss_pred             ccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          208 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ......+++..+......|.+|+.+|+|++++++||+|+.+.|+||+.|.+|
T Consensus       231 ~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vd  282 (299)
T PRK06300        231 GKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVD  282 (299)
T ss_pred             hhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence            4321112233334445678899999999999999999999999999999987

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-43  Score=290.30  Aligned_cols=241  Identities=31%  Similarity=0.369  Sum_probs=212.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.+++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERF   78 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999988777766555   3458899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||+|.....++.+.+.++|+..+++|+.+++.++++++++|.++..       +|+||++||..+..+.++..
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~  151 (257)
T PRK07067         79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR-------GGKIINMASQAGRRGEALVS  151 (257)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC-------CcEEEEeCCHHhCCCCCCCc
Confidence            99999999999877778888899999999999999999999999999976532       37899999998888888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---------CChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      .|++||++++.|+|+++.|+. ++||+||.|+||+++|+.....         ..+.+......+..|.+|+.+|+|+|+
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (257)
T PRK07067        152 HYCATKAAVISYTQSAALALI-RHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTG  230 (257)
T ss_pred             hhhhhHHHHHHHHHHHHHHhc-ccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHH
Confidence            999999999999999999998 8999999999999998653221         112333444556778999999999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+++.+.+++|+.+.+|
T Consensus       231 ~~~~l~s~~~~~~~g~~~~v~  251 (257)
T PRK07067        231 MALFLASADADYIVAQTYNVD  251 (257)
T ss_pred             HHHHHhCcccccccCcEEeec
Confidence            999999999999999999987

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-43  Score=290.76  Aligned_cols=239  Identities=23%  Similarity=0.256  Sum_probs=209.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++++|+++|||+++|||+++++.|+++|++|++++|+.+++++..+++... +.++.++.+|+++++++++++++    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            3478999999999999999999999999999999999988888877777643 55788999999999999988764    


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++++|++|||+|.....++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+..+.+.+
T Consensus        79 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~iss~~~~~~~~~~  150 (259)
T PRK06125         79 AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGS--------GVIVNVIGAAGENPDADY  150 (259)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------cEEEEecCccccCCCCCc
Confidence            479999999999877778889999999999999999999999999999987654        889999999998888888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC--------CChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--------LAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      ..|+++|+|+++|+++++.|+. ++|||||+|+||+++|+.....        +.+++..+.+....|.+|+.+|+|+++
T Consensus       151 ~~y~ask~al~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  229 (259)
T PRK06125        151 ICGSAGNAALMAFTRALGGKSL-DDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVAD  229 (259)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHH
Confidence            8999999999999999999998 8999999999999998753221        112333344555678889999999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+++.+.++||+.|.+|
T Consensus       230 ~~~~l~~~~~~~~~G~~i~vd  250 (259)
T PRK06125        230 LVAFLASPRSGYTSGTVVTVD  250 (259)
T ss_pred             HHHHHcCchhccccCceEEec
Confidence            999999999999999999987

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.6e-46  Score=273.21  Aligned_cols=236  Identities=27%  Similarity=0.341  Sum_probs=218.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +|.|+++++||+.-|||++++.+|++.|+.|+.+.|+++.+..+.++..   ..+..+..|+++++.+.+.+...    +
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v----~   76 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPV----F   76 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhccc----C
Confidence            5789999999999999999999999999999999999998888877753   34788999999998887776543    6


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|.++||||+....+|.+.+.++|.+.|++|+.+.+...|...+.+..+..       +|.||++||.++..+......
T Consensus        77 pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~-------~GaIVNvSSqas~R~~~nHtv  149 (245)
T KOG1207|consen   77 PIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI-------KGAIVNVSSQASIRPLDNHTV  149 (245)
T ss_pred             chhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC-------CceEEEecchhcccccCCceE
Confidence            8999999999998999999999999999999999999999998887765543       488999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      ||++|+|+++++|+|+.|++ +++||||++.|-.+.|.+....+.++...+...+.+|++|+...+||.++++||+|+.+
T Consensus       150 YcatKaALDmlTk~lAlELG-p~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  150 YCATKAALDMLTKCLALELG-PQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             EeecHHHHHHHHHHHHHhhC-cceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCc
Confidence            99999999999999999999 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      ++.||.+|++|
T Consensus       229 smttGstlpve  239 (245)
T KOG1207|consen  229 SMTTGSTLPVE  239 (245)
T ss_pred             CcccCceeeec
Confidence            99999999986

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-43  Score=290.01  Aligned_cols=240  Identities=27%  Similarity=0.396  Sum_probs=205.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.. .++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            4478999999999999999999999999999999999853 456666666666678899999999999999999999999


Q ss_pred             CCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.        |+||++||..+..  ...
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~~sS~~~~~--~~~  152 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGG--------GAIVNVSSIATRG--INR  152 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CeEEEEcCccccC--CCC
Confidence            99999999999653 467788899999999999999999999999999987654        8899999987652  345


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC--C---C------ChHHHHHHhhhhccCCCCCCHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS--K---L------APEEIRSKATDYMAAYKFGEKWD  235 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~--~---~------~~~~~~~~~~~~~~~~~~~~~~d  235 (259)
                      ..|++||+|+++|+++++.|++ ++||+||+|+||+++|++...  .   .      ..++.........|++|+++|+|
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  231 (260)
T PRK12823        153 VPYSAAKGGVNALTASLAFEYA-EHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDE  231 (260)
T ss_pred             CccHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHH
Confidence            6799999999999999999998 889999999999999874210  0   0      01123334445678899999999


Q ss_pred             HHHHHHHhcCccCCcccccccccC
Q 024976          236 IAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       236 va~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++++||+|+.+.++||+.+.+|
T Consensus       232 va~~~~~l~s~~~~~~~g~~~~v~  255 (260)
T PRK12823        232 QVAAILFLASDEASYITGTVLPVG  255 (260)
T ss_pred             HHHHHHHHcCcccccccCcEEeec
Confidence            999999999999999999999887

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.2e-44  Score=290.07  Aligned_cols=197  Identities=31%  Similarity=0.429  Sum_probs=179.7

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CC-CeEEEEcCCCCHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GI-PAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~-~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      .+..+.||+++|||||+|||.++|.+|+++|++++++.|+.++++...+++.+. .. +++.++||++|.++++++++.+
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999999999998888755 33 4999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+.||++|+||||||+.....+++.+.+++.+.|++|++|+..++|+++|+|++++.        |+||++||.+|..+.
T Consensus        86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~--------GhIVvisSiaG~~~~  157 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRND--------GHIVVISSIAGKMPL  157 (282)
T ss_pred             HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCC--------CeEEEEeccccccCC
Confidence            999999999999999988667778889999999999999999999999999999875        999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEecccccCCcccCCC
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIKDTAGVSKL  212 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~g--i~v~~i~pg~v~t~~~~~~~  212 (259)
                      |....|++||+|+.+|.++|+.|+. ..+  |++ .|+||+|+|+......
T Consensus       158 P~~~~Y~ASK~Al~~f~etLR~El~-~~~~~i~i-~V~PG~V~Te~~~~~~  206 (282)
T KOG1205|consen  158 PFRSIYSASKHALEGFFETLRQELI-PLGTIIII-LVSPGPIETEFTGKEL  206 (282)
T ss_pred             CcccccchHHHHHHHHHHHHHHHhh-ccCceEEE-EEecCceeecccchhh
Confidence            9999999999999999999999998 766  666 9999999987554433

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-43  Score=289.46  Aligned_cols=246  Identities=39%  Similarity=0.580  Sum_probs=214.2

Q ss_pred             CCCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976            1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus         1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      |++.+   .+++|+++||||++|||.+++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++++++++++
T Consensus         1 ~~~~~---~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~   77 (264)
T PRK07576          1 MTTMF---DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAF   77 (264)
T ss_pred             CCccc---cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHH
Confidence            45544   488999999999999999999999999999999999988877777777665667889999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +++.+.++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++         |+||++||..+.
T Consensus        78 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~---------g~iv~iss~~~~  148 (264)
T PRK07576         78 AQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG---------ASIIQISAPQAF  148 (264)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---------CEEEEECChhhc
Confidence            99999999999999999977667778889999999999999999999999999987542         789999999988


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc-ccCCCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA-GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      .+.+.+..|+++|+++++|+++++.|+. .+||+|+.|+||+++++. .....+++..........|.+|+.+|+|+++.
T Consensus       149 ~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  227 (264)
T PRK07576        149 VPMPMQAHVCAAKAGVDMLTRTLALEWG-PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANA  227 (264)
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            8888899999999999999999999998 889999999999997433 32222333333344455788889999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+++.+.+++|+.|.+|
T Consensus       228 ~~~l~~~~~~~~~G~~~~~~  247 (264)
T PRK07576        228 ALFLASDMASYITGVVLPVD  247 (264)
T ss_pred             HHHHcChhhcCccCCEEEEC
Confidence            99999998999999999887

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-43  Score=289.49  Aligned_cols=242  Identities=25%  Similarity=0.324  Sum_probs=210.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+ ..+..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999864 444555555556678899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-cccCccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~~~~  166 (259)
                      +++|++|||+|.....++.+.+.+++++.+++|+.+++.++++++++|.+.+.        ++||++||..+ ..+.+++
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~  152 (263)
T PRK08226         81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKD--------GRIVMMSSVTGDMVADPGE  152 (263)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------cEEEEECcHHhcccCCCCc
Confidence            99999999999877778888899999999999999999999999999877553        78999999877 4566778


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC------ChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      ..|+++|+++++++++++.|+. ++||+||+|+||.++|++.....      ..++....+....|.+|+.+|+|+++.+
T Consensus       153 ~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~  231 (263)
T PRK08226        153 TAYALTKAAIVGLTKSLAVEYA-QSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELA  231 (263)
T ss_pred             chHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence            8999999999999999999998 88999999999999987543211      1233444555667889999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+++.+.++||++|.+|
T Consensus       232 ~~l~~~~~~~~~g~~i~~d  250 (263)
T PRK08226        232 AFLASDESSYLTGTQNVID  250 (263)
T ss_pred             HHHcCchhcCCcCceEeEC
Confidence            9999999999999999988

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.3e-43  Score=292.74  Aligned_cols=237  Identities=28%  Similarity=0.367  Sum_probs=199.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.   .+.++.++.+|+++.++++++++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFG   78 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999999988766655432   245688999999999999999999999999


Q ss_pred             CccEEEECCCCCC-CCCCCCCCH----HHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           89 KLDILVNAAAGNF-LVPAEDLSP----NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        89 ~id~li~~ag~~~-~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      ++|+||||||... ..++.+.+.    ++|++.+++|+.+++.++++++|+|.+++         |+||+++|..+..+.
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---------g~iv~~sS~~~~~~~  149 (262)
T TIGR03325        79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR---------GSVIFTISNAGFYPN  149 (262)
T ss_pred             CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC---------CCEEEEeccceecCC
Confidence            9999999999753 234444443    57999999999999999999999997642         779999999999888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---CChH-----HHHHHhhhhccCCCCCCHHH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---LAPE-----EIRSKATDYMAAYKFGEKWD  235 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~d  235 (259)
                      +....|+++|+|+++|+++++.|++ ++ ||||+|+||+++|++....   ..++     ...+...+..|.+|+++|+|
T Consensus       150 ~~~~~Y~~sKaa~~~l~~~la~e~~-~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~e  227 (262)
T TIGR03325       150 GGGPLYTAAKHAVVGLVKELAFELA-PY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEE  227 (262)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHhhc-cC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHH
Confidence            8888999999999999999999998 76 9999999999998764321   1111     11233345678999999999


Q ss_pred             HHHHHHHhcCc-cCCcccccccccC
Q 024976          236 IAMAALYLASD-AAVHRDLIHLLDD  259 (259)
Q Consensus       236 va~~~~~l~s~-~~~~~tG~~i~~D  259 (259)
                      ++++++||+|+ .+.++||+.|.+|
T Consensus       228 va~~~~~l~s~~~~~~~tG~~i~vd  252 (262)
T TIGR03325       228 YTGAYVFFATRGDTVPATGAVLNYD  252 (262)
T ss_pred             hhhheeeeecCCCcccccceEEEec
Confidence            99999999997 4689999999987

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-43  Score=291.83  Aligned_cols=234  Identities=29%  Similarity=0.339  Sum_probs=201.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++++....+         ..++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999998865432         2357889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCC---------CCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           88 GKLDILVNAAAGNFLV---------PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        88 g~id~li~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      +++|++|||||.....         ++.+.+.++|++.+++|+.+++.+++++.++|.+++.        |+||++||..
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~  147 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHD--------GVIVNMSSEA  147 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCC--------cEEEEEcccc
Confidence            9999999999975432         2346788999999999999999999999999987654        8999999999


Q ss_pred             ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-----------CChHHHHHHhhh--hc
Q 024976          159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----------LAPEEIRSKATD--YM  225 (259)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-----------~~~~~~~~~~~~--~~  225 (259)
                      +..+.+....|+++|+++++|+|+++.|++ ++|||||.|+||+++++.+...           ...++..+.+..  ..
T Consensus       148 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (266)
T PRK06171        148 GLEGSEGQSCYAATKAALNSFTRSWAKELG-KHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTI  226 (266)
T ss_pred             ccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccc
Confidence            999888999999999999999999999998 8999999999999974333211           012233333443  67


Q ss_pred             cCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          226 AAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       226 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |++|+++|+|||+++.||+|+.++++||+.|.+|
T Consensus       227 p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vd  260 (266)
T PRK06171        227 PLGRSGKLSEVADLVCYLLSDRASYITGVTTNIA  260 (266)
T ss_pred             cCCCCCCHHHhhhheeeeeccccccceeeEEEec
Confidence            8999999999999999999999999999999987

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=5.8e-43  Score=291.49  Aligned_cols=244  Identities=27%  Similarity=0.326  Sum_probs=206.6

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++. .+.++.++++|++|+++++++++.+.+
T Consensus        12 ~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         12 PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999998777776666663 245688999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCC--CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           86 HFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+|++|+||||||....  .++.+.+.++|++.+++|+.+++++++++++.|.++..        |+||+++|..+..+.
T Consensus        91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~ii~isS~~~~~~~  162 (280)
T PLN02253         91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKK--------GSIVSLCSVASAIGG  162 (280)
T ss_pred             HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--------ceEEEecChhhcccC
Confidence            99999999999997532  45778899999999999999999999999999987654        889999999998888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH----HHHHH----hhhhccC-CCCCCHH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE----EIRSK----ATDYMAA-YKFGEKW  234 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~----~~~~~----~~~~~~~-~~~~~~~  234 (259)
                      +....|+++|+++++++++++.|++ ..||+||+|+||.+.|++.....++.    .....    .....+. ++..+|+
T Consensus       163 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  241 (280)
T PLN02253        163 LGPHAYTGSKHAVLGLTRSVAAELG-KHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVD  241 (280)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHH
Confidence            7888999999999999999999998 88999999999999987543322221    11111    1112232 5568999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |++++++||+|+.+.|++|+.|.+|
T Consensus       242 dva~~~~~l~s~~~~~i~G~~i~vd  266 (280)
T PLN02253        242 DVANAVLFLASDEARYISGLNLMID  266 (280)
T ss_pred             HHHHHHHhhcCcccccccCcEEEEC
Confidence            9999999999999999999999887

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-43  Score=290.82  Aligned_cols=227  Identities=22%  Similarity=0.250  Sum_probs=193.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+.+++..++++..+.++.++.+|++|++++.++++++ +.++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            689999998 699999999996 8999999999988888877777766667889999999999999999988 5689999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------  163 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  163 (259)
                      +||||||...       ..++|++.+++|+.+++++++++.|.|.++          |++|++||..+..+.        
T Consensus        79 ~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~----------g~iv~isS~~~~~~~~~~~~~~~  141 (275)
T PRK06940         79 GLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG----------GAGVVIASQSGHRLPALTAEQER  141 (275)
T ss_pred             EEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC----------CCEEEEEecccccCcccchhhhc
Confidence            9999999642       236799999999999999999999999754          568999998776542        


Q ss_pred             ----------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHH
Q 024976          164 ----------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRS  219 (259)
Q Consensus       164 ----------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~  219 (259)
                                            +++..|++||+|+..++|+++.|++ ++|||||+|+||+++|++......  .++..+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~  220 (275)
T PRK06940        142 ALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWG-ERGARINSISPGIISTPLAQDELNGPRGDGYR  220 (275)
T ss_pred             cccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHc-cCCeEEEEeccCcCcCccchhhhcCCchHHHH
Confidence                                  2467899999999999999999998 899999999999999876533221  122233


Q ss_pred             HhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          220 KATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       220 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ......|.+|+++|||||++++||+|+.++++||+.|.+|
T Consensus       221 ~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vd  260 (275)
T PRK06940        221 NMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVD  260 (275)
T ss_pred             HHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEc
Confidence            4445678899999999999999999999999999999987

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-42  Score=285.27  Aligned_cols=238  Identities=26%  Similarity=0.360  Sum_probs=210.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +|+++||||++|||++++++|+++|++|+++++ +.+..+...+++...+.++.++.+|+++.++++++++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999988865 5566777777777777789999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |++|||+|.....++.+.+.++|++.+++|+.+++.+++++.++|.+++.       +|+||++||..+..+.++...|+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~  154 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYT  154 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEeeccccCCCCCcchhH
Confidence            99999999876677788899999999999999999999999999976532       38999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCc
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVH  250 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (259)
                      ++|+++++++++++.++. ++||++|+|+||.++|+....  .+.+.........|.+|+.+|+|+++++.||+++.+.+
T Consensus       155 ~sK~a~~~l~~~la~~~~-~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  231 (256)
T PRK12743        155 AAKHALGGLTKAMALELV-EHGILVNAVAPGAIATPMNGM--DDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASY  231 (256)
T ss_pred             HHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCccCccccc--cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccC
Confidence            999999999999999998 899999999999999765432  22333334455678889999999999999999999999


Q ss_pred             ccccccccC
Q 024976          251 RDLIHLLDD  259 (259)
Q Consensus       251 ~tG~~i~~D  259 (259)
                      ++|+.|.+|
T Consensus       232 ~~G~~~~~d  240 (256)
T PRK12743        232 TTGQSLIVD  240 (256)
T ss_pred             cCCcEEEEC
Confidence            999999887

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-42  Score=284.31  Aligned_cols=239  Identities=37%  Similarity=0.513  Sum_probs=209.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++.+|+++||||+++||++++++|+++|++|++++|+.+. ....+++.  +.++.++.+|++++++++++++++.+.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            56889999999999999999999999999999999998653 33333332  3457789999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.++|.+++.        ++||++||..+..+.+...
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~  159 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGG--------GKIVNLASQAGVVALERHV  159 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC--------ceEEEEcchhhccCCCCCc
Confidence            99999999999877777788899999999999999999999999999987654        8999999999988999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+++++++++++.|++ ++||+||.|+||+++|+.....+. .+.........|.+|+.+|+|+++++++|+++.
T Consensus       160 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  237 (255)
T PRK06841        160 AYCASKAGVVGMTKVLALEWG-PYGITVNAISPTVVLTELGKKAWA-GEKGERAKKLIPAGRFAYPEEIAAAALFLASDA  237 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCcCcCcccccccc-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999998 889999999999999776443322 222333455678889999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.++||+.|.+|
T Consensus       238 ~~~~~G~~i~~d  249 (255)
T PRK06841        238 AAMITGENLVID  249 (255)
T ss_pred             ccCccCCEEEEC
Confidence            999999999987

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-42  Score=283.01  Aligned_cols=239  Identities=28%  Similarity=0.374  Sum_probs=204.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++++|+++||||++|||+++++.|+++|++|+++.+ +.+..+....++   +.++.++.+|++++++++++++++.+.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH   77 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999988765 444444444333   356889999999999999999999998


Q ss_pred             cCC-ccEEEECCCCCC------CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           87 FGK-LDILVNAAAGNF------LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        87 ~g~-id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      +++ +|++|||||...      ..++.+.+.++|++.+++|+.+++.++++++++|.+++.        |+||+++|..+
T Consensus        78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~iss~~~  149 (253)
T PRK08642         78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGF--------GRIINIGTNLF  149 (253)
T ss_pred             hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCC--------eEEEEECCccc
Confidence            887 999999998631      245778899999999999999999999999999977654        89999999887


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      ..+..++..|+++|+++++|+|+++.+++ ++|||||+|+||+++|+..... .+++..+......|.+++.+|+|++++
T Consensus       150 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~  227 (253)
T PRK08642        150 QNPVVPYHDYTTAKAALLGLTRNLAAELG-PYGITVNMVSGGLLRTTDASAA-TPDEVFDLIAATTPLRKVTTPQEFADA  227 (253)
T ss_pred             cCCCCCccchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeecccCCchhhcc-CCHHHHHHHHhcCCcCCCCCHHHHHHH
Confidence            77777788999999999999999999998 8999999999999997654333 234444455667788999999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +.||+++.+.++||+.|.+|
T Consensus       228 ~~~l~~~~~~~~~G~~~~vd  247 (253)
T PRK08642        228 VLFFASPWARAVTGQNLVVD  247 (253)
T ss_pred             HHHHcCchhcCccCCEEEeC
Confidence            99999999999999999987

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-42  Score=281.62  Aligned_cols=250  Identities=28%  Similarity=0.368  Sum_probs=218.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||+++||++++++|+++|++|++++|+.++++.+.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            34789999999999999999999999999999999999988888888776666678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||+|.....++.+.+.++|+..+++|+.+++.+++++++.|.++..........+++|++||..+..+.+...
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  164 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG  164 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCcc
Confidence            99999999999877677778889999999999999999999999999987643222122248999999999988888889


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.++++++.++. ++||+|++|+||.++|+...... ..+....+.+..|.+|+++|+|+++.+.||+++.
T Consensus       165 ~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~  242 (258)
T PRK06949        165 LYCMSKAAVVHMTRAMALEWG-RHGINVNAICPGYIDTEINHHHW-ETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADE  242 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeCCCcCCcchhcc-ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence            999999999999999999998 88999999999999976543322 2233345566778889999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.+++|+.|.+|
T Consensus       243 ~~~~~G~~i~~d  254 (258)
T PRK06949        243 SQFINGAIISAD  254 (258)
T ss_pred             hcCCCCcEEEeC
Confidence            999999999987

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-42  Score=278.99  Aligned_cols=196  Identities=23%  Similarity=0.294  Sum_probs=185.4

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +..+.+|+++|||||++|+|+++|.+|+++|+++++.|.+.+..++..+++++.| +++.+.||+++.+++.+..+++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~  110 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKK  110 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999999999998776 899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      +.|.||+||||||+....++.+.+++++++.+++|+.+++..+|+|+|.|.++.+        |+||.++|.+|..+.++
T Consensus       111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~--------GHIV~IaS~aG~~g~~g  182 (300)
T KOG1201|consen  111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNN--------GHIVTIASVAGLFGPAG  182 (300)
T ss_pred             hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCC--------ceEEEehhhhcccCCcc
Confidence            9999999999999999999999999999999999999999999999999999876        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEecccccCCcccC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVS  210 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~--~~~gi~v~~i~pg~v~t~~~~~  210 (259)
                      ...||+||+|+.+|.++|+.|+.  ...||++..|+|+.++|.++..
T Consensus       183 l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  183 LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            99999999999999999999986  4567999999999999766653

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-42  Score=283.32  Aligned_cols=241  Identities=27%  Similarity=0.372  Sum_probs=213.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999998888888888876667789999999999999999999999999


Q ss_pred             CccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        89 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.++|.++.         ++||++||..+..+.+++.
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---------~~ii~~sS~~~~~~~~~~~  152 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG---------GSIVMINSMVLRHSQPKYG  152 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---------CEEEEEechhhccCCCCcc
Confidence            9999999999754 36777889999999999999999999999999997652         7899999999998988999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---------CChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      .|+++|++++.++++++.|++ ++||++|+|+||.+.|+.....         ...++....+.+..+.+++.+|+|+++
T Consensus       153 ~Y~~sK~a~~~l~~~~a~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (258)
T PRK07890        153 AYKMAKGALLAASQSLATELG-PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVAS  231 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHH
Confidence            999999999999999999998 8899999999999997753221         122344444555678888999999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+++...++||+.|.+|
T Consensus       232 a~~~l~~~~~~~~~G~~i~~~  252 (258)
T PRK07890        232 AVLFLASDLARAITGQTLDVN  252 (258)
T ss_pred             HHHHHcCHhhhCccCcEEEeC
Confidence            999999998889999999876

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.4e-42  Score=311.02  Aligned_cols=237  Identities=27%  Similarity=0.372  Sum_probs=209.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ...+|+++||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++..+.+|++|+++++++++++.+.+|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999999988777766554   34677899999999999999999999999


Q ss_pred             CccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        89 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+          +|+||++||..+..+.+++.
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~  412 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ----------GGVIVNLGSIASLLALPPRN  412 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc----------CCEEEEECchhhcCCCCCCc
Confidence            9999999999763 467788899999999999999999999999999932          28899999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-hHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      .|+++|+++++|+|+++.|++ ++|||||+|+||+++|++...... .++..+.+.+..|.+|+.+|+|+|++++||+++
T Consensus       413 ~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~  491 (520)
T PRK06484        413 AYCASKAAVTMLSRSLACEWA-PAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASP  491 (520)
T ss_pred             hhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999998 899999999999999876433221 122234455667889999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.++||+.|.+|
T Consensus       492 ~~~~~~G~~i~vd  504 (520)
T PRK06484        492 AASYVNGATLTVD  504 (520)
T ss_pred             cccCccCcEEEEC
Confidence            9999999999987

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-42  Score=288.05  Aligned_cols=240  Identities=21%  Similarity=0.210  Sum_probs=209.3

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +++.++++|+++||||++|||+++++.|+++|++|++++|+.++++...+++.. +.++..+.+|++|+++++++++++.
T Consensus         2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (296)
T PRK05872          2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAV   80 (296)
T ss_pred             CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            345668999999999999999999999999999999999999888887777643 4467778899999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.+|++|++|||||.....++.+.++++|++.+++|+.++++++++++|+|.++.         |+||++||..+..+.+
T Consensus        81 ~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~---------g~iv~isS~~~~~~~~  151 (296)
T PRK05872         81 ERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR---------GYVLQVSSLAAFAAAP  151 (296)
T ss_pred             HHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---------CEEEEEeCHhhcCCCC
Confidence            9999999999999988778888999999999999999999999999999997642         8899999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhh--ccCCCCCCHHHHHHHHHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~  242 (259)
                      ....|++||+++++|+++++.|++ .+||+||+|+||+++|++.............+...  .|.+++.+|+|+++++.+
T Consensus       152 ~~~~Y~asKaal~~~~~~l~~e~~-~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~  230 (296)
T PRK05872        152 GMAAYCASKAGVEAFANALRLEVA-HHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVD  230 (296)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHH-HHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHH
Confidence            999999999999999999999998 89999999999999987654332221222223332  356788999999999999


Q ss_pred             hcCccCCcccccc
Q 024976          243 LASDAAVHRDLIH  255 (259)
Q Consensus       243 l~s~~~~~~tG~~  255 (259)
                      ++++...+++|..
T Consensus       231 ~~~~~~~~i~~~~  243 (296)
T PRK05872        231 GIERRARRVYAPR  243 (296)
T ss_pred             HHhcCCCEEEchH
Confidence            9999999998864

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-41  Score=279.97  Aligned_cols=243  Identities=30%  Similarity=0.371  Sum_probs=214.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+...+.++.++.+|+++++++.++++++.+.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999888888877776666778999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||.....++.+.+.+++++.+++|+.+++.+.+++.++|.+...       .|+||++||..+..+.++..
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~  158 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-------GGSVINISSTMGRLAGRGFA  158 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-------CeEEEEEccccccCCCCCCc
Confidence            99999999999876677788899999999999999999999999999987422       38999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+++++++++++.|+. + +|++|+|+||++.|+........++....+....+..++.+++|++++++|++++.
T Consensus       159 ~Y~~sK~a~~~~~~~~~~e~~-~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        159 AYGTAKAALAHYTRLAALDLC-P-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPA  236 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHHC-C-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999997 5 69999999999987654322223344445555667788899999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ..+++|+.+.+|
T Consensus       237 ~~~~~g~~~~~~  248 (263)
T PRK07814        237 GSYLTGKTLEVD  248 (263)
T ss_pred             ccCcCCCEEEEC
Confidence            999999998876

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=279.90  Aligned_cols=240  Identities=21%  Similarity=0.261  Sum_probs=209.6

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC--CCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +|+++||||+++||++++++|+++|++|++++|+...++...+++....  .++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999887777777765432  46889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++.       .++||++||..+..+.+....|
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-------~~~iv~~ss~~~~~~~~~~~~Y  154 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI-------QGRIIQINSKSGKVGSKHNSGY  154 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC-------CcEEEEecCcccccCCCCCchh
Confidence            999999999877778888999999999999999999999999999987641       2789999998888888888899


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----------ChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----------APEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      ++||+|+++++++++.|++ ++||+||.|+||.+.++.+....          .+++..+.+.+..|.+|+.+++|++++
T Consensus       155 ~~sKaa~~~l~~~la~e~~-~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~  233 (259)
T PRK12384        155 SAAKFGGVGLTQSLALDLA-EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNM  233 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHH
Confidence            9999999999999999998 89999999999986434332222          123444455667889999999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+++.+.+++|+.+.+|
T Consensus       234 ~~~l~~~~~~~~~G~~~~v~  253 (259)
T PRK12384        234 LLFYASPKASYCTGQSINVT  253 (259)
T ss_pred             HHHHcCcccccccCceEEEc
Confidence            99999998999999999886

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.2e-41  Score=276.68  Aligned_cols=229  Identities=20%  Similarity=0.215  Sum_probs=195.0

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++||||++|||++++++|+++|++|++++|+.+...   +.+...+  +.++.+|++|+++++++++++.+.++++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            689999999999999999999999999999999865432   3333323  67899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ++|||||......+.+.++++|++.+++|+.+++.+++.++|.|.+++.      ..|+||++||..+..+.+.+..|++
T Consensus        77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~------~~g~iv~~ss~~~~~~~~~~~~Y~a  150 (236)
T PRK06483         77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH------AASDIIHITDYVVEKGSDKHIAYAA  150 (236)
T ss_pred             EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC------CCceEEEEcchhhccCCCCCccHHH
Confidence            9999999765555667789999999999999999999999999987541      0278999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHR  251 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (259)
                      ||+++++|+++++.|++ + +||||+|+||++.++..    .+++.........|.+|+.+|+|+++++.||++  +.++
T Consensus       151 sKaal~~l~~~~a~e~~-~-~irvn~v~Pg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~  222 (236)
T PRK06483        151 SKAALDNMTLSFAAKLA-P-EVKVNSIAPALILFNEG----DDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYV  222 (236)
T ss_pred             HHHHHHHHHHHHHHHHC-C-CcEEEEEccCceecCCC----CCHHHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCc
Confidence            99999999999999997 6 59999999999976432    122333334455688899999999999999997  6899


Q ss_pred             cccccccC
Q 024976          252 DLIHLLDD  259 (259)
Q Consensus       252 tG~~i~~D  259 (259)
                      ||+.|.+|
T Consensus       223 ~G~~i~vd  230 (236)
T PRK06483        223 TGRSLPVD  230 (236)
T ss_pred             CCcEEEeC
Confidence            99999987

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=2.3e-41  Score=278.17  Aligned_cols=237  Identities=25%  Similarity=0.307  Sum_probs=203.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+++||+++||||+++||+++++.|+++|++|++++|+.++.++..+++   +.++.++.+|++++++++++++++.+.+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4577999999999999999999999999999999999876665554443   4468899999999999999999999999


Q ss_pred             CCccEEEECCCCCCC--CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           88 GKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        88 g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      |++|++|||||....  .++.+.+.++|+..+++|+.+++.+++++.|+|.+..         |+||++||..+..+.+.
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---------g~ii~~sS~~~~~~~~~  153 (255)
T PRK05717         83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN---------GAIVNLASTRARQSEPD  153 (255)
T ss_pred             CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---------cEEEEEcchhhcCCCCC
Confidence            999999999997643  5677889999999999999999999999999997642         78999999999998888


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|+++|++++.++++++.+++ . +|+||+|+||+++|++..... ............|.+|+++|+|+++++.||++
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~-~-~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  230 (255)
T PRK05717        154 TEAYAASKGGLLALTHALAISLG-P-EIRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLS  230 (255)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhc-C-CCEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC
Confidence            99999999999999999999996 5 499999999999986533221 12222222345677899999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.+++|+.+.+|
T Consensus       231 ~~~~~~~g~~~~~~  244 (255)
T PRK05717        231 RQAGFVTGQEFVVD  244 (255)
T ss_pred             chhcCccCcEEEEC
Confidence            98999999999876

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.5e-41  Score=276.49  Aligned_cols=239  Identities=23%  Similarity=0.304  Sum_probs=209.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +++|+++||||++|||++++++|+++|++|++. +++....++..+++...+.++..+.+|++|.+++.++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999998875 4555556666666666677788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||+|.....++.+.++++|++.+++|+.+++.+++++++.|.+++.        ++||++||..+..+.++...
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~  152 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGW--------GRIINISSVNGQKGQFGQTN  152 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------eEEEEEechhccCCCCCChh
Confidence            9999999999876667888899999999999999999999999999987654        89999999998888888999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+++|++++.++++++.|+. ..||++|.|+||++.|+... ... ++..+......|..++.+++|+++.+.||+++.+
T Consensus       153 y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~~~t~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~  229 (246)
T PRK12938        153 YSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYIGTDMVK-AIR-PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEES  229 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEecccCCchhh-hcC-hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999998 89999999999999976543 222 2333444455677889999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .+++|+.|.+|
T Consensus       230 ~~~~g~~~~~~  240 (246)
T PRK12938        230 GFSTGADFSLN  240 (246)
T ss_pred             CCccCcEEEEC
Confidence            99999999887

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-41  Score=277.33  Aligned_cols=241  Identities=29%  Similarity=0.384  Sum_probs=212.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEE-EeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +.+|+++||||++|||++++++|+++|++|++ .+|+.+..++..++++..+.++.++.+|++|+++++++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999876 57887777788888877677889999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||+|.....++.+.+.++|+..+++|+.+++.++++++++|++++.        |+||++||..+..+.++...
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~~sS~~~~~~~~~~~~  153 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGG--------GKIISLSSLGSIRYLENYTT  153 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------eEEEEEcchhhccCCCCccH
Confidence            9999999999877778888999999999999999999999999999987654        89999999988888888899


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+++|++++.|+++++.++. +.||++|.|+||++.|+.........+.........|.+++.+++|+++.+.+++++..
T Consensus       154 y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  232 (250)
T PRK08063        154 VGVSKAALEALTRYLAVELA-PKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEA  232 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-HhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchh
Confidence            99999999999999999998 88999999999999876543322223344444555677788999999999999999988


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .+++|+.+.+|
T Consensus       233 ~~~~g~~~~~~  243 (250)
T PRK08063        233 DMIRGQTIIVD  243 (250)
T ss_pred             cCccCCEEEEC
Confidence            99999999887

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-41  Score=276.98  Aligned_cols=237  Identities=28%  Similarity=0.362  Sum_probs=206.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|+++.+++.++++.+.+.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999877666655544   45688999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.|+|.+.          +++|+++|..+..+.+....
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------~~~i~~~S~~~~~~~~~~~~  149 (249)
T PRK06500         80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP----------ASIVLNGSINAHIGMPNSSV  149 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC----------CEEEEEechHhccCCCCccH
Confidence            99999999998777777788999999999999999999999999998642          67999999888888888999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-CC---hHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LA---PEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      |+++|+++++++++++.|+. ++||+++.|+||+++|+..... ..   .+...+.+....|..++.+|+|+++++.||+
T Consensus       150 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  228 (249)
T PRK06500        150 YAASKAALLSLAKTLSGELL-PRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLA  228 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999998 8899999999999998753321 11   1223334455567888999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.|++|+.|.+|
T Consensus       229 ~~~~~~~~g~~i~~~  243 (249)
T PRK06500        229 SDESAFIVGSEIIVD  243 (249)
T ss_pred             CccccCccCCeEEEC
Confidence            998999999999987

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-41  Score=278.82  Aligned_cols=233  Identities=24%  Similarity=0.272  Sum_probs=200.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .++||+++||||++|||++++++|+++|++|++++|+.+..         ...++.++++|++|+++++++++++.+.++
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999986431         133588999999999999999999999999


Q ss_pred             CccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc-c
Q 024976           89 KLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-Y  165 (259)
Q Consensus        89 ~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~  165 (259)
                      ++|++|||||...  ..++.+.+.++|++.+++|+.+++.++++++|+|.+++.        |+||++||..+..+.+ .
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~ii~isS~~~~~~~~~~  148 (260)
T PRK06523         77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGS--------GVIIHVTSIQRRLPLPES  148 (260)
T ss_pred             CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEecccccCCCCCC
Confidence            9999999999642  456777899999999999999999999999999987654        8899999999888755 7


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---------ChHHHHHHh---hhhccCCCCCCH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKA---TDYMAAYKFGEK  233 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---------~~~~~~~~~---~~~~~~~~~~~~  233 (259)
                      ...|+++|+++++|+++++.|++ ++||++|+|+||+++|+......         ..++..+.+   ....|.+|+.+|
T Consensus       149 ~~~Y~~sK~a~~~l~~~~a~~~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  227 (260)
T PRK06523        149 TTAYAAAKAALSTYSKSLSKEVA-PKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEP  227 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCH
Confidence            88999999999999999999998 89999999999999987542210         112222111   234688899999


Q ss_pred             HHHHHHHHHhcCccCCcccccccccC
Q 024976          234 WDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+++++.||+|+.+.++||+.|.+|
T Consensus       228 ~~va~~~~~l~s~~~~~~~G~~~~vd  253 (260)
T PRK06523        228 EEVAELIAFLASDRAASITGTEYVID  253 (260)
T ss_pred             HHHHHHHHHHhCcccccccCceEEec
Confidence            99999999999999999999999887

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=274.28  Aligned_cols=221  Identities=17%  Similarity=0.214  Sum_probs=191.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+.++..+.+|++++++++++++++.+.+|
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999999888888877677788999999999999999999999999


Q ss_pred             -CccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           89 -KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        89 -~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                       ++|++|||+|.. ...++.+.++++|.+.+++|+.+++.+++.++|+|++++.       +|+||++||..+.   +++
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~---~~~  151 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK-------KGVIVNVISHDDH---QDL  151 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CceEEEEecCCCC---CCc
Confidence             999999999854 3457888999999999999999999999999999987532       3899999997544   457


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+++|+|+.+|+|+++.|++ ++|||||+|+||++.|+...   . ++..+.+.           +|++.+..||++ 
T Consensus       152 ~~Y~asKaal~~~~~~la~el~-~~~Irvn~v~PG~i~t~~~~---~-~~~~~~~~-----------~~~~~~~~~l~~-  214 (227)
T PRK08862        152 TGVESSNALVSGFTHSWAKELT-PFNIRVGGVVPSIFSANGEL---D-AVHWAEIQ-----------DELIRNTEYIVA-  214 (227)
T ss_pred             chhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcCcCCCcc---C-HHHHHHHH-----------HHHHhheeEEEe-
Confidence            7899999999999999999998 89999999999999976211   1 12111111           799999999997 


Q ss_pred             cCCcccccccc
Q 024976          247 AAVHRDLIHLL  257 (259)
Q Consensus       247 ~~~~~tG~~i~  257 (259)
                       +.|+||+.|.
T Consensus       215 -~~~~tg~~~~  224 (227)
T PRK08862        215 -NEYFSGRVVE  224 (227)
T ss_pred             -cccccceEEe
Confidence             7799998875

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-41  Score=275.02  Aligned_cols=248  Identities=34%  Similarity=0.469  Sum_probs=214.4

Q ss_pred             CCCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976            1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus         1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      |.+-....++++|+++||||+++||.+++++|+++|++|++++|+.++++...+++...+.++.++.+|++|++++++++
T Consensus         1 ~~~~~~~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~   80 (259)
T PRK08213          1 MMTVLELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLA   80 (259)
T ss_pred             CCcchhhhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            44544556789999999999999999999999999999999999988888877777766667889999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHH-HHhcCCCCCCCCCCceEEEeccccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY-LKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      +++.+.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.++ |.+++.        ++||++||..+
T Consensus        81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~--------~~~v~~sS~~~  152 (259)
T PRK08213         81 EETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGY--------GRIINVASVAG  152 (259)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCC--------eEEEEECChhh
Confidence            999999999999999999866667778899999999999999999999999998 665543        88999999877


Q ss_pred             cccCcc----chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHH
Q 024976          160 YTATWY----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD  235 (259)
Q Consensus       160 ~~~~~~----~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  235 (259)
                      ..+.+.    ...|+++|++++.++++++.+++ ++||+++.++||+++|+.... ..+ ...+.+....|..++++++|
T Consensus       153 ~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~-~~gi~v~~v~Pg~~~t~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~  229 (259)
T PRK08213        153 LGGNPPEVMDTIAYNTSKGAVINFTRALAAEWG-PHGIRVNAIAPGFFPTKMTRG-TLE-RLGEDLLAHTPLGRLGDDED  229 (259)
T ss_pred             ccCCCccccCcchHHHHHHHHHHHHHHHHHHhc-ccCEEEEEEecCcCCCcchhh-hhH-HHHHHHHhcCCCCCCcCHHH
Confidence            765543    48899999999999999999998 889999999999998764332 222 22334556677888999999


Q ss_pred             HHHHHHHhcCccCCcccccccccC
Q 024976          236 IAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       236 va~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.||+++.+.+++|+.|.+|
T Consensus       230 va~~~~~l~~~~~~~~~G~~~~~~  253 (259)
T PRK08213        230 LKGAALLLASDASKHITGQILAVD  253 (259)
T ss_pred             HHHHHHHHhCccccCccCCEEEEC
Confidence            999999999999999999999887

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-41  Score=279.49  Aligned_cols=241  Identities=33%  Similarity=0.394  Sum_probs=210.1

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ...+++|+++||||++|||++++++|+++|++|++++|+.+ ..+...+.+...+.++.++.+|+++.++++++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999998854 34555566655566788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           86 HFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        86 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.+.          ++||++||..++.+.+
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~----------g~iV~isS~~~~~~~~  190 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG----------SAIINTGSITGYEGNE  190 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC----------CeEEEEecccccCCCC
Confidence            9999999999999764 3567788999999999999999999999999998542          7799999999998888


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ....|+++|+|++.|+++++.++. ++||+|++|+||+++|+....... .+....+....+.+++.+++|++++++||+
T Consensus       191 ~~~~Y~~sK~a~~~l~~~la~~~~-~~gIrv~~i~pG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~ll  268 (290)
T PRK06701        191 TLIDYSATKGAIHAFTRSLAQSLV-QKGIRVNAVAPGPIWTPLIPSDFD-EEKVSQFGSNTPMQRPGQPEELAPAYVFLA  268 (290)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCCCCCcccccccC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHc
Confidence            889999999999999999999998 889999999999999875443332 233344555668889999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.+++|+.|.+|
T Consensus       269 ~~~~~~~~G~~i~id  283 (290)
T PRK06701        269 SPDSSYITGQMLHVN  283 (290)
T ss_pred             CcccCCccCcEEEeC
Confidence            999999999999887

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=6.4e-41  Score=275.26  Aligned_cols=239  Identities=26%  Similarity=0.316  Sum_probs=212.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||+++||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999988888888888776777899999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      ||||+|....+++.+.+.++|++.+++|+.+++.+++++++.|++++.       +++||++||..+..+.+.+..|+++
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~s  153 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH-------GGKIINAASIAGHEGNPILSAYSST  153 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-------CeEEEEecchhhcCCCCCCcchHHH
Confidence            999999877778888999999999999999999999999999987643       3789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC---------hHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       173 K~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      |++++.|+++++.|+. +.||+|+.|+||+++|+.......         ..+....+....+.+++.+|+|+++++.||
T Consensus       154 K~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  232 (254)
T TIGR02415       154 KFAVRGLTQTAAQELA-PKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFL  232 (254)
T ss_pred             HHHHHHHHHHHHHHhc-ccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhh
Confidence            9999999999999998 889999999999998765322111         011223344567788999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.+++|+.|.+|
T Consensus       233 ~~~~~~~~~g~~~~~d  248 (254)
T TIGR02415       233 ASEDSDYITGQSILVD  248 (254)
T ss_pred             cccccCCccCcEEEec
Confidence            9999999999999987

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-41  Score=273.07  Aligned_cols=240  Identities=28%  Similarity=0.343  Sum_probs=211.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++++|+++||||++|||++++++|+++|++|+++.|+. ...+...+++...+.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999998887654 3455666677666778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++++|++|||||.....++.+.+.++|++.+++|+.+++.+++++++.|.+.          ++||++||..+..+.+++
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----------~~iv~~ss~~~~~~~~~~  150 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG----------GRIINLSTSVIALPLPGY  150 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC----------cEEEEEeeccccCCCCCC
Confidence            9999999999998776777888999999999999999999999999998642          789999999998898999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+++|++++.++++++.|++ ..||+++.|+||++.|++...... ++....+.+..|.+++.+++|+++.++||+++
T Consensus       151 ~~Y~~sK~a~~~~~~~~a~~~~-~~~i~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~  228 (245)
T PRK12937        151 GPYAASKAAVEGLVHVLANELR-GRGITVNAVAPGPVATELFFNGKS-AEQIDQLAGLAPLERLGTPEEIAAAVAFLAGP  228 (245)
T ss_pred             chhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCccCchhcccCC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence            9999999999999999999998 889999999999999876433332 33445566777888999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.+++|+.|.+|
T Consensus       229 ~~~~~~g~~~~~~  241 (245)
T PRK12937        229 DGAWVNGQVLRVN  241 (245)
T ss_pred             cccCccccEEEeC
Confidence            9999999999887

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-41  Score=279.70  Aligned_cols=231  Identities=29%  Similarity=0.337  Sum_probs=200.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-------HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------LRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.       +++..+++...+.++.++.+|+++.+++.+++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999999999999997642       44555666666678999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +++.+.++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.++..        |+|+++||..+.
T Consensus        82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~--------g~iv~iss~~~~  153 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSEN--------PHILTLSPPLNL  153 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCC--------CEEEEECCchhc
Confidence            999999999999999999877778888999999999999999999999999999987653        889999998887


Q ss_pred             ccC--ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecc-cccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          161 TAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       161 ~~~--~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      .+.  +++..|++||++++.|+++++.|++ ++||+||+|+|| .++|+.... ..        ....+..++.+|++++
T Consensus       154 ~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~I~v~~i~Pg~~i~t~~~~~-~~--------~~~~~~~~~~~p~~va  223 (273)
T PRK08278        154 DPKWFAPHTAYTMAKYGMSLCTLGLAEEFR-DDGIAVNALWPRTTIATAAVRN-LL--------GGDEAMRRSRTPEIMA  223 (273)
T ss_pred             cccccCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeCCCccccHHHHh-cc--------cccccccccCCHHHHH
Confidence            776  7788999999999999999999998 899999999999 566543221 11        1122456788999999


Q ss_pred             HHHHHhcCccCCccccccc
Q 024976          238 MAALYLASDAAVHRDLIHL  256 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i  256 (259)
                      +.+++|+++...++||+.|
T Consensus       224 ~~~~~l~~~~~~~~~G~~~  242 (273)
T PRK08278        224 DAAYEILSRPAREFTGNFL  242 (273)
T ss_pred             HHHHHHhcCccccceeEEE
Confidence            9999999999999999977

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-40  Score=272.70  Aligned_cols=242  Identities=31%  Similarity=0.330  Sum_probs=215.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+++|+++||||+++||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            44679999999999999999999999999999999999888888888877666779999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||+|.....++.+.+.++|++.++.|+.+++.+++++.++|.+++.        |++|++||..+..+.+...
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~  154 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGR--------GRIVNLASDTALWGAPKLG  154 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------eEEEEECchhhccCCCCcc
Confidence            99999999999877777888899999999999999999999999999987654        8999999999998888889


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.+++.++.+++ ..+|+++.|+||+++|+.... .........+....|..++.+++|+++++++++++.
T Consensus       155 ~y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  232 (250)
T PRK12939        155 AYVASKGAVIGMTRSLARELG-GRGITVNAIAPGLTATEATAY-VPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDA  232 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHh-hhCEEEEEEEECCCCCccccc-cCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999998 889999999999999775433 222233444555667888999999999999999998


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ..+++|+.|.+|
T Consensus       233 ~~~~~G~~i~~~  244 (250)
T PRK12939        233 ARFVTGQLLPVN  244 (250)
T ss_pred             ccCccCcEEEEC
Confidence            999999999987

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=5.5e-41  Score=275.33  Aligned_cols=234  Identities=24%  Similarity=0.336  Sum_probs=205.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||+++||++++++|+++|++|++++|+.         +...+.++.++++|++++++++++++++.+.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            458899999999999999999999999999999999875         12234568899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||+|....+++.+.+.++|++.+++|+.+++.+++++.+.|++++.        |+||++||..+..+.++..
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~~ss~~~~~~~~~~~  146 (252)
T PRK08220         75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRS--------GAIVTVGSNAAHVPRIGMA  146 (252)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------CEEEEECCchhccCCCCCc
Confidence            99999999999877778888899999999999999999999999999987654        8999999999888888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHH--------HHHHhhhhccCCCCCCHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE--------IRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      .|+++|++++.|+++++.|++ +.||+||.|+||+++|+..........        ..+.+....|.+++.+|+|+|++
T Consensus       147 ~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  225 (252)
T PRK08220        147 AYGASKAALTSLAKCVGLELA-PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANA  225 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhh-HhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHH
Confidence            999999999999999999998 889999999999999875432211111        11233445678899999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+++.+.+++|++|.+|
T Consensus       226 ~~~l~~~~~~~~~g~~i~~~  245 (252)
T PRK08220        226 VLFLASDLASHITLQDIVVD  245 (252)
T ss_pred             HHHHhcchhcCccCcEEEEC
Confidence            99999999999999999987

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.2e-41  Score=274.78  Aligned_cols=237  Identities=23%  Similarity=0.272  Sum_probs=206.1

Q ss_pred             CCCCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCC-----------hhhHHHHHHHHHhcCCCeEEEEcCCCCHHH
Q 024976            9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRR-----------KTVLRSAVAALHSLGIPAIGLEGDVRKRED   75 (259)
Q Consensus         9 ~l~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~-----------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~   75 (259)
                      .+++|+++||||++  |||.+++++|+++|++|++++|+           ........+++...+.++.++.+|++++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            46889999999994  99999999999999999999987           222222445555556679999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 024976           76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS  155 (259)
Q Consensus        76 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is  155 (259)
                      +.++++++.+.++++|++|||||.....++.+.+++++++.+++|+.+++.+.+++++.|.++..        ++||++|
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~s  153 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAG--------GRIINLT  153 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC--------eEEEEEC
Confidence            99999999999999999999999877778888899999999999999999999999999976553        8999999


Q ss_pred             cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHH
Q 024976          156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD  235 (259)
Q Consensus       156 S~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  235 (259)
                      |..+..+.++...|+++|+++++++++++.|+. ..||+|++|+||+++|+...     +.....+....+..|+.+|+|
T Consensus       154 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~~~t~~~~-----~~~~~~~~~~~~~~~~~~~~~  227 (256)
T PRK12748        154 SGQSLGPMPDELAYAATKGAIEAFTKSLAPELA-EKGITVNAVNPGPTDTGWIT-----EELKHHLVPKFPQGRVGEPVD  227 (256)
T ss_pred             CccccCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCcccCCCCC-----hhHHHhhhccCCCCCCcCHHH
Confidence            999888888899999999999999999999998 88999999999999876432     223333445566778899999


Q ss_pred             HHHHHHHhcCccCCcccccccccC
Q 024976          236 IAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       236 va~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.||+++.+.+++|+.|.+|
T Consensus       228 ~a~~~~~l~~~~~~~~~g~~~~~d  251 (256)
T PRK12748        228 AARLIAFLVSEEAKWITGQVIHSE  251 (256)
T ss_pred             HHHHHHHHhCcccccccCCEEEec
Confidence            999999999999999999999887

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=5.4e-41  Score=273.33  Aligned_cols=233  Identities=25%  Similarity=0.254  Sum_probs=203.5

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++...+++...+.++.++.+|++|++++.++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999888765 455667777777667789999999999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHH-HHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK-YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      |||+|.....++.+.+.++|+..+++|+.+++++++++++ .+.+++.        |+||++||..+..+.+....|+++
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--------~~iv~vsS~~~~~~~~~~~~Y~~s  152 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQG--------GRIITLASVSGVMGNRGQVNYSAA  152 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCC--------eEEEEEcchhhccCCCCCcchHHH
Confidence            9999987777777889999999999999999999998864 4444443        889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCccc
Q 024976          173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRD  252 (259)
Q Consensus       173 K~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~t  252 (259)
                      |+++++++++++.|+. ++||++|.|+||+++|++..+ .. + ..+......|++|+.+|+|+++.++||+++.+.+++
T Consensus       153 K~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  228 (239)
T TIGR01831       153 KAGLIGATKALAVELA-KRKITVNCIAPGLIDTEMLAE-VE-H-DLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVT  228 (239)
T ss_pred             HHHHHHHHHHHHHHHh-HhCeEEEEEEEccCccccchh-hh-H-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcc
Confidence            9999999999999998 889999999999999776542 21 2 223344567889999999999999999999999999


Q ss_pred             ccccccC
Q 024976          253 LIHLLDD  259 (259)
Q Consensus       253 G~~i~~D  259 (259)
                      |+.|.+|
T Consensus       229 g~~~~~~  235 (239)
T TIGR01831       229 RQVISVN  235 (239)
T ss_pred             CCEEEec
Confidence            9999987

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-41  Score=275.68  Aligned_cols=240  Identities=30%  Similarity=0.330  Sum_probs=206.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.. +..+++...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            468899999999999999999999999999999999988766 6667776667789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||+|......+.+.+ ++|++.+++|+.+++.+.+.++|+|.+..         ++|+++||..+..+.+++.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---------~~iv~~ss~~~~~~~~~~~  151 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASR---------GAIVNISSKTALTGQGGTS  151 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccC---------cEEEEECCHHhccCCCCCc
Confidence            9999999999976555555544 89999999999999999999999887542         7899999999999888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---CC-hHHHHHHhhhhccCC-CCCCHHHHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---LA-PEEIRSKATDYMAAY-KFGEKWDIAMAALY  242 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---~~-~~~~~~~~~~~~~~~-~~~~~~dva~~~~~  242 (259)
                      .|++||+++++++++++.|+. ++||++|.|+||.++|+.....   .. +...........|.+ ++.+|+|++++++|
T Consensus       152 ~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  230 (258)
T PRK08628        152 GYAAAKGAQLALTREWAVALA-KDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVF  230 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHH
Confidence            999999999999999999998 8899999999999998754321   11 122222333444554 78999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      ++++.+.+++|+.|.+|
T Consensus       231 l~~~~~~~~~g~~~~~~  247 (258)
T PRK08628        231 LLSERSSHTTGQWLFVD  247 (258)
T ss_pred             HhChhhccccCceEEec
Confidence            99999999999999887

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.4e-40  Score=272.58  Aligned_cols=241  Identities=25%  Similarity=0.349  Sum_probs=215.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +++|+++||||+++||++++++|+++|++|++++|+.+..+++.+++...+.++.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988888877777766667999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|++|||+|.....++.+.+.++|+..+++|+.+++.+.+++++.|.+.+.        ++||++||..++.+.+....|
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~ii~iss~~~~~~~~~~~~Y  152 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGA--------GRIVNIASDAARVGSSGEAVY  152 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------eEEEEECchhhccCCCCCchH
Confidence            999999999876677888889999999999999999999999999987654        889999999999998999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC----CChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      +.+|++++.++++++.++. +.||+++.++||.++|+.....    ..+......+....|.+++.+++|+|+++.+|++
T Consensus       153 ~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  231 (250)
T TIGR03206       153 AACKGGLVAFSKTMAREHA-RHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSS  231 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHh-HhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcC
Confidence            9999999999999999997 7899999999999997754322    1233344555667788899999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +...+++|+.|.+|
T Consensus       232 ~~~~~~~g~~~~~~  245 (250)
T TIGR03206       232 DDASFITGQVLSVS  245 (250)
T ss_pred             cccCCCcCcEEEeC
Confidence            99999999999887

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=7.4e-41  Score=275.36  Aligned_cols=236  Identities=20%  Similarity=0.177  Sum_probs=198.6

Q ss_pred             EEEEeCCccchHHHHHHHHHH----cCCeEEEEeCChhhHHHHHHHHHh--cCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           14 VALLTGGGSGIGFEISLQLGK----HGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~----~G~~vv~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++||||++|||++++++|++    .|++|++++|+.+.+++..+++..  .+.++.++.+|++++++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    799999999999888888888865  24568899999999999999999998877


Q ss_pred             CCc----cEEEECCCCCCC-C-CCCC-CCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           88 GKL----DILVNAAAGNFL-V-PAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        88 g~i----d~li~~ag~~~~-~-~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      |.+    |+||||||.... . .+.+ .+.++|++.+++|+.+++.++++++|.|.++..      .+++||++||..+.
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~------~~~~iv~isS~~~~  155 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG------LNRTVVNISSLCAI  155 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC------CCCEEEEECCHHhC
Confidence            653    699999997533 2 2333 357899999999999999999999999986421      02789999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---ChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      .+.+.+..|++||+|+++|+++++.|++ +.||+||+|+||+++|++.....   ..++....+....|.+|+.+|+|+|
T Consensus       156 ~~~~~~~~Y~asKaal~~l~~~la~e~~-~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva  234 (256)
T TIGR01500       156 QPFKGWALYCAGKAARDMLFQVLALEEK-NPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSA  234 (256)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHH
Confidence            9999999999999999999999999998 89999999999999987543211   1223334455667889999999999


Q ss_pred             HHHHHhcCccCCcccccccc
Q 024976          238 MAALYLASDAAVHRDLIHLL  257 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~  257 (259)
                      +.+++|++ ..+++||++|-
T Consensus       235 ~~~~~l~~-~~~~~~G~~~~  253 (256)
T TIGR01500       235 QKLLSLLE-KDKFKSGAHVD  253 (256)
T ss_pred             HHHHHHHh-cCCcCCcceee
Confidence            99999997 57899999873

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-40  Score=279.37  Aligned_cols=242  Identities=24%  Similarity=0.327  Sum_probs=201.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++|+++||||++|||++++++|+++|++|++.+++ .+..+...+++...+.++.++.+|++|+++++++++++.+ 
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-   86 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-   86 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-
Confidence            56899999999999999999999999999999999875 3456677777776677899999999999999999999998 


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||......+.+.+.++|++.+++|+.+++++++++.++|.++.... .....|+||++||..+..+.++.
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~~~~~~  165 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAA-GGPVYGRIVNTSSEAGLVGPVGQ  165 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccc-CCCCCcEEEEECCcccccCCCCC
Confidence            99999999999988777788899999999999999999999999999997542110 00113799999999999888889


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh-HHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ..|+++|+++++|+++++.|++ ++||+||+|+||. .|++....... ++..  .    ......+|+|++..+.||++
T Consensus       166 ~~Y~asKaal~~l~~~la~e~~-~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~--~----~~~~~~~pe~va~~v~~L~s  237 (306)
T PRK07792        166 ANYGAAKAGITALTLSAARALG-RYGVRANAICPRA-RTAMTADVFGDAPDVE--A----GGIDPLSPEHVVPLVQFLAS  237 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHhh-hcCeEEEEECCCC-CCchhhhhccccchhh--h----hccCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999998 8999999999994 55542211111 1100  0    11223589999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.+.+|
T Consensus       238 ~~~~~~tG~~~~v~  251 (306)
T PRK07792        238 PAAAEVNGQVFIVY  251 (306)
T ss_pred             ccccCCCCCEEEEc
Confidence            99999999999876

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.9e-40  Score=269.71  Aligned_cols=228  Identities=25%  Similarity=0.313  Sum_probs=192.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+++|+++||||++|||++++++|+++|++|++++++ .+..+++.+++     .+.++.+|++|.+++.+++++    +
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~   73 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S   73 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h
Confidence            4779999999999999999999999999999888664 44444443332     256788999999998877653    5


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~  166 (259)
                      +++|++|||+|.....+..+.++++|++.+++|+.+++.+++.+++.|.+.          |+||++||..+. .+.++.
T Consensus        74 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------g~iv~isS~~~~~~~~~~~  143 (237)
T PRK12742         74 GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG----------GRIIIIGSVNGDRMPVAGM  143 (237)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC----------CeEEEEeccccccCCCCCC
Confidence            789999999998766677788899999999999999999999999998643          789999998874 577788


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+++|++++.++++++.+++ ++||+||+|+||+++|++.....   ...+......|++|+.+|+|+++++.||+|+
T Consensus       144 ~~Y~~sKaa~~~~~~~la~~~~-~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~  219 (237)
T PRK12742        144 AAYAASKSALQGMARGLARDFG-PRGITINVVQPGPIDTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGP  219 (237)
T ss_pred             cchHHhHHHHHHHHHHHHHHHh-hhCeEEEEEecCcccCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence            9999999999999999999998 89999999999999987543221   1223344556788999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.++||+.|.+|
T Consensus       220 ~~~~~~G~~~~~d  232 (237)
T PRK12742        220 EASFVTGAMHTID  232 (237)
T ss_pred             ccCcccCCEEEeC
Confidence            9999999999987

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-40  Score=281.11  Aligned_cols=225  Identities=22%  Similarity=0.290  Sum_probs=198.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999999999888888777789999999999999999999999989


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|++|||||....+++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||+++|..+..+.+.+.
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~--------g~iV~isS~~~~~~~p~~~  154 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGH--------GIFINMISLGGFAAQPYAA  154 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCC--------CEEEEEcChhhcCCCCCch
Confidence            99999999999887888899999999999999999999999999999998764        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCC-CeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDY-AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~-gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      .|++||+++.+|+++|+.|+. +. ||+|+.|+||.++|+.+.......  .   ....+...+.+|+++|+++++++..
T Consensus       155 ~Y~asKaal~~~~~sL~~El~-~~~gI~V~~v~Pg~v~T~~~~~~~~~~--~---~~~~~~~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        155 AYSASKFGLRGFSEALRGELA-DHPDIHVCDVYPAFMDTPGFRHGANYT--G---RRLTPPPPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             hHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEecCCccCcccccccccc--c---ccccCCCCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999997 64 999999999999987653221100  0   0111223467999999999998854

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-40  Score=273.54  Aligned_cols=240  Identities=23%  Similarity=0.343  Sum_probs=194.8

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC----hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~----~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      ++.+++|+++||||++|||++++++|+++|++|++++++    .+..+...+++...+.++.++.+|+++++++++++++
T Consensus         3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence            445789999999999999999999999999997776543    2344555566655566788999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe-ccccccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYT  161 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i-sS~~~~~  161 (259)
                      +.+.++++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.++          |+++++ ||..+ .
T Consensus        83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~----------~~iv~~~ss~~~-~  151 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN----------GKIVTLVTSLLG-A  151 (257)
T ss_pred             HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC----------CCEEEEecchhc-c
Confidence            99999999999999998777778888999999999999999999999999998653          567776 44433 3


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHH--HHhhhhccCC--CCCCHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR--SKATDYMAAY--KFGEKWDIA  237 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~dva  237 (259)
                      +.+.+..|++||+|+++|+++++.|+. ++||+||.|+||++.|+.......++...  .......+..  |+.+|+|++
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (257)
T PRK12744        152 FTPFYSAYAGSKAPVEHFTRAASKEFG-ARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIV  230 (257)
T ss_pred             cCCCcccchhhHHHHHHHHHHHHHHhC-cCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHH
Confidence            456788999999999999999999998 88999999999999987543322221100  1111122333  788999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++.||+++ ..+++|+.+.+|
T Consensus       231 ~~~~~l~~~-~~~~~g~~~~~~  251 (257)
T PRK12744        231 PFIRFLVTD-GWWITGQTILIN  251 (257)
T ss_pred             HHHHHhhcc-cceeecceEeec
Confidence            999999996 689999999887

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.9e-40  Score=269.37  Aligned_cols=242  Identities=30%  Similarity=0.392  Sum_probs=212.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++++++||||+++||++++++|+++|++|++++|+.+..+...+.+.. +.++.++.+|++|+++++++++++.+.+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            347899999999999999999999999999999999998877777776654 5568899999999999999999999999


Q ss_pred             CCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +++|+||||+|... ..++.+.+.++|++.+++|+.+++.+++.++++|.+++.        ++||++||..+..+.++.
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~  151 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGG--------GAIVNVASTAGLRPRPGL  151 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcChhhcCCCCCc
Confidence            99999999999753 456778899999999999999999999999999987654        889999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ..|+.+|++++.+++.++.+++ +.||++++|+||++.|+.......  .++....+....|.+++.+|+|+++++++|+
T Consensus       152 ~~y~~sk~~~~~~~~~~a~~~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  230 (251)
T PRK07231        152 GWYNASKGAVITLTKALAAELG-PDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLA  230 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999998 889999999999998765433221  1233444556677888999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++...+++|+.|.+|
T Consensus       231 ~~~~~~~~g~~~~~~  245 (251)
T PRK07231        231 SDEASWITGVTLVVD  245 (251)
T ss_pred             CccccCCCCCeEEEC
Confidence            998899999999887

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=6.9e-40  Score=267.58  Aligned_cols=238  Identities=26%  Similarity=0.297  Sum_probs=207.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||+++||++++++|+++|+.|++.+|+.++++...+.+   +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL   78 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999887776655443   3468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.+.+.+++.        ++||++||..+..+.+...
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~  150 (245)
T PRK12936         79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRY--------GRIINITSVVGVTGNPGQA  150 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCC--------CEEEEECCHHhCcCCCCCc
Confidence            99999999999877777778889999999999999999999999998876553        8899999999988888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+++.++++.++.++. ..||+++.|+||+++|+.... . .++..+......|..|+.+|+|+++++.||+++.
T Consensus       151 ~Y~~sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~  227 (245)
T PRK12936        151 NYCASKAGMIGFSKSLAQEIA-TRNVTVNCVAPGFIESAMTGK-L-NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSE  227 (245)
T ss_pred             chHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECcCcCchhcc-c-ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999998 889999999999998654322 2 2222333445667888999999999999999998


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ..+++|+.|.+|
T Consensus       228 ~~~~~G~~~~~~  239 (245)
T PRK12936        228 AAYVTGQTIHVN  239 (245)
T ss_pred             ccCcCCCEEEEC
Confidence            899999999886

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-39  Score=267.41  Aligned_cols=242  Identities=29%  Similarity=0.414  Sum_probs=211.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      |++++|+++||||+++||++++++|+++|++|++++|+.+..+...+++. .+.++.++++|++|+++++++++++.+.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999887777776665 45668999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||+|.....++.+.+.+++++.+++|+.+++.+++++++.|++++.        ++|+++||..+..+.+...
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~ii~~sS~~~~~~~~~~~  151 (252)
T PRK06138         80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGG--------GSIVNTASQLALAGGRGRA  151 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC--------eEEEEECChhhccCCCCcc
Confidence            99999999999877777788899999999999999999999999999987654        8899999999988888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----ChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      .|+.+|++++.++++++.|++ ..||++++++||.+.|+.....+    .++..........+..++.+++|+++.++++
T Consensus       152 ~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  230 (252)
T PRK06138        152 AYVASKGAIASLTRAMALDHA-TDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFL  230 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999998 88999999999999877543221    1222222333344566788999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++...+++|+.+.+|
T Consensus       231 ~~~~~~~~~g~~~~~~  246 (252)
T PRK06138        231 ASDESSFATGTTLVVD  246 (252)
T ss_pred             cCchhcCccCCEEEEC
Confidence            9999999999999876

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.4e-40  Score=268.09  Aligned_cols=236  Identities=28%  Similarity=0.355  Sum_probs=206.0

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcC--CCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ++||||++|||++++++|+++|++|++++|+ .+.++...+++....  ..+.++.+|++|+++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 666777777665432  2356788999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ++|||+|....+++.+.+.+++++.+++|+.+++.+++.+++.|.+++.        ++||++||..++.+.+++..|++
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~ii~~ss~~~~~~~~~~~~Y~~  153 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQP--------ASIVNISSVAAFKAEPDYTAYNA  153 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--------cEEEEecChhhccCCCCCchhHH
Confidence            9999999887778888899999999999999999999999999987654        88999999999999899999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCC--CeEEEEEecccccCCcccCC---CChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          172 AKAAVDSITRSLALEWGTDY--AIRVNGIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~--gi~v~~i~pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      +|++++.|+|+++.|++ ++  +|+|+.|+||+++|+.....   ..+++....+.+..|.+++.+|+|+++++++|+++
T Consensus       154 sK~a~~~~~~~la~e~~-~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  232 (251)
T PRK07069        154 SKAAVASLTKSIALDCA-RRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASD  232 (251)
T ss_pred             HHHHHHHHHHHHHHHhc-ccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999997 54  49999999999998765321   12233444455667888899999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.+++|+.|.+|
T Consensus       233 ~~~~~~g~~i~~~  245 (251)
T PRK07069        233 ESRFVTGAELVID  245 (251)
T ss_pred             cccCccCCEEEEC
Confidence            9999999999987

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.1e-39  Score=268.23  Aligned_cols=236  Identities=25%  Similarity=0.306  Sum_probs=199.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...  +..+.++.+|++|++++.++++++.+.
T Consensus         1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999988888877777432  234667899999999999999999999


Q ss_pred             cCCccEEEECCCCCC---CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           87 FGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        87 ~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      ++++|++|||||...   ..++.+.++++|...+++|+.+++.++++++|+|++++.        ++||++||..+..+.
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~  152 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGG--------GNLVNISSIYGVVAP  152 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC--------ceEEEEechhhhccc
Confidence            999999999998542   346778899999999999999999999999999987764        799999998765431


Q ss_pred             ----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCH
Q 024976          164 ----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       164 ----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (259)
                                .....|+++|+++++|+++++.|+. ++||+||.|+||.+.++.      +...........+..++.+|
T Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~i~v~~i~Pg~~~~~~------~~~~~~~~~~~~~~~~~~~~  225 (256)
T PRK09186        153 KFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFK-DSNIRVNCVSPGGILDNQ------PEAFLNAYKKCCNGKGMLDP  225 (256)
T ss_pred             cchhccccccCCcchhHHHHHHHHHHHHHHHHHhC-cCCeEEEEEecccccCCC------CHHHHHHHHhcCCccCCCCH
Confidence                      1123699999999999999999998 899999999999987542      12223333344566778999


Q ss_pred             HHHHHHHHHhcCccCCcccccccccC
Q 024976          234 WDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+|++++|++++.+.+++|+.|.+|
T Consensus       226 ~dva~~~~~l~~~~~~~~~g~~~~~~  251 (256)
T PRK09186        226 DDICGTLVFLLSDQSKYITGQNIIVD  251 (256)
T ss_pred             HHhhhhHhheeccccccccCceEEec
Confidence            99999999999999999999999887

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.8e-40  Score=267.11  Aligned_cols=227  Identities=24%  Similarity=0.288  Sum_probs=196.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+....         ...++.++.+|++++      ++++.+.++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~~   66 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWVP   66 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhhC
Confidence            47899999999999999999999999999999999875421         123588999999987      444555668


Q ss_pred             CccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        89 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ++|++|||+|... ..++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+..+.++..
T Consensus        67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~  138 (235)
T PRK06550         67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKS--------GIIINMCSIASFVAGGGGA  138 (235)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcChhhccCCCCCc
Confidence            9999999999753 356778899999999999999999999999999987654        8899999999998888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+++++++++++.|+. ++||++|.|+||+++|+.....+.++..........|.+|+.+|+|+|++++||+|+.
T Consensus       139 ~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        139 AYTASKHALAGFTKQLALDYA-KDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             ccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChh
Confidence            999999999999999999998 8899999999999998765444444444444556678899999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.+++|+.|.+|
T Consensus       218 ~~~~~g~~~~~~  229 (235)
T PRK06550        218 ADYMQGTIVPID  229 (235)
T ss_pred             hccCCCcEEEEC
Confidence            999999999887

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.3e-40  Score=295.32  Aligned_cols=239  Identities=28%  Similarity=0.371  Sum_probs=207.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .++|+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++++++++++++++.+.+|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999988777666655   456788999999999999999999999999


Q ss_pred             ccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           90 LDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        90 id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +|+||||||+..  ..++.+.+.++|++.+++|+.+++.++++++|+|++++.       +++||++||..+..+.+...
T Consensus        80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------g~~iv~isS~~~~~~~~~~~  152 (520)
T PRK06484         80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH-------GAAIVNVASGAGLVALPKRT  152 (520)
T ss_pred             CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CCeEEEECCcccCCCCCCCc
Confidence            999999999742  356778899999999999999999999999999987643       24999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH-HHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      .|+++|+++.+|+++++.|+. ++||+|+.|+||+++|++........ ..........|.+++.+|+|+++.+.||+++
T Consensus       153 ~Y~asKaal~~l~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWA-AKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999998 89999999999999977643321111 1122334456778889999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      ...+++|+.+.+|
T Consensus       232 ~~~~~~G~~~~~~  244 (520)
T PRK06484        232 QASYITGSTLVVD  244 (520)
T ss_pred             cccCccCceEEec
Confidence            9999999998876

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-39  Score=268.12  Aligned_cols=242  Identities=26%  Similarity=0.337  Sum_probs=210.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||+++||+++++.|+++|++|++++|+++..++..+.+...+.++.++++|+++.++++++++++.+.++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47799999999999999999999999999999999999888888888877677788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHH-HhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL-KKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ++|+||||+|.....++.+.+.++++..+++|+.+++.+++.+++.+ ++.+.        ++||++||..+..+.+...
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~--------~~iv~~ss~~~~~~~~~~~  155 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRG--------GVVIYMGSVHSHEASPLKS  155 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCC--------cEEEEEcchhhcCCCCCCc
Confidence            99999999998777777788899999999999999999999999999 55433        8999999998888888888


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh---------HHHH-HHhhhhccCCCCCCHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---------EEIR-SKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~dva  237 (259)
                      .|+++|+++++++|.++.++. +.||+++.|+||.++|+.....+..         ++.. ..+....+.+++.+++|++
T Consensus       156 ~y~~sk~a~~~~~~~la~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  234 (262)
T PRK13394        156 AYVTAKHGLLGLARVLAKEGA-KHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVA  234 (262)
T ss_pred             ccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            999999999999999999997 8899999999999997754332211         1111 2223345567899999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++++++....+++|+.+.+|
T Consensus       235 ~a~~~l~~~~~~~~~g~~~~~~  256 (262)
T PRK13394        235 QTVLFLSSFPSAALTGQSFVVS  256 (262)
T ss_pred             HHHHHHcCccccCCcCCEEeeC
Confidence            9999999988889999999887

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-39  Score=267.38  Aligned_cols=244  Identities=30%  Similarity=0.361  Sum_probs=211.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..+++|+++||||+++||+.++++|+++|++ |++++|+.++.+...+++...+.++.++.+|+++++++.++++.+.+.
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999 999999987777777777666777889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++++|++|||+|.....++.+.+.++|+..+++|+.+++.+++++++.|.++..       .|++|++||..++.+.+..
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~~~  154 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA-------EGTIVNIGSMSAHGGQPFL  154 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CCEEEEECCcccccCCCCc
Confidence            999999999999877777788899999999999999999999999999976532       3789999999998888888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC---CC--ChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---KL--APEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      ..|+++|+++++|+++++.|+. ..||++++|+||++.|+....   .+  .............|.+++.+++|+++++.
T Consensus       155 ~~Y~~sK~a~~~~~~~~a~e~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  233 (260)
T PRK06198        155 AAYCASKGALATLTRNAAYALL-RNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVA  233 (260)
T ss_pred             chhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHH
Confidence            9999999999999999999998 889999999999999775321   10  11122223334556788999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+++.+++++|+.|.+|
T Consensus       234 ~l~~~~~~~~~G~~~~~~  251 (260)
T PRK06198        234 FLLSDESGLMTGSVIDFD  251 (260)
T ss_pred             HHcChhhCCccCceEeEC
Confidence            999999999999999876

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.3e-39  Score=269.51  Aligned_cols=240  Identities=20%  Similarity=0.241  Sum_probs=193.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHH----HHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHS-LGIPAIGLEGDVRKREDA----VRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~----~~~~~~~~~~   86 (259)
                      ++++||||++|||++++++|+++|++|++++|+ .+.++...+++.. .+.++.++.+|++|++++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999987654 5667777777653 244677899999999865    5666666677


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCH-----------HHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSP-----------NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS  155 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is  155 (259)
                      +|++|+||||||.....++.+.+.           ++|.+.+++|+.+++.++++++++|++....  .....++|++++
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~~~~~~~iv~~~  159 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAE--QRSTNLSIVNLC  159 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccc--cCCCCeEEEEeh
Confidence            899999999999765555544333           3589999999999999999999998653210  011237899999


Q ss_pred             cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCC-CCCCHH
Q 024976          156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKW  234 (259)
Q Consensus       156 S~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  234 (259)
                      |..+..+.+++..|++||+|+++|+++++.|++ ++||+||.|+||++.++..   +. .+..+......|.+ ++.+|+
T Consensus       160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~  234 (267)
T TIGR02685       160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELA-PLQIRVNGVAPGLSLLPDA---MP-FEVQEDYRRKVPLGQREASAE  234 (267)
T ss_pred             hhhccCCCcccchhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEecCCccCccc---cc-hhHHHHHHHhCCCCcCCCCHH
Confidence            999988888999999999999999999999998 8999999999999976532   11 22223333445654 788999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.++||+++.+.+++|+.+.+|
T Consensus       235 ~va~~~~~l~~~~~~~~~G~~~~v~  259 (267)
T TIGR02685       235 QIADVVIFLVSPKAKYITGTCIKVD  259 (267)
T ss_pred             HHHHHHHHHhCcccCCcccceEEEC
Confidence            9999999999999999999999887

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3e-39  Score=264.32  Aligned_cols=239  Identities=34%  Similarity=0.469  Sum_probs=207.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+++|+++||||++|||++++++|+++|++|+++.+ +.+..++..+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            367899999999999999999999999999887654 4555666667776666679999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||||......+.+.+++++++.+++|+.+++.++++++|.|.++..        ++||++||..+..+.+++.
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~  154 (247)
T PRK12935         83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEE--------GRIISISSIIGQAGGFGQT  154 (247)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEcchhhcCCCCCCc
Confidence            99999999999877777778899999999999999999999999999987654        7899999999988888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+++++++++++.|+. +.||+++.++||+++|+... .. ++..........+.+++.+|||+++++++++++ 
T Consensus       155 ~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~-  230 (247)
T PRK12935        155 NYSAAKAGMLGFTKSLALELA-KTNVTVNAICPGFIDTEMVA-EV-PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-  230 (247)
T ss_pred             chHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEeCCCcChhhh-hc-cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-
Confidence            999999999999999999998 88999999999999876543 22 233334445566777899999999999999976 


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ..+++|+.+.+|
T Consensus       231 ~~~~~g~~~~i~  242 (247)
T PRK12935        231 GAYITGQQLNIN  242 (247)
T ss_pred             ccCccCCEEEeC
Confidence            468999999876

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=270.36  Aligned_cols=232  Identities=22%  Similarity=0.254  Sum_probs=196.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999888888888887666778999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||....+++.+.+.++|++.+++|+.+++.++++++|.|.+++.       +|+||++||..++.+.++..
T Consensus        82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~-------~g~iv~isS~~~~~~~~~~~  154 (275)
T PRK05876         82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT-------GGHVVFTASFAGLVPNAGLG  154 (275)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CCEEEEeCChhhccCCCCCc
Confidence            99999999999877788889999999999999999999999999999987642       38999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHH----HHhhhhcc-CCCCCCHHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIR----SKATDYMA-AYKFGEKWDIAMAA  240 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~----~~~~~~~~-~~~~~~~~dva~~~  240 (259)
                      .|+++|+++.+|+++++.|++ .+||+|+.|+||.++|+.......  .....    .......+ ...+.+|+|+|+.+
T Consensus       155 ~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (275)
T PRK05876        155 AYGVAKYGVVGLAETLAREVT-ADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLT  233 (275)
T ss_pred             hHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHH
Confidence            999999999999999999998 889999999999999775432110  00000    00001111 23467899999999


Q ss_pred             HHhcCcc
Q 024976          241 LYLASDA  247 (259)
Q Consensus       241 ~~l~s~~  247 (259)
                      +..+...
T Consensus       234 ~~ai~~~  240 (275)
T PRK05876        234 ADAILAN  240 (275)
T ss_pred             HHHHHcC
Confidence            8776443

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=277.28  Aligned_cols=236  Identities=23%  Similarity=0.292  Sum_probs=203.7

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            45578999999999999999999999999999999999999888888888877778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|++|||+|.....++.+.+.++|++.+++|+.++++++++++++|.+++.        |+||++||..++.+.+..
T Consensus        83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~--------g~iV~isS~~~~~~~~~~  154 (334)
T PRK07109         83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDR--------GAIIQVGSALAYRSIPLQ  154 (334)
T ss_pred             CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEeCChhhccCCCcc
Confidence            999999999999877788889999999999999999999999999999988754        899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCCChHHHHHHh-hhhccCCCCCCHHHHHHHHHHhc
Q 024976          167 IHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ..|+++|+++++|+++++.|+. ...+|+++.|+||.++|+.+.. .     .... ....+..++.+|+|+|+++++++
T Consensus       155 ~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~-~-----~~~~~~~~~~~~~~~~pe~vA~~i~~~~  228 (334)
T PRK07109        155 SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW-A-----RSRLPVEPQPVPPIYQPEVVADAILYAA  228 (334)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh-h-----hhhccccccCCCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999986 1257999999999999764321 1     1111 11224456789999999999999


Q ss_pred             Ccc--CCccccccc
Q 024976          245 SDA--AVHRDLIHL  256 (259)
Q Consensus       245 s~~--~~~~tG~~i  256 (259)
                      +..  ..++.+...
T Consensus       229 ~~~~~~~~vg~~~~  242 (334)
T PRK07109        229 EHPRRELWVGGPAK  242 (334)
T ss_pred             hCCCcEEEeCcHHH
Confidence            864  334555443

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-39  Score=267.56  Aligned_cols=242  Identities=27%  Similarity=0.368  Sum_probs=210.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++++|+++||||+++||+++++.|+++|++|++++|+.+..+...+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988777777766543  246889999999999999999999999


Q ss_pred             cCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      ++++|++|||+|... ..++.+.+.++|...+++|+.+++.+++++.+.|.+++.        ++|+++||..+..+.+.
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~~sS~~~~~~~~~  155 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGG--------GSFVGISSIAASNTHRW  155 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEechhhcCCCCC
Confidence            999999999999753 356777889999999999999999999999999987654        88999999999888888


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|+++|++++.++++++.++. ..||+++.|+||.++|+........+..........|..++++++|+++++.||++
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  234 (276)
T PRK05875        156 FGAYGVTKSAVDHLMKLAADELG-PSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLS  234 (276)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcC
Confidence            89999999999999999999998 88999999999999977654333333333334455677889999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +...+++|+.+.+|
T Consensus       235 ~~~~~~~g~~~~~~  248 (276)
T PRK05875        235 DAASWITGQVINVD  248 (276)
T ss_pred             chhcCcCCCEEEEC
Confidence            98899999988876

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-39  Score=263.67  Aligned_cols=241  Identities=27%  Similarity=0.363  Sum_probs=203.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEe-CChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|+++||||++|||++++++|+++|++|+++. |+.+.++...+++...+.++.++.||+++.++++++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            37999999999999999999999999988764 56666777777776666789999999999999999999999989999


Q ss_pred             cEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-chh
Q 024976           91 DILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIH  168 (259)
Q Consensus        91 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~  168 (259)
                      |++|||||.... .++.+.+.++|+..+++|+.+++.+++.+++.|..++.+     .+++||++||..+..+.+. +..
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~~~ii~~sS~~~~~~~~~~~~~  156 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGG-----RGGAIVNVSSIASRLGSPNEYVD  156 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC-----CCcEEEEECchhhcCCCCCCCcc
Confidence            999999997644 457788899999999999999999999999998754311     1378999999988777654 568


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||+++++|+++++.++. +.||+|+.|+||+++|++....-.+ +.........|.+|..++||+++.++||+++.+
T Consensus       157 Y~~sK~~~~~~~~~la~~~~-~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~  234 (248)
T PRK06947        157 YAGSKGAVDTLTLGLAKELG-PHGVRVNAVRPGLIETEIHASGGQP-GRAARLGAQTPLGRAGEADEVAETIVWLLSDAA  234 (248)
T ss_pred             cHhhHHHHHHHHHHHHHHhh-hhCcEEEEEeccCcccccccccCCH-HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999998 8899999999999998754322112 222333455677888999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .+++|+.|.+|
T Consensus       235 ~~~~G~~~~~~  245 (248)
T PRK06947        235 SYVTGALLDVG  245 (248)
T ss_pred             cCcCCceEeeC
Confidence            99999999887

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-39  Score=266.01  Aligned_cols=236  Identities=26%  Similarity=0.406  Sum_probs=201.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .++||+++||||++|||.+++++|+++|++|++++|+...++...+++.     ..++++|++++++++++++++.+.++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETYG   78 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999998776666555542     25789999999999999999999889


Q ss_pred             CccEEEECCCCCCC--CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-cc
Q 024976           89 KLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WY  165 (259)
Q Consensus        89 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~  165 (259)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|+|++++.        |+||++||..+..+. ++
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--------g~iv~~sS~~~~~g~~~~  150 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGK--------GSIINTASFVAVMGSATS  150 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCC--------cEEEEEcchhhccCCCCC
Confidence            99999999997542  45667888999999999999999999999999987654        889999998776665 36


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ...|+++|+++.++++.++.++. +.||+|+.|+||+++|+.......  ++.. .......|.+++.+|+|+++++.||
T Consensus       151 ~~~Y~~sKaal~~~~~~l~~~~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~l  228 (255)
T PRK06057        151 QISYTASKGGVLAMSRELGVQFA-RQGIRVNALCPGPVNTPLLQELFAKDPERA-ARRLVHVPMGRFAEPEEIAAAVAFL  228 (255)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHH-hhCcEEEEEeeCCcCCchhhhhccCCHHHH-HHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            77899999999999999999998 889999999999999876433222  2222 2223346778899999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.+++|+.|.+|
T Consensus       229 ~~~~~~~~~g~~~~~~  244 (255)
T PRK06057        229 ASDDASFITASTFLVD  244 (255)
T ss_pred             hCccccCccCcEEEEC
Confidence            9999999999999887

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-39  Score=262.42  Aligned_cols=241  Identities=27%  Similarity=0.329  Sum_probs=204.0

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +|+++||||+++||++++++|+++|++|+++++ +.+..+...+.+...+.++.++.+|++|.+++.++++++.+.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999888864 4455566666666656678899999999999999999999999999


Q ss_pred             cEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-chh
Q 024976           91 DILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIH  168 (259)
Q Consensus        91 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~  168 (259)
                      |++|||+|.... .++.+.++++|++.+++|+.+++.+++++++.|.++..+     .+|+||++||..+..+.+. +..
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~~~~~~~~~  156 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGG-----RGGAIVNVSSMAARLGSPGEYID  156 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----CCeEEEEECchhhcCCCCCCccc
Confidence            999999998643 466788999999999999999999999999999764210     0278999999988877765 367


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+++|+++++|+++++.|+. +.||+++.|+||.+.|++...... +..........|.+++.+++|+++++.|++++..
T Consensus       157 Y~~sKaa~~~~~~~la~~~~-~~~i~v~~i~pg~v~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~  234 (248)
T PRK06123        157 YAASKGAIDTMTIGLAKEVA-AEGIRVNAVRPGVIYTEIHASGGE-PGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEA  234 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccCchhhccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999998 889999999999999875433222 2333445566788899999999999999999988


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .+++|+.+.+|
T Consensus       235 ~~~~g~~~~~~  245 (248)
T PRK06123        235 SYTTGTFIDVS  245 (248)
T ss_pred             cCccCCEEeec
Confidence            99999998876

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-39  Score=262.62  Aligned_cols=232  Identities=21%  Similarity=0.268  Sum_probs=200.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCC--HHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRK--REDAVRVVESTI   84 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~--~~~~~~~~~~~~   84 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++++...+++... +..+.++.+|+++  .+++.++++++.
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            3478899999999999999999999999999999999998888887777544 3457788999986  678999999998


Q ss_pred             HHc-CCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           85 NHF-GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        85 ~~~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +.+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.+.+.        +++++++|..+..+
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~~ss~~~~~~  153 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPD--------ASVIFVGESHGETP  153 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCC--------CEEEEEeccccccC
Confidence            888 88999999999753 357788999999999999999999999999999987653        88999999999988


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCC-CeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDY-AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~-gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      .+++..|++||++++.|+++++.|+. ++ +|||+.|+||+++|++..+.....          ...++.+++|++..++
T Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~~i~v~~v~pG~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~  222 (239)
T PRK08703        154 KAYWGGFGASKAALNYLCKVAADEWE-RFGNLRANVLVPGPINSPQRIKSHPGE----------AKSERKSYGDVLPAFV  222 (239)
T ss_pred             CCCccchHHhHHHHHHHHHHHHHHhc-cCCCeEEEEEecCcccCccccccCCCC----------CccccCCHHHHHHHHH
Confidence            88889999999999999999999997 65 699999999999987644322111          0123569999999999


Q ss_pred             HhcCccCCccccccccc
Q 024976          242 YLASDAAVHRDLIHLLD  258 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~  258 (259)
                      |++++.+.++||+.|.+
T Consensus       223 ~~~~~~~~~~~g~~~~~  239 (239)
T PRK08703        223 WWASAESKGRSGEIVYL  239 (239)
T ss_pred             HHhCccccCcCCeEeeC
Confidence            99999999999999865

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=7.2e-39  Score=261.56  Aligned_cols=237  Identities=26%  Similarity=0.240  Sum_probs=205.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|+++||||+++||++++++|+++|++|++++|+.. ..++..+.....+.++.++.+|+++++++.++++++.+.++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            369999999999999999999999999999998854 2233333333335568999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |++|||+|.....++.+.+.++|++.+++|+.+++++++++++.|++.+.        ++||++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~iss~~~~~~~~~~~~Y~  153 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGY--------GRIINISSVNGLKGQFGQTNYS  153 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC--------eEEEEECChhhccCCCCChHHH
Confidence            99999999877777888999999999999999999999999999987654        8999999999998888999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCc
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVH  250 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (259)
                      ++|++++++++.++.+++ +.||+++.++||++.|+.... . .+.....+....|.+++.+++|+++++.+|+++.+.+
T Consensus       154 ~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  230 (245)
T PRK12824        154 AAKAGMIGFTKALASEGA-RYGITVNCIAPGYIATPMVEQ-M-GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGF  230 (245)
T ss_pred             HHHHHHHHHHHHHHHHHH-HhCeEEEEEEEcccCCcchhh-c-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccC
Confidence            999999999999999998 889999999999998765432 2 2334444556677888999999999999999998999


Q ss_pred             ccccccccC
Q 024976          251 RDLIHLLDD  259 (259)
Q Consensus       251 ~tG~~i~~D  259 (259)
                      ++|+.|.+|
T Consensus       231 ~~G~~~~~~  239 (245)
T PRK12824        231 ITGETISIN  239 (245)
T ss_pred             ccCcEEEEC
Confidence            999999887

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-38  Score=262.40  Aligned_cols=241  Identities=32%  Similarity=0.408  Sum_probs=212.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +++|+++||||+++||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|++++++++++++++.+.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999998888888888766778999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|+||||+|.....++.+.+.++++..+++|+.+++.+++.+++.|++++.        ++||++||..+..+.++...|
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~iss~~~~~~~~~~~~y  153 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGG--------GRIINMASVHGLVGSAGKAAY  153 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC--------eEEEEEcchhhccCCCCcchh
Confidence            999999999877777888899999999999999999999999999988764        899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC---------hH-HHHHHhhhhccCCCCCCHHHHHHH
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PE-EIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      +++|++++.+++.++.|+. +.||+++.++||.+.++.......         .. .....+....+.+++.+++|++++
T Consensus       154 ~~~k~a~~~~~~~l~~~~~-~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  232 (258)
T PRK12429        154 VSAKHGLIGLTKVVALEGA-THGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADY  232 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHH
Confidence            9999999999999999998 889999999999999765432211         11 112233344466789999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++|+++....++|+.+.+|
T Consensus       233 ~~~l~~~~~~~~~g~~~~~~  252 (258)
T PRK12429        233 ALFLASFAAKGVTGQAWVVD  252 (258)
T ss_pred             HHHHcCccccCccCCeEEeC
Confidence            99999988888999999886

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-38  Score=260.64  Aligned_cols=240  Identities=27%  Similarity=0.351  Sum_probs=207.3

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      |+++++|+++||||+++||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999987777777777665567888999999999999999999999


Q ss_pred             cCCccEEEECCCCCC---CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           87 FGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        87 ~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      ++++|+||||+|...   .+++.+.++++|++.+++|+.+++.++++++++|.+.+.        |+||++||..++.+ 
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~-  151 (250)
T PRK07774         81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGG--------GAIVNQSSTAAWLY-  151 (250)
T ss_pred             hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCC--------cEEEEEecccccCC-
Confidence            999999999999753   346677889999999999999999999999999987653        89999999877643 


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                        ...|++||++++.++++++.++. ..||+++.++||.++|+.... ..++.......+..+..++.+++|++++++++
T Consensus       152 --~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~  227 (250)
T PRK07774        152 --SNFYGLAKVGLNGLTQQLARELG-GMNIRVNAIAPGPIDTEATRT-VTPKEFVADMVKGIPLSRMGTPEDLVGMCLFL  227 (250)
T ss_pred             --ccccHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCcccCccccc-cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              56799999999999999999998 889999999999999766543 33444555566667777889999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++...+++|+.+.+|
T Consensus       228 ~~~~~~~~~g~~~~v~  243 (250)
T PRK07774        228 LSDEASWITGQIFNVD  243 (250)
T ss_pred             hChhhhCcCCCEEEEC
Confidence            9987777899887765

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.5e-38  Score=259.18  Aligned_cols=236  Identities=27%  Similarity=0.317  Sum_probs=207.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      |+++||||++|||++++++|+++|++|+++.| +.+..++..+++...+.++.++.+|++++++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999998887 55555655555555556789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +||||+|......+.+.+.++|++.+++|+.+++.+++.+++.|++++.        ++||++||..+..+.+++..|++
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~iss~~~~~~~~~~~~y~~  152 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGW--------GRIINISSVNGQKGQFGQTNYSA  152 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEcchhhcCCCCCcchhHH
Confidence            9999999877777788899999999999999999999999999987654        88999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHR  251 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (259)
                      +|++++.++++++.++. ..||+++.++||++.|+.... .. ++....+....|..++.+|+|+++.+.||++++..++
T Consensus       153 sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  229 (242)
T TIGR01829       153 AKAGMIGFTKALAQEGA-TKGVTVNTISPGYIATDMVMA-MR-EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYI  229 (242)
T ss_pred             HHHHHHHHHHHHHHHhh-hhCeEEEEEeeCCCcCccccc-cc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            99999999999999998 889999999999999765432 22 3334445556788899999999999999999989999


Q ss_pred             cccccccC
Q 024976          252 DLIHLLDD  259 (259)
Q Consensus       252 tG~~i~~D  259 (259)
                      +|+.|.+|
T Consensus       230 ~G~~~~~~  237 (242)
T TIGR01829       230 TGATLSIN  237 (242)
T ss_pred             cCCEEEec
Confidence            99999886

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-38  Score=261.10  Aligned_cols=240  Identities=30%  Similarity=0.365  Sum_probs=206.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++++++||||++|||++++++|+++|++|++. .|+.+++++..+.+...+.++.++.+|++|++++.++++++.+.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999998774 677777777777776556678899999999999999999998877


Q ss_pred             ------CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           88 ------GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        88 ------g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                            +++|++|||||....+++.+.+.+.|+..+++|+.+++++++++++.|.+.          +++|++||..+..
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------~~~v~~sS~~~~~  152 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE----------GRVINISSAEVRL  152 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC----------CEEEEECCHHhcC
Confidence                  479999999998777777888999999999999999999999999998653          6799999999988


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +.+++..|+++|++++.++++++.++. +.|++++.++||+++|+........+..........+.+++.+++|+++++.
T Consensus       153 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  231 (254)
T PRK12746        153 GFTGSIAYGLSKGALNTMTLPLAKHLG-ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVA  231 (254)
T ss_pred             CCCCCcchHhhHHHHHHHHHHHHHHHh-hcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence            888999999999999999999999998 8899999999999997765433333333333344556678889999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      +++++.+.+++|+.+.+|
T Consensus       232 ~l~~~~~~~~~g~~~~i~  249 (254)
T PRK12746        232 FLASSDSRWVTGQIIDVS  249 (254)
T ss_pred             HHcCcccCCcCCCEEEeC
Confidence            999988888999887664

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-39  Score=259.20  Aligned_cols=208  Identities=22%  Similarity=0.244  Sum_probs=174.9

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||++|||++++++|+++|++|++++|+.+++++..+++     ++.++.+|++++++++++++++.+   ++|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence            5899999999999999999999999999999988776665554     256789999999999999887653   69999


Q ss_pred             EECCCCCCC------CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           94 VNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        94 i~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |||+|....      .++.+ +.++|++.+++|+.++++++|+++|.|++.          |+||++||..    .+...
T Consensus        74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~----------g~Iv~isS~~----~~~~~  138 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSG----------GSIISVVPEN----PPAGS  138 (223)
T ss_pred             EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----------CeEEEEecCC----CCCcc
Confidence            999985321      12333 578999999999999999999999999642          8899999975    34567


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++...          . ...|.   .+|+|+++.+.||+|+.
T Consensus       139 ~Y~asKaal~~~~~~la~e~~-~~gI~v~~v~PG~v~t~~~~~----------~-~~~p~---~~~~~ia~~~~~l~s~~  203 (223)
T PRK05884        139 AEAAIKAALSNWTAGQAAVFG-TRGITINAVACGRSVQPGYDG----------L-SRTPP---PVAAEIARLALFLTTPA  203 (223)
T ss_pred             ccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccCchhhhh----------c-cCCCC---CCHHHHHHHHHHHcCch
Confidence            899999999999999999998 899999999999998764211          0 11232   38999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.++||+.|.+|
T Consensus       204 ~~~v~G~~i~vd  215 (223)
T PRK05884        204 ARHITGQTLHVS  215 (223)
T ss_pred             hhccCCcEEEeC
Confidence            999999999887

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=2.1e-38  Score=290.94  Aligned_cols=244  Identities=26%  Similarity=0.324  Sum_probs=211.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+.+|+++||||++|||++++++|+++|++|++++|+.+.++...+++...  ..++..+.+|++|+++++++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777776532  23578899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||.....++.+.+.++|+..+++|+.+++.+++.+++.|++++.       +|+||++||..+..+.++
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~-------~g~IV~iSS~~a~~~~~~  562 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL-------GGNIVFIASKNAVYAGKN  562 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CCEEEEEeChhhcCCCCC
Confidence            9999999999999877778888899999999999999999999999999987642       378999999999999899


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc-ccC-CC----------ChHHHHHHhhhhccCCCCCCH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA-GVS-KL----------APEEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~-~~~-~~----------~~~~~~~~~~~~~~~~~~~~~  233 (259)
                      ...|++||+++++++++++.|++ +.|||||+|+||.+.+.. .+. .+          ..++....+....+++++.+|
T Consensus       563 ~~aY~aSKaA~~~l~r~lA~el~-~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~p  641 (676)
T TIGR02632       563 ASAYSAAKAAEAHLARCLAAEGG-TYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFP  641 (676)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCH
Confidence            99999999999999999999998 899999999999986432 111 11          122223335566788899999


Q ss_pred             HHHHHHHHHhcCccCCcccccccccC
Q 024976          234 WDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+|+++.||+++.+.++||+.|.+|
T Consensus       642 eDVA~av~~L~s~~~~~~TG~~i~vD  667 (676)
T TIGR02632       642 ADIAEAVFFLASSKSEKTTGCIITVD  667 (676)
T ss_pred             HHHHHHHHHHhCCcccCCcCcEEEEC
Confidence            99999999999988899999999987

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-38  Score=260.91  Aligned_cols=213  Identities=18%  Similarity=0.152  Sum_probs=185.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC-CeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      |+++||||++|||++++++|+ +|++|++++|+.++++++.+++.+.+. .+.++.||++|+++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 599999999999999988888876554 478999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ++|||||.....++.+.+.+++.+.+++|+.+++.+++.++|.|.++..       +|+||++||..+..+.+....|++
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~a  152 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTA-------PAAIVAFSSIAGWRARRANYVYGS  152 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC-------CCEEEEEeccccccCCcCCcchhh
Confidence            9999999865555566777888899999999999999999999986531       389999999999999889999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      +|+|+.+|+++++.|++ ++||+||+|+||+++|++... ..            +.....+|||+|+.++++++..
T Consensus       153 sKaa~~~~~~~la~el~-~~~I~v~~v~PG~v~T~~~~~-~~------------~~~~~~~pe~~a~~~~~~~~~~  214 (246)
T PRK05599        153 TKAGLDAFCQGLADSLH-GSHVRLIIARPGFVIGSMTTG-MK------------PAPMSVYPRDVAAAVVSAITSS  214 (246)
T ss_pred             HHHHHHHHHHHHHHHhc-CCCceEEEecCCcccchhhcC-CC------------CCCCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999998 899999999999999764321 11            1111358999999999999864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.8e-38  Score=256.89  Aligned_cols=238  Identities=29%  Similarity=0.376  Sum_probs=204.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++++++||||++|||+++++.|+++|++|++++|+.++++...+++...+.++.++++|+++.++++++++.+.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999998888888888876677889999999999999999999988889


Q ss_pred             CccEEEECCCCCCCCC--------C-CCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           89 KLDILVNAAAGNFLVP--------A-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        89 ~id~li~~ag~~~~~~--------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      ++|++|||+|......        + .+.+.++|...+++|+.+++++.+.+++.|.++..       +++|+++||.. 
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~-------~~~iv~~ss~~-  153 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS-------KGVIINISSIA-  153 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEcccc-
Confidence            9999999999754322        2 56788999999999999999999999999986532       37899998864 


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      ..+.+....|+++|+++++++++++.++. ++||++++++||.+.|++... . .++..+.+....|.+++.+++|++++
T Consensus       154 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~a~~  230 (253)
T PRK08217        154 RAGNMGQTNYSASKAGVAAMTVTWAKELA-RYGIRVAAIAPGVIETEMTAA-M-KPEALERLEKMIPVGRLGEPEEIAHT  230 (253)
T ss_pred             ccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCCCcCccccc-c-CHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence            45667789999999999999999999998 889999999999999765532 2 23444555566788889999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +.+|++  ..+++|+.|.+|
T Consensus       231 ~~~l~~--~~~~~g~~~~~~  248 (253)
T PRK08217        231 VRFIIE--NDYVTGRVLEID  248 (253)
T ss_pred             HHHHHc--CCCcCCcEEEeC
Confidence            999995  468999999876

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-37  Score=257.02  Aligned_cols=236  Identities=23%  Similarity=0.317  Sum_probs=199.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++..+|+++||||++|||++++++|+++|++|++++++ .+.++...+++...+.++.++.+|++|.+++.++++++.+.
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999887654 45566667777666677899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++++|+||||||.....++.+.++++|++.+++|+.+++.+++++.+.|.++..        ++||+++|..+..+.+.+
T Consensus        85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~~s~~~~~~~p~~  156 (258)
T PRK09134         85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADAR--------GLVVNMIDQRVWNLNPDF  156 (258)
T ss_pred             cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------ceEEEECchhhcCCCCCc
Confidence            999999999999877777888899999999999999999999999999987543        889999998777777778


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+++|+++++++++++.++. +. |+|+.|+||++.|... .  ..... .......+.++..+++|+|++++++++ 
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~-~~-i~v~~i~PG~v~t~~~-~--~~~~~-~~~~~~~~~~~~~~~~d~a~~~~~~~~-  229 (258)
T PRK09134        157 LSYTLSKAALWTATRTLAQALA-PR-IRVNAIGPGPTLPSGR-Q--SPEDF-ARQHAATPLGRGSTPEEIAAAVRYLLD-  229 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc-CC-cEEEEeecccccCCcc-c--ChHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhc-
Confidence            8999999999999999999996 54 9999999999986431 1  11222 223344567788999999999999997 


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                       ..+++|+.+.+|
T Consensus       230 -~~~~~g~~~~i~  241 (258)
T PRK09134        230 -APSVTGQMIAVD  241 (258)
T ss_pred             -CCCcCCCEEEEC
Confidence             457899988776

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-38  Score=256.78  Aligned_cols=234  Identities=28%  Similarity=0.358  Sum_probs=200.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||+++||+++++.|+++|++|++++|+.+..++..+..     .+.++.+|+++.+++.++++.    .+
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~~   76 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----AG   76 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----hC
Confidence            478999999999999999999999999999999999877665544433     256788999999998887765    47


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.+.+++.       .++||++||..++.+.+....
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~  149 (245)
T PRK07060         77 AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR-------GGSIVNVSSQAALVGLPDHLA  149 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-------CcEEEEEccHHHcCCCCCCcH
Confidence            8999999999877677777889999999999999999999999999876531       278999999999999889999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+.+|++++.++++++.++. +.||++++++||.+.|+.....+........+....|.+++.+++|+++++++++++.+
T Consensus       150 y~~sK~a~~~~~~~~a~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  228 (245)
T PRK07060        150 YCASKAALDAITRVLCVELG-PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAA  228 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHh-hhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            99999999999999999997 88999999999999977644333333333444556678889999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .+++|+.|.+|
T Consensus       229 ~~~~G~~~~~~  239 (245)
T PRK07060        229 SMVSGVSLPVD  239 (245)
T ss_pred             CCccCcEEeEC
Confidence            99999999887

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-37  Score=255.33  Aligned_cols=238  Identities=27%  Similarity=0.379  Sum_probs=205.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC----hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~----~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .+++++++||||+++||+++++.|+++|++|++++|.    .+..+...+++...+.++.++.+|+++.++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999987653    444555556666666778999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHH-HHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      +.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++. +.++++..        +++|++||..+..+.
T Consensus        83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~  154 (249)
T PRK12827         83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRG--------GRIVNIASVAGVRGN  154 (249)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCC--------eEEEEECCchhcCCC
Confidence            988999999999998877888889999999999999999999999999 56655543        789999999999888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +++..|+.+|++++.++++++.+++ +.||+++.|+||+++|+........    .......|..++.+++|+++.++++
T Consensus       155 ~~~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~~~l  229 (249)
T PRK12827        155 RGQVNYAASKAGLIGLTKTLANELA-PRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPVQRLGEPDEVAALVAFL  229 (249)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEECCcCCCcccccchH----HHHHhhCCCcCCcCHHHHHHHHHHH
Confidence            8999999999999999999999997 8899999999999997654433211    2334455667778999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++...+++|+.+.+|
T Consensus       230 ~~~~~~~~~g~~~~~~  245 (249)
T PRK12827        230 VSDAASYVTGQVIPVD  245 (249)
T ss_pred             cCcccCCccCcEEEeC
Confidence            9998999999999886

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=4.3e-38  Score=265.43  Aligned_cols=237  Identities=15%  Similarity=0.113  Sum_probs=191.9

Q ss_pred             EEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 024976           16 LLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV   94 (259)
Q Consensus        16 lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li   94 (259)
                      +||||++|||++++++|+++| ++|++++|+.+..++..+++...+.++.++.+|++|.++++++++++.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999998888777777754455788899999999999999999998889999999


Q ss_pred             ECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------
Q 024976           95 NAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------  162 (259)
Q Consensus        95 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  162 (259)
                      ||||+... .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.      .+|+||++||..+..+           
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~------~~g~IV~vsS~~~~~~~~~~~~~~~~~  154 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY------PSKRLIIVGSITGNTNTLAGNVPPKAN  154 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC------CCCEEEEEeccccccccccccCCCccc
Confidence            99997543 35667889999999999999999999999999987641      0289999999876421           


Q ss_pred             ------------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccc-cCCcccCCCChHHH
Q 024976          163 ------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEI  217 (259)
Q Consensus       163 ------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v-~t~~~~~~~~~~~~  217 (259)
                                              ..+..+|++||+|...+++.+++++....||+||+|+||++ .|++... ..+...
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~-~~~~~~  233 (308)
T PLN00015        155 LGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE-HIPLFR  233 (308)
T ss_pred             hhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc-ccHHHH
Confidence                                    12457799999999999999999996236999999999999 5555432 222111


Q ss_pred             -HHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          218 -RSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       218 -~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                       ........+.+++.+||+.|+.+++++++...+.+|+.+..|
T Consensus       234 ~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~  276 (308)
T PLN00015        234 LLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWN  276 (308)
T ss_pred             HHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccC
Confidence             001122345567889999999999999988888999987643

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.8e-38  Score=260.06  Aligned_cols=229  Identities=25%  Similarity=0.249  Sum_probs=194.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++|+++||||+||||++++++|+++|++|++++|+.+++++..    .  .++.++.+|++|+++++++++++.+.++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i   75 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--LGVHPLSLDVTDEASIKAAVDTIIAEEGRI   75 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999999999999987655432    1  247889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |++|||||....+++.+.++++|+..+++|+.+++.+++.++|.|++++.        |+||++||..+..+.+....|+
T Consensus        76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~--------g~iv~isS~~~~~~~~~~~~Y~  147 (273)
T PRK06182         76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS--------GRIINISSMGGKIYTPLGAWYH  147 (273)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEcchhhcCCCCCccHhH
Confidence            99999999887788889999999999999999999999999999988754        8999999998888888888899


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---C----C---hHH----HHHHhhhhccCCCCCCHHHH
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---L----A---PEE----IRSKATDYMAAYKFGEKWDI  236 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---~----~---~~~----~~~~~~~~~~~~~~~~~~dv  236 (259)
                      ++|+++++|+++++.|+. +.||+++.|+||+++|++....   .    .   ..+    ..+.+....+.+++.+|+|+
T Consensus       148 ~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  226 (273)
T PRK06182        148 ATKFALEGFSDALRLEVA-PFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVI  226 (273)
T ss_pred             HHHHHHHHHHHHHHHHhc-ccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHH
Confidence            999999999999999998 8999999999999998753211   0    0   011    11233344467789999999


Q ss_pred             HHHHHHhcCc---cCCccccc
Q 024976          237 AMAALYLASD---AAVHRDLI  254 (259)
Q Consensus       237 a~~~~~l~s~---~~~~~tG~  254 (259)
                      |++++++++.   ...|+.|.
T Consensus       227 A~~i~~~~~~~~~~~~~~~g~  247 (273)
T PRK06182        227 ADAISKAVTARRPKTRYAVGF  247 (273)
T ss_pred             HHHHHHHHhCCCCCceeecCc
Confidence            9999999984   45677664

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.8e-37  Score=254.12  Aligned_cols=242  Identities=30%  Similarity=0.364  Sum_probs=212.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||+++||++++++|+++|++|++++|+.++.....+++...+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          2 RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999999999999888777777777666678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~  166 (259)
                      +++|++|||+|.....++.+.+.++++..++.|+.+++.++++++++|.+++.        ++||++||..+. .+.++.
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~ii~~ss~~~~~~~~~~~  153 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG--------GRIVLTSSVAGPRVGYPGL  153 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------cEEEEEechHhhccCCCCc
Confidence            99999999999877777788899999999999999999999999999987654        889999999888 788888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+.+|++++.++++++.++. +.|++++.++||.+.++...... +......+....|.+++.+++|+++++.+++++
T Consensus       154 ~~y~~sK~a~~~~~~~~~~~~~-~~~i~~~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  231 (251)
T PRK12826        154 AHYAASKAGLVGFTRALALELA-ARNITVNSVHPGGVDTPMAGNLG-DAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASD  231 (251)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEeeCCCCcchhhhcC-chHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999997 88999999999999977543322 222223344556777899999999999999998


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      ...+++|+.+.+|
T Consensus       232 ~~~~~~g~~~~~~  244 (251)
T PRK12826        232 EARYITGQTLPVD  244 (251)
T ss_pred             cccCcCCcEEEEC
Confidence            8889999999876

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-37  Score=255.19  Aligned_cols=243  Identities=23%  Similarity=0.281  Sum_probs=203.6

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +|+++||||+++||++++++|+++|++|++++|+. +..+...+.+...+.++.++.+|+++++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999864 34455566665556679999999999999999999999999999


Q ss_pred             cEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           91 DILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        91 d~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      |++|||+|...  ..++.+.++++|++.+++|+.+++.+++++.+.|.++..+..  ...++||++||..+..+.++...
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~  159 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEE--LPHRSIVFVSSVNAIMVSPNRGE  159 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCC--CCCcEEEEECChhhccCCCCCcc
Confidence            99999999753  356778899999999999999999999999999987643111  01267999999999988888899


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhh-hhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      |+++|+++++++++++.|+. ++||++++|+||.+.|+..... .+ .....+. ...|..++.+++|+++++.+++++.
T Consensus       160 Y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~v~t~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~  236 (256)
T PRK12745        160 YCISKAGLSMAAQLFAARLA-EEGIGVYEVRPGLIKTDMTAPV-TA-KYDALIAKGLVPMPRWGEPEDVARAVAALASGD  236 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHH-HhCCEEEEEecCCCcCcccccc-ch-hHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCc
Confidence            99999999999999999998 8899999999999987654322 11 1222221 2457788999999999999999998


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ..+++|+.+.+|
T Consensus       237 ~~~~~G~~~~i~  248 (256)
T PRK12745        237 LPYSTGQAIHVD  248 (256)
T ss_pred             ccccCCCEEEEC
Confidence            899999998876

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-37  Score=255.46  Aligned_cols=236  Identities=25%  Similarity=0.333  Sum_probs=203.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++||||+++||++++++|+++|++|++++|+.+.++.+.+.+.  +.++.++.+|+.|.+++..+++++.+.++++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999999999887777776663  34688999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ++|||+|.....++.+.++++|...+++|+.+++.+++++++.+.+++.        ++||++||..+..+ .+...|+.
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~-~~~~~y~~  150 (257)
T PRK07074         80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSR--------GAVVNIGSVNGMAA-LGHPAYSA  150 (257)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------eEEEEEcchhhcCC-CCCcccHH
Confidence            9999999876677778899999999999999999999999999987654        88999999766543 35678999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-hHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVH  250 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (259)
                      +|++++.++++++.|++ ++||+|+.++||.+.|+....... .++.........|..++.+++|+++++++|+++...+
T Consensus       151 sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~  229 (257)
T PRK07074        151 AKAGLIHYTKLLAVEYG-RFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARA  229 (257)
T ss_pred             HHHHHHHHHHHHHHHHh-HhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcC
Confidence            99999999999999998 889999999999999776433221 2233333334567788999999999999999998899


Q ss_pred             ccccccccC
Q 024976          251 RDLIHLLDD  259 (259)
Q Consensus       251 ~tG~~i~~D  259 (259)
                      ++|+.+.+|
T Consensus       230 ~~g~~~~~~  238 (257)
T PRK07074        230 ITGVCLPVD  238 (257)
T ss_pred             cCCcEEEeC
Confidence            999999876

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.8e-37  Score=252.35  Aligned_cols=240  Identities=32%  Similarity=0.441  Sum_probs=210.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.+|+++||||+++||++++++|+++|++|+++ +|+.+..+...+.+...+.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4778999999999999999999999999999988 998887777777776656678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++||++|.....++.+.+.+++++.+++|+.+++.+++.+.+.+.+++.        +++|++||..+..+.+...
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~v~~sS~~~~~~~~~~~  153 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKS--------GVIVNISSIWGLIGASCEV  153 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEECCHhhccCCCCcc
Confidence            99999999999876667778899999999999999999999999999987654        8899999999988888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+.+|++++.++++++.++. ..||++++|+||.++|+.. ....+. .........+.++..+++|+++.+.+++++.
T Consensus       154 ~y~~sK~a~~~~~~~~~~~~~-~~gi~~~~v~pg~v~t~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (247)
T PRK05565        154 LYSASKGAVNAFTKALAKELA-PSGIRVNAVAPGAIDTEMW-SSFSEE-DKEGLAEEIPLGRLGKPEEIAKVVLFLASDD  230 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEECCccCccc-cccChH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence            999999999999999999998 8899999999999986543 333322 2222223456677889999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ...++|+.|.+|
T Consensus       231 ~~~~~g~~~~~~  242 (247)
T PRK05565        231 ASYITGQIITVD  242 (247)
T ss_pred             cCCccCcEEEec
Confidence            999999999887

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-37  Score=256.14  Aligned_cols=236  Identities=19%  Similarity=0.205  Sum_probs=198.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCC-eEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~-v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      |+++||||++|||++++++|+++|++|++++|+.+.++...+++...+.. +.++.+|++++++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            58999999999999999999999999999999988888887777655443 45689999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ++|||+|....+++.+.+.++|+..+++|+.+++.++++++|.|.+++.       +|+||++||..+..+.+....|++
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~  153 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR-------GGHLVNVSSAAGLVALPWHAAYSA  153 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CcEEEEEccccccCCCCCCcchHH
Confidence            9999999877778888999999999999999999999999999976432       389999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-----hHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      +|+++.+|+++++.|+. +.||+|+.|+||.++|+.......     .++........ ..++..+|+|+|+.+++++. 
T Consensus       154 sK~a~~~~~~~l~~e~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~-  230 (272)
T PRK07832        154 SKFGLRGLSEVLRFDLA-RHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVE-  230 (272)
T ss_pred             HHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHh-
Confidence            99999999999999998 889999999999999875433210     11111111221 24567899999999999995 


Q ss_pred             cCCccccccccc
Q 024976          247 AAVHRDLIHLLD  258 (259)
Q Consensus       247 ~~~~~tG~~i~~  258 (259)
                      ...+++++.+.+
T Consensus       231 ~~~~~~~~~~~~  242 (272)
T PRK07832        231 KNRYLVYTSPDI  242 (272)
T ss_pred             cCCeEEecCcch
Confidence            467788876543

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-37  Score=256.54  Aligned_cols=217  Identities=23%  Similarity=0.246  Sum_probs=191.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++++++||||+||||++++++|+++|++|++++|+.+.+++..+++.    ++.++.+|++|+++++++++++.+.++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLG   77 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999888777666553    477899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++.        |+||++||..+..+.++...
T Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~  149 (273)
T PRK07825         78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGR--------GHVVNVASLAGKIPVPGMAT  149 (273)
T ss_pred             CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------CEEEEEcCccccCCCCCCcc
Confidence            9999999999887788888999999999999999999999999999988765        89999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||+++.+|+++++.|+. +.||+++.|+||++.|++.....           ........+++|+|+.+++++....
T Consensus       150 Y~asKaa~~~~~~~l~~el~-~~gi~v~~v~Pg~v~t~~~~~~~-----------~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        150 YCASKHAVVGFTDAARLELR-GTGVHVSVVLPSFVNTELIAGTG-----------GAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhh-ccCcEEEEEeCCcCcchhhcccc-----------cccCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999998 89999999999999876533210           0112246789999999999987644


Q ss_pred             C
Q 024976          249 V  249 (259)
Q Consensus       249 ~  249 (259)
                      .
T Consensus       218 ~  218 (273)
T PRK07825        218 P  218 (273)
T ss_pred             C
Confidence            3

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=4.8e-39  Score=246.94  Aligned_cols=228  Identities=25%  Similarity=0.295  Sum_probs=184.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ++++||.+++||+.||||++++++|+++|..+.+++.+.+..+. .+++++.  ..++.|++||+++..++++.++++.+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEA-IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHH-HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            46889999999999999999999999999998888877776544 4444433  45789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .||.+|++||+||+..        +.+|++++.+|+.|.++-+..++|+|.++..+.     +|-|||+||..|+.|.+.
T Consensus        80 ~fg~iDIlINgAGi~~--------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~-----GGiIvNmsSv~GL~P~p~  146 (261)
T KOG4169|consen   80 TFGTIDILINGAGILD--------DKDWERTINVNLTGVINGTQLALPYMDKKQGGK-----GGIIVNMSSVAGLDPMPV  146 (261)
T ss_pred             HhCceEEEEccccccc--------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCC-----CcEEEEeccccccCcccc
Confidence            9999999999999843        567999999999999999999999998775322     699999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCC------CChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSK------LAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      .+.|++||+++.+|+|||+...- ++.|||++++|||++.|+....-      +..++......+..|   -..|.+++.
T Consensus       147 ~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~---~q~~~~~a~  223 (261)
T KOG4169|consen  147 FPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP---KQSPACCAI  223 (261)
T ss_pred             chhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc---cCCHHHHHH
Confidence            99999999999999999998733 47899999999999987543211      112222233333333   237888888


Q ss_pred             HHHHhcCccCCcccccc
Q 024976          239 AALYLASDAAVHRDLIH  255 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~  255 (259)
                      .++-.+..   ..||+-
T Consensus       224 ~~v~aiE~---~~NGai  237 (261)
T KOG4169|consen  224 NIVNAIEY---PKNGAI  237 (261)
T ss_pred             HHHHHHhh---ccCCcE
Confidence            88877743   345543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-37  Score=274.31  Aligned_cols=236  Identities=22%  Similarity=0.255  Sum_probs=199.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh--hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+++|+++||||++|||++++++|+++|++|+++++..  +.+++..+++     ...++.+|+++.++++++++.+.+
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~  280 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAE  280 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999998853  2233333222     245789999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .++++|++|||||....+.+.+.++++|+..+++|+.+++++.+++.+.+..+..        ++||++||..+..+.+.
T Consensus       281 ~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------g~iv~~SS~~~~~g~~~  352 (450)
T PRK08261        281 RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDG--------GRIVGVSSISGIAGNRG  352 (450)
T ss_pred             hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCC--------CEEEEECChhhcCCCCC
Confidence            9999999999999887778888999999999999999999999999997654433        88999999999989899


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      +..|+++|+++++|+++++.|+. ++||++|+|+||.++|++.. ..+. ...+......++.+.+.|+|+++++.||++
T Consensus       353 ~~~Y~asKaal~~~~~~la~el~-~~gi~v~~v~PG~i~t~~~~-~~~~-~~~~~~~~~~~l~~~~~p~dva~~~~~l~s  429 (450)
T PRK08261        353 QTNYAASKAGVIGLVQALAPLLA-ERGITINAVAPGFIETQMTA-AIPF-ATREAGRRMNSLQQGGLPVDVAETIAWLAS  429 (450)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeCcCcchhhh-ccch-hHHHHHhhcCCcCCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999998 89999999999999875432 2221 111112223456778899999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       430 ~~~~~itG~~i~v~  443 (450)
T PRK08261        430 PASGGVTGNVVRVC  443 (450)
T ss_pred             hhhcCCCCCEEEEC
Confidence            99999999999887

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.1e-36  Score=248.94  Aligned_cols=240  Identities=32%  Similarity=0.386  Sum_probs=207.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++||||+|+||++++++|+++|++|+++.|+.. ..+...+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            568899999999999999999999999999988877654 3555666666556678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++||++|.....++.+.+.+++++.+++|+.+++.+.+++.+++.+.+.        +++|++||..+..+.+...
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~v~iss~~~~~~~~~~~  153 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRS--------GRIINISSVVGLMGNPGQA  153 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------eEEEEEcccccCcCCCCCc
Confidence            99999999999877777778889999999999999999999999999987654        7899999998888888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.+++.++.++. ..||+++.++||+++++.... . .+..........+.+++.+++|+++++.+|+++.
T Consensus       154 ~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~v~pg~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (248)
T PRK05557        154 NYAASKAGVIGFTKSLARELA-SRGITVNAVAPGFIETDMTDA-L-PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDE  230 (248)
T ss_pred             hhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCccCCccccc-c-ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999997 889999999999998655332 2 2333344455567778899999999999999988


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.+++|+.|.+|
T Consensus       231 ~~~~~g~~~~i~  242 (248)
T PRK05557        231 AAYITGQTLHVN  242 (248)
T ss_pred             cCCccccEEEec
Confidence            899999998876

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=3e-37  Score=281.20  Aligned_cols=233  Identities=22%  Similarity=0.260  Sum_probs=201.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+++++++||||+||||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            44678999999999999999999999999999999999988888888887777789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||....+++.+.+.++|++.+++|+.++++++++++|.|.+++.       +|+||++||..++.+.++..
T Consensus       391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~  463 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT-------GGHIVNVASAAAYAPSRSLP  463 (582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEECChhhccCCCCCc
Confidence            99999999999987788889999999999999999999999999999987642       38999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC----hH--HHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PE--EIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      .|++||+|+++|+++++.|++ ++||+|++|+||+++|++......    .+  +.........+..+..+|||+|++++
T Consensus       464 ~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~  542 (582)
T PRK05855        464 AYATSKAAVLMLSECLRAELA-AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIV  542 (582)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHH
Confidence            999999999999999999998 899999999999999876443221    11  11111112223345568999999999


Q ss_pred             HhcCccC
Q 024976          242 YLASDAA  248 (259)
Q Consensus       242 ~l~s~~~  248 (259)
                      +.++...
T Consensus       543 ~~~~~~~  549 (582)
T PRK05855        543 DAVKRNK  549 (582)
T ss_pred             HHHHcCC
Confidence            9997543

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-37  Score=254.59  Aligned_cols=232  Identities=23%  Similarity=0.280  Sum_probs=197.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+|+++||||+||||++++++|+++|++|++++|+.+.++...+.+   +.++.++++|++|+++++++++++.+.++++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999987766554433   3468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |++|||||....+++.+.+.++|++.+++|+.+++.++++++|+|++++.        ++||++||..+..+.+....|+
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~vsS~~~~~~~~~~~~Y~  150 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRS--------GHIIQISSIGGISAFPMSGIYH  150 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEEcChhhcCCCCCccHHH
Confidence            99999999888888889999999999999999999999999999987654        8899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-------hHHHHHHhhhhccCCCC-CCHHHHHHHHHH
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAYKF-GEKWDIAMAALY  242 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~dva~~~~~  242 (259)
                      ++|++++.+++.++.|++ +.||+|+.|+||+++|+.......       .+.......+..+..++ ++|+|+++.+++
T Consensus       151 ~sKaa~~~~~~~la~e~~-~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~  229 (275)
T PRK08263        151 ASKWALEGMSEALAQEVA-EFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLK  229 (275)
T ss_pred             HHHHHHHHHHHHHHHHhh-hhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence            999999999999999998 889999999999999876532111       11222334444566677 899999999999


Q ss_pred             hcCccC---Cccccc
Q 024976          243 LASDAA---VHRDLI  254 (259)
Q Consensus       243 l~s~~~---~~~tG~  254 (259)
                      +++...   +++.|.
T Consensus       230 l~~~~~~~~~~~~~~  244 (275)
T PRK08263        230 LVDAENPPLRLFLGS  244 (275)
T ss_pred             HHcCCCCCeEEEeCc
Confidence            997642   455553

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-37  Score=249.27  Aligned_cols=226  Identities=25%  Similarity=0.285  Sum_probs=196.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++|+++||||+++||++++++|+++|++|++++|+.+..+...++++..+.++.++.+|+++++++.++++++.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999888777777777666679999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |++|||+|.....++.+.+.+++++.+++|+.+++.+++.++++|.+++.        ++||++||..+..+.+++..|+
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~  156 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGG--------GLIINVSSIAARNAFPQWGAYC  156 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--------cEEEEEccHHhCcCCCCccHHH
Confidence            99999999877777788899999999999999999999999999987654        8899999999988888899999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCc
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVH  250 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (259)
                      .+|++++.++++++.|+. +.||++++|.||++.|+.......        .......++.+++|+|+++++|++++...
T Consensus       157 ~sK~~~~~~~~~~a~e~~-~~gi~v~~i~pg~i~t~~~~~~~~--------~~~~~~~~~~~~~~va~~~~~l~~~~~~~  227 (241)
T PRK07454        157 VSKAALAAFTKCLAEEER-SHGIRVCTITLGAVNTPLWDTETV--------QADFDRSAMLSPEQVAQTILHLAQLPPSA  227 (241)
T ss_pred             HHHHHHHHHHHHHHHHhh-hhCCEEEEEecCcccCCccccccc--------ccccccccCCCHHHHHHHHHHHHcCCccc
Confidence            999999999999999998 889999999999999775322110        01112245789999999999999977554


Q ss_pred             ccc
Q 024976          251 RDL  253 (259)
Q Consensus       251 ~tG  253 (259)
                      +.+
T Consensus       228 ~~~  230 (241)
T PRK07454        228 VIE  230 (241)
T ss_pred             eee
Confidence            443

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-36  Score=248.76  Aligned_cols=240  Identities=26%  Similarity=0.325  Sum_probs=203.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEE-EeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      |+++||||+++||++++++|+++|++|++ ..|+.+..++..+++...+.++.++++|++|+++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999876 46777767777777766666788999999999999999999999999999


Q ss_pred             EEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-chhh
Q 024976           92 ILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHV  169 (259)
Q Consensus        92 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~Y  169 (259)
                      ++|||+|.. ...++.+.+.++|+..+++|+.+++.+++++++.+.++....     +|+||++||..+..+.+. +..|
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~-----~g~~v~~sS~~~~~~~~~~~~~Y  156 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGS-----GGAIVNVSSAASRLGAPGEYVDY  156 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC-----CcEEEEECchhhccCCCCcccch
Confidence            999999975 445677889999999999999999999999999998753211     378999999988877765 4689


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      +++|++++.++++++.|+. ++||+++.|+||.++|+...... .+..........|..++.+++|+++.+++++++...
T Consensus       157 ~~sK~~~~~~~~~l~~~~~-~~~i~v~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  234 (247)
T PRK09730        157 AASKGAIDTLTTGLSLEVA-AQGIRVNCVRPGFIYTEMHASGG-EPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKAS  234 (247)
T ss_pred             HhHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCCCcCcccccCC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhc
Confidence            9999999999999999998 88999999999999987543322 222333344556777888999999999999999888


Q ss_pred             cccccccccC
Q 024976          250 HRDLIHLLDD  259 (259)
Q Consensus       250 ~~tG~~i~~D  259 (259)
                      +++|+.+.+|
T Consensus       235 ~~~g~~~~~~  244 (247)
T PRK09730        235 YVTGSFIDLA  244 (247)
T ss_pred             CccCcEEecC
Confidence            9999998876

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=252.67  Aligned_cols=226  Identities=21%  Similarity=0.223  Sum_probs=195.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||+||||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++++++.++++++.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999998888888888777778999999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      ||||+|....+.+.+.+.++|++.+++|+.+++.++++++|.|.+++.        ++||++||..+..+.+....|+++
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~vsS~~~~~~~~~~~~Y~~s  152 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKS--------GRIVNIASMAGLMQGPAMSSYNVA  152 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCC--------CEEEEECChhhcCCCCCchHHHHH
Confidence            999999887788888999999999999999999999999999987653        889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh-HHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       173 K~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+++++++++++.|+. +.||+++.|+||+++|+........ +..... ..........+++|+|+.++..+....
T Consensus       153 Kaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vA~~i~~~l~~~~  227 (270)
T PRK05650        153 KAGVVALSETLLVELA-DDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQ-VGKLLEKSPITAADIADYIYQQVAKGE  227 (270)
T ss_pred             HHHHHHHHHHHHHHhc-ccCcEEEEEecCccccCcccccccCchhHHHH-HHHHhhcCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999998 8899999999999998754432211 111111 111122345789999999999987644

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-37  Score=247.87  Aligned_cols=227  Identities=24%  Similarity=0.300  Sum_probs=193.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+|+++||||+++||++++++|+++|++|++++|+.+.      .   .  ...++.+|+++.++++++++++.+.+ ++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   69 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------D---F--PGELFACDLADIEQTAATLAQINEIH-PV   69 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------c---c--CceEEEeeCCCHHHHHHHHHHHHHhC-CC
Confidence            57899999999999999999999999999999998653      0   0  12578999999999999999988876 58


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |++|||+|.....++.+.+.++|++.+++|+.+++.+.++++|.|++.+.        ++||++||.. ..+.+....|+
T Consensus        70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~-~~~~~~~~~Y~  140 (234)
T PRK07577         70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQ--------GRIVNICSRA-IFGALDRTSYS  140 (234)
T ss_pred             cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEcccc-ccCCCCchHHH
Confidence            99999999877778888899999999999999999999999999987654        8999999985 34667788999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-hHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      ++|+++++|+++++.|++ +.||++++|+||++.|+....... .++.........+.+++.+|+|+++.+++|+++...
T Consensus       141 ~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  219 (234)
T PRK07577        141 AAKSALVGCTRTWALELA-EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAG  219 (234)
T ss_pred             HHHHHHHHHHHHHHHHHH-hhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccC
Confidence            999999999999999998 889999999999999876433221 122223344456777888999999999999999889


Q ss_pred             cccccccccC
Q 024976          250 HRDLIHLLDD  259 (259)
Q Consensus       250 ~~tG~~i~~D  259 (259)
                      +++|+.|.+|
T Consensus       220 ~~~g~~~~~~  229 (234)
T PRK07577        220 FITGQVLGVD  229 (234)
T ss_pred             CccceEEEec
Confidence            9999999876

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-36  Score=252.06  Aligned_cols=232  Identities=21%  Similarity=0.172  Sum_probs=193.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+|+++||||+||||++++++|+++|++|++++|+.+.++.+.+.   .+.++.++.+|++|++++.++++++.+.++++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999998765554332   24468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |++|||||....+++.+.+.++|++.+++|+.+++.++++++|+|++++.        ++||++||..+..+.++...|+
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~iSS~~~~~~~~~~~~Y~  151 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRR--------GHIVNITSMGGLITMPGIGYYC  151 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCC--------CEEEEEecccccCCCCCcchhH
Confidence            99999999877778888999999999999999999999999999987654        8899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-----hHHHHH------HhhhhccCCCCCCHHHHHHH
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRS------KATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~dva~~  239 (259)
                      ++|+++++++++++.|++ +.|++++.|+||.++|+.......     .++...      ......+..++.+|+|++++
T Consensus       152 ~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  230 (277)
T PRK06180        152 GSKFALEGISESLAKEVA-PFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQA  230 (277)
T ss_pred             HHHHHHHHHHHHHHHHhh-hhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHH
Confidence            999999999999999998 889999999999998764322111     111111      11122345668899999999


Q ss_pred             HHHhcCcc---CCccccc
Q 024976          240 ALYLASDA---AVHRDLI  254 (259)
Q Consensus       240 ~~~l~s~~---~~~~tG~  254 (259)
                      +++++...   ..|+.|.
T Consensus       231 ~~~~l~~~~~~~~~~~g~  248 (277)
T PRK06180        231 ILAAVESDEPPLHLLLGS  248 (277)
T ss_pred             HHHHHcCCCCCeeEeccH
Confidence            99998754   4566553

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=253.89  Aligned_cols=222  Identities=21%  Similarity=0.252  Sum_probs=188.8

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .....+++|+++||||+||||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|++++.++++++.
T Consensus        33 ~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         33 RQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            33456889999999999999999999999999999999999988888888887666678899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCC--CHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-  161 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-  161 (259)
                      +.+|++|++|||||.....++.+.  ++++++..+++|+.+++.++++++|+|.+++.        |+||++||..+.. 
T Consensus       113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~  184 (293)
T PRK05866        113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGD--------GHIINVATWGVLSE  184 (293)
T ss_pred             HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cEEEEECChhhcCC
Confidence            999999999999998766665543  46889999999999999999999999987764        8999999976654 


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +.+....|+++|+|+++|+++++.|+. ++||+|+.|+||.++|++......          . ......+|+++|+.++
T Consensus       185 ~~p~~~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v~pg~v~T~~~~~~~~----------~-~~~~~~~pe~vA~~~~  252 (293)
T PRK05866        185 ASPLFSVYNASKAALSAVSRVIETEWG-DRGVHSTTLYYPLVATPMIAPTKA----------Y-DGLPALTADEAAEWMV  252 (293)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEcCcccCcccccccc----------c-cCCCCCCHHHHHHHHH
Confidence            356778999999999999999999998 899999999999999876532110          0 0112358999999988


Q ss_pred             HhcCc
Q 024976          242 YLASD  246 (259)
Q Consensus       242 ~l~s~  246 (259)
                      ..+..
T Consensus       253 ~~~~~  257 (293)
T PRK05866        253 TAART  257 (293)
T ss_pred             HHHhc
Confidence            87754

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-36  Score=247.61  Aligned_cols=231  Identities=24%  Similarity=0.353  Sum_probs=200.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCC--CHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVR--KREDAVRVVESTI   84 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~--~~~~~~~~~~~~~   84 (259)
                      ..+++|+++||||+++||.+++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++  ++++++++++.+.
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888888777776543 45777788886  7899999999999


Q ss_pred             HHcCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           85 NHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      +.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++++|.+++.        ++||++||..+..+.
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~--------~~iv~~ss~~~~~~~  159 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPA--------ASLVFTSSSVGRQGR  159 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCC--------CEEEEEccHhhcCCC
Confidence            99999999999999753 356778889999999999999999999999999988764        889999999998888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +.+..|++||++++.+++.++.++. ..||+++.++||.+.|+.........          ...++.+|+|+++.++|+
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~~~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~  228 (247)
T PRK08945        160 ANWGAYAVSKFATEGMMQVLADEYQ-GTNLRVNCINPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYLYL  228 (247)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhc-ccCEEEEEEecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHHHH
Confidence            8899999999999999999999998 88999999999999875322111111          124578999999999999


Q ss_pred             cCccCCcccccccc
Q 024976          244 ASDAAVHRDLIHLL  257 (259)
Q Consensus       244 ~s~~~~~~tG~~i~  257 (259)
                      +++.+++++|+.+-
T Consensus       229 ~~~~~~~~~g~~~~  242 (247)
T PRK08945        229 MGDDSRRKNGQSFD  242 (247)
T ss_pred             hCccccccCCeEEe
Confidence            99999999999764

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=4.5e-36  Score=250.84  Aligned_cols=241  Identities=17%  Similarity=0.173  Sum_probs=196.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++.+.+.+|
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999998888888888776666788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||....+++.+.+.++|+..+++|+.+++.++++++|.|.++.....  ...|+||++||..+..+.+....
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~  160 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDP--AYEGHIVNTASMAGLLAPPAMGI  160 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCC--CCCeEEEEeCChhhccCCCCCcc
Confidence            9999999999887778888999999999999999999999999999987643110  11278999999999998888999


Q ss_pred             hHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCCC-hHH------------HHHHhhhhccCCCCCCHH
Q 024976          169 VSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLA-PEE------------IRSKATDYMAAYKFGEKW  234 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~~  234 (259)
                      |+++|++++.|+++++.|++ ...+||++.++||++.|+....... +..            ...............+++
T Consensus       161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  240 (287)
T PRK06194        161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAE  240 (287)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHH
Confidence            99999999999999999986 2457999999999998765432110 100            111111111111236999


Q ss_pred             HHHHHHHHhcCccCCcc
Q 024976          235 DIAMAALYLASDAAVHR  251 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~  251 (259)
                      |+|+.+..++.....++
T Consensus       241 dva~~i~~~~~~~~~~~  257 (287)
T PRK06194        241 EVAQLVFDAIRAGRFYI  257 (287)
T ss_pred             HHHHHHHHHHHcCCeEE
Confidence            99999999886544443

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=249.38  Aligned_cols=236  Identities=16%  Similarity=0.147  Sum_probs=193.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC--
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK--   89 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~--   89 (259)
                      |+++||||++|||++++++|+++|++|++++|+. +.++...   ...+.++.++.+|++++++++++++++.+.++.  
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA---EQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH---hccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            6899999999999999999999999999999986 3333222   223457889999999999999999998877653  


Q ss_pred             cc--EEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           90 LD--ILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        90 id--~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++  ++|+|+|... ..++.+.+.++|.+.+++|+.+++.+++.++++|.+.+.       .++||++||..+..+.+++
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~  151 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKV-------DKRVINISSGAAKNPYFGW  151 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCC-------CceEEEecchhhcCCCCCc
Confidence            22  8999999753 467888999999999999999999999999999976431       3789999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCC----ChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      ..|+++|+++++|++.++.|++ .+.||+|++|.||+++|+......    ......+.+....+.+++.+|+|+|+.++
T Consensus       152 ~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  231 (251)
T PRK06924        152 SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALR  231 (251)
T ss_pred             HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHH
Confidence            9999999999999999999975 256899999999999976532210    01011223344456788999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+++. .+++|+.+.+|
T Consensus       232 ~l~~~~-~~~~G~~~~v~  248 (251)
T PRK06924        232 NLLETE-DFPNGEVIDID  248 (251)
T ss_pred             HHHhcc-cCCCCCEeehh
Confidence            999874 89999999876

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=6.2e-36  Score=244.11  Aligned_cols=240  Identities=33%  Similarity=0.391  Sum_probs=210.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++.+|+++||||+++||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45689999999999999999999999999999999998888777777776677899999999999999999999988899


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++||++|.....++.+.+.++++..++.|+.+++.+++++.+++.+.+.        ++||++||..+..+......
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--------~~ii~~ss~~~~~~~~~~~~  153 (246)
T PRK05653         82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARY--------GRIVNISSVSGVTGNPGQTN  153 (246)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEECcHHhccCCCCCcH
Confidence            9999999999876677778889999999999999999999999999977654        78999999988888888899


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+.+|++++.++++++.++. +.|++++.|+||.+.++....  ......+......+.+++.+++|+++.+.+++++..
T Consensus       154 y~~sk~~~~~~~~~l~~~~~-~~~i~~~~i~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  230 (246)
T PRK05653        154 YSAAKAGVIGFTKALALELA-SRGITVNAVAPGFIDTDMTEG--LPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAA  230 (246)
T ss_pred             hHhHHHHHHHHHHHHHHHHh-hcCeEEEEEEeCCcCCcchhh--hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            99999999999999999997 889999999999998765422  123333444455677788999999999999999888


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .+++|+.+.+|
T Consensus       231 ~~~~g~~~~~~  241 (246)
T PRK05653        231 SYITGQVIPVN  241 (246)
T ss_pred             cCccCCEEEeC
Confidence            89999998876

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=3.8e-36  Score=246.22  Aligned_cols=229  Identities=24%  Similarity=0.228  Sum_probs=192.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++||||++|||+++++.|+++|++|++++|+.++++...+.+   +.++.++.+|+++.++++++++++.+.++++|+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999987766655544   346889999999999999999999999999999


Q ss_pred             EEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           93 LVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        93 li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +|||+|... ..++.+.+.++|++.+++|+.+++.+++.++++|.+++.        ++||++||..+..+.++...|+.
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~~  149 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH--------GHIINIGSTAGSWPYAGGNVYGA  149 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEECCcccCCCCCCCchhHH
Confidence            999999753 356677899999999999999999999999999987654        88999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-CC-hHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      +|+++++|++.++.|+. +.||+++.|+||.+.++++... .. +....   ........+.+|+|+|++++|+++....
T Consensus       150 sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dvA~~~~~l~~~~~~  225 (248)
T PRK10538        150 TKAFVRQFSLNLRTDLH-GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA---EKTYQNTVALTPEDVSEAVWWVATLPAH  225 (248)
T ss_pred             HHHHHHHHHHHHHHHhc-CCCcEEEEEeCCeecccccchhhccCcHHHH---HhhccccCCCCHHHHHHHHHHHhcCCCc
Confidence            99999999999999998 8999999999999986654322 11 11111   1111123457999999999999998777


Q ss_pred             ccccccc
Q 024976          250 HRDLIHL  256 (259)
Q Consensus       250 ~~tG~~i  256 (259)
                      +.+++..
T Consensus       226 ~~~~~~~  232 (248)
T PRK10538        226 VNINTLE  232 (248)
T ss_pred             ccchhhc
Confidence            7776654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.9e-36  Score=245.90  Aligned_cols=238  Identities=27%  Similarity=0.338  Sum_probs=196.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++++++++||||+++||++++++|+++|++|++..|+ .+......+.+...+.++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999998877654 44455555666666667889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++++|++|||||.....++.+.+.+.+++.+++|+.+.+.+++++.++|.+.          ++||++||..++.+.++.
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----------~~iv~~sS~~~~~~~~~~  151 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG----------GAIVNIASVAGIRPAYGL  151 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC----------cEEEEEcchhccCCCCCc
Confidence            9999999999998777777888889999999999999999999999998653          789999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ..|+++|+++++++++++.|++ + +|+++.++||++.|+.......  ............+.+++.+|+|+|+++++++
T Consensus       152 ~~Y~~sK~~~~~~~~~l~~~~~-~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~  229 (252)
T PRK06077        152 SIYGAMKAAVINLTKYLALELA-P-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAIL  229 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHh-c-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHh
Confidence            9999999999999999999997 6 8999999999998765322110  0001111122334567899999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      +.  ..++|+.+.+|
T Consensus       230 ~~--~~~~g~~~~i~  242 (252)
T PRK06077        230 KI--ESITGQVFVLD  242 (252)
T ss_pred             Cc--cccCCCeEEec
Confidence            64  35677777664

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=2.6e-36  Score=255.42  Aligned_cols=226  Identities=22%  Similarity=0.243  Sum_probs=183.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.    .+.++.+|++|.++++++++++.+.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            35689999999999999999999999999999999999887777666654    37889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------  161 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  161 (259)
                      +++|+||||||....  ..+.+.++|+..+++|+.+++.++++++|.|.+++.        ++||++||..+..      
T Consensus        98 ~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~--------~~iV~vSS~~~~~~~~~~~  167 (315)
T PRK06196         98 RRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAG--------ARVVALSSAGHRRSPIRWD  167 (315)
T ss_pred             CCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CeEEEECCHHhccCCCCcc
Confidence            999999999997532  234567889999999999999999999999987653        8899999976532      


Q ss_pred             ------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHH--Hhh-hhccCC-CCC
Q 024976          162 ------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS--KAT-DYMAAY-KFG  231 (259)
Q Consensus       162 ------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~--~~~-~~~~~~-~~~  231 (259)
                            +.+....|+.||++++.+++.++.+++ ++||+||+|+||++.|+... .........  ... ...+.. ++.
T Consensus       168 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~-~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  245 (315)
T PRK06196        168 DPHFTRGYDKWLAYGQSKTANALFAVHLDKLGK-DQGVRAFSVHPGGILTPLQR-HLPREEQVALGWVDEHGNPIDPGFK  245 (315)
T ss_pred             ccCccCCCChHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeeCCcccCCccc-cCChhhhhhhhhhhhhhhhhhhhcC
Confidence                  334567899999999999999999998 88999999999999987543 222221111  111 112222 577


Q ss_pred             CHHHHHHHHHHhcCccCC
Q 024976          232 EKWDIAMAALYLASDAAV  249 (259)
Q Consensus       232 ~~~dva~~~~~l~s~~~~  249 (259)
                      +|+|+|..++||++....
T Consensus       246 ~~~~~a~~~~~l~~~~~~  263 (315)
T PRK06196        246 TPAQGAATQVWAATSPQL  263 (315)
T ss_pred             CHhHHHHHHHHHhcCCcc
Confidence            999999999999975443

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-36  Score=248.04  Aligned_cols=216  Identities=21%  Similarity=0.221  Sum_probs=185.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.+|++|++++.++++++.+.+|++|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4799999999999999999999999999999999888777776665433 789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCC-CCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           92 ILVNAAAGNFLVPAE-DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        92 ~li~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      ++|||+|........ +.+.++|+..+++|+.+++.++++++|.|.+++.        ++||++||..+..+.+....|+
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~  152 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARR--------GTLVGIASVAGVRGLPGAGAYS  152 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCC--------CEEEEEechhhcCCCCCCcchH
Confidence            999999976544333 3788999999999999999999999999987764        8999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      +||++++.|+++++.|++ ++||++++|+||.++|+......            .+...+.+|+++++.++..+.....
T Consensus       153 asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~~~~  218 (257)
T PRK07024        153 ASKAAAIKYLESLRVELR-PAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIARGRR  218 (257)
T ss_pred             HHHHHHHHHHHHHHHHhh-ccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhCCCc
Confidence            999999999999999998 89999999999999976432110            1112345799999998888865443

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-35  Score=242.26  Aligned_cols=239  Identities=29%  Similarity=0.383  Sum_probs=205.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++.|+++||||+|+||++++++|+++|++|+++.|+ ....+...+.+...+.++.++.+|+++.++++++++++.+.++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            456899999999999999999999999998776554 4445556666666667799999999999999999999998889


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++||++|.....++.+.+.++++..+++|+.+++++++.+.+++.+.+.        +++|++||..+..+.+....
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~i~~SS~~~~~~~~~~~~  155 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRG--------GRIVNISSVAGLPGWPGRSN  155 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEECccccCCCCCCchH
Confidence            9999999999877777778899999999999999999999999999987654        78999999999988888999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+.+|++++++++.++.++. +.|++++.|+||.+.++........... .. ....|.+++.+++|+++.+.+++++..
T Consensus       156 y~~sK~~~~~~~~~~~~~~~-~~~i~~~~i~pg~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~dva~~~~~~~~~~~  232 (249)
T PRK12825        156 YAAAKAGLVGLTKALARELA-EYGITVNMVAPGDIDTDMKEATIEEARE-AK-DAETPLGRSGTPEDIARAVAFLCSDAS  232 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECCccCCccccccchhHH-hh-hccCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999997 8899999999999998765443322211 11 224577789999999999999999888


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .+++|+.+.+|
T Consensus       233 ~~~~g~~~~i~  243 (249)
T PRK12825        233 DYITGQVIEVT  243 (249)
T ss_pred             cCcCCCEEEeC
Confidence            89999999875

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-36  Score=243.03  Aligned_cols=231  Identities=27%  Similarity=0.280  Sum_probs=200.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.+++|+++||||+++||++++++|+++|++|++++|+.++..+..+++...  .+..+.+|++|.++++++++++.+.+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQF   80 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHh
Confidence            3478999999999999999999999999999999999887766666655443  36678899999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++||++|.....++.+.+++++++.+++|+.+++.+++++.+.+.+++.        ++||++||..++.+.+...
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~  152 (239)
T PRK12828         81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGG--------GRIVNIGAGAALKAGPGMG  152 (239)
T ss_pred             CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCC--------CEEEEECchHhccCCCCcc
Confidence            99999999999876667777889999999999999999999999999987654        8899999999988888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.+++.++.++. +.||+++.+.||.+.++........          .+..++.+++|+++++.+++++.
T Consensus       153 ~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~i~pg~v~~~~~~~~~~~----------~~~~~~~~~~dva~~~~~~l~~~  221 (239)
T PRK12828        153 AYAAAKAGVARLTEALAAELL-DRGITVNAVLPSIIDTPPNRADMPD----------ADFSRWVTPEQIAAVIAFLLSDE  221 (239)
T ss_pred             hhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCcchhhcCCc----------hhhhcCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999997 8899999999999987632222111          11234678999999999999988


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ..+++|+.+.+|
T Consensus       222 ~~~~~g~~~~~~  233 (239)
T PRK12828        222 AQAITGASIPVD  233 (239)
T ss_pred             cccccceEEEec
Confidence            889999999886

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.5e-36  Score=275.01  Aligned_cols=243  Identities=28%  Similarity=0.339  Sum_probs=212.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+.||+++||||+||||++++++|+++|++|++++|+.+.++...+++... .++.++.+|++++++++++++++.+.+
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999988887777776543 468899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|++|||||.....++.+.+.++|+..+++|+.+++.+++++.+.|++++.       +|+||++||..+..+.++..
T Consensus       497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-------~g~iV~vsS~~~~~~~~~~~  569 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL-------GGSIVFIASKNAVNPGPNFG  569 (681)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CcEEEEECCccccCCCCCcH
Confidence            99999999999888888888999999999999999999999999999987642       37899999999999888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccc--cCCcccCCC----------ChHHHHHHhhhhccCCCCCCHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKL----------APEEIRSKATDYMAAYKFGEKWD  235 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v--~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~d  235 (259)
                      .|+++|+++++++++++.|++ +.||+||.|+||.+  .|......+          .+++..+.+.+..+++++.+++|
T Consensus       570 ~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~D  648 (681)
T PRK08324        570 AYGAAKAAELHLVRQLALELG-PDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPED  648 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHH
Confidence            999999999999999999998 89999999999999  554332211          12222234555667788999999


Q ss_pred             HHHHHHHhcCccCCcccccccccC
Q 024976          236 IAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       236 va~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++++++++++...++||+.+.+|
T Consensus       649 vA~a~~~l~s~~~~~~tG~~i~vd  672 (681)
T PRK08324        649 VAEAVVFLASGLLSKTTGAIITVD  672 (681)
T ss_pred             HHHHHHHHhCccccCCcCCEEEEC
Confidence            999999999988889999999887

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=4.1e-36  Score=254.06  Aligned_cols=212  Identities=20%  Similarity=0.238  Sum_probs=174.3

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|++++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            5899999999999999999999999999999999999999988888653  3467889999995  23334444444444


Q ss_pred             --CccEEEECCCCCCC--CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-c-
Q 024976           89 --KLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-A-  162 (259)
Q Consensus        89 --~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~-  162 (259)
                        ++|++|||||....  .++.+.+++++++.+++|+.+++.++++++|.|.+++.        |+||++||..+.. + 
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~--------g~IV~iSS~a~~~~~~  201 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKK--------GAIINIGSGAAIVIPS  201 (320)
T ss_pred             CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC--------cEEEEEechhhccCCC
Confidence              46699999997643  46778899999999999999999999999999988764        8999999998864 3 


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      .+....|++||+++++|+++|+.|++ ++||+|++|+||+++|++.....          .  . ....+||++|+.++.
T Consensus       202 ~p~~~~Y~aSKaal~~~~~~L~~El~-~~gI~V~~v~PG~v~T~~~~~~~----------~--~-~~~~~p~~~A~~~~~  267 (320)
T PLN02780        202 DPLYAVYAATKAYIDQFSRCLYVEYK-KSGIDVQCQVPLYVATKMASIRR----------S--S-FLVPSSDGYARAALR  267 (320)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHHh-ccCeEEEEEeeCceecCcccccC----------C--C-CCCCCHHHHHHHHHH
Confidence            57789999999999999999999998 89999999999999987532100          0  0 013478888888888


Q ss_pred             hcCc
Q 024976          243 LASD  246 (259)
Q Consensus       243 l~s~  246 (259)
                      .+..
T Consensus       268 ~~~~  271 (320)
T PLN02780        268 WVGY  271 (320)
T ss_pred             HhCC
Confidence            7754

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-36  Score=248.76  Aligned_cols=222  Identities=22%  Similarity=0.235  Sum_probs=184.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-CC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g~   89 (259)
                      .+|+++||||+||||++++++|+++|++|++++|+.+.++.+.+    .  .+.++.+|++|.++++++++++.+.+ |+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E--GLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999776654432    1  47789999999999999999997776 68


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|++|||||....+++.+.+.++++..+++|+.+++.+++.++|.|.+++.        |+||++||..+..+.+....|
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~--------g~iv~isS~~~~~~~~~~~~Y  148 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQ--------GRIVQCSSILGLVPMKYRGAY  148 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCC--------CEEEEECChhhcCCCCccchH
Confidence            999999999887788888999999999999999999999999999988764        899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh-------------HHHH---HHhhh-hccCCCCCC
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-------------EEIR---SKATD-YMAAYKFGE  232 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-------------~~~~---~~~~~-~~~~~~~~~  232 (259)
                      ++||+++++|+++++.|+. ++||+|+.|+||+++|+........             +...   ..... ..+.....+
T Consensus       149 ~asK~a~~~~~~~l~~el~-~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (277)
T PRK05993        149 NASKFAIEGLSLTLRMELQ-GSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLG  227 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhh-hhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCC
Confidence            9999999999999999998 8999999999999998754321100             0000   00111 112223468


Q ss_pred             HHHHHHHHHHhcCcc
Q 024976          233 KWDIAMAALYLASDA  247 (259)
Q Consensus       233 ~~dva~~~~~l~s~~  247 (259)
                      ||++++.++..+...
T Consensus       228 ~~~va~~i~~a~~~~  242 (277)
T PRK05993        228 PEAVYAVLLHALTAP  242 (277)
T ss_pred             HHHHHHHHHHHHcCC
Confidence            999999999988643

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=244.84  Aligned_cols=242  Identities=29%  Similarity=0.383  Sum_probs=204.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||+++||++++++|+++|++|++++|+.+..+...++....  ++.++.+|++|+++++++++++.+.+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERF   84 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999887766665555432  57889999999999999999999999


Q ss_pred             CCccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +++|+|||++|.. ....+...+.++|++.+++|+.+++.+++++++.+.+.+.       +++|+++||..+..+.+..
T Consensus        85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~vv~~ss~~~~~~~~~~  157 (264)
T PRK12829         85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH-------GGVIIALSSVAGRLGYPGR  157 (264)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CeEEEEecccccccCCCCC
Confidence            9999999999987 5566677888999999999999999999999998876532       2678889998888888888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC---------hHHHHHHhhhhccCCCCCCHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      ..|+.+|++++.+++.++.++. ..+++++.|+||.+.|++......         ............|..++.+++|++
T Consensus       158 ~~y~~~K~a~~~~~~~l~~~~~-~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a  236 (264)
T PRK12829        158 TPYAASKWAVVGLVKSLAIELG-PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIA  236 (264)
T ss_pred             chhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHH
Confidence            8999999999999999999997 789999999999998765432211         112222334445667899999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++.+++++...+++|+.+.+|
T Consensus       237 ~~~~~l~~~~~~~~~g~~~~i~  258 (264)
T PRK12829        237 ATALFLASPAARYITGQAISVD  258 (264)
T ss_pred             HHHHHHcCccccCccCcEEEeC
Confidence            9999999887788999998876

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=244.87  Aligned_cols=221  Identities=21%  Similarity=0.279  Sum_probs=191.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++++++||||++|||++++++|+++|++|++++|+.+.++...+++ ..+.++.++.+|++|.++++++++.+.+ ++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~   79 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MG   79 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cC
Confidence            468999999999999999999999999999999999988888777777 4456789999999999999999998876 78


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++++|.+++.        ++||++||..+..+.++...
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~  151 (263)
T PRK09072         80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPS--------AMVVNVGSTFGSIGYPGYAS  151 (263)
T ss_pred             CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------CEEEEecChhhCcCCCCccH
Confidence            9999999999877777888899999999999999999999999999987654        88999999999988888999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      |+.+|+++.+++++++.|+. +.||+|+.|+||+++|+......      ..... ....++.+|+|+|+.+++++...
T Consensus       152 Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~-~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        152 YCASKFALRGFSEALRRELA-DTGVRVLYLAPRATRTAMNSEAV------QALNR-ALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccccchhhhc------ccccc-cccCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999998 88999999999999876432111      01111 11235779999999999999754

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-35  Score=240.55  Aligned_cols=222  Identities=26%  Similarity=0.344  Sum_probs=194.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++++++||||+++||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            44678999999999999999999999999999999999888777777776666678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||+|....+++.+.++++|++.+++|+.+++.+++++.+++.++..        +++|++||..+..+.++..
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~ss~~~~~~~~~~~  154 (239)
T PRK07666         83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQS--------GDIINISSTAGQKGAAVTS  154 (239)
T ss_pred             CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------cEEEEEcchhhccCCCCCc
Confidence            99999999999877777788899999999999999999999999999987654        8899999999999988889


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+.+|+++..+++.++.|+. +.||+++.|+||.+.|+.......+        ...+ .++.+++|+++.+..+++..
T Consensus       155 ~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~--------~~~~-~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        155 AYSASKFGVLGLTESLMQEVR-KHNIRVTALTPSTVATDMAVDLGLT--------DGNP-DKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCcccCcchhhcccc--------ccCC-CCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999998 8899999999999987654321110        1111 34678999999999988753

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=8.4e-36  Score=229.38  Aligned_cols=240  Identities=23%  Similarity=0.228  Sum_probs=210.6

Q ss_pred             CCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..|+||++||+|-.  +.|+..+|+.|.++|+++++...++ ++++-.+++.+.-....+++||+++.++++++|+++.+
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            46899999999987  8999999999999999999998876 56665555544323367899999999999999999999


Q ss_pred             HcCCccEEEECCCCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           86 HFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        86 ~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      .+|++|+|||+-++..    .+++.+.+.|.|...+++..++...+.|++.|.|...          |+|+.++=..+..
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~g----------gSiltLtYlgs~r  150 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNG----------GSILTLTYLGSER  150 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCC----------CcEEEEEecccee
Confidence            9999999999999765    3577889999999999999999999999999999873          8899998888888


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      ..|.+..-+.+|++|+.-+|.|+.+++ ++|||||+|+-|++.|-....--.-....+......|++|..++|||++..+
T Consensus       151 ~vPnYNvMGvAKAaLEasvRyLA~dlG-~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~  229 (259)
T COG0623         151 VVPNYNVMGVAKAALEASVRYLAADLG-KEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAA  229 (259)
T ss_pred             ecCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHH
Confidence            888888889999999999999999999 8999999999999986433222223566667788899999999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+|+-++-+||+.+++|
T Consensus       230 fLlSdLssgiTGei~yVD  247 (259)
T COG0623         230 FLLSDLSSGITGEIIYVD  247 (259)
T ss_pred             HHhcchhcccccceEEEc
Confidence            999999999999999998

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=4.7e-35  Score=239.48  Aligned_cols=238  Identities=30%  Similarity=0.344  Sum_probs=200.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..++++++||||+++||++++++|+++|++|++++|+ .+.++...+.+... +..+.++.+|+++++++.++++++.+.
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999986 44455555555443 345889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++++|++|||+|.....++.+.+.++++..+++|+.+++.+++++.+++.+..         +.+++++|..+..+.++.
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~  153 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR---------GAIVNITDIHAERPLKGY  153 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC---------eEEEEEeChhhcCCCCCc
Confidence            99999999999987777777788899999999999999999999999987642         788888888888888888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+.||++++.+++.++.++. + +|+++.++||++.++.....+ +...........+..++.+++|+++++.+++.+
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~-~-~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~  230 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELA-P-EVRVNAVAPGAILWPEDGNSF-DEEARQAILARTPLKRIGTPEDIAEAVRFLLAD  230 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHC-C-CCeEEEEEeccccCccccccC-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999985 4 699999999999987654333 333344444555667788999999999999875


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                       ..+++|+.+.+|
T Consensus       231 -~~~~~g~~~~i~  242 (249)
T PRK09135        231 -ASFITGQILAVD  242 (249)
T ss_pred             -cccccCcEEEEC
Confidence             567899988765

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.9e-35  Score=249.83  Aligned_cols=238  Identities=16%  Similarity=0.154  Sum_probs=185.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .+|+++||||++|||++++++|+++| ++|++++|+.++.++..+++...+.++.++.+|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 99999999988888777777544567888999999999999999999888899


Q ss_pred             ccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------
Q 024976           90 LDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------  162 (259)
Q Consensus        90 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------  162 (259)
                      +|++|||||+... .+..+.+.++|+..+++|+.+++.++++++|.|++++.+      .|+||++||..+..+      
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~------~g~IV~vsS~~~~~~~~~~~~  155 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNK------DKRLIIVGSITGNTNTLAGNV  155 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCC------CCeEEEEecCccccccCCCcC
Confidence            9999999997543 233467889999999999999999999999999875310      279999999876421      


Q ss_pred             ---------------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccc-cCCcccCCCCh
Q 024976          163 ---------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAP  214 (259)
Q Consensus       163 ---------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v-~t~~~~~~~~~  214 (259)
                                                 ..++.+|++||+|+..+++.+++++..+.||+|++|+||.+ .|++.......
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~  235 (314)
T TIGR01289       156 PPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPL  235 (314)
T ss_pred             CCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHH
Confidence                                       12456799999999999999999985246899999999999 46554322211


Q ss_pred             -HHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccc
Q 024976          215 -EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIH  255 (259)
Q Consensus       215 -~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~  255 (259)
                       ......+.. ...+.+.++++.++.+++++.+.....+|..
T Consensus       236 ~~~~~~~~~~-~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~  276 (314)
T TIGR01289       236 FRTLFPPFQK-YITKGYVSEEEAGERLAQVVSDPKLKKSGVY  276 (314)
T ss_pred             HHHHHHHHHH-HHhccccchhhhhhhhHHhhcCcccCCCcee
Confidence             011111111 1123356899999999998876433334543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-36  Score=241.43  Aligned_cols=222  Identities=24%  Similarity=0.331  Sum_probs=186.9

Q ss_pred             EEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 024976           16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN   95 (259)
Q Consensus        16 lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~   95 (259)
                      +||||++|||++++++|+++|++|++++|+.+.++...++++. +.++.++.+|+++++++++++++    .+++|++||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAE----AGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHh----cCCCCEEEE
Confidence            6999999999999999999999999999998777776666642 55688999999999999998875    378999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHHHH
Q 024976           96 AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA  175 (259)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  175 (259)
                      |+|....+++.+.+.+++++.+++|+.+++++++  .+.+.+          .|+||++||..++.+.+....|+++|++
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~----------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a  143 (230)
T PRK07041         76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP----------GGSLTFVSGFAAVRPSASGVLQGAINAA  143 (230)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC----------CeEEEEECchhhcCCCCcchHHHHHHHH
Confidence            9998777778888999999999999999999999  344432          2889999999999998999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccc
Q 024976          176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDL  253 (259)
Q Consensus       176 ~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG  253 (259)
                      +++|+|+++.|+. .  ||++.++||++.|+.......  ............|.++..+|+|+|+++++|+++  .+++|
T Consensus       144 ~~~~~~~la~e~~-~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G  218 (230)
T PRK07041        144 LEALARGLALELA-P--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTG  218 (230)
T ss_pred             HHHHHHHHHHHhh-C--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCC
Confidence            9999999999996 4  999999999999765432111  122233344556778889999999999999974  58999


Q ss_pred             cccccC
Q 024976          254 IHLLDD  259 (259)
Q Consensus       254 ~~i~~D  259 (259)
                      +.+.+|
T Consensus       219 ~~~~v~  224 (230)
T PRK07041        219 STVLVD  224 (230)
T ss_pred             cEEEeC
Confidence            998876

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-35  Score=242.29  Aligned_cols=229  Identities=22%  Similarity=0.291  Sum_probs=193.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ...+|+++||||+++||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++++++.++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35678999999999999999999999999999999988777777776766566788999999999999999999998899


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++|||||.....++.+.+++++++.+++|+.+++++++++++.|.++..        ++||++||..++.+.+....
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~--------g~iv~isS~~~~~~~~~~~~  158 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRR--------GDLIFVGSDVALRQRPHMGA  158 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------ceEEEECChHhcCCCCCcch
Confidence            9999999999877677778899999999999999999999999999987654        88999999999888888889


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHH---HHhh--hhccCCCCCCHHHHHHHHHHh
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR---SKAT--DYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~dva~~~~~l  243 (259)
                      |+++|++++.+++.++.++. ..||++++|+||+++|+...... +....   ....  ......++.+++|++++++++
T Consensus       159 Y~~sK~a~~~l~~~~~~~~~-~~gi~v~~v~pG~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~  236 (274)
T PRK07775        159 YGAAKAGLEAMVTNLQMELE-GTGVRASIVHPGPTLTGMGWSLP-AEVIGPMLEDWAKWGQARHDYFLRASDLARAITFV  236 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCCcccCcccccCC-hhhhhHHHHHHHHhcccccccccCHHHHHHHHHHH
Confidence            99999999999999999997 88999999999999876543221 11111   1111  112235688999999999999


Q ss_pred             cCcc
Q 024976          244 ASDA  247 (259)
Q Consensus       244 ~s~~  247 (259)
                      ++..
T Consensus       237 ~~~~  240 (274)
T PRK07775        237 AETP  240 (274)
T ss_pred             hcCC
Confidence            9753

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-36  Score=244.64  Aligned_cols=229  Identities=21%  Similarity=0.212  Sum_probs=184.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+ ..+...++++..+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999988753 4556666666556678899999999999999999999989


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-----cc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TA  162 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----~~  162 (259)
                      +.+|++|||||.....   +   .++...+++|+.+++++++++.++|.+.          ++||++||..+.     .+
T Consensus        83 ~~~d~vi~~ag~~~~~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~~----------~~iv~isS~~~~~~~~~~~  146 (248)
T PRK07806         83 GGLDALVLNASGGMES---G---MDEDYAMRLNRDAQRNLARAALPLMPAG----------SRVVFVTSHQAHFIPTVKT  146 (248)
T ss_pred             CCCcEEEECCCCCCCC---C---CCcceeeEeeeHHHHHHHHHHHhhccCC----------ceEEEEeCchhhcCccccC
Confidence            9999999999864221   1   1245788999999999999999988542          789999996543     23


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC---CCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---KLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      .+.+..|++||++++.++++++.|++ ..||+||.|+||.+.++....   ...+....   ....|.+++.+|+|++++
T Consensus       147 ~~~~~~Y~~sK~a~e~~~~~l~~~~~-~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~  222 (248)
T PRK07806        147 MPEYEPVARSKRAGEDALRALRPELA-EKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE---ARREAAGKLYTVSEFAAE  222 (248)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHHhh-ccCeEEEEeCCccccCchhhhhhccCCHHHHH---HHHhhhcccCCHHHHHHH
Confidence            34467899999999999999999998 889999999999998654321   11222111   123567889999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +.++++  +.+++|+.+.+|
T Consensus       223 ~~~l~~--~~~~~g~~~~i~  240 (248)
T PRK07806        223 VARAVT--APVPSGHIEYVG  240 (248)
T ss_pred             HHHHhh--ccccCccEEEec
Confidence            999997  467899988775

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-35  Score=249.43  Aligned_cols=232  Identities=20%  Similarity=0.211  Sum_probs=184.2

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      ..+.++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|.+++++++++
T Consensus         7 ~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~   86 (313)
T PRK05854          7 ITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQ   86 (313)
T ss_pred             ccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHH
Confidence            3446789999999999999999999999999999999999998888888887643  34688999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +.+.++++|+||||||.... +..+.+.++|+..+++|+.+++.+++.++|.|.+. .        ++||++||..+..+
T Consensus        87 ~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~--------~riv~vsS~~~~~~  156 (313)
T PRK05854         87 LRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-R--------ARVTSQSSIAARRG  156 (313)
T ss_pred             HHHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-C--------CCeEEEechhhcCC
Confidence            99999999999999997643 33456788999999999999999999999999764 2        78999999876543


Q ss_pred             ------------CccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCCC--h--HHHHHHhhhhc
Q 024976          163 ------------TWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLA--P--EEIRSKATDYM  225 (259)
Q Consensus       163 ------------~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~~--~--~~~~~~~~~~~  225 (259)
                                  .++...|+.||+|+..|++.|+.++. ...||+||+++||.+.|+.......  .  ......+....
T Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  236 (313)
T PRK05854        157 AINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSL  236 (313)
T ss_pred             CcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHH
Confidence                        24567899999999999999998643 2578999999999999775432110  0  11111111111


Q ss_pred             -cCC-CCCCHHHHHHHHHHhcCc
Q 024976          226 -AAY-KFGEKWDIAMAALYLASD  246 (259)
Q Consensus       226 -~~~-~~~~~~dva~~~~~l~s~  246 (259)
                       ..+ .+.++++-+...++++..
T Consensus       237 ~~~~~~~~~~~~ga~~~l~~a~~  259 (313)
T PRK05854        237 SARGFLVGTVESAILPALYAATS  259 (313)
T ss_pred             hhcccccCCHHHHHHHhhheeeC
Confidence             011 134788999999988754

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=246.48  Aligned_cols=220  Identities=26%  Similarity=0.292  Sum_probs=186.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++++++||||+||||++++++|+++|++|++++|+.+..+.        ..++.++++|++|+++++++++.+.+.+|++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            57899999999999999999999999999999998654322        2357899999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |+||||||....+++.+.+.+++++.+++|+.+++.++++++|+|++++.        ++||++||..+..+.+....|+
T Consensus        75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~  146 (270)
T PRK06179         75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGS--------GRIINISSVLGFLPAPYMALYA  146 (270)
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------ceEEEECCccccCCCCCccHHH
Confidence            99999999887788888999999999999999999999999999988764        8999999999999998899999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH-------HHHHHhhh--hccCCCCCCHHHHHHHHH
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-------EIRSKATD--YMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-------~~~~~~~~--~~~~~~~~~~~dva~~~~  241 (259)
                      ++|++++.++++++.|++ ++||+++.|+||++.|+.........       ........  ..+..+..+|+++++.++
T Consensus       147 ~sK~a~~~~~~~l~~el~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  225 (270)
T PRK06179        147 ASKHAVEGYSESLDHEVR-QFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVV  225 (270)
T ss_pred             HHHHHHHHHHHHHHHHHh-hhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHH
Confidence            999999999999999998 89999999999999976543322110       00111111  123456678999999999


Q ss_pred             HhcCcc
Q 024976          242 YLASDA  247 (259)
Q Consensus       242 ~l~s~~  247 (259)
                      ++++..
T Consensus       226 ~~~~~~  231 (270)
T PRK06179        226 KAALGP  231 (270)
T ss_pred             HHHcCC
Confidence            998754

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-35  Score=244.52  Aligned_cols=228  Identities=23%  Similarity=0.269  Sum_probs=193.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.+..+...+++...  +.++.++.+|++|++++++ ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            5789999999999999999999999999999999988777776666543  3468999999999999999 999999899


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++|||+|....+.+.+.+.+++++.+++|+.+++.+++.++|.|++.+.        ++||++||..+..+.++...
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~vsS~~~~~~~~~~~~  152 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS--------GKIINISSISGRVGFPGLSP  152 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEECcccccCCCCCCch
Confidence            9999999999877777788899999999999999999999999999987654        88999999999988889999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-----------hHHHHHHhhhh--ccCCCCCCHHH
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----------PEEIRSKATDY--MAAYKFGEKWD  235 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~~~d  235 (259)
                      |+++|+++++|+++++.|+. ++||+++.++||.++|+.......           ...........  .+..++.+++|
T Consensus       153 Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  231 (280)
T PRK06914        153 YVSSKYALEGFSESLRLELK-PFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPID  231 (280)
T ss_pred             hHHhHHHHHHHHHHHHHHhh-hhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHH
Confidence            99999999999999999998 889999999999999875432211           01111111111  23567889999


Q ss_pred             HHHHHHHhcCccC
Q 024976          236 IAMAALYLASDAA  248 (259)
Q Consensus       236 va~~~~~l~s~~~  248 (259)
                      +|+++++++++..
T Consensus       232 va~~~~~~~~~~~  244 (280)
T PRK06914        232 VANLIVEIAESKR  244 (280)
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999998653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=9.3e-35  Score=238.63  Aligned_cols=239  Identities=32%  Similarity=0.417  Sum_probs=203.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++||||+++||++++++|+++|++|++++|+.+..+.+.+++...+.++.++.+|++|.++++++++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999999999999998888888777766566789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ++|||+|........+.+++++++.++.|+.+++.+++++++.|++.+.        +++|++||..+..+.+.+..|+.
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--------~~~v~~ss~~~~~~~~~~~~y~~  152 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGW--------GRIINIASAHGLVASPFKSAYVA  152 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------eEEEEEcchhhcCCCCCCchhHH
Confidence            9999999876666677788999999999999999999999999987654        78999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC---------hHHH-HHHhhhhccCCCCCCHHHHHHHHH
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEI-RSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +|++++.++++++.++. +.||+++.++||.+.++.....+.         .... ...+....+...+.+++|++++++
T Consensus       153 sk~a~~~~~~~~~~~~~-~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  231 (255)
T TIGR01963       153 AKHGLIGLTKVLALEVA-AHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETAL  231 (255)
T ss_pred             HHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHH
Confidence            99999999999999997 789999999999998764322111         0111 112223334556889999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      +++++....++|+.+.+|
T Consensus       232 ~~~~~~~~~~~g~~~~~~  249 (255)
T TIGR01963       232 FLASDAAAGITGQAIVLD  249 (255)
T ss_pred             HHcCccccCccceEEEEc
Confidence            999887677899988876

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-35  Score=240.59  Aligned_cols=215  Identities=19%  Similarity=0.177  Sum_probs=179.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhh-HHHHHHHHHhcCC-CeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTV-LRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~-~~~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+|+++||||++|||++++++|+++| ++|++++|+.+. +++..+++...+. +++++.+|++|.++++++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            47899999999999999999999995 899999999876 7888888866543 789999999999999999999886 5


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|++|||+|......-...+.++..+.+++|+.+++.+++.++|.|.+++.        ++||++||..+..+.+...
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~--------~~iv~isS~~g~~~~~~~~  157 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF--------GQIIAMSSVAGERVRRSNF  157 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC--------ceEEEEechhhcCCCCCCc
Confidence            89999999999754322122345566788999999999999999999998764        8999999998887877888


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+++.+|+++++.|+. ++||+|+.|+||+++|+......             +.....+|+|+|+.++..+.+.
T Consensus       158 ~Y~~sKaa~~~~~~~l~~el~-~~~i~v~~v~Pg~v~t~~~~~~~-------------~~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        158 VYGSTKAGLDGFYLGLGEALR-EYGVRVLVVRPGQVRTRMSAHAK-------------EAPLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHHh-hcCCEEEEEeeCceecchhccCC-------------CCCCCCCHHHHHHHHHHHHHcC
Confidence            999999999999999999998 89999999999999976442211             0112458999999999988654


Q ss_pred             C
Q 024976          248 A  248 (259)
Q Consensus       248 ~  248 (259)
                      .
T Consensus       224 ~  224 (253)
T PRK07904        224 K  224 (253)
T ss_pred             C
Confidence            3

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=1.8e-35  Score=240.26  Aligned_cols=216  Identities=19%  Similarity=0.169  Sum_probs=177.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      |+++||||++|||++++++|+++|  +.|++..|+...  .    .  ...++.++++|+++.++++++.    +.++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~----~--~~~~~~~~~~Dls~~~~~~~~~----~~~~~i   68 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D----F--QHDNVQWHALDVTDEAEIKQLS----EQFTQL   68 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c----c--ccCceEEEEecCCCHHHHHHHH----HhcCCC
Confidence            479999999999999999999986  456666665432  1    1  1346889999999999988854    445899


Q ss_pred             cEEEECCCCCCC------CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---
Q 024976           91 DILVNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---  161 (259)
Q Consensus        91 d~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  161 (259)
                      |++|||+|....      .++.+.+.+.|++.+++|+.+++.+++.++|.|.+++.        ++++++||..+..   
T Consensus        69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~--------~~i~~iss~~~~~~~~  140 (235)
T PRK09009         69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSES--------AKFAVISAKVGSISDN  140 (235)
T ss_pred             CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCC--------ceEEEEeecccccccC
Confidence            999999997642      35667888999999999999999999999999976643        7899998866533   


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTD--YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~--~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      +.+++..|+++|+++++|+++|+.|+. +  .||+||.|+||+++|++...          .....|.+++.+|||+++.
T Consensus       141 ~~~~~~~Y~asK~a~~~~~~~la~e~~-~~~~~i~v~~v~PG~v~t~~~~~----------~~~~~~~~~~~~~~~~a~~  209 (235)
T PRK09009        141 RLGGWYSYRASKAALNMFLKTLSIEWQ-RSLKHGVVLALHPGTTDTALSKP----------FQQNVPKGKLFTPEYVAQC  209 (235)
T ss_pred             CCCCcchhhhhHHHHHHHHHHHHHHhh-cccCCeEEEEEcccceecCCCcc----------hhhccccCCCCCHHHHHHH
Confidence            345677999999999999999999997 4  69999999999999876432          1123466778899999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++++++.+.+++|+.+.+|
T Consensus       210 ~~~l~~~~~~~~~g~~~~~~  229 (235)
T PRK09009        210 LLGIIANATPAQSGSFLAYD  229 (235)
T ss_pred             HHHHHHcCChhhCCcEEeeC
Confidence            99999999999999999776

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-35  Score=240.33  Aligned_cols=219  Identities=26%  Similarity=0.214  Sum_probs=187.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH-cCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~-~g~id   91 (259)
                      |+++||||++|||++++++|+++|++|++++|+.+.++++.+.+.  +.++.++++|+++.+++.++++.+.+. ++++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            689999999999999999999999999999999887777766654  456899999999999999999988776 78999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +||||||....+.+.+.+.+++++.+++|+.+++.+++++.++|++++.        ++||++||..+..+.+....|+.
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~~  151 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPG--------ARVINTSSASAIYGQPGLAVYSA  151 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------CEEEEeCchhhCcCCCCchhhHH
Confidence            9999999887778888899999999999999999999999999987654        89999999999999889999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ||+++++|+++++.++. +.||++++|+||++.|++..... .. .......  ..+...+|+|+++++++++..
T Consensus       152 sKaa~~~~~~~l~~~~~-~~~i~v~~i~pg~~~t~~~~~~~-~~-~~~~~~~--~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        152 TKFAVRGLTEALDLEWR-RHGIRVADVMPLFVDTAMLDGTS-NE-VDAGSTK--RLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHHHHHHHHhc-ccCcEEEEEecCCcCCccccccc-ch-hhhhhHh--hccCCCCHHHHHHHHHHHHhC
Confidence            99999999999999998 88999999999999976554311 11 1111111  122346899999999999854

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-35  Score=224.31  Aligned_cols=186  Identities=24%  Similarity=0.253  Sum_probs=170.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.+.|.|+|||||++|||++++++|.+.|.+|++++|+++++++.+++.    +.++...||+.|.++.+++++.+++.+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC
Confidence            3478999999999999999999999999999999999999888877664    458889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCC--CCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           88 GKLDILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      +.++++|||||+...-.|.  +...++.+..+.+|+.++++++++++|++.+++.        +.||++||..+..|...
T Consensus        77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~--------a~IInVSSGLafvPm~~  148 (245)
T COG3967          77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPE--------ATIINVSSGLAFVPMAS  148 (245)
T ss_pred             CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCC--------ceEEEeccccccCcccc
Confidence            9999999999986554444  3455778899999999999999999999999876        88999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  206 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~  206 (259)
                      .+.||++|+|++.++.+|+.+++ ..+|+|--+.|-.|+|+
T Consensus       149 ~PvYcaTKAaiHsyt~aLR~Qlk-~t~veVIE~~PP~V~t~  188 (245)
T COG3967         149 TPVYCATKAAIHSYTLALREQLK-DTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cccchhhHHHHHHHHHHHHHHhh-hcceEEEEecCCceecC
Confidence            99999999999999999999997 88999999999999986

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-36  Score=224.17  Aligned_cols=243  Identities=25%  Similarity=0.314  Sum_probs=210.6

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++.+|-+.+||||.||+|++.++.|+++|+.|++.|-..++.....+++   +.++.|...|++++++++..+...+.+
T Consensus         4 ~rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    4 LRSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hhhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhh
Confidence            46688999999999999999999999999999999999888877777776   668999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCC-C-----CCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           87 FGKLDILVNAAAGNFL-V-----PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        87 ~g~id~li~~ag~~~~-~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      ||++|.++||||+... +     .-...+.|++++.+++|+.|+|+.++.-.-.|-++..++  ..++|.||++.|.+++
T Consensus        81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq--~gqrgviintasvaaf  158 (260)
T KOG1199|consen   81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQ--NGQRGVIINTASVAAF  158 (260)
T ss_pred             ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCC--CCcceEEEeeceeeee
Confidence            9999999999996421 2     123467899999999999999999999998887653322  2336999999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCC-CCCCHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMA  239 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~  239 (259)
                      .+..++.+|++||.++.+++--++++++ ..|||++.|.||..+||... . .|+....-+...+|.. |++.|.|.+..
T Consensus       159 dgq~gqaaysaskgaivgmtlpiardla-~~gir~~tiapglf~tplls-s-lpekv~~fla~~ipfpsrlg~p~eyahl  235 (260)
T KOG1199|consen  159 DGQTGQAAYSASKGAIVGMTLPIARDLA-GDGIRFNTIAPGLFDTPLLS-S-LPEKVKSFLAQLIPFPSRLGHPHEYAHL  235 (260)
T ss_pred             cCccchhhhhcccCceEeeechhhhhcc-cCceEEEeecccccCChhhh-h-hhHHHHHHHHHhCCCchhcCChHHHHHH
Confidence            9999999999999999999999999998 99999999999999976543 2 3555666667777764 89999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +-.+.  +..|+||+.|++|
T Consensus       236 vqaii--enp~lngevir~d  253 (260)
T KOG1199|consen  236 VQAII--ENPYLNGEVIRFD  253 (260)
T ss_pred             HHHHH--hCcccCCeEEEec
Confidence            88888  6789999999987

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=238.57  Aligned_cols=226  Identities=27%  Similarity=0.347  Sum_probs=192.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++++||||+++||+++++.|+++|++|++++|+.+..+...+++...+.++.++.+|++|++++.++++++.+.++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999998887877777776677889999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCC-CHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           92 ILVNAAAGNFLVPAEDL-SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      ++|||+|.....++.+. +.+++++.+++|+.+++.+++.+.++|.++.         ++||++||..++.+.++...|+
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---------~~iv~~sS~~~~~~~~~~~~Y~  151 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR---------GQIVVVSSLAGLTGVPTRSGYA  151 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---------CEEEEEecccccCCCCCccHHH
Confidence            99999998777777777 8999999999999999999999999987642         7899999999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      ++|+++++++++++.++. +.||+++.|.||.+.|++........... .........++.+|+|+++++.++++...
T Consensus       152 ~sK~~~~~~~~~l~~~~~-~~~i~~~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~i~~~~~~~~  227 (263)
T PRK06181        152 ASKHALHGFFDSLRIELA-DDGVAVTVVCPGFVATDIRKRALDGDGKP-LGKSPMQESKIMSAEECAEAILPAIARRK  227 (263)
T ss_pred             HHHHHHHHHHHHHHHHhh-hcCceEEEEecCccccCcchhhccccccc-cccccccccCCCCHHHHHHHHHHHhhCCC
Confidence            999999999999999998 88999999999999876543322111100 00011112368899999999999997543

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=4e-34  Score=232.63  Aligned_cols=234  Identities=33%  Similarity=0.413  Sum_probs=201.7

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      ++|||++++||++++++|+++|++|++++|+. +.++...+.+...+.++.++.+|++|+++++++++++.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 45556666666666678999999999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK  173 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  173 (259)
                      ||++|.....++.+.+.+++++.+++|+.+++.+.+++.+++.+.+.        ++++++||..+..+.+....|+.+|
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~v~~sS~~~~~g~~~~~~y~~~k  152 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRS--------GRIINISSVVGLMGNAGQANYAASK  152 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------eEEEEECCccccCCCCCCchhHHHH
Confidence            99999876666777888999999999999999999999999876543        7899999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccc
Q 024976          174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDL  253 (259)
Q Consensus       174 ~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG  253 (259)
                      ++++.+++.++.++. ..|++++.++||.+.++.. ... +...........+..++.+++|+++.+++++++...+++|
T Consensus       153 ~a~~~~~~~l~~~~~-~~g~~~~~i~pg~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g  229 (239)
T TIGR01830       153 AGVIGFTKSLAKELA-SRNITVNAVAPGFIDTDMT-DKL-SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITG  229 (239)
T ss_pred             HHHHHHHHHHHHHHh-hcCeEEEEEEECCCCChhh-hhc-ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCC
Confidence            999999999999998 8899999999999986532 222 2333344455667788999999999999999888889999


Q ss_pred             cccccC
Q 024976          254 IHLLDD  259 (259)
Q Consensus       254 ~~i~~D  259 (259)
                      +.+.+|
T Consensus       230 ~~~~~~  235 (239)
T TIGR01830       230 QVIHVD  235 (239)
T ss_pred             CEEEeC
Confidence            987765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-34  Score=243.16  Aligned_cols=236  Identities=19%  Similarity=0.173  Sum_probs=183.5

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++|.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988777776666532  4568899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---  161 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  161 (259)
                      +.++++|+||||||.....  .+.+.++++..+++|+.+++.+++.+++.|++.+.        ++||++||..+..   
T Consensus        91 ~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~--------~~iV~vSS~~~~~~~~  160 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPG--------SRVVTVSSGGHRIRAA  160 (306)
T ss_pred             hhCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCC--------CEEEEECCHHHhccCC
Confidence            9999999999999975432  34667889999999999999999999999987653        7999999986543   


Q ss_pred             ----------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE--ecccccCCcccCCCChHHHHHHhhhhccCCC
Q 024976          162 ----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI--APGPIKDTAGVSKLAPEEIRSKATDYMAAYK  229 (259)
Q Consensus       162 ----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i--~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  229 (259)
                                +.++...|+.||++++.|++.++.+++ +.|++++++  +||++.|++.. ..+. .....+....+. .
T Consensus       161 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~-~~~i~v~~v~~~PG~v~T~~~~-~~~~-~~~~~~~~~~~~-~  236 (306)
T PRK06197        161 IHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLA-AAGATTIAVAAHPGVSNTELAR-NLPR-ALRPVATVLAPL-L  236 (306)
T ss_pred             CCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh-cCCCCeEEEEeCCCcccCcccc-cCcH-HHHHHHHHHHhh-h
Confidence                      234567899999999999999999998 778877665  69999977543 2221 122111111121 1


Q ss_pred             CCCHHHHHHHHHHhcCccCCcccccccc
Q 024976          230 FGEKWDIAMAALYLASDAAVHRDLIHLL  257 (259)
Q Consensus       230 ~~~~~dva~~~~~l~s~~~~~~tG~~i~  257 (259)
                      ..++++-+..+++++.+ ..+.+|..+.
T Consensus       237 ~~~~~~g~~~~~~~~~~-~~~~~g~~~~  263 (306)
T PRK06197        237 AQSPEMGALPTLRAATD-PAVRGGQYYG  263 (306)
T ss_pred             cCCHHHHHHHHHHHhcC-CCcCCCeEEc
Confidence            23567667666766654 3445666543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=4.7e-34  Score=234.09  Aligned_cols=238  Identities=33%  Similarity=0.423  Sum_probs=193.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh--HHHHHHHHHhcC-CCeEEEEcCCCC-HHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV--LRSAVAALHSLG-IPAIGLEGDVRK-REDAVRVVESTI   84 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~--~~~~~~~~~~~~-~~v~~~~~Dl~~-~~~~~~~~~~~~   84 (259)
                      ++.+|+++||||++|||+++++.|+++|++|+++.++.+.  .+...+.....+ ..+.+..+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999998888877654  333333333122 357888999998 999999999999


Q ss_pred             HHcCCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           85 NHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      +.+|++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++.|.+.++           +||++||..+. +.
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----------~Iv~isS~~~~-~~  149 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-----------RIVNISSVAGL-GG  149 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-----------eEEEECCchhc-CC
Confidence            999999999999998877 488899999999999999999999999888888732           59999999999 77


Q ss_pred             cc-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHH-HHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          164 WY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE-IRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       164 ~~-~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +. +..|++||+|+.+|++.++.|+. +.||++|.|+||.+.|+.......... .........+..|...|++++..+.
T Consensus       150 ~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (251)
T COG1028         150 PPGQAAYAASKAALIGLTKALALELA-PRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVA  228 (251)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            77 49999999999999999999998 899999999999998765543322210 0111111115558889999999999


Q ss_pred             HhcCcc-CCcccccccccC
Q 024976          242 YLASDA-AVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~-~~~~tG~~i~~D  259 (259)
                      |+.+.. ..+++|+.+.+|
T Consensus       229 ~~~~~~~~~~~~g~~~~~~  247 (251)
T COG1028         229 FLASDEAASYITGQTLPVD  247 (251)
T ss_pred             HHcCcchhccccCCEEEeC
Confidence            998774 778888876543

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-34  Score=232.83  Aligned_cols=214  Identities=21%  Similarity=0.226  Sum_probs=186.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999988888777776543  457899999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-chh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIH  168 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~  168 (259)
                      +|++|||||+....++.+.+.+.+++.+++|+.+++.+++++++.|++.+.        ++||++||..+..+.+. ...
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~~  153 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGS--------GHLVLISSVSAVRGLPGVKAA  153 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CeEEEEeccccccCCCCCccc
Confidence            999999999887777778888999999999999999999999999987654        78999999988877764 688


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      |+.||++++.+++.++.++. ..||+++.|+||+++|++.....             +.....+++|.++.++..+...
T Consensus       154 Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~~~~-------------~~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        154 YAASKAGVASLGEGLRAELA-KTPIKVSTIEPGYIRSEMNAKAK-------------STPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcCcchhhhccc-------------cCCccCCHHHHHHHHHHHHhcC
Confidence            99999999999999999998 88999999999999876432211             0123568999999988877654

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-34  Score=234.25  Aligned_cols=231  Identities=19%  Similarity=0.205  Sum_probs=188.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH-HHHHc---C
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES-TINHF---G   88 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~~~~~---g   88 (259)
                      ++++||||+||||++++++|+++|++|++++|+.+..  .   ....+.++.++.+|+++.+++++++++ +.+.+   +
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            3799999999999999999999999999999886531  1   122345688999999999999998877 55544   4


Q ss_pred             CccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           89 KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        89 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ++|++|||+|.... .++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.        ++||++||..+..+.+++.
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~  148 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAE--------RRILHISSGAARNAYAGWS  148 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCC--------CEEEEEeChhhcCCCCCch
Confidence            79999999997653 56778899999999999999999999999999987654        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC--CCh--HHHHHHhhhhccCCCCCCHHHHHH-HHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAP--EEIRSKATDYMAAYKFGEKWDIAM-AALY  242 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~dva~-~~~~  242 (259)
                      .|+++|++++++++.++.+ . ..||+++.|+||+++|+.....  ...  ......+....+.+++.+|+|+|+ .+.+
T Consensus       149 ~Y~~sK~a~~~~~~~~~~~-~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~  226 (243)
T PRK07023        149 VYCATKAALDHHARAVALD-A-NRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAY  226 (243)
T ss_pred             HHHHHHHHHHHHHHHHHhc-C-CCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHH
Confidence            9999999999999999999 6 7899999999999997653211  000  011223445566788999999999 6778


Q ss_pred             hcCccCCccccccccc
Q 024976          243 LASDAAVHRDLIHLLD  258 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~  258 (259)
                      |+++.....+..++.+
T Consensus       227 l~~~~~~~~~~~~~~~  242 (243)
T PRK07023        227 LLSDDFGSTPTADIRN  242 (243)
T ss_pred             HhccccCCCCeeeccC
Confidence            8888877777666643

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.2e-33  Score=240.01  Aligned_cols=242  Identities=17%  Similarity=0.152  Sum_probs=184.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.+.+|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            44678999999999999999999999999999999999888888877775445578899999999999999999988777


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----
Q 024976           88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----  161 (259)
Q Consensus        88 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  161 (259)
                      +++|+||||||+... ....+.+.++|+..+++|+.+++.++++++|.|++++..      .++||++||.....     
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~------~~riV~vsS~~~~~~~~~~  155 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAP------DPRLVILGTVTANPKELGG  155 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC------CceEEEEcccccCccccCC
Confidence            899999999997543 233467889999999999999999999999999876420      26899999965421     


Q ss_pred             ------------------------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC
Q 024976          162 ------------------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK  211 (259)
Q Consensus       162 ------------------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~  211 (259)
                                                    +..+...|+.||.+...+++.+++++....||+|++++||.|.++.+...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  235 (322)
T PRK07453        156 KIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN  235 (322)
T ss_pred             ccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence                                          11234679999999999999999998525799999999999953333222


Q ss_pred             CCh--HHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCccccccc
Q 024976          212 LAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHL  256 (259)
Q Consensus       212 ~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i  256 (259)
                      ...  ......+.. .......++++-++.+++++.+.....+|..+
T Consensus       236 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~  281 (322)
T PRK07453        236 TPPLFQKLFPWFQK-NITGGYVSQELAGERVAQVVADPEFAQSGVHW  281 (322)
T ss_pred             CCHHHHHHHHHHHH-HHhhceecHHHHhhHHHHhhcCcccCCCCcee
Confidence            221  111111111 11122457788888888877654433466543

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-34  Score=227.41  Aligned_cols=197  Identities=18%  Similarity=0.249  Sum_probs=170.5

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||++|||++++++|+++ ++|++++|+..                 .+++|+++++++++++++    ++++|++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id~l   59 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----VGKVDAV   59 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----cCCCCEE
Confidence            7999999999999999999999 99999998753                 368999999999998875    4789999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK  173 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  173 (259)
                      |||+|.....++.+.++++|++.+++|+.+++++++++.|+|.+.          |+|+++||..+..+.+.+..|+++|
T Consensus        60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------g~iv~iss~~~~~~~~~~~~Y~~sK  129 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG----------GSFTLTSGILSDEPIPGGASAATVN  129 (199)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CeEEEEcccccCCCCCCchHHHHHH
Confidence            999998777778888999999999999999999999999999753          7899999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccc
Q 024976          174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDL  253 (259)
Q Consensus       174 ~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG  253 (259)
                      +++++|+++++.|+  ++||+||+|+||++.|++..           ..+..+..+..+|+|+|+.+.++++.   ..+|
T Consensus       130 ~a~~~~~~~la~e~--~~gi~v~~i~Pg~v~t~~~~-----------~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~g  193 (199)
T PRK07578        130 GALEGFVKAAALEL--PRGIRINVVSPTVLTESLEK-----------YGPFFPGFEPVPAARVALAYVRSVEG---AQTG  193 (199)
T ss_pred             HHHHHHHHHHHHHc--cCCeEEEEEcCCcccCchhh-----------hhhcCCCCCCCCHHHHHHHHHHHhcc---ceee
Confidence            99999999999998  56899999999999865311           11123444577999999999999963   5899


Q ss_pred             ccccc
Q 024976          254 IHLLD  258 (259)
Q Consensus       254 ~~i~~  258 (259)
                      +.+.+
T Consensus       194 ~~~~~  198 (199)
T PRK07578        194 EVYKV  198 (199)
T ss_pred             EEecc
Confidence            87754

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-33  Score=227.44  Aligned_cols=223  Identities=32%  Similarity=0.431  Sum_probs=191.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+.+++++||||+|+||++++++|+++|++|++++|+.+.++...+++... .++.++.+|+++.+++.++++++.+.++
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFG   81 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            366899999999999999999999999999999999988887777777543 5688999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++||++|....+++.+.+.+++++.+++|+.+++.+++++++.|.+ ..        ++||++||..+..+......
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~--------~~iv~~ss~~~~~~~~~~~~  152 (237)
T PRK07326         82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-GG--------GYIINISSLAGTNFFAGGAA  152 (237)
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-CC--------eEEEEECChhhccCCCCCch
Confidence            9999999999877777888899999999999999999999999999843 32        88999999988888888889


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+.+|++++++++.++.|+. ..|++++.|+||++.|+..... ..+.          .....+++|+++.++++++...
T Consensus       153 y~~sk~a~~~~~~~~~~~~~-~~gi~v~~v~pg~~~t~~~~~~-~~~~----------~~~~~~~~d~a~~~~~~l~~~~  220 (237)
T PRK07326        153 YNASKFGLVGFSEAAMLDLR-QYGIKVSTIMPGSVATHFNGHT-PSEK----------DAWKIQPEDIAQLVLDLLKMPP  220 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeccccCcccccc-cchh----------hhccCCHHHHHHHHHHHHhCCc
Confidence            99999999999999999997 8899999999999986543221 1110          0113689999999999998765


Q ss_pred             Ccccc
Q 024976          249 VHRDL  253 (259)
Q Consensus       249 ~~~tG  253 (259)
                      ..+.+
T Consensus       221 ~~~~~  225 (237)
T PRK07326        221 RTLPS  225 (237)
T ss_pred             ccccc
Confidence            54443

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=230.03  Aligned_cols=215  Identities=15%  Similarity=0.098  Sum_probs=185.8

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      |+++||||++|||++++++|+++|++|++++|+.++.+...+++... +.++.++++|++++++++++++++.+   .+|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999988877777766543 45789999999999999999988754   479


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ++|||+|.....++.+.+++++.+.+++|+.+++++++++.|+|.+++.        ++||++||..+..+.+....|++
T Consensus        79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~Y~~  150 (243)
T PRK07102         79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGS--------GTIVGISSVAGDRGRASNYVYGS  150 (243)
T ss_pred             EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC--------CEEEEEecccccCCCCCCcccHH
Confidence            9999999877777778899999999999999999999999999987654        88999999999888888899999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHR  251 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (259)
                      +|+++++++++++.|+. +.||++++|+||.++|+.....            ..+...+.+|+++++.++.+++.....+
T Consensus       151 sK~a~~~~~~~l~~el~-~~gi~v~~v~pg~v~t~~~~~~------------~~~~~~~~~~~~~a~~i~~~~~~~~~~i  217 (243)
T PRK07102        151 AKAALTAFLSGLRNRLF-KSGVHVLTVKPGFVRTPMTAGL------------KLPGPLTAQPEEVAKDIFRAIEKGKDVI  217 (243)
T ss_pred             HHHHHHHHHHHHHHHhh-ccCcEEEEEecCcccChhhhcc------------CCCccccCCHHHHHHHHHHHHhCCCCEE
Confidence            99999999999999998 8999999999999997632211            0123346789999999999998654433

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=233.42  Aligned_cols=218  Identities=20%  Similarity=0.250  Sum_probs=180.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||+||||++++++|+++|++|++++|+.+.++...    ..  .+.++.+|+++.++++++++++.+.++++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999999999999999999999876654432    21  3678899999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      +|||||....+++.+.+.+++++.+++|+.+++.++++++|.|.+..         |+||++||..+..+.+....|+++
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~~~~Y~~s  146 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSR---------GLVVNIGSVSGVLVTPFAGAYCAS  146 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC---------CEEEEECCccccCCCCCccHHHHH
Confidence            99999987777888889999999999999999999999999997542         789999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh---------HH--HHHHhhh--hccCCCCCCHHHHHHH
Q 024976          173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---------EE--IRSKATD--YMAAYKFGEKWDIAMA  239 (259)
Q Consensus       173 K~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~---------~~--~~~~~~~--~~~~~~~~~~~dva~~  239 (259)
                      |++++.|+++++.|++ ++||+|+.|+||.++|+........         +.  ..+....  ........+|+++++.
T Consensus       147 K~al~~~~~~l~~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  225 (274)
T PRK05693        147 KAAVHALSDALRLELA-PFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQ  225 (274)
T ss_pred             HHHHHHHHHHHHHHhh-hhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence            9999999999999998 8999999999999997754321110         00  0011111  0111234689999999


Q ss_pred             HHHhcCc
Q 024976          240 ALYLASD  246 (259)
Q Consensus       240 ~~~l~s~  246 (259)
                      ++..+..
T Consensus       226 i~~~~~~  232 (274)
T PRK05693        226 LLAAVQQ  232 (274)
T ss_pred             HHHHHhC
Confidence            9887754

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-34  Score=262.15  Aligned_cols=221  Identities=20%  Similarity=0.204  Sum_probs=190.4

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ....+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+
T Consensus       365 ~~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        365 LRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999888888888876677899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCC--CHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+|++|++|||||......+.+.  +.+++++.+++|+.+++.++++++|.|++++.        |+||++||..++.+.
T Consensus       445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~  516 (657)
T PRK07201        445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRF--------GHVVNVSSIGVQTNA  516 (657)
T ss_pred             hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC--------CEEEEECChhhcCCC
Confidence            99999999999997654444332  35889999999999999999999999987764        899999999999888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +....|++||+++++|+++++.|++ +.||+||+|+||+++|++......           .......+|+++|+.++..
T Consensus       517 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v~T~~~~~~~~-----------~~~~~~~~~~~~a~~i~~~  584 (657)
T PRK07201        517 PRFSAYVASKAALDAFSDVAASETL-SDGITFTTIHMPLVRTPMIAPTKR-----------YNNVPTISPEEAADMVVRA  584 (657)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHH-hhCCcEEEEECCcCcccccCcccc-----------ccCCCCCCHHHHHHHHHHH
Confidence            8899999999999999999999998 889999999999999876432100           0112356889999998886


Q ss_pred             cCc
Q 024976          244 ASD  246 (259)
Q Consensus       244 ~s~  246 (259)
                      +..
T Consensus       585 ~~~  587 (657)
T PRK07201        585 IVE  587 (657)
T ss_pred             HHh
Confidence            643

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-33  Score=227.11  Aligned_cols=230  Identities=26%  Similarity=0.300  Sum_probs=190.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++|+++||||+++||.++++.|+++|++|++++|+.+..+...+.+...+ ++.++.+|+++++++.++++++...++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG-NIHYVVGDVSSTESARNVIEKAAKVLN   80 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999999999887777666665433 588999999999999999999988889


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCccch
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQI  167 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~  167 (259)
                      ++|.+|+++|.....++.  +.++++..+++|+.+++.+.+.++|.+.+.          +++|++||..+. .+.+...
T Consensus        81 ~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----------~~iv~~ss~~~~~~~~~~~~  148 (238)
T PRK05786         81 AIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEG----------SSIVLVSSMSGIYKASPDQL  148 (238)
T ss_pred             CCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcC----------CEEEEEecchhcccCCCCch
Confidence            999999999965443333  338899999999999999999999998652          779999998764 3566778


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.++++++.++. ..||+++.|+||++.|+...     ....+....  ...++.+++|+++.+.+++++.
T Consensus       149 ~Y~~sK~~~~~~~~~~~~~~~-~~gi~v~~i~pg~v~~~~~~-----~~~~~~~~~--~~~~~~~~~~va~~~~~~~~~~  220 (238)
T PRK05786        149 SYAVAKAGLAKAVEILASELL-GRGIRVNGIAPTTISGDFEP-----ERNWKKLRK--LGDDMAPPEDFAKVIIWLLTDE  220 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCccCCCCCc-----hhhhhhhcc--ccCCCCCHHHHHHHHHHHhccc
Confidence            899999999999999999997 88999999999999875421     111111111  1124678999999999999998


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ..+++|+.+.+|
T Consensus       221 ~~~~~g~~~~~~  232 (238)
T PRK05786        221 ADWVDGVVIPVD  232 (238)
T ss_pred             ccCccCCEEEEC
Confidence            999999988876

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-33  Score=231.22  Aligned_cols=222  Identities=23%  Similarity=0.295  Sum_probs=184.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .|+++||||+|+||++++++|+++|++|++++|+.+.++...+..   +.++.++.+|++|.++++++++++.+.++++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999987666554443   34688999999999999999999999899999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +||||||....++..+.+.+++++.+++|+.++++++++++|+|++++.        ++||++||..+..+.++...|++
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~Y~~  150 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGG--------GRIVQVSSEGGQIAYPGFSLYHA  150 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEcCcccccCCCCCchhHH
Confidence            9999999887777788889999999999999999999999999987654        88999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-------hH----HHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PE----EIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      ||++++.|+++++.++. +.||+++.++||.+.|+.......       ..    .....+... +..-..+++|+++++
T Consensus       151 sK~a~~~~~~~l~~~~~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~a~  228 (276)
T PRK06482        151 TKWGIEGFVEAVAQEVA-PFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADG-SFAIPGDPQKMVQAM  228 (276)
T ss_pred             HHHHHHHHHHHHHHHhh-ccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhc-cCCCCCCHHHHHHHH
Confidence            99999999999999998 889999999999997664321110       01    111222111 112246899999999


Q ss_pred             HHhcCc
Q 024976          241 LYLASD  246 (259)
Q Consensus       241 ~~l~s~  246 (259)
                      +..+..
T Consensus       229 ~~~~~~  234 (276)
T PRK06482        229 IASADQ  234 (276)
T ss_pred             HHHHcC
Confidence            998753

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-33  Score=234.47  Aligned_cols=233  Identities=21%  Similarity=0.195  Sum_probs=190.1

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..++.+++++|||+++|||+++|+.|+++|++|++..|+.++.++..+.+...  ..++.++++|+++.+++++++++++
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999999999999998753  4568889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---  161 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  161 (259)
                      +.++++|++|||||+.....  ..+.|.+|..+.+|++|++.+++.++|.|++...        +|||++||..+..   
T Consensus       110 ~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~--------~RIV~vsS~~~~~~~~  179 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP--------SRIVNVSSILGGGKID  179 (314)
T ss_pred             hcCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCC--------CCEEEEcCccccCccc
Confidence            99999999999999875544  5677899999999999999999999999997653        8999999977511   


Q ss_pred             ---------c-CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCC
Q 024976          162 ---------A-TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG  231 (259)
Q Consensus       162 ---------~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (259)
                               . +....+|+.||-+...+++.|++++. . ||.++.++||.+.|+...+   .......+........+.
T Consensus       180 ~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~-~-~V~~~~~hPG~v~t~~l~r---~~~~~~~l~~~l~~~~~k  254 (314)
T KOG1208|consen  180 LKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLK-K-GVTTYSVHPGVVKTTGLSR---VNLLLRLLAKKLSWPLTK  254 (314)
T ss_pred             hhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhh-c-CceEEEECCCcccccceec---chHHHHHHHHHHHHHhcc
Confidence                     0 23334599999999999999999996 5 9999999999999874544   222223233333323335


Q ss_pred             CHHHHHHHHHHhcC-ccCCccccc
Q 024976          232 EKWDIAMAALYLAS-DAAVHRDLI  254 (259)
Q Consensus       232 ~~~dva~~~~~l~s-~~~~~~tG~  254 (259)
                      +++.-|+++++++- ++-...+|.
T Consensus       255 s~~~ga~t~~~~a~~p~~~~~sg~  278 (314)
T KOG1208|consen  255 SPEQGAATTCYAALSPELEGVSGK  278 (314)
T ss_pred             CHHHHhhheehhccCccccCcccc
Confidence            89999999998864 434444443

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=8.1e-33  Score=213.06  Aligned_cols=163  Identities=31%  Similarity=0.432  Sum_probs=152.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC--hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR--KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      |+++||||++|||++++++|+++|. .|++++|+  .+..+++.+++...+.++.++++|++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999999999977 57888998  67778888888877888999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|++|||+|....+++.+.+.++|++.+++|+.+++.+.|+++|   +.         +|+||++||..+..+.+.+..|
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~---------~g~iv~~sS~~~~~~~~~~~~Y  148 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP---QG---------GGKIVNISSIAGVRGSPGMSAY  148 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---HT---------TEEEEEEEEGGGTSSSTTBHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehhee---cc---------ccceEEecchhhccCCCCChhH
Confidence            99999999998888899999999999999999999999999999   22         2999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 024976          170 SAAKAAVDSITRSLALEW  187 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~  187 (259)
                      +++|+|+.+|+++++.|+
T Consensus       149 ~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  149 SASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-32  Score=222.23  Aligned_cols=205  Identities=18%  Similarity=0.144  Sum_probs=170.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++||||++|||++++++|+++|++|++++|+.+.+++..+.    ..++.++.+|++|+++++++++++.   ..+|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~---~~~d~   74 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLP---FIPEL   74 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhcc---cCCCE
Confidence            7899999999999999999999999999999997766554432    3468899999999999999988764   24799


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      +|+|+|.....+..+.++++|++.+++|+.+++++++++.|.|.+.          ++||++||..+..+.+....|+++
T Consensus        75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------~~iv~isS~~~~~~~~~~~~Y~as  144 (240)
T PRK06101         75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCG----------HRVVIVGSIASELALPRAEAYGAS  144 (240)
T ss_pred             EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcC----------CeEEEEechhhccCCCCCchhhHH
Confidence            9999996544444567889999999999999999999999998642          679999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       173 K~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      |+++++|++.++.|+. ++||++++++||.+.|++.....            .......+++++++.++..+...
T Consensus       145 K~a~~~~~~~l~~e~~-~~gi~v~~v~pg~i~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        145 KAAVAYFARTLQLDLR-PKGIEVVTVFPGFVATPLTDKNT------------FAMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHHHHH-hcCceEEEEeCCcCCCCCcCCCC------------CCCCcccCHHHHHHHHHHHHhcC
Confidence            9999999999999998 88999999999999976543211            01122458899999888776543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-33  Score=226.20  Aligned_cols=199  Identities=21%  Similarity=0.156  Sum_probs=161.9

Q ss_pred             HHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCC
Q 024976           28 ISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED  107 (259)
Q Consensus        28 ~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  107 (259)
                      ++++|+++|++|++++|+.+..+     .      ..++++|++|.++++++++++.   +++|+||||||....     
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~-----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT-----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC-----
Confidence            47899999999999999876532     1      2457999999999999998764   689999999996421     


Q ss_pred             CCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------------------------
Q 024976          108 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------------------------  161 (259)
Q Consensus       108 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------------  161 (259)
                         +++++.+++|+.+++.++++++|+|.+.          |+||++||..++.                          
T Consensus        62 ---~~~~~~~~vN~~~~~~l~~~~~~~~~~~----------g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (241)
T PRK12428         62 ---APVELVARVNFLGLRHLTEALLPRMAPG----------GAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAA  128 (241)
T ss_pred             ---CCHHHhhhhchHHHHHHHHHHHHhccCC----------cEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhc
Confidence               3478999999999999999999998542          7899999988763                          


Q ss_pred             -cCccchhhHHHHHHHHHHHHHHH-HHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          162 -ATWYQIHVSAAKAAVDSITRSLA-LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       162 -~~~~~~~Y~~sK~a~~~l~~~la-~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                       +.++...|++||+++++|+++++ .|++ ++|||||+|+||.+.|++..................|.+|+.+|||+|++
T Consensus       129 ~~~~~~~~Y~~sK~a~~~~~~~la~~e~~-~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~  207 (241)
T PRK12428        129 HPVALATGYQLSKEALILWTMRQAQPWFG-ARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAV  207 (241)
T ss_pred             cCCCcccHHHHHHHHHHHHHHHHHHHhhh-ccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHH
Confidence             55677899999999999999999 9998 88999999999999987643321110000011123577889999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+++.+.++||+.|.+|
T Consensus       208 ~~~l~s~~~~~~~G~~i~vd  227 (241)
T PRK12428        208 LVFLCSDAARWINGVNLPVD  227 (241)
T ss_pred             HHHHcChhhcCccCcEEEec
Confidence            99999999999999999887

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=3.2e-32  Score=219.73  Aligned_cols=190  Identities=27%  Similarity=0.303  Sum_probs=172.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++.+|.|+|||+.+|+|+.+|++|.++|+.|+....+++..+.+..+.+  .++...++.|++++++++++.+-+.+..
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            45788999999999999999999999999999988888777777777664  5678899999999999999999888866


Q ss_pred             C--CccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           88 G--KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        88 g--~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +  ++-.||||||+. ..++.+..+.+++++.+++|++|++.++++++|.+++..         ||||++||..|..+.|
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar---------GRvVnvsS~~GR~~~p  173 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR---------GRVVNVSSVLGRVALP  173 (322)
T ss_pred             ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc---------CeEEEecccccCccCc
Confidence            4  599999999976 568888899999999999999999999999999998764         9999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCccc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  209 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~  209 (259)
                      ....|++||+|++.|+.++++|+. +.||+|..|.||...|+...
T Consensus       174 ~~g~Y~~SK~aVeaf~D~lR~EL~-~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  174 ALGPYCVSKFAVEAFSDSLRRELR-PFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHH-hcCcEEEEeccCccccccCC
Confidence            999999999999999999999998 99999999999988876543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=7.8e-33  Score=223.21  Aligned_cols=186  Identities=20%  Similarity=0.277  Sum_probs=166.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHHc--
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHF--   87 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~~--   87 (259)
                      .|+|++||||+.|||++.+++||++|.+|++++|++++++...+|+.+. +..++++.+|.++.+.+-+   ++.+..  
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye---~i~~~l~~  124 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYE---KLLEKLAG  124 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHH---HHHHHhcC
Confidence            4599999999999999999999999999999999999999999999754 5678999999998887333   333333  


Q ss_pred             CCccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           88 GKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        88 g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      ..|.+||||+|...  +..|.+.+.+.+++.+.+|..+...+++.++|.|.+++.        |.||+++|..+..|.|.
T Consensus       125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~--------G~IvnigS~ag~~p~p~  196 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKK--------GIIVNIGSFAGLIPTPL  196 (312)
T ss_pred             CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCC--------ceEEEeccccccccChh
Confidence            36788999999765  667888888899999999999999999999999999876        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  208 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~  208 (259)
                      ++.|+++|+++..|+++|..|+. .+||.|-.+.|..|.|.+-
T Consensus       197 ~s~ysasK~~v~~~S~~L~~Ey~-~~gI~Vq~v~p~~VaTkm~  238 (312)
T KOG1014|consen  197 LSVYSASKAFVDFFSRCLQKEYE-SKGIFVQSVIPYLVATKMA  238 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hcCeEEEEeehhheecccc
Confidence            99999999999999999999998 9999999999999987653

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-32  Score=208.62  Aligned_cols=187  Identities=25%  Similarity=0.362  Sum_probs=168.0

Q ss_pred             CCcEEEEeCCc-cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH-HcC
Q 024976           11 KGKVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN-HFG   88 (259)
Q Consensus        11 ~~k~~lItGa~-~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~-~~g   88 (259)
                      +.|.++|||++ ||||.++++.|++.|+.|+.+.|+.+....+..+.     .+..+..|+++++++..+..++.+ .+|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            56899999887 89999999999999999999999987766655443     388899999999999999999988 679


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+|+||||..-..|..|.+.++.++.|++|++|.+.++|++...+-+.+         |.||++.|..++.|++..+.
T Consensus        81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK---------GtIVnvgSl~~~vpfpf~~i  151 (289)
T KOG1209|consen   81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK---------GTIVNVGSLAGVVPFPFGSI  151 (289)
T ss_pred             ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc---------ceEEEecceeEEeccchhhh
Confidence            999999999987677888999999999999999999999999996555443         99999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL  212 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~  212 (259)
                      |++||+|++.+++.|..|++ +.||+|..+.||.|.|....+.+
T Consensus       152 YsAsKAAihay~~tLrlEl~-PFgv~Vin~itGGv~T~Ia~k~l  194 (289)
T KOG1209|consen  152 YSASKAAIHAYARTLRLELK-PFGVRVINAITGGVATDIADKRL  194 (289)
T ss_pred             hhHHHHHHHHhhhhcEEeee-ccccEEEEecccceecccccCCC
Confidence            99999999999999999998 99999999999999987665543

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=3.7e-31  Score=203.55  Aligned_cols=198  Identities=24%  Similarity=0.250  Sum_probs=160.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHc-CCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH--
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH--   86 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~--   86 (259)
                      ..|.++||||.+|||..++++|.+. |..+++. .|+.+...+..++.....+++++++.|+++.++++++++++.+-  
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            3567999999999999999999975 6666655 45465542222222234678999999999999999999999987  


Q ss_pred             cCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCC---CCCCCCCCceEEEecccccccc
Q 024976           87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR---GQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        87 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      ..++++||+|||+.. .....+.+.+.|.+.+++|..++++++|+|+|.+++...   +...+..++.|||+||.++..+
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence            457999999999864 345556677889999999999999999999999986542   2333455678999999877644


Q ss_pred             C---ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCccc
Q 024976          163 T---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  209 (259)
Q Consensus       163 ~---~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~  209 (259)
                      .   ..+.+|..||+|+.+|+|+++.|++ +.+|-|..+|||+|.|++..
T Consensus       162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~-~~~ilv~sihPGwV~TDMgg  210 (249)
T KOG1611|consen  162 GFRPGGLSAYRMSKAALNMFAKSLSVDLK-DDHILVVSIHPGWVQTDMGG  210 (249)
T ss_pred             CCCCcchhhhHhhHHHHHHHHHHhhhhhc-CCcEEEEEecCCeEEcCCCC
Confidence            3   4568999999999999999999998 99999999999999988765

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-31  Score=215.90  Aligned_cols=219  Identities=23%  Similarity=0.222  Sum_probs=189.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +.++||||++|||+++|..+..+|++|.++.|+.+++.+++++++-.  -.+|.+..+|+.|.+++..+++++.+.++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            69999999999999999999999999999999999999999998633  2347799999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |.+|+|||...++-|.+.++++++..+++|+++.++++++.++.|++...       .|+|+.+||.++..+..++++|+
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~-------~g~I~~vsS~~a~~~i~GysaYs  186 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREH-------LGRIILVSSQLAMLGIYGYSAYS  186 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcccc-------CcEEEEehhhhhhcCcccccccc
Confidence            99999999999999999999999999999999999999999999998752       37999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC-ChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ++|+|+.+|+..+++|+. ++||+|..+.|+.+.||.+-... ..++........   ....++|++|.+++-
T Consensus       187 ~sK~alrgLa~~l~qE~i-~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~---ss~~~~e~~a~~~~~  255 (331)
T KOG1210|consen  187 PSKFALRGLAEALRQELI-KYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGG---SSVIKCEEMAKAIVK  255 (331)
T ss_pred             cHHHHHHHHHHHHHHHHh-hcceEEEEEcCCCCCCCccccccccCchheeeecCC---CCCcCHHHHHHHHHh
Confidence            999999999999999998 89999999999999987543221 112211111111   123568888887664

>PRK08264 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.4e-31  Score=213.87  Aligned_cols=180  Identities=29%  Similarity=0.333  Sum_probs=161.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +.+.+++++||||+|+||++++++|+++|+ +|++++|+.+++++       .+.++.++.+|++|.++++++++.    
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~----   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA----   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh----
Confidence            457899999999999999999999999999 89999998765443       345689999999999999888765    


Q ss_pred             cCCccEEEECCCC-CCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           87 FGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      ++++|++||++|. ....++.+.+.+++++.+++|+.+++.+++++.+.+++++.        +++|++||..++.+.++
T Consensus        71 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~v~~sS~~~~~~~~~  142 (238)
T PRK08264         71 ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGG--------GAIVNVLSVLSWVNFPN  142 (238)
T ss_pred             cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEcChhhccCCCC
Confidence            4689999999998 45667788899999999999999999999999999987654        88999999999998889


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~  207 (259)
                      ...|+.+|++++.+++.++.++. +.||+++.+.||.++|+.
T Consensus       143 ~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        143 LGTYSASKAAAWSLTQALRAELA-PQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeCCcccccc
Confidence            99999999999999999999998 889999999999998764

>PRK08017 oxidoreductase; Provisional

Probab=100.00  E-value=5.2e-31  Score=216.62  Aligned_cols=225  Identities=21%  Similarity=0.192  Sum_probs=182.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-CCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g~id   91 (259)
                      |+++||||+|+||+++++.|+++|++|++++|+.++++...    ..  .+..+.+|++|.++++++++.+.+.. +++|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            78999999999999999999999999999999877655432    22  36788999999999999999887754 6899


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      .+|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|.+.+.        ++||++||..+..+.+....|++
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--------~~iv~~ss~~~~~~~~~~~~Y~~  148 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGE--------GRIVMTSSVMGLISTPGRGAYAA  148 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--------CEEEEEcCcccccCCCCccHHHH
Confidence            9999999776677788899999999999999999999999999987754        78999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHR  251 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (259)
                      +|++++.+.++++.++. ..|++++.|+||.+.|+.......................+.+++|+++.+..+++.....+
T Consensus       149 sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~  227 (256)
T PRK08017        149 SKYALEAWSDALRMELR-HSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPKL  227 (256)
T ss_pred             HHHHHHHHHHHHHHHHh-hcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCCc
Confidence            99999999999999998 88999999999999865432211111000000000011235789999999999997765444


Q ss_pred             c
Q 024976          252 D  252 (259)
Q Consensus       252 t  252 (259)
                      +
T Consensus       228 ~  228 (256)
T PRK08017        228 R  228 (256)
T ss_pred             e
Confidence            3

>PRK09291 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-31  Score=215.35  Aligned_cols=218  Identities=18%  Similarity=0.226  Sum_probs=177.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++..+.....+.++.++.+|++|++++.++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            5799999999999999999999999999999999877777666666556678999999999998877653      4799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +||||||....+++.+.+.++++..+++|+.+++.+++.+++.+.+.+.        ++||++||..+..+.+....|++
T Consensus        76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~SS~~~~~~~~~~~~Y~~  147 (257)
T PRK09291         76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGK--------GKVVFTSSMAGLITGPFTGAYCA  147 (257)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------ceEEEEcChhhccCCCCcchhHH
Confidence            9999999887788888999999999999999999999999999987654        78999999988888888889999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-------hHH-HHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEE-IRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +|++++.++++++.++. +.||+++.|+||++.|+.......       +.. .........+.. ..+++|+++.+..+
T Consensus       148 sK~a~~~~~~~l~~~~~-~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  225 (257)
T PRK09291        148 SKHALEAIAEAMHAELK-PFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLE-QFDPQEMIDAMVEV  225 (257)
T ss_pred             HHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhcccc-CCCHHHHHHHHHHH
Confidence            99999999999999997 889999999999998654221110       000 000000112222 35799998888876


Q ss_pred             cC
Q 024976          244 AS  245 (259)
Q Consensus       244 ~s  245 (259)
                      +.
T Consensus       226 l~  227 (257)
T PRK09291        226 IP  227 (257)
T ss_pred             hc
Confidence            64

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.7e-30  Score=208.53  Aligned_cols=179  Identities=20%  Similarity=0.237  Sum_probs=153.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||++|||++++++|+++|++|++++|+.+..+...+ +    .++.++.+|++|+++++++++++.+  +++|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~----~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~   74 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L----PGVHIEKLDMNDPASLDQLLQRLQG--QRFDL   74 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c----cccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence            689999999999999999999999999999999776544322 1    2477889999999999999988754  57999


Q ss_pred             EEECCCCCCC--CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---ccch
Q 024976           93 LVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---WYQI  167 (259)
Q Consensus        93 li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~  167 (259)
                      +|||+|....  .++.+.+.+++++.+++|+.+++.+++++++++.+.         .++++++||..+..+.   ..+.
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~~~iv~~ss~~g~~~~~~~~~~~  145 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG---------QGVLAFMSSQLGSVELPDGGEMP  145 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc---------CCEEEEEccCccccccCCCCCcc
Confidence            9999997633  456778899999999999999999999999998653         2789999997765443   3567


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  208 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~  208 (259)
                      .|+++|++++.|++.++.|++ ++||++|+|+||+++|++.
T Consensus       146 ~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~i~PG~i~t~~~  185 (225)
T PRK08177        146 LYKASKAALNSMTRSFVAELG-EPTLTVLSMHPGWVKTDMG  185 (225)
T ss_pred             chHHHHHHHHHHHHHHHHHhh-cCCeEEEEEcCCceecCCC
Confidence            899999999999999999998 8999999999999998753

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.6e-30  Score=209.98  Aligned_cols=206  Identities=13%  Similarity=0.115  Sum_probs=155.2

Q ss_pred             CCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         3 ~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      +||....+++|+++||||++|||++++++|+++|++|++++|+.....+  ... . + ...++.+|+++.+++.+    
T Consensus         5 ~~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~~-~-~-~~~~~~~D~~~~~~~~~----   75 (245)
T PRK12367          5 DPMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SND-E-S-PNEWIKWECGKEESLDK----   75 (245)
T ss_pred             chhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hhc-c-C-CCeEEEeeCCCHHHHHH----
Confidence            3666778999999999999999999999999999999999988632111  111 1 1 23578899999988764    


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                         .++++|++|||||....   .+.+.++|++.+++|+.++++++|+++|.|.++....     ++.+++.+|..+..+
T Consensus        76 ---~~~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~-----g~~iiv~ss~a~~~~  144 (245)
T PRK12367         76 ---QLASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQI-----PKEIWVNTSEAEIQP  144 (245)
T ss_pred             ---hcCCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCC-----CeEEEEEecccccCC
Confidence               35789999999997432   3467899999999999999999999999997642100     133444456555544


Q ss_pred             CccchhhHHHHHHHHHHH---HHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSIT---RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~---~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                       +....|++||+|+..+.   +.++.|+. +.|++|+.++||+++|+..                 + ....+|+|+|+.
T Consensus       145 -~~~~~Y~aSKaal~~~~~l~~~l~~e~~-~~~i~v~~~~pg~~~t~~~-----------------~-~~~~~~~~vA~~  204 (245)
T PRK12367        145 -ALSPSYEISKRLIGQLVSLKKNLLDKNE-RKKLIIRKLILGPFRSELN-----------------P-IGIMSADFVAKQ  204 (245)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHhhc-ccccEEEEecCCCcccccC-----------------c-cCCCCHHHHHHH
Confidence             35678999999986544   44555656 7899999999999986531                 1 124689999999


Q ss_pred             HHHhcCccC
Q 024976          240 ALYLASDAA  248 (259)
Q Consensus       240 ~~~l~s~~~  248 (259)
                      +++.++...
T Consensus       205 i~~~~~~~~  213 (245)
T PRK12367        205 ILDQANLGL  213 (245)
T ss_pred             HHHHHhcCC
Confidence            999986543

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=4e-31  Score=203.36  Aligned_cols=235  Identities=18%  Similarity=0.135  Sum_probs=187.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ..+|++|+||+|+|||..++..+.+++-.....++++...+  .+.+. ..+........|++...-+.++++...+..|
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            46789999999999999999998888866555544433322  11121 2233444566788878888888888888889


Q ss_pred             CccEEEECCCCCCC-CCC--CCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           89 KLDILVNAAAGNFL-VPA--EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        89 ~id~li~~ag~~~~-~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      ..|++|||||...+ ...  +..+.++|++.|+.|+++++.+.+.++|.+++++-       .+.+||+||.++..|+..
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~-------~~~vVnvSS~aav~p~~~  154 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV-------NGNVVNVSSLAAVRPFSS  154 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc-------cCeEEEecchhhhccccH
Confidence            99999999997643 222  36788999999999999999999999999988741       277999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----ChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      |+.||++|+|.++|.+.|+.|=  +.++++.+++||.++|++.....    ..++....+.+....+++.+|...++.+.
T Consensus       155 wa~yc~~KaAr~m~f~~lA~EE--p~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~  232 (253)
T KOG1204|consen  155 WAAYCSSKAARNMYFMVLASEE--PFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLA  232 (253)
T ss_pred             HHHhhhhHHHHHHHHHHHhhcC--ccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHH
Confidence            9999999999999999999982  46899999999999988754322    23455666777777889999999999999


Q ss_pred             HhcCccCCccccccc
Q 024976          242 YLASDAAVHRDLIHL  256 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i  256 (259)
                      +|+-... +.+||++
T Consensus       233 ~L~e~~~-f~sG~~v  246 (253)
T KOG1204|consen  233 KLLEKGD-FVSGQHV  246 (253)
T ss_pred             HHHHhcC-ccccccc
Confidence            9995543 9999986

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-29  Score=201.43  Aligned_cols=209  Identities=18%  Similarity=0.157  Sum_probs=166.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||+++||++++++|+++|++|++++|+.+..++..    ..  .+.++.+|+++.++++++++++..  +++|+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG--EALDA   73 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence            58999999999999999999999999999999876554432    22  356899999999999998876642  47999


Q ss_pred             EEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc---h
Q 024976           93 LVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ---I  167 (259)
Q Consensus        93 li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---~  167 (259)
                      +|||+|...  ..++.+.+.++|++.+++|+.+++.+++++.|+|.+. .        |++++++|..+..+....   .
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~--------g~iv~isS~~~~~~~~~~~~~~  144 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-G--------GVLAVLSSRMGSIGDATGTTGW  144 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-C--------CeEEEEcCcccccccccCCCcc
Confidence            999999763  3455677899999999999999999999999988653 2        789999998776654332   2


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.+++.++.++.   ++++|+|+||+++|++...                 .....+++.++.++.++...
T Consensus       145 ~Y~~sK~a~~~~~~~~~~~~~---~i~v~~v~Pg~i~t~~~~~-----------------~~~~~~~~~~~~~~~~~~~~  204 (222)
T PRK06953        145 LYRASKAALNDALRAASLQAR---HATCIALHPGWVRTDMGGA-----------------QAALDPAQSVAGMRRVIAQA  204 (222)
T ss_pred             ccHHhHHHHHHHHHHHhhhcc---CcEEEEECCCeeecCCCCC-----------------CCCCCHHHHHHHHHHHHHhc
Confidence            599999999999999999864   6999999999999875321                 11347788888888876655


Q ss_pred             CCccccccccc
Q 024976          248 AVHRDLIHLLD  258 (259)
Q Consensus       248 ~~~~tG~~i~~  258 (259)
                      ....+|+.+..
T Consensus       205 ~~~~~~~~~~~  215 (222)
T PRK06953        205 TRRDNGRFFQY  215 (222)
T ss_pred             CcccCceEEee
Confidence            55566655433

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.8e-29  Score=199.42  Aligned_cols=210  Identities=22%  Similarity=0.262  Sum_probs=173.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .|+++||||+++||+++++.|+++ ++|++++|+.+..+...+..    ..+.++++|++|+++++++++++    +++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~----~~id   73 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL----GRLD   73 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc----CCCC
Confidence            479999999999999999999999 99999999876655444332    24788999999999998887653    5799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ++||++|.....++.+.+.++|.+.+++|+.+++.+.+.+++.+.++.         +++|++||..+..+.++...|+.
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---------~~~v~~ss~~~~~~~~~~~~y~~  144 (227)
T PRK08219         74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH---------GHVVFINSGAGLRANPGWGSYAA  144 (227)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---------CeEEEEcchHhcCcCCCCchHHH
Confidence            999999987666777888999999999999999999999999988753         78999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      +|++++.+++.++.++. .. |+++.|+||.+.++.... ..     .......+..++.+++|++++++++++..
T Consensus       145 ~K~a~~~~~~~~~~~~~-~~-i~~~~i~pg~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~dva~~~~~~l~~~  212 (227)
T PRK08219        145 SKFALRALADALREEEP-GN-VRVTSVHPGRTDTDMQRG-LV-----AQEGGEYDPERYLRPETVAKAVRFAVDAP  212 (227)
T ss_pred             HHHHHHHHHHHHHHHhc-CC-ceEEEEecCCccchHhhh-hh-----hhhccccCCCCCCCHHHHHHHHHHHHcCC
Confidence            99999999999999886 55 999999999987653221 11     11111223456789999999999999754

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=1.8e-26  Score=198.93  Aligned_cols=202  Identities=17%  Similarity=0.209  Sum_probs=153.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++|+++||||+||||++++++|+++|++|++++|+.++++..   ......++..+.+|++|++++.+.+       +
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~l-------~  244 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGEDLPVKTLHWQVGQEAALAELL-------E  244 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHHh-------C
Confidence            46899999999999999999999999999999999987654332   2222335778899999998876543       5


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++|||||....   .+.+.+++++.+++|+.+++.++++++|.|++++...    .++.+|++|+ ++. ..+..+.
T Consensus       245 ~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~----~~~iiVn~Ss-a~~-~~~~~~~  315 (406)
T PRK07424        245 KVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKA----TKEVWVNTSE-AEV-NPAFSPL  315 (406)
T ss_pred             CCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC----CCeEEEEEcc-ccc-cCCCchH
Confidence            89999999997533   3578899999999999999999999999998754211    0245666665 333 3344678


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||+|+.+|++ +.++   ..++.+..++||++.|++.                 |. ...+||++|+.+++.++...
T Consensus       316 Y~ASKaAl~~l~~-l~~~---~~~~~I~~i~~gp~~t~~~-----------------~~-~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        316 YELSKRALGDLVT-LRRL---DAPCVVRKLILGPFKSNLN-----------------PI-GVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHHHHHH-HHHh---CCCCceEEEEeCCCcCCCC-----------------cC-CCCCHHHHHHHHHHHHHCCC
Confidence            9999999999985 4443   2346777788999875421                 11 24589999999999998766


Q ss_pred             Ccc
Q 024976          249 VHR  251 (259)
Q Consensus       249 ~~~  251 (259)
                      .++
T Consensus       374 ~~i  376 (406)
T PRK07424        374 RNI  376 (406)
T ss_pred             CEE
Confidence            544

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.95  E-value=6.8e-27  Score=235.14  Aligned_cols=182  Identities=18%  Similarity=0.168  Sum_probs=158.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCCh-------------------------------------------
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRK-------------------------------------------   46 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~-------------------------------------------   46 (259)
                      +++++|||||++|||.+++++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999982                                           


Q ss_pred             ----hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccch
Q 024976           47 ----TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV  122 (259)
Q Consensus        47 ----~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  122 (259)
                          .+.....+.+...+.++.++.||++|.++++++++++.+. ++||+||||||+...+.+.+.+.++|++.+++|+.
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence                1112223444555778999999999999999999999876 78999999999988888999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeccc
Q 024976          123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  202 (259)
Q Consensus       123 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~  202 (259)
                      |.+++++++.+.+.            ++||++||..+..+.+++..|+++|+++..+++.++.++.   ++||++|+||+
T Consensus      2155 G~~~Ll~al~~~~~------------~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~---~irV~sI~wG~ 2219 (2582)
T TIGR02813      2155 GLLSLLAALNAENI------------KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP---SAKVMSFNWGP 2219 (2582)
T ss_pred             HHHHHHHHHHHhCC------------CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC---CcEEEEEECCe
Confidence            99999998876432            4599999999999999999999999999999999999875   49999999999


Q ss_pred             ccCCcc
Q 024976          203 IKDTAG  208 (259)
Q Consensus       203 v~t~~~  208 (259)
                      ++|.+.
T Consensus      2220 wdtgm~ 2225 (2582)
T TIGR02813      2220 WDGGMV 2225 (2582)
T ss_pred             ecCCcc
Confidence            987553

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.94  E-value=5.4e-25  Score=194.37  Aligned_cols=219  Identities=12%  Similarity=0.024  Sum_probs=162.7

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-----C----CCeEEEEcCCCCHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-----G----IPAIGLEGDVRKRED   75 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-----~----~~v~~~~~Dl~~~~~   75 (259)
                      ......+||+++||||+|+||++++++|+++|++|++++|+.++++.+.+++...     +    .++.++.+|++|.++
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            3445678999999999999999999999999999999999988877766655321     1    358899999999988


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 024976           76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS  155 (259)
Q Consensus        76 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is  155 (259)
                      +.+.       ++++|+||||+|....      ...++...+++|+.+..++++++...    +.        ++||++|
T Consensus       153 I~~a-------LggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----gV--------gRIV~VS  207 (576)
T PLN03209        153 IGPA-------LGNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATVA----KV--------NHFILVT  207 (576)
T ss_pred             HHHH-------hcCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHHh----CC--------CEEEEEc
Confidence            7654       3689999999996421      12246778899999999998887643    22        7899999


Q ss_pred             ccccc-ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHH
Q 024976          156 ATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW  234 (259)
Q Consensus       156 S~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (259)
                      |..+. .+.+. ..|. +|+++..+.+.+..++. ..||+++.|+||++.++.... ...... .......+.++.++.+
T Consensus       208 Siga~~~g~p~-~~~~-sk~~~~~~KraaE~~L~-~sGIrvTIVRPG~L~tp~d~~-~~t~~v-~~~~~d~~~gr~isre  282 (576)
T PLN03209        208 SLGTNKVGFPA-AILN-LFWGVLCWKRKAEEALI-ASGLPYTIVRPGGMERPTDAY-KETHNL-TLSEEDTLFGGQVSNL  282 (576)
T ss_pred             cchhcccCccc-cchh-hHHHHHHHHHHHHHHHH-HcCCCEEEEECCeecCCcccc-ccccce-eeccccccCCCccCHH
Confidence            98764 23222 2244 78888888899999998 889999999999998653211 111111 1112224567889999


Q ss_pred             HHHHHHHHhcC-ccCCcccc
Q 024976          235 DIAMAALYLAS-DAAVHRDL  253 (259)
Q Consensus       235 dva~~~~~l~s-~~~~~~tG  253 (259)
                      |||+.++||++ +.+.+++-
T Consensus       283 DVA~vVvfLasd~~as~~kv  302 (576)
T PLN03209        283 QVAELMACMAKNRRLSYCKV  302 (576)
T ss_pred             HHHHHHHHHHcCchhccceE
Confidence            99999999999 44465543

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.93  E-value=1.2e-24  Score=168.39  Aligned_cols=175  Identities=21%  Similarity=0.222  Sum_probs=148.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHH---HHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSA---VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~---~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      |+++||||+++||++++++|+++|+ .|++++|+.+..+..   .++++..+.++.++.+|++++++++++++++.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 577888875543322   345555566788999999999999999999998899


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++||++|.....++.+.+.+++++.+++|+.+++.+.+++.+    .+        .++++++||..+..+.+....
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~ii~~ss~~~~~~~~~~~~  148 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LP--------LDFFVLFSSVAGVLGNPGQAN  148 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CC--------cceEEEEccHHHhcCCCCchh
Confidence            999999999987666777888999999999999999999998832    22        278999999999888889999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeccccc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  204 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~  204 (259)
                      |+++|++++.+++.++     ..|+++..+.||++.
T Consensus       149 y~~sk~~~~~~~~~~~-----~~~~~~~~~~~g~~~  179 (180)
T smart00822      149 YAAANAFLDALAAHRR-----ARGLPATSINWGAWA  179 (180)
T ss_pred             hHHHHHHHHHHHHHHH-----hcCCceEEEeecccc
Confidence            9999999999998764     446889999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.92  E-value=3.2e-23  Score=176.08  Aligned_cols=205  Identities=19%  Similarity=0.134  Sum_probs=153.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++|+++||||+|+||++++++|+++|  ++|++++|+........+.+.  ..++.++.+|++|.+++.++++      
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence            578999999999999999999999987  689999987655444433332  2468899999999999888765      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                       ++|+|||+||.... +..+.+   ....+++|+.+++++++++.+.    +.        ++||++||.....|   ..
T Consensus        74 -~iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~----~~--------~~iV~~SS~~~~~p---~~  133 (324)
T TIGR03589        74 -GVDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAIDN----GV--------KRVVALSTDKAANP---IN  133 (324)
T ss_pred             -cCCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEEeCCCCCCC---CC
Confidence             58999999996432 222222   3468999999999999998752    22        68999999765433   45


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhh---ccC------CCCCCHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY---MAA------YKFGEKWDIAM  238 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~dva~  238 (259)
                      .|++||++.+.+++.++.+++ ..|++++.++||.+.++..  ... +.+.......   .+.      .-+...+|+++
T Consensus       134 ~Y~~sK~~~E~l~~~~~~~~~-~~gi~~~~lR~g~v~G~~~--~~i-~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~  209 (324)
T TIGR03589       134 LYGATKLASDKLFVAANNISG-SKGTRFSVVRYGNVVGSRG--SVV-PFFKSLKEEGVTELPITDPRMTRFWITLEQGVN  209 (324)
T ss_pred             HHHHHHHHHHHHHHHHHhhcc-ccCcEEEEEeecceeCCCC--CcH-HHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHH
Confidence            799999999999999988877 7899999999999987642  111 2222222111   221      12578999999


Q ss_pred             HHHHhcCc
Q 024976          239 AALYLASD  246 (259)
Q Consensus       239 ~~~~l~s~  246 (259)
                      +++.++..
T Consensus       210 a~~~al~~  217 (324)
T TIGR03589       210 FVLKSLER  217 (324)
T ss_pred             HHHHHHhh
Confidence            99988753

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=1.4e-23  Score=163.53  Aligned_cols=174  Identities=22%  Similarity=0.265  Sum_probs=138.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh---hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +++||||.+|||..+++.|+++|+ +|++++|+.   ...+...+++...+.++.+++||++|+++++++++++.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            799999999999999999999987 699999982   3455677888888889999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      ||+|||+||.....++.+.+.++++..+...+.+..++.+++.+    ..        ...+|.+||..+..+.+++..|
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~--------l~~~i~~SSis~~~G~~gq~~Y  149 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RP--------LDFFILFSSISSLLGGPGQSAY  149 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TT--------TSEEEEEEEHHHHTT-TTBHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CC--------CCeEEEECChhHhccCcchHhH
Confidence            99999999998888899999999999999999999999888865    21        2568999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeccccc
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  204 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~  204 (259)
                      +++.+.++.|++..+.     .|.++.+|..|...
T Consensus       150 aaAN~~lda~a~~~~~-----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  150 AAANAFLDALARQRRS-----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHHHHHHHH-----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHHHHHHHHHh-----CCCCEEEEEccccC
Confidence            9999999999886644     25678888887664

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.91  E-value=2.2e-22  Score=171.15  Aligned_cols=210  Identities=15%  Similarity=0.052  Sum_probs=153.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh--cCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+|+++||||+|+||++++++|+++|++|+++.|+....+........  ...++.++.+|+++.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            479999999999999999999999999999888886654443322221  12468899999999999888775       


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc----
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----  164 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  164 (259)
                      ++|+|||+||....    ..+.+++...+++|+.+++++++++.+.+.           .++||++||..++.+..    
T Consensus        77 ~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-----------~~~iv~~SS~~~~~~~~~~~~  141 (325)
T PLN02989         77 GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVSS-----------VKRVILTSSMAAVLAPETKLG  141 (325)
T ss_pred             CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC-----------ceEEEEecchhheecCCccCC
Confidence            58999999995421    233456788999999999999999987531           16799999976543210    


Q ss_pred             ------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC--CChHHHHHHhhhh
Q 024976          165 ------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDY  224 (259)
Q Consensus       165 ------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~~~  224 (259)
                                        ....|+.||.+.+.+++.++.++    |++++.++|+.+.+|.....  .............
T Consensus       142 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~  217 (325)
T PLN02989        142 PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN----EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGK  217 (325)
T ss_pred             CCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc----CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCC
Confidence                              02469999999999999887654    59999999999998764432  1122222222222


Q ss_pred             ccC----CCCCCHHHHHHHHHHhcCc
Q 024976          225 MAA----YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       225 ~~~----~~~~~~~dva~~~~~l~s~  246 (259)
                      .+.    ..+...+|+|++++.++..
T Consensus       218 ~~~~~~~r~~i~v~Dva~a~~~~l~~  243 (325)
T PLN02989        218 NPFNTTHHRFVDVRDVALAHVKALET  243 (325)
T ss_pred             CCCCCcCcCeeEHHHHHHHHHHHhcC
Confidence            222    3467789999999988754

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.90  E-value=4.4e-22  Score=170.87  Aligned_cols=213  Identities=18%  Similarity=0.173  Sum_probs=155.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++||+++||||+|+||+++++.|+++|++|++++|+........+.+. .+.++.++.+|+++.+++.+++++.     +
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~   75 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----K   75 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----C
Confidence            468999999999999999999999999999999988665443333332 2335778999999999999998864     5


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------  161 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  161 (259)
                      +|+|||+|+....    ..+.+++...+++|+.+++++++++...   ...        +++|++||...+.        
T Consensus        76 ~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~--------~~iv~~SS~~vyg~~~~~~~~  140 (349)
T TIGR02622        76 PEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAI---GSV--------KAVVNVTSDKCYRNDEWVWGY  140 (349)
T ss_pred             CCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhc---CCC--------CEEEEEechhhhCCCCCCCCC
Confidence            8999999995322    2345567788999999999999987431   111        6799999964332        


Q ss_pred             ----cCccchhhHHHHHHHHHHHHHHHHHhcCC----CCeEEEEEecccccCCcccC--CCChHHHHHHhhhh--c----
Q 024976          162 ----ATWYQIHVSAAKAAVDSITRSLALEWGTD----YAIRVNGIAPGPIKDTAGVS--KLAPEEIRSKATDY--M----  225 (259)
Q Consensus       162 ----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~----~gi~v~~i~pg~v~t~~~~~--~~~~~~~~~~~~~~--~----  225 (259)
                          +..+...|+.+|.+.+.+++.++.++. +    +|++++.++|+.+.++....  .+.+ .+.......  .    
T Consensus       141 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~-~~~~~~~~g~~~~~~~  218 (349)
T TIGR02622       141 RETDPLGGHDPYSSSKACAELVIASYRSSFF-GVANFHGIKIASARAGNVIGGGDWAEDRLIP-DVIRAFSSNKIVIIRN  218 (349)
T ss_pred             ccCCCCCCCCcchhHHHHHHHHHHHHHHHhh-cccccCCCcEEEEccCcccCCCcchhhhhhH-HHHHHHhcCCCeEECC
Confidence                123456799999999999999998875 3    48999999999999764311  1122 222222111  1    


Q ss_pred             --cCCCCCCHHHHHHHHHHhcC
Q 024976          226 --AAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       226 --~~~~~~~~~dva~~~~~l~s  245 (259)
                        ...-+...+|++++++.++.
T Consensus       219 g~~~rd~i~v~D~a~a~~~~~~  240 (349)
T TIGR02622       219 PDATRPWQHVLEPLSGYLLLAE  240 (349)
T ss_pred             CCcccceeeHHHHHHHHHHHHH
Confidence              12235778899999887664

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.90  E-value=1.2e-22  Score=158.82  Aligned_cols=193  Identities=20%  Similarity=0.229  Sum_probs=162.0

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-----eEEEEeCChhhHHHHHHHHHhcCC----CeEEEEcCCCCHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-----AIAIMGRRKTVLRSAVAALHSLGI----PAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-----~vv~~~r~~~~~~~~~~~~~~~~~----~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ..|+++|||++||||.++|.+|.+..-     ++++..|+.++.++.+..+++..+    ++.++.+|+++..++.++..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            358999999999999999999998753     467789999999999999986643    58899999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCC---------------------------CCCHHHHHHHHhccchhHHHHHHHHHHH
Q 024976           82 STINHFGKLDILVNAAAGNFLVPAE---------------------------DLSPNGFRTVIEIDSVGTFIMCHEALKY  134 (259)
Q Consensus        82 ~~~~~~g~id~li~~ag~~~~~~~~---------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~  134 (259)
                      ++.++|.++|.++.|||+.....+.                           ..+.+++...++.|++|+|.+.+.+.|.
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            9999999999999999975432220                           1234678999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCceEEEeccccccc---------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccC
Q 024976          135 LKKGGRGQASSSSGGIIINISATLHYT---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  205 (259)
Q Consensus       135 ~~~~~~~~~~~~~~g~iv~isS~~~~~---------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t  205 (259)
                      +..+..        ..+|++||..+..         ...+..+|+.||.+++-|.-++-+.+. +.|+.-..++||...|
T Consensus       162 l~~~~~--------~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~-~~g~~qyvv~pg~~tt  232 (341)
T KOG1478|consen  162 LCHSDN--------PQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFK-PLGINQYVVQPGIFTT  232 (341)
T ss_pred             hhcCCC--------CeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhcccc-ccchhhhcccCceeec
Confidence            987765        5799999988753         336677899999999999999989887 8999999999998864


Q ss_pred             CcccCCCC
Q 024976          206 TAGVSKLA  213 (259)
Q Consensus       206 ~~~~~~~~  213 (259)
                      . +.....
T Consensus       233 ~-~~~~~l  239 (341)
T KOG1478|consen  233 N-SFSEYL  239 (341)
T ss_pred             c-hhhhhh
Confidence            4 433333

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.90  E-value=1.1e-21  Score=165.46  Aligned_cols=186  Identities=16%  Similarity=0.065  Sum_probs=138.3

Q ss_pred             CCCcEEEEeCCccchHHH--HHHHHHHcCCeEEEEeCChhhH------------HHHHHHHHhcCCCeEEEEcCCCCHHH
Q 024976           10 LKGKVALLTGGGSGIGFE--ISLQLGKHGAAIAIMGRRKTVL------------RSAVAALHSLGIPAIGLEGDVRKRED   75 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~--~a~~l~~~G~~vv~~~r~~~~~------------~~~~~~~~~~~~~v~~~~~Dl~~~~~   75 (259)
                      -.+|++||||+++|||.+  +++.| +.|++|+++++..+..            +...+.+...+..+..+.||++++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            347999999999999999  89999 9999988887543221            22344455556667889999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCC-----------------C----C-------------CCCHHHHHHHHhccc
Q 024976           76 AVRVVESTINHFGKLDILVNAAAGNFLVP-----------------A----E-------------DLSPNGFRTVIEIDS  121 (259)
Q Consensus        76 ~~~~~~~~~~~~g~id~li~~ag~~~~~~-----------------~----~-------------~~~~~~~~~~~~~n~  121 (259)
                      ++++++++.+.+|++|+||||+|......                 +    .             ..+.++++.++++.-
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg  197 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG  197 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence            99999999999999999999999652211                 1    1             123344444433322


Q ss_pred             h-hHHHHHHHHH--HHHHhcCCCCCCCCCCceEEEeccccccccCccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 024976          122 V-GTFIMCHEAL--KYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVN  196 (259)
Q Consensus       122 ~-~~~~l~~~~~--~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  196 (259)
                      - .....++++.  +.|.+          ++++|-+|...+....|.+  ..-+.+|++|+.-+|.|+.+|+ +.|||+|
T Consensus       198 gedw~~Wi~al~~a~lla~----------g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~-~~giran  266 (398)
T PRK13656        198 GEDWELWIDALDEAGVLAE----------GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLA-AKGGDAY  266 (398)
T ss_pred             cchHHHHHHHHHhcccccC----------CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhh-hcCCEEE
Confidence            2 1122333333  23322          3889999998887777665  4779999999999999999999 8999999


Q ss_pred             EEecccccCCc
Q 024976          197 GIAPGPIKDTA  207 (259)
Q Consensus       197 ~i~pg~v~t~~  207 (259)
                      ++.+|++.|..
T Consensus       267 ~i~~g~~~T~A  277 (398)
T PRK13656        267 VSVLKAVVTQA  277 (398)
T ss_pred             EEecCcccchh
Confidence            99999998653

>PRK06720 hypothetical protein; Provisional

Probab=99.89  E-value=8.7e-22  Score=151.16  Aligned_cols=149  Identities=26%  Similarity=0.278  Sum_probs=123.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.+++|+++||||++|||+++++.|+++|++|++++|+.+.++...+++...+.++.++.+|+++.++++++++++.+.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999887777777776656678889999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        88 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      |++|++|||||.... .++.+.++++ ++  .+|+.+.+++++.+.+.|.+++. ....+..||+..+|+.+..
T Consensus        92 G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         92 SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQE-EVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCC-EEEeecCceeeEecccccc
Confidence            999999999998764 4444545555 34  67888889999999999887643 2334446899999987654

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.87  E-value=8.4e-21  Score=167.15  Aligned_cols=184  Identities=16%  Similarity=0.163  Sum_probs=135.8

Q ss_pred             CCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhH----------------HHHHHHHH-hcCCCeEEE
Q 024976            4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL----------------RSAVAALH-SLGIPAIGL   66 (259)
Q Consensus         4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~----------------~~~~~~~~-~~~~~v~~~   66 (259)
                      |.....+++|+++||||+|+||++++++|+++|++|+++++.....                ....+.+. ..+.++.++
T Consensus        39 ~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v  118 (442)
T PLN02572         39 PGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY  118 (442)
T ss_pred             CCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence            3444678899999999999999999999999999999987432100                00111111 113458899


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCC
Q 024976           67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSS  146 (259)
Q Consensus        67 ~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~  146 (259)
                      .+|++|.+.+.+++++.     ++|+|||+|+... .+....++++++..+++|+.+++++++++...-.+         
T Consensus       119 ~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~---------  183 (442)
T PLN02572        119 VGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPD---------  183 (442)
T ss_pred             ECCCCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCC---------
Confidence            99999999999988764     6999999997532 23344556677888999999999999998754211         


Q ss_pred             CCceEEEecccccccc------------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeccc
Q 024976          147 SGGIIINISATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  202 (259)
Q Consensus       147 ~~g~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~  202 (259)
                        .++|++||...+..                        ..+...|+.||.+.+.+.+..+..+    |+++..++|+.
T Consensus       184 --~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~----gl~~v~lR~~~  257 (442)
T PLN02572        184 --CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRATDLNQGV  257 (442)
T ss_pred             --ccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc----CCCEEEEeccc
Confidence              36999998764421                        1123579999999999988776654    59999999999


Q ss_pred             ccCCcc
Q 024976          203 IKDTAG  208 (259)
Q Consensus       203 v~t~~~  208 (259)
                      +..+..
T Consensus       258 vyGp~~  263 (442)
T PLN02572        258 VYGVRT  263 (442)
T ss_pred             ccCCCC
Confidence            987753

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.87  E-value=3.3e-20  Score=158.71  Aligned_cols=220  Identities=18%  Similarity=0.068  Sum_probs=146.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-----HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      .++++|+++||||+|+||++++++|+++|++|++++|+.+.     ++...++....+.++.++.+|++|.+++.++++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999887542     2221111111234588999999999999999886


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +     .+|+|||+|+.....    ...++....+++|+.++.++++++.+.+.+++.       ..++|++||...+..
T Consensus        82 ~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~-------~~~~v~~Ss~~vyg~  145 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGR-------QIKYYQAGSSEMYGS  145 (340)
T ss_pred             c-----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhcccccc-------ceeEEEeccHHHhCC
Confidence            4     599999999964322    122345677899999999999999887654311       125888887543321


Q ss_pred             ----------CccchhhHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEecccccCCcccCCCChHHHHHHhhhh------
Q 024976          163 ----------TWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY------  224 (259)
Q Consensus       163 ----------~~~~~~Y~~sK~a~~~l~~~la~e~~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~------  224 (259)
                                ..+...|+.||.+.+.++++++.+++.  ..++.+|.+.|+...+  +...... .....+...      
T Consensus       146 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~--~~~~~~~-~~~~~~~~~~~~~~~  222 (340)
T PLN02653        146 TPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGEN--FVTRKIT-RAVGRIKVGLQKKLF  222 (340)
T ss_pred             CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcc--cchhHHH-HHHHHHHcCCCCceE
Confidence                      123567999999999999999887641  1123344445543221  1000000 111111111      


Q ss_pred             ----ccCCCCCCHHHHHHHHHHhcCc
Q 024976          225 ----MAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       225 ----~~~~~~~~~~dva~~~~~l~s~  246 (259)
                          .+..-+...+|++++++.++..
T Consensus       223 ~g~g~~~rd~i~v~D~a~a~~~~~~~  248 (340)
T PLN02653        223 LGNLDASRDWGFAGDYVEAMWLMLQQ  248 (340)
T ss_pred             eCCCcceecceeHHHHHHHHHHHHhc
Confidence                1112357899999999998854

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.86  E-value=6.1e-20  Score=157.89  Aligned_cols=213  Identities=15%  Similarity=0.053  Sum_probs=150.7

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -+++++|||||+|+||++++++|+++|++|++++|+.+..+...+.+.. +.++.++.+|+++.+++.++++       .
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------G   79 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------C
Confidence            3578999999999999999999999999999999887655555444432 3568899999999999887764       5


Q ss_pred             ccEEEECCCCCCCCC-CCCCCHHHH--HHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---
Q 024976           90 LDILVNAAAGNFLVP-AEDLSPNGF--RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---  163 (259)
Q Consensus        90 id~li~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  163 (259)
                      +|+|||+|+...... ....+++.+  .+.++.|+.+++++++++.+..   ..        ++||++||...+...   
T Consensus        80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~--------~~~v~~SS~~vyg~~~~~  148 (353)
T PLN02896         80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TV--------KRVVFTSSISTLTAKDSN  148 (353)
T ss_pred             CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---Cc--------cEEEEEechhhccccccC
Confidence            899999999754321 122233333  4567788899999999887542   11        579999997654311   


Q ss_pred             ----------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh--HHHHH
Q 024976          164 ----------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRS  219 (259)
Q Consensus       164 ----------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~--~~~~~  219 (259)
                                            +....|+.||.+.+.+++.++.++    |+++..++|+.+..|.....++.  .....
T Consensus       149 ~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~  224 (353)
T PLN02896        149 GRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN----GIDLVSVITTTVAGPFLTPSVPSSIQVLLS  224 (353)
T ss_pred             CCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCcccCCCcCCCCCchHHHHHH
Confidence                                  011379999999999999887654    59999999999988754433221  11111


Q ss_pred             Hhhhhcc-------------CCCCCCHHHHHHHHHHhcC
Q 024976          220 KATDYMA-------------AYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       220 ~~~~~~~-------------~~~~~~~~dva~~~~~l~s  245 (259)
                      .+.....             ..-+...+|++++++.++.
T Consensus       225 ~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~  263 (353)
T PLN02896        225 PITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLME  263 (353)
T ss_pred             HhcCCccccccccccccccCceeEEeHHHHHHHHHHHHh
Confidence            1111000             0125789999999999875

>PLN02650 dihydroflavonol-4-reductase

Probab=99.86  E-value=3.3e-20  Score=159.37  Aligned_cols=209  Identities=13%  Similarity=0.052  Sum_probs=149.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ..|++|||||+|.||++++++|+++|++|++++|+.+............  ..++.++.+|++|.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4679999999999999999999999999999988866554443322211  2358889999999998887765       


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----c
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----W  164 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~  164 (259)
                      .+|+|||+|+.....   .  .+.+...+++|+.+++++++++.+...   .        .+||++||...+.+.    +
T Consensus        77 ~~d~ViH~A~~~~~~---~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~---~--------~r~v~~SS~~~~~~~~~~~~  140 (351)
T PLN02650         77 GCTGVFHVATPMDFE---S--KDPENEVIKPTVNGMLSIMKACAKAKT---V--------RRIVFTSSAGTVNVEEHQKP  140 (351)
T ss_pred             CCCEEEEeCCCCCCC---C--CCchhhhhhHHHHHHHHHHHHHHhcCC---c--------eEEEEecchhhcccCCCCCC
Confidence            589999999853211   1  122357789999999999999876421   1        569999987543210    0


Q ss_pred             ------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHH--Hhhh-
Q 024976          165 ------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS--KATD-  223 (259)
Q Consensus       165 ------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~--~~~~-  223 (259)
                                        +...|+.||.+.+.+++.++.++    |++++.++|+.+.+|.......+.....  .... 
T Consensus       141 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~  216 (351)
T PLN02650        141 VYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN----GLDFISIIPTLVVGPFISTSMPPSLITALSLITGN  216 (351)
T ss_pred             ccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc----CCeEEEECCCceECCCCCCCCCccHHHHHHHhcCC
Confidence                              11369999999999999887754    5999999999999876443322211111  0111 


Q ss_pred             h-----ccCCCCCCHHHHHHHHHHhcCc
Q 024976          224 Y-----MAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       224 ~-----~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      .     .....+...+|+++++++++..
T Consensus       217 ~~~~~~~~~r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        217 EAHYSIIKQGQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             ccccCcCCCcceeeHHHHHHHHHHHhcC
Confidence            0     1123578899999999998864

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=6.2e-20  Score=155.88  Aligned_cols=210  Identities=17%  Similarity=0.090  Sum_probs=147.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH--hcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--SLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..||+++||||+|+||++++++|+++|++|+++.|+....+...+...  ....++.++.+|+++.+.+.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            468999999999999999999999999999988887665443332222  112468899999999999888876      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cC---
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-AT---  163 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~---  163 (259)
                       .+|+|||+|+.....     ..+...+.+++|+.++.++++++...   .+.        .+||++||..++. +.   
T Consensus        77 -~~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v--------~rvV~~SS~~~~~~~~~~~  139 (322)
T PLN02986         77 -GCDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PSV--------KRVILTSSTAAVLFRQPPI  139 (322)
T ss_pred             -CCCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCc--------cEEEEecchhheecCCccC
Confidence             589999999963221     11223567899999999999887542   111        5799999976531 11   


Q ss_pred             -------------c-----cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC--ChHHHHHHhhh
Q 024976          164 -------------W-----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATD  223 (259)
Q Consensus       164 -------------~-----~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~  223 (259)
                                   +     ....|+.||.+.+.+++.+..++    |++++.++|+.+.+|......  ...........
T Consensus       140 ~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~----~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g  215 (322)
T PLN02986        140 EANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN----GIDMVVLNPGFICGPLLQPTLNFSVELIVDFING  215 (322)
T ss_pred             CCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh----CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcC
Confidence                         0     13569999999998888876654    599999999999977543221  11111111111


Q ss_pred             hc----cCCCCCCHHHHHHHHHHhcCc
Q 024976          224 YM----AAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       224 ~~----~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..    ....+...+|+|++++.++..
T Consensus       216 ~~~~~~~~~~~v~v~Dva~a~~~al~~  242 (322)
T PLN02986        216 KNLFNNRFYRFVDVRDVALAHIKALET  242 (322)
T ss_pred             CCCCCCcCcceeEHHHHHHHHHHHhcC
Confidence            11    112477899999999988864

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.86  E-value=1.3e-19  Score=154.95  Aligned_cols=209  Identities=16%  Similarity=0.065  Sum_probs=146.0

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHH--HHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA--ALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~--~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++++||||+|+||++++++|+++|++|+++.|+.+.......  .+.. ..++.++.+|++|.+++.++++      
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh------
Confidence            457899999999999999999999999999888887654332221  1211 1258899999999998887764      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----  163 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  163 (259)
                       ++|+|||+|+...   ..  ..+.+...+++|+.++.++++++.+..   +.        ++||++||...+...    
T Consensus        80 -~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~~--------~~~v~~SS~~~~g~~~~~~  142 (338)
T PLN00198         80 -GCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKAK---SV--------KRVILTSSAAAVSINKLSG  142 (338)
T ss_pred             -cCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---Cc--------cEEEEeecceeeeccCCCC
Confidence             5899999998421   11  112345678999999999999987531   11        679999997654311    


Q ss_pred             --------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh--HHHHHHh
Q 024976          164 --------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKA  221 (259)
Q Consensus       164 --------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~--~~~~~~~  221 (259)
                                          ++...|+.||.+.+.+++.++.++    |+++..++|+.+..|........  .......
T Consensus       143 ~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~  218 (338)
T PLN00198        143 TGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN----NIDLITVIPTLMAGPSLTSDIPSSLSLAMSLI  218 (338)
T ss_pred             CCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc----CceEEEEeCCceECCCccCCCCCcHHHHHHHH
Confidence                                124469999999999998887654    59999999999987753222111  0011101


Q ss_pred             hh---------hccC----CCCCCHHHHHHHHHHhcCc
Q 024976          222 TD---------YMAA----YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       222 ~~---------~~~~----~~~~~~~dva~~~~~l~s~  246 (259)
                      ..         ..+.    ..+...+|++++++.++..
T Consensus       219 ~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        219 TGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             cCCccccccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence            00         0111    2467899999999998864

>PLN02583 cinnamoyl-CoA reductase

Probab=99.85  E-value=9.3e-20  Score=153.06  Aligned_cols=206  Identities=9%  Similarity=0.003  Sum_probs=143.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh--HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      -.+|+++||||+|+||++++++|+++|++|+++.|+.+.  .......+...+.++.++.+|++|.+++.+++.      
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------   77 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------   77 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc------
Confidence            357899999999999999999999999999999886432  222223332223468889999999998876653      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---c
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---W  164 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~  164 (259)
                       .+|.++|.++....     .+ .+++..+++|+.+++++++++.+.+.   .        ++||++||..++...   .
T Consensus        78 -~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~~---v--------~riV~~SS~~a~~~~~~~~  139 (297)
T PLN02583         78 -GCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTDT---I--------EKVVFTSSLTAVIWRDDNI  139 (297)
T ss_pred             -CCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcCC---c--------cEEEEecchHheecccccC
Confidence             58899987653211     11 24678999999999999999987531   1        679999998664211   0


Q ss_pred             -------------cc------hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhc
Q 024976          165 -------------YQ------IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM  225 (259)
Q Consensus       165 -------------~~------~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  225 (259)
                                   ..      ..|+.||...+.++..++.+    .|++++.|+|+.+.++......  . .........
T Consensus       140 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~----~gi~~v~lrp~~v~Gp~~~~~~--~-~~~~~~~~~  212 (297)
T PLN02583        140 STQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD----RGVNMVSINAGLLMGPSLTQHN--P-YLKGAAQMY  212 (297)
T ss_pred             CCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH----hCCcEEEEcCCcccCCCCCCch--h-hhcCCcccC
Confidence                         00      15999999998888877654    3699999999999876542211  1 110000111


Q ss_pred             cC--CCCCCHHHHHHHHHHhcCc
Q 024976          226 AA--YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       226 ~~--~~~~~~~dva~~~~~l~s~  246 (259)
                      +.  ..+...+|+|++++..+..
T Consensus       213 ~~~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        213 ENGVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             cccCcceEEHHHHHHHHHHHhcC
Confidence            11  1367899999999988853

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.84  E-value=2.8e-19  Score=153.90  Aligned_cols=216  Identities=20%  Similarity=0.151  Sum_probs=146.9

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEE-EEeCChhh--HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIA-IMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv-~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      |+++||||+|+||+++++.|.++|++++ ++++....  ..... .+ ..+.++.++.+|++|.+++++++++.     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PV-AQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hc-ccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            5899999999999999999999998754 55554321  11111 11 12335788999999999999888752     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------  161 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  161 (259)
                      +|+|||+||....    +.+.++++..+++|+.+++++++++.+.|......   .....++|++||...+.        
T Consensus        75 ~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~---~~~~~~~i~~SS~~vyg~~~~~~~~  147 (355)
T PRK10217         75 PDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED---KKSAFRFHHISTDEVYGDLHSTDDF  147 (355)
T ss_pred             CCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhccccc---ccCceEEEEecchhhcCCCCCCCCC
Confidence            9999999996432    23445678999999999999999998764311000   00014799999864322        


Q ss_pred             -----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-CChHHHHHHhhhh-cc-------C
Q 024976          162 -----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDY-MA-------A  227 (259)
Q Consensus       162 -----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~-~~-------~  227 (259)
                           +..+...|+.||.+.+.+++.++.+++    +++..+.|+.+..|..... +.+.......... .+       .
T Consensus       148 ~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~----~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  223 (355)
T PRK10217        148 FTETTPYAPSSPYSASKASSDHLVRAWLRTYG----LPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQI  223 (355)
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC----CCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCee
Confidence                 223456799999999999999987764    8889999998887654221 1111112112111 11       1


Q ss_pred             CCCCCHHHHHHHHHHhcCc
Q 024976          228 YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~  246 (259)
                      .-+...+|+++++..++..
T Consensus       224 ~~~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        224 RDWLYVEDHARALYCVATT  242 (355)
T ss_pred             eCcCcHHHHHHHHHHHHhc
Confidence            2368899999999887754

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.84  E-value=3.7e-19  Score=146.75  Aligned_cols=218  Identities=14%  Similarity=0.074  Sum_probs=159.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH--HHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++|+||||+|.||++++++|+++|++|....|+++..+.  ...++.....+.+.+..|++|+++++.+++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            68999999999999999999999999999999999887444  355666556679999999999999999987       


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-cc--
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WY--  165 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~--  165 (259)
                      +.|+|+|.|..+....   .+  .-.+.++..+.|+.++++++...-   .-        -|||++||.++..+. +.  
T Consensus        78 gcdgVfH~Asp~~~~~---~~--~e~~li~pav~Gt~nVL~ac~~~~---sV--------krvV~TSS~aAv~~~~~~~~  141 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFDL---ED--PEKELIDPAVKGTKNVLEACKKTK---SV--------KRVVYTSSTAAVRYNGPNIG  141 (327)
T ss_pred             CCCEEEEeCccCCCCC---CC--cHHhhhhHHHHHHHHHHHHHhccC---Cc--------ceEEEeccHHHhccCCcCCC
Confidence            6999999999654322   11  123788999999999999997643   11        569999999887643 11  


Q ss_pred             ---------c----------hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh--HHHHHHhhhh
Q 024976          166 ---------Q----------IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDY  224 (259)
Q Consensus       166 ---------~----------~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~--~~~~~~~~~~  224 (259)
                               |          ..|+.||    .+++..|-+++.+.|+....|.|+.|..|.....+..  ....+.+...
T Consensus       142 ~~~vvdE~~wsd~~~~~~~~~~Y~~sK----~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~  217 (327)
T KOG1502|consen  142 ENSVVDEESWSDLDFCRCKKLWYALSK----TLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGL  217 (327)
T ss_pred             CCcccccccCCcHHHHHhhHHHHHHHH----HHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcc
Confidence                     1          2477777    5555556666645679999999999998877764332  1222222221


Q ss_pred             cc-----CCCCCCHHHHHHHHHHhcCccCCcccccccc
Q 024976          225 MA-----AYKFGEKWDIAMAALYLASDAAVHRDLIHLL  257 (259)
Q Consensus       225 ~~-----~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~  257 (259)
                      .+     ...+.+..|||.+-++++..+..  .|+.|.
T Consensus       218 ~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a--~GRyic  253 (327)
T KOG1502|consen  218 AETYPNFWLAFVDVRDVALAHVLALEKPSA--KGRYIC  253 (327)
T ss_pred             cccCCCCceeeEeHHHHHHHHHHHHcCccc--CceEEE
Confidence            11     12357899999999999865544  365543

>PLN02214 cinnamoyl-CoA reductase

Probab=99.84  E-value=6e-19  Score=151.01  Aligned_cols=205  Identities=14%  Similarity=0.052  Sum_probs=146.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH-HHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+.... ....+.....++.++.+|++|.+++.++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            568899999999999999999999999999999987654322 122332222358889999999999888775       


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----  163 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  163 (259)
                      ++|+|||+|+...         +++...+++|+.++.++++++...    +.        .+||++||..+..+.     
T Consensus        81 ~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~----~v--------~r~V~~SS~~avyg~~~~~~  139 (342)
T PLN02214         81 GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAEA----KV--------KRVVITSSIGAVYMDPNRDP  139 (342)
T ss_pred             cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhc----CC--------CEEEEeccceeeeccCCCCC
Confidence            5899999999531         235678899999999999988642    22        579999996533211     


Q ss_pred             ----------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh--HHHHHHhhhhc
Q 024976          164 ----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYM  225 (259)
Q Consensus       164 ----------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~--~~~~~~~~~~~  225 (259)
                                      .....|+.||.+.+.+++.++.++    |+++..++|+.+..|........  ......+....
T Consensus       140 ~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~  215 (342)
T PLN02214        140 EAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK----GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSA  215 (342)
T ss_pred             CcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCc
Confidence                            023469999999999998887654    59999999999998754322111  11111111111


Q ss_pred             c-----CCCCCCHHHHHHHHHHhcCc
Q 024976          226 A-----AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       226 ~-----~~~~~~~~dva~~~~~l~s~  246 (259)
                      +     ..-+...+|+|++++.++..
T Consensus       216 ~~~~~~~~~~i~V~Dva~a~~~al~~  241 (342)
T PLN02214        216 KTYANLTQAYVDVRDVALAHVLVYEA  241 (342)
T ss_pred             ccCCCCCcCeeEHHHHHHHHHHHHhC
Confidence            1     12356799999999988853

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=4.8e-19  Score=150.33  Aligned_cols=209  Identities=15%  Similarity=0.091  Sum_probs=145.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH--hcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--SLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++|+++||||+|+||++++++|+++|++|+++.|+............  ....++.++.+|++|.+++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            47899999999999999999999999999999887654332222111  112468899999999988877765       


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc--cccC---
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH--YTAT---  163 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---  163 (259)
                      .+|+|||+|+.....   ...  .....+++|+.++.++++++....   +.        .+||++||..+  +.+.   
T Consensus        76 ~~d~Vih~A~~~~~~---~~~--~~~~~~~~nv~gt~~ll~a~~~~~---~~--------~~~v~~SS~~~~~y~~~~~~  139 (322)
T PLN02662         76 GCEGVFHTASPFYHD---VTD--PQAELIDPAVKGTLNVLRSCAKVP---SV--------KRVVVTSSMAAVAYNGKPLT  139 (322)
T ss_pred             CCCEEEEeCCcccCC---CCC--hHHHHHHHHHHHHHHHHHHHHhCC---CC--------CEEEEccCHHHhcCCCcCCC
Confidence            589999999964211   111  124788999999999999986431   11        57999999753  2111   


Q ss_pred             ------------cc-----chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC--CChHHHHHHhhh-
Q 024976          164 ------------WY-----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATD-  223 (259)
Q Consensus       164 ------------~~-----~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~~-  223 (259)
                                  +.     ...|+.+|.+.+.+++.+..++    |++++.++|+.+.++.....  .........+.. 
T Consensus       140 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~  215 (322)
T PLN02662        140 PDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN----GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGA  215 (322)
T ss_pred             CCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCC
Confidence                        10     1369999999998888776543    59999999999997754321  112222221111 


Q ss_pred             -hcc--CCCCCCHHHHHHHHHHhcCc
Q 024976          224 -YMA--AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       224 -~~~--~~~~~~~~dva~~~~~l~s~  246 (259)
                       ..+  ...+...+|++++++.++..
T Consensus       216 ~~~~~~~~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        216 QTFPNASYRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             ccCCCCCcCeEEHHHHHHHHHHHhcC
Confidence             111  12468899999999988864

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.83  E-value=1.2e-18  Score=149.35  Aligned_cols=158  Identities=19%  Similarity=0.125  Sum_probs=116.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-----HHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-----~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      |+++||||+|+||++++++|+++|++|++++|+.+.     ++...+.+. ..+.++.++.+|++|.+++.++++.+   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999987542     222111111 11345889999999999999998864   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  161 (259)
                        ++|+|||+|+......    ..+.....+++|+.++.++++++.+.-.++         ..++|++||...+.     
T Consensus        78 --~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~---------~~~~v~~SS~~vyg~~~~~  142 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIK---------SVKFYQASTSELYGKVQEI  142 (343)
T ss_pred             --CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCc---------CeeEEEeccHHhhCCCCCC
Confidence              5899999999653321    112235667889999999999998642211         03689999864432     


Q ss_pred             ------cCccchhhHHHHHHHHHHHHHHHHHhc
Q 024976          162 ------ATWYQIHVSAAKAAVDSITRSLALEWG  188 (259)
Q Consensus       162 ------~~~~~~~Y~~sK~a~~~l~~~la~e~~  188 (259)
                            +..+...|+.||.+.+.+++.++.+++
T Consensus       143 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  175 (343)
T TIGR01472       143 PQNETTPFYPRSPYAAAKLYAHWITVNYREAYG  175 (343)
T ss_pred             CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence                  122456799999999999999988764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.83  E-value=1e-18  Score=147.65  Aligned_cols=208  Identities=19%  Similarity=0.124  Sum_probs=143.8

Q ss_pred             EEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChh-hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +++||||+|+||++++++|++.|  ++|++++|... ...+..+.+.. ..++.++.+|++|++++.++++..     ++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH-----QP   74 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence            48999999999999999999987  67888876421 11111122221 235788999999999999888753     59


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--------  162 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------  162 (259)
                      |+|||+|+.....    .+.++++..+++|+.++..+++++...+.+           .++|++||...+..        
T Consensus        75 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----------~~~i~~Ss~~v~g~~~~~~~~~  139 (317)
T TIGR01181        75 DAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWHE-----------FRFHHISTDEVYGDLEKGDAFT  139 (317)
T ss_pred             CEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCCC-----------ceEEEeeccceeCCCCCCCCcC
Confidence            9999999964322    233456778999999999999888664322           46999998543221        


Q ss_pred             ----CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhh--ccC-------CC
Q 024976          163 ----TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MAA-------YK  229 (259)
Q Consensus       163 ----~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~  229 (259)
                          ..+...|+.+|.+.+.+++.++.++    ++++..++|+.+..+........+.........  .+.       .-
T Consensus       140 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  215 (317)
T TIGR01181       140 ETTPLAPSSPYSASKAASDHLVRAYHRTY----GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRD  215 (317)
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEe
Confidence                1234479999999999999987765    489999999999866433221111222221111  111       12


Q ss_pred             CCCHHHHHHHHHHhcCc
Q 024976          230 FGEKWDIAMAALYLASD  246 (259)
Q Consensus       230 ~~~~~dva~~~~~l~s~  246 (259)
                      +...+|+++++..++.+
T Consensus       216 ~i~v~D~a~~~~~~~~~  232 (317)
T TIGR01181       216 WLYVEDHCRAIYLVLEK  232 (317)
T ss_pred             eEEHHHHHHHHHHHHcC
Confidence            56789999999988854

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.81  E-value=8.4e-18  Score=144.47  Aligned_cols=173  Identities=20%  Similarity=0.138  Sum_probs=126.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH----hcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH----SLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +++++|+++||||+|+||++++++|+++|++|++++|.........+.+.    ..+.++.++.+|++|++++.+++++.
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            35678999999999999999999999999999999875432222111221    12346889999999999999988752


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--  161 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--  161 (259)
                           .+|+|||+|+.....    .+.+++.+.+++|+.++.++++++..    .+.        .++|++||...+.  
T Consensus        81 -----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--------~~~v~~Ss~~vyg~~  139 (352)
T PLN02240         81 -----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMAK----HGC--------KKLVFSSSATVYGQP  139 (352)
T ss_pred             -----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHHH----cCC--------CEEEEEccHHHhCCC
Confidence                 699999999964322    13345678899999999999886532    222        5799999964332  


Q ss_pred             ---------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeccccc
Q 024976          162 ---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  204 (259)
Q Consensus       162 ---------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~  204 (259)
                               +..+...|+.+|.+.+.+++.++.+.   .++++..+.|+.+.
T Consensus       140 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~R~~~v~  188 (352)
T PLN02240        140 EEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD---PEWKIILLRYFNPV  188 (352)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCCEEEEeecCcC
Confidence                     11235689999999999999887642   34777777765554

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.80  E-value=7.1e-18  Score=145.00  Aligned_cols=215  Identities=19%  Similarity=0.148  Sum_probs=143.8

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCe-EEEEeCCh--hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +++||||+|+||++++++|+++|.+ |+.+++..  ...+... .+. .+.++.++.+|++|.+++++++++.     ++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            6999999999999999999999986 55565532  1122211 111 1345788999999999999988752     69


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---------  161 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------  161 (259)
                      |+|||+|+......    +.++.+..+++|+.++.++++++.++|.......   ....++|++||...+.         
T Consensus        75 d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~  147 (352)
T PRK10084         75 DAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDK---KNAFRFHHISTDEVYGDLPHPDEVE  147 (352)
T ss_pred             CEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhcccccccc---ccceeEEEecchhhcCCCCcccccc
Confidence            99999999643221    2233467899999999999999998764221000   0014799999864332         


Q ss_pred             ------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC-CCChHHHHHHhhh-hcc-
Q 024976          162 ------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS-KLAPEEIRSKATD-YMA-  226 (259)
Q Consensus       162 ------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~-~~~~~~~~~~~~~-~~~-  226 (259)
                                  +..+...|+.||.+.+.+++.++.+++    +++..+.|+.+..+.... .+.+......... ..+ 
T Consensus       148 ~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g----~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~  223 (352)
T PRK10084        148 NSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYG----LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI  223 (352)
T ss_pred             ccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhC----CCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEE
Confidence                        112346899999999999999887764    677778888887665321 1112111111111 111 


Q ss_pred             ------CCCCCCHHHHHHHHHHhcCc
Q 024976          227 ------AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 ------~~~~~~~~dva~~~~~l~s~  246 (259)
                            ..-+...+|+++++..++..
T Consensus       224 ~~~g~~~~~~v~v~D~a~a~~~~l~~  249 (352)
T PRK10084        224 YGKGDQIRDWLYVEDHARALYKVVTE  249 (352)
T ss_pred             eCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence                  11267799999999887754

>PLN02686 cinnamoyl-CoA reductase

Probab=99.80  E-value=1.4e-17  Score=143.72  Aligned_cols=210  Identities=10%  Similarity=0.045  Sum_probs=143.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc------CCCeEEEEcCCCCHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ...++|+++||||+|+||+++++.|+++|++|+++.|+.+..+.+ +.+...      ..++.++.+|++|.+++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            356789999999999999999999999999999888876654443 222211      1257889999999999988876


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc--
Q 024976           82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH--  159 (259)
Q Consensus        82 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--  159 (259)
                             .+|.+||.++.........    ......++|+.++.++++++...   .+.        .++|++||..+  
T Consensus       128 -------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~v--------~r~V~~SS~~~~v  185 (367)
T PLN02686        128 -------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRT---ESV--------RKCVFTSSLLACV  185 (367)
T ss_pred             -------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhc---CCc--------cEEEEeccHHHhc
Confidence                   3789999998653322111    11244567899999998887532   111        46999998531  


Q ss_pred             c-----c--c--------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHH
Q 024976          160 Y-----T--A--------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR  218 (259)
Q Consensus       160 ~-----~--~--------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~  218 (259)
                      +     .  +              ..+...|+.||.+.+.+++.++.+    .|++++.++|+.+.+|...... +....
T Consensus       186 yg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~gl~~v~lRp~~vyGp~~~~~~-~~~~~  260 (367)
T PLN02686        186 WRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG----KGLKLATICPALVTGPGFFRRN-STATI  260 (367)
T ss_pred             ccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh----cCceEEEEcCCceECCCCCCCC-ChhHH
Confidence            1     0  0              012346999999999999887665    3699999999999987543221 11111


Q ss_pred             HHhhhhcc---CC--CCCCHHHHHHHHHHhcC
Q 024976          219 SKATDYMA---AY--KFGEKWDIAMAALYLAS  245 (259)
Q Consensus       219 ~~~~~~~~---~~--~~~~~~dva~~~~~l~s  245 (259)
                      ..+....+   .+  .+...+|++++++.++.
T Consensus       261 ~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        261 AYLKGAQEMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             HHhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            21111111   11  25679999999988875

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.79  E-value=1.3e-17  Score=143.16  Aligned_cols=210  Identities=16%  Similarity=0.077  Sum_probs=144.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-----cCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      .+++|+++||||+|.||++++++|.++|++|++++|...........+..     ...++.++.+|+.|.+.+.++++  
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--
Confidence            36779999999999999999999999999999998865432222222211     11357889999999988777765  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                           .+|+|||.|+......    ..++....+++|+.++.++++++..    .+.        .++|++||...+...
T Consensus        90 -----~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~----~~~--------~~~v~~SS~~vyg~~  148 (348)
T PRK15181         90 -----NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAARD----AHV--------SSFTYAASSSTYGDH  148 (348)
T ss_pred             -----CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----cCC--------CeEEEeechHhhCCC
Confidence                 4899999999643211    2223456789999999999988753    222        469999987544211


Q ss_pred             -----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-----CChHHHHHHhhh-hcc
Q 024976          164 -----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----LAPEEIRSKATD-YMA  226 (259)
Q Consensus       164 -----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-----~~~~~~~~~~~~-~~~  226 (259)
                                 .+...|+.+|.+.+.+++.++.++    |+++..+.|+.+..|.....     +.+......... ..+
T Consensus       149 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~  224 (348)
T PRK15181        149 PDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY----EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIY  224 (348)
T ss_pred             CCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh----CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcE
Confidence                       133579999999999888776543    59999999999987653221     112212121111 111


Q ss_pred             -------CCCCCCHHHHHHHHHHhcC
Q 024976          227 -------AYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       227 -------~~~~~~~~dva~~~~~l~s  245 (259)
                             ..-+...+|++++++.++.
T Consensus       225 ~~g~g~~~rd~i~v~D~a~a~~~~~~  250 (348)
T PRK15181        225 INGDGSTSRDFCYIENVIQANLLSAT  250 (348)
T ss_pred             EeCCCCceEeeEEHHHHHHHHHHHHh
Confidence                   1125679999999887663

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.79  E-value=2.7e-17  Score=134.89  Aligned_cols=202  Identities=15%  Similarity=0.073  Sum_probs=132.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCH-HHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~~~~~~   87 (259)
                      ..++++++||||+|+||++++++|+++|++|+++.|+.+.......    .+.++.++.+|+++. +++.   +.+.   
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~---~~~~---   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLV---EAIG---   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHH---HHhh---
Confidence            4567899999999999999999999999999999998765433221    133688999999983 3322   2220   


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---cCc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---ATW  164 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---~~~  164 (259)
                      .++|+||+++|......    .    ...+++|..+..++++++.    +.+.        ++||++||...+.   +.+
T Consensus        84 ~~~d~vi~~~g~~~~~~----~----~~~~~~n~~~~~~ll~a~~----~~~~--------~~iV~iSS~~v~g~~~~~~  143 (251)
T PLN00141         84 DDSDAVICATGFRRSFD----P----FAPWKVDNFGTVNLVEACR----KAGV--------TRFILVSSILVNGAAMGQI  143 (251)
T ss_pred             cCCCEEEECCCCCcCCC----C----CCceeeehHHHHHHHHHHH----HcCC--------CEEEEEccccccCCCcccc
Confidence            26999999998632111    0    1224688888888888864    3332        7899999986432   222


Q ss_pred             cchhhHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e--~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ....|...|.+...+...+..|  +. ..|++++.|+||++.++........      .....+...+.+++|+|+.+..
T Consensus       144 ~~~~~~~~~~~~~~~~~k~~~e~~l~-~~gi~~~iirpg~~~~~~~~~~~~~------~~~~~~~~~~i~~~dvA~~~~~  216 (251)
T PLN00141        144 LNPAYIFLNLFGLTLVAKLQAEKYIR-KSGINYTIVRPGGLTNDPPTGNIVM------EPEDTLYEGSISRDQVAEVAVE  216 (251)
T ss_pred             cCcchhHHHHHHHHHHHHHHHHHHHH-hcCCcEEEEECCCccCCCCCceEEE------CCCCccccCcccHHHHHHHHHH
Confidence            3455776665544443333333  44 6789999999999975432211100      0000111235799999999999


Q ss_pred             hcCcc
Q 024976          243 LASDA  247 (259)
Q Consensus       243 l~s~~  247 (259)
                      ++...
T Consensus       217 ~~~~~  221 (251)
T PLN00141        217 ALLCP  221 (251)
T ss_pred             HhcCh
Confidence            97543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.78  E-value=2.4e-17  Score=143.40  Aligned_cols=173  Identities=25%  Similarity=0.285  Sum_probs=144.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..+.||+++||||+|.||+++|+++++.+.+ +++++|++.++.....+++..  ..+..++.+|+.|.+.++.+++.. 
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            3589999999999999999999999999885 889999999999999999864  457889999999999999999854 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                          ++|+|+|+|+.=+ -|+-+   ....+.+.+|++|+.++++++...-.+            ++|.+|+.-+..|  
T Consensus       325 ----kvd~VfHAAA~KH-VPl~E---~nP~Eai~tNV~GT~nv~~aa~~~~V~------------~~V~iSTDKAV~P--  382 (588)
T COG1086         325 ----KVDIVFHAAALKH-VPLVE---YNPEEAIKTNVLGTENVAEAAIKNGVK------------KFVLISTDKAVNP--  382 (588)
T ss_pred             ----CCceEEEhhhhcc-Ccchh---cCHHHHHHHhhHhHHHHHHHHHHhCCC------------EEEEEecCcccCC--
Confidence                6999999999522 12222   335678899999999999999875443            4999999866655  


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccC
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  205 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t  205 (259)
                       ...|++||...+.++.+++.... ..+-++.++.-|.|..
T Consensus       383 -tNvmGaTKr~aE~~~~a~~~~~~-~~~T~f~~VRFGNVlG  421 (588)
T COG1086         383 -TNVMGATKRLAEKLFQAANRNVS-GTGTRFCVVRFGNVLG  421 (588)
T ss_pred             -chHhhHHHHHHHHHHHHHhhccC-CCCcEEEEEEecceec
Confidence             45799999999999999998765 4478999999888863

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=4.1e-17  Score=131.08  Aligned_cols=208  Identities=21%  Similarity=0.137  Sum_probs=151.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCC--hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRR--KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +++|||||+|.||.++++.+.++..  +|+.+|.-  ...++.+ +.+. ..++..|+++|+.|.+.+.+++++-     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~-~~~~~~fv~~DI~D~~~v~~~~~~~-----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVE-DSPRYRFVQGDICDRELVDRLFKEY-----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhh-cCCCceEEeccccCHHHHHHHHHhc-----
Confidence            4789999999999999999998865  36766642  1122222 2222 2457999999999999999999864     


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc---------
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH---------  159 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~---------  159 (259)
                      .+|+++|-|+-.+    .|.+.++...++++|+.|++.+++++..+..+           -+++.+|.--.         
T Consensus        74 ~~D~VvhfAAESH----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-----------frf~HISTDEVYG~l~~~~~  138 (340)
T COG1088          74 QPDAVVHFAAESH----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-----------FRFHHISTDEVYGDLGLDDD  138 (340)
T ss_pred             CCCeEEEechhcc----ccccccChhhhhhcchHHHHHHHHHHHHhccc-----------ceEEEeccccccccccCCCC
Confidence            6999999999544    34466677889999999999999999988753           24777776332         


Q ss_pred             ----cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-CChHHHHHHhh-hhcc-------
Q 024976          160 ----YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKAT-DYMA-------  226 (259)
Q Consensus       160 ----~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~-~~~~-------  226 (259)
                          ..|..+.+.|++|||+...|+|++...|+    +.+....+..-..|.+... +.|......+. ...|       
T Consensus       139 ~FtE~tp~~PsSPYSASKAasD~lVray~~TYg----lp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~  214 (340)
T COG1088         139 AFTETTPYNPSSPYSASKAASDLLVRAYVRTYG----LPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQ  214 (340)
T ss_pred             CcccCCCCCCCCCcchhhhhHHHHHHHHHHHcC----CceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcc
Confidence                23456778899999999999999998775    8999998887777664433 22333322222 2222       


Q ss_pred             CCCCCCHHHHHHHHHHhcCc
Q 024976          227 AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~  246 (259)
                      .+.|...+|-++++...+..
T Consensus       215 iRDWl~VeDh~~ai~~Vl~k  234 (340)
T COG1088         215 IRDWLYVEDHCRAIDLVLTK  234 (340)
T ss_pred             eeeeEEeHhHHHHHHHHHhc
Confidence            23367788989888887754

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.77  E-value=1.3e-16  Score=136.27  Aligned_cols=168  Identities=18%  Similarity=0.145  Sum_probs=121.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +++||||+|+||++++++|+++|++|++++|..+........+... +.++.++.+|++|.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            6999999999999999999999999999876533333222223222 34577889999999998888763     36999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------  163 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  163 (259)
                      |||+|+......    ..+.....+++|+.++.++++++.    +.+.        +++|++||...+...         
T Consensus        77 vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--------~~~v~~Ss~~~yg~~~~~~~~E~~  140 (338)
T PRK10675         77 VIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AANV--------KNLIFSSSATVYGDQPKIPYVESF  140 (338)
T ss_pred             EEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcCC--------CEEEEeccHHhhCCCCCCcccccc
Confidence            999999643221    123345678899999999987654    3332        579999997543210         


Q ss_pred             ---ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccC
Q 024976          164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  205 (259)
Q Consensus       164 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t  205 (259)
                         .+...|+.+|.+.+.+++.++.+..   ++++..+.|+.+..
T Consensus       141 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~ilR~~~v~g  182 (338)
T PRK10675        141 PTGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVG  182 (338)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhcC---CCcEEEEEeeeecC
Confidence               2357899999999999999876542   47777777665554

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.76  E-value=6.3e-17  Score=137.52  Aligned_cols=199  Identities=19%  Similarity=0.153  Sum_probs=140.6

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++||||+|+||+.+++.|+++|++|++++|+.+....    +.  ...+.++.+|++|.+++.++++       .+|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~   67 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE--GLDVEIVEGDLRDPASLRKAVA-------GCRA   67 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc--cCCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            479999999999999999999999999999998654322    11  2257889999999998888765       5899


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc--------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--------  164 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  164 (259)
                      |||+++....      ..++++..+++|+.++.++++++...    +.        +++|++||...+.+..        
T Consensus        68 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~--------~~~v~~SS~~~~~~~~~~~~~~e~  129 (328)
T TIGR03466        68 LFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALEA----GV--------ERVVYTSSVATLGVRGDGTPADET  129 (328)
T ss_pred             EEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHHh----CC--------CeEEEEechhhcCcCCCCCCcCcc
Confidence            9999985321      11235677889999999998887642    22        5799999976553211        


Q ss_pred             -------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHH-HHHhhhhccC-----CCCC
Q 024976          165 -------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAA-----YKFG  231 (259)
Q Consensus       165 -------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~-----~~~~  231 (259)
                             ....|+.+|.+.+.+++.++.++    |+++..++|+.+..+........... ........+.     ..+.
T Consensus       130 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  205 (328)
T TIGR03466       130 TPSSLDDMIGHYKRSKFLAEQAALEMAAEK----GLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLV  205 (328)
T ss_pred             CCCCcccccChHHHHHHHHHHHHHHHHHhc----CCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceE
Confidence                   13469999999999999876643    58999999999876543222111111 1111111111     1256


Q ss_pred             CHHHHHHHHHHhcCc
Q 024976          232 EKWDIAMAALYLASD  246 (259)
Q Consensus       232 ~~~dva~~~~~l~s~  246 (259)
                      ..+|+++++..++..
T Consensus       206 ~v~D~a~a~~~~~~~  220 (328)
T TIGR03466       206 HVDDVAEGHLLALER  220 (328)
T ss_pred             EHHHHHHHHHHHHhC
Confidence            799999998887754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.75  E-value=8.3e-18  Score=137.51  Aligned_cols=202  Identities=20%  Similarity=0.195  Sum_probs=140.4

Q ss_pred             EEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhc--CCCeE----EEEcCCCCHHHHHHHHHHHHHHc
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL--GIPAI----GLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~--~~~v~----~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +|||||+|.||++++++|++.+. +++++++++..+-.+..++...  +.++.    .+.+|++|.+.+++++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999986 5999999999999999888532  23343    4589999999999998754    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                       ++|+|+|.|+.=+. ++.+   +...+.+++|+.|+.++++++..+-.            .++|++|+--+..|   ..
T Consensus        77 -~pdiVfHaAA~KhV-pl~E---~~p~eav~tNv~GT~nv~~aa~~~~v------------~~~v~ISTDKAv~P---tn  136 (293)
T PF02719_consen   77 -KPDIVFHAAALKHV-PLME---DNPFEAVKTNVLGTQNVAEAAIEHGV------------ERFVFISTDKAVNP---TN  136 (293)
T ss_dssp             -T-SEEEE------H-HHHC---CCHHHHHHHHCHHHHHHHHHHHHTT-------------SEEEEEEECGCSS-----S
T ss_pred             -CCCEEEEChhcCCC-ChHH---hCHHHHHHHHHHHHHHHHHHHHHcCC------------CEEEEccccccCCC---Cc
Confidence             79999999995221 1112   23467899999999999999987532            45999999866554   46


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccC--------CCCCCHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--------YKFGEKWDIAMA  239 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~  239 (259)
                      .|++||...+.++.+++...+ ..+.++.+++-|.|...   ....-+-+.+++.+.-|.        +.+.+++|.++.
T Consensus       137 vmGatKrlaE~l~~~~~~~~~-~~~t~f~~VRFGNVlgS---~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~L  212 (293)
T PF02719_consen  137 VMGATKRLAEKLVQAANQYSG-NSDTKFSSVRFGNVLGS---RGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQL  212 (293)
T ss_dssp             HHHHHHHHHHHHHHHHCCTSS-SS--EEEEEEE-EETTG---TTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCC-CCCcEEEEEEecceecC---CCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHH
Confidence            799999999999999988875 66799999999999632   222334444444444332        225677787777


Q ss_pred             HHHhc
Q 024976          240 ALYLA  244 (259)
Q Consensus       240 ~~~l~  244 (259)
                      ++..+
T Consensus       213 vl~a~  217 (293)
T PF02719_consen  213 VLQAA  217 (293)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77655

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.74  E-value=4.8e-17  Score=141.56  Aligned_cols=211  Identities=11%  Similarity=0.021  Sum_probs=140.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..++.++++||||+|.||++++++|+++ |++|++++|+.+.......... ....++.++.+|++|.+.+.++++    
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~----   85 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK----   85 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh----
Confidence            4567789999999999999999999998 5899999987654333221100 112368899999999998887765    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--  163 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  163 (259)
                         .+|+|||+|+......... +   -...+..|+.+..++++++...    +         .++|++||...+...  
T Consensus        86 ---~~d~ViHlAa~~~~~~~~~-~---~~~~~~~n~~gt~~ll~aa~~~----~---------~r~v~~SS~~vYg~~~~  145 (386)
T PLN02427         86 ---MADLTINLAAICTPADYNT-R---PLDTIYSNFIDALPVVKYCSEN----N---------KRLIHFSTCEVYGKTIG  145 (386)
T ss_pred             ---cCCEEEEcccccChhhhhh-C---hHHHHHHHHHHHHHHHHHHHhc----C---------CEEEEEeeeeeeCCCcC
Confidence               4899999999653322211 1   1234567999999998877532    1         459999986533210  


Q ss_pred             -------------------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-
Q 024976          164 -------------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-  211 (259)
Q Consensus       164 -------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-  211 (259)
                                                     .+...|+.+|.+.+.+++.++..    .|+++..++|+.+..+..... 
T Consensus       146 ~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilR~~~vyGp~~~~~~  221 (386)
T PLN02427        146 SFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE----NGLEFTIVRPFNWIGPRMDFIP  221 (386)
T ss_pred             CCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh----cCCceEEecccceeCCCCCccc
Confidence                                           01135999999999988866543    469999999999987653210 


Q ss_pred             -------CChH---HHHHHhhhhcc---------CCCCCCHHHHHHHHHHhcCc
Q 024976          212 -------LAPE---EIRSKATDYMA---------AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       212 -------~~~~---~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~  246 (259)
                             ..+.   .....+....+         ..-+...+|++++++.++..
T Consensus       222 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~  275 (386)
T PLN02427        222 GIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIEN  275 (386)
T ss_pred             cccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhC
Confidence                   0011   11111111111         11367899999999988754

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.73  E-value=6.5e-16  Score=133.04  Aligned_cols=204  Identities=18%  Similarity=0.117  Sum_probs=136.2

Q ss_pred             EEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhH---HHHHHHHHhcC--------CCeEEEEcCCCCHH------
Q 024976           14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVL---RSAVAALHSLG--------IPAIGLEGDVRKRE------   74 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~---~~~~~~~~~~~--------~~v~~~~~Dl~~~~------   74 (259)
                      +++||||+|+||++++++|+++|  ++|+++.|+.+..   +.+.+.+....        .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  6799998876522   22333332211        46899999998653      


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 024976           75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI  154 (259)
Q Consensus        75 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i  154 (259)
                      ....+.       ..+|++||||+.....       ..++...++|+.++..+++++...    +.        .+++++
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~~----~~--------~~~v~i  134 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAASG----RA--------KPLHYV  134 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhhC----CC--------ceEEEE
Confidence            322222       4699999999964321       234567789999999998877542    21        459999


Q ss_pred             ccccccccC----------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHH
Q 024976          155 SATLHYTAT----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR  218 (259)
Q Consensus       155 sS~~~~~~~----------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~  218 (259)
                      ||...+...                .....|+.+|.+.+.+++.++     ..|++++.++||.+.++............
T Consensus       135 SS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~  209 (367)
T TIGR01746       135 STISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS-----DRGLPVTIVRPGRILGNSYTGAINSSDIL  209 (367)
T ss_pred             ccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHH-----hcCCCEEEECCCceeecCCCCCCCchhHH
Confidence            998765431                112469999999998887643     33799999999999865322222222111


Q ss_pred             -HHh-----hhhccC-----CCCCCHHHHHHHHHHhcCccC
Q 024976          219 -SKA-----TDYMAA-----YKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       219 -~~~-----~~~~~~-----~~~~~~~dva~~~~~l~s~~~  248 (259)
                       ..+     ....|.     ..+...+|++++++.++....
T Consensus       210 ~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~  250 (367)
T TIGR01746       210 WRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPA  250 (367)
T ss_pred             HHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCC
Confidence             111     111221     126778999999999886544

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.73  E-value=2e-16  Score=128.14  Aligned_cols=204  Identities=20%  Similarity=0.163  Sum_probs=147.5

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV   94 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li   94 (259)
                      |+||||+|.||.+++++|.++|+.|+.+.|+...........     ++.++.+|+.|.+.++++++..     .+|.||
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi   70 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI   70 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence            699999999999999999999999887777655433222221     6899999999999999999876     799999


Q ss_pred             ECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----------
Q 024976           95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------  163 (259)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  163 (259)
                      |+|+....    ..+.++....++.|+.+..++++++...-.            .++|++||...+...           
T Consensus        71 ~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~------------~~~i~~sS~~~y~~~~~~~~~e~~~~  134 (236)
T PF01370_consen   71 HLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAAREAGV------------KRFIFLSSASVYGDPDGEPIDEDSPI  134 (236)
T ss_dssp             EEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHHHTT------------SEEEEEEEGGGGTSSSSSSBETTSGC
T ss_pred             Eeeccccc----cccccccccccccccccccccccccccccc------------cccccccccccccccccccccccccc
Confidence            99996321    112245677888898888888888775321            469999996543322           


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc---ccCCCChHHHHHHhhhhcc----C-----CCCC
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA---GVSKLAPEEIRSKATDYMA----A-----YKFG  231 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~---~~~~~~~~~~~~~~~~~~~----~-----~~~~  231 (259)
                      .+...|+.+|...+.+.+.+..+.    ++++..+.|+.+..+.   ......-...........+    .     ..+.
T Consensus       135 ~~~~~Y~~~K~~~e~~~~~~~~~~----~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  210 (236)
T PF01370_consen  135 NPLSPYGASKRAAEELLRDYAKKY----GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFI  210 (236)
T ss_dssp             CHSSHHHHHHHHHHHHHHHHHHHH----TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEE
T ss_pred             cccccccccccccccccccccccc----ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceE
Confidence            234569999999999999988765    4999999999999776   1112112233333322221    1     1246


Q ss_pred             CHHHHHHHHHHhcCccC
Q 024976          232 EKWDIAMAALYLASDAA  248 (259)
Q Consensus       232 ~~~dva~~~~~l~s~~~  248 (259)
                      ..+|++++++.++....
T Consensus       211 ~v~D~a~~~~~~~~~~~  227 (236)
T PF01370_consen  211 HVDDLAEAIVAALENPK  227 (236)
T ss_dssp             EHHHHHHHHHHHHHHSC
T ss_pred             EHHHHHHHHHHHHhCCC
Confidence            68999999999987654

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.73  E-value=1.8e-16  Score=128.02  Aligned_cols=158  Identities=23%  Similarity=0.146  Sum_probs=123.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +++|||||+|=||++++.+|++.|++|+++|.-.....+......     +.+++.|+.|.+.++++|++.     +||.
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~~-----~ida   70 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEEN-----KIDA   70 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHhc-----CCCE
Confidence            479999999999999999999999999999876554333333221     679999999999999999875     7999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-----------c
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----------T  161 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~  161 (259)
                      |||.||...-+    .+.++..+.++.|+.+++.|++++...-.            -.|||-||.+.+           .
T Consensus        71 ViHFAa~~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv------------~~~vFSStAavYG~p~~~PI~E~~  134 (329)
T COG1087          71 VVHFAASISVG----ESVQNPLKYYDNNVVGTLNLIEAMLQTGV------------KKFIFSSTAAVYGEPTTSPISETS  134 (329)
T ss_pred             EEECccccccc----hhhhCHHHHHhhchHhHHHHHHHHHHhCC------------CEEEEecchhhcCCCCCcccCCCC
Confidence            99999954333    35566789999999999999888876532            348877766543           2


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  200 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~p  200 (259)
                      +..+...|+.||...+.+.+.+++-+    +.++..++-
T Consensus       135 ~~~p~NPYG~sKlm~E~iL~d~~~a~----~~~~v~LRY  169 (329)
T COG1087         135 PLAPINPYGRSKLMSEEILRDAAKAN----PFKVVILRY  169 (329)
T ss_pred             CCCCCCcchhHHHHHHHHHHHHHHhC----CCcEEEEEe
Confidence            23345579999999999999998854    377777753

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.72  E-value=2.5e-16  Score=130.75  Aligned_cols=201  Identities=16%  Similarity=0.100  Sum_probs=138.2

Q ss_pred             EEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           16 LLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        16 lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      |||||+|.||++++++|.++|  .+|.+++++.....  ...+... ....++.+|++|.+++.++++       ++|+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-cceeEEEeccccHHHHHHHhc-------CCceE
Confidence            699999999999999999999  67888887765322  1122211 123489999999999999886       68999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---C-------
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---T-------  163 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---~-------  163 (259)
                      ||+|+......     ....+..+++|+.|+-++++++...    +-        .++|++||.....+   .       
T Consensus        71 ~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~----~V--------krlVytSS~~vv~~~~~~~~~~~~d  133 (280)
T PF01073_consen   71 FHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA----GV--------KRLVYTSSISVVFDNYKGDPIINGD  133 (280)
T ss_pred             EEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEEcCcceeEeccCCCCcccCC
Confidence            99999654322     2345788999999999999998753    22        56999999886544   1       


Q ss_pred             -------ccchhhHHHHHHHHHHHHHHHH-HhcCCCCeEEEEEecccccCCcccCCCCh-HHHHHHhhhhccC------C
Q 024976          164 -------WYQIHVSAAKAAVDSITRSLAL-EWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAA------Y  228 (259)
Q Consensus       164 -------~~~~~Y~~sK~a~~~l~~~la~-e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~------~  228 (259)
                             .....|+.||+..+.++..... ++.....+++.+|+|..|..|........ .+..+.-......      .
T Consensus       134 E~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~  213 (280)
T PF01073_consen  134 EDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLF  213 (280)
T ss_pred             cCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceE
Confidence                   1334799999999999887655 22212359999999999987643222211 1111111001111      1


Q ss_pred             CCCCHHHHHHHHHHh
Q 024976          229 KFGEKWDIAMAALYL  243 (259)
Q Consensus       229 ~~~~~~dva~~~~~l  243 (259)
                      -+...+++|.+.+..
T Consensus       214 ~~vyV~NvA~ahvlA  228 (280)
T PF01073_consen  214 DFVYVENVAHAHVLA  228 (280)
T ss_pred             CcEeHHHHHHHHHHH
Confidence            256799999987654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.71  E-value=5.2e-16  Score=131.71  Aligned_cols=168  Identities=19%  Similarity=0.109  Sum_probs=123.8

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||+|+||++++++|.++|++|++++|...........+...+ ++.++.+|+++.+++.++++.     +++|++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   74 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT-RVTFVEGDLRDRELLDRLFEE-----HKIDAV   74 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc-ceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence            47999999999999999999999999888764333222222222212 577889999999999988763     479999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----------
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------  163 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  163 (259)
                      ||+||.....+    ..++..+.++.|+.++..+++++..    .+.        .++|++||...+...          
T Consensus        75 v~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--------~~~v~~ss~~~~g~~~~~~~~e~~~  138 (328)
T TIGR01179        75 IHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQQ----TGV--------KKFIFSSSAAVYGEPSSIPISEDSP  138 (328)
T ss_pred             EECccccCcch----hhcCchhhhhhhHHHHHHHHHHHHh----cCC--------CEEEEecchhhcCCCCCCCccccCC
Confidence            99999653322    2234456788999999999887643    222        579998886543211          


Q ss_pred             -ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCC
Q 024976          164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  206 (259)
Q Consensus       164 -~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~  206 (259)
                       .+...|+.+|++.+.+++.++.+.   .++++..+.|+.+..+
T Consensus       139 ~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       139 LGPINPYGRSKLMSERILRDLSKAD---PGLSYVILRYFNVAGA  179 (328)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHhc---cCCCEEEEecCcccCC
Confidence             234679999999999999987752   3689999999888765

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.69  E-value=3e-15  Score=129.48  Aligned_cols=205  Identities=18%  Similarity=0.064  Sum_probs=139.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -++++++||||+|.||+++++.|.++|++|++++|......      ......+.++.+|+++.+.+..+++       .
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   85 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVTK-------G   85 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHHh-------C
Confidence            36789999999999999999999999999999998643211      1111125678899999888766653       5


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------  161 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  161 (259)
                      +|+|||+|+......+...   +....+..|+.++.++++++...    +.        .++|++||...+.        
T Consensus        86 ~D~Vih~Aa~~~~~~~~~~---~~~~~~~~N~~~t~nll~aa~~~----~v--------k~~V~~SS~~vYg~~~~~~~~  150 (370)
T PLN02695         86 VDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAARIN----GV--------KRFFYASSACIYPEFKQLETN  150 (370)
T ss_pred             CCEEEEcccccCCcccccc---CchhhHHHHHHHHHHHHHHHHHh----CC--------CEEEEeCchhhcCCccccCcC
Confidence            8999999986432222111   12345678999999998887532    22        5699999864321        


Q ss_pred             ---------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC----CCChHHHHHHhhh---hc
Q 024976          162 ---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATD---YM  225 (259)
Q Consensus       162 ---------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~----~~~~~~~~~~~~~---~~  225 (259)
                               +..+...|+.+|.+.+.+++.++..+    |+++..+.|+.+..|....    ...+..+......   .+
T Consensus       151 ~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~----g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (370)
T PLN02695        151 VSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF----GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEF  226 (370)
T ss_pred             CCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCe
Confidence                     22345589999999999998876654    5999999999998764321    1112233322211   11


Q ss_pred             c-------CCCCCCHHHHHHHHHHhcCc
Q 024976          226 A-------AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       226 ~-------~~~~~~~~dva~~~~~l~s~  246 (259)
                      +       ...+...+|++++++.++..
T Consensus       227 ~~~g~g~~~r~~i~v~D~a~ai~~~~~~  254 (370)
T PLN02695        227 EMWGDGKQTRSFTFIDECVEGVLRLTKS  254 (370)
T ss_pred             EEeCCCCeEEeEEeHHHHHHHHHHHHhc
Confidence            1       11257899999999987754

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.69  E-value=2.3e-15  Score=139.68  Aligned_cols=212  Identities=14%  Similarity=0.075  Sum_probs=143.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHc--CCeEEEEeCCh--hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~--G~~vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..++|++|||||+|.||++++++|.++  |++|+.+++..  +........  ....++.++.+|++|.+.+++++..  
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~--   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT--   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh--
Confidence            356899999999999999999999998  57888888742  122211111  1134688999999999887776532  


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--  162 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  162 (259)
                         .++|+|||+|+.....    ...++....+++|+.++..+++++...   ...        .++|++||...+..  
T Consensus        79 ---~~~D~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~v--------kr~I~~SS~~vyg~~~  140 (668)
T PLN02260         79 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQI--------RRFIHVSTDEVYGETD  140 (668)
T ss_pred             ---cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhc---CCC--------cEEEEEcchHHhCCCc
Confidence               3799999999964322    112233567789999999998887532   111        57999999654321  


Q ss_pred             ------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhh--hccC-
Q 024976          163 ------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD--YMAA-  227 (259)
Q Consensus       163 ------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~-  227 (259)
                                  ..+...|+.+|.+.+.+++.+..++    ++++..++|+.+..+.......-..+......  ..+. 
T Consensus       141 ~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~----~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~  216 (668)
T PLN02260        141 EDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIH  216 (668)
T ss_pred             cccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEe
Confidence                        1124569999999999999877654    48999999999987654322111112121111  1111 


Q ss_pred             ------CCCCCHHHHHHHHHHhcCc
Q 024976          228 ------YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       228 ------~~~~~~~dva~~~~~l~s~  246 (259)
                            .-+...+|+++++..++..
T Consensus       217 g~g~~~r~~ihV~Dva~a~~~~l~~  241 (668)
T PLN02260        217 GDGSNVRSYLYCEDVAEAFEVVLHK  241 (668)
T ss_pred             cCCCceEeeEEHHHHHHHHHHHHhc
Confidence                  1256799999999888743

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.68  E-value=4.8e-15  Score=127.22  Aligned_cols=201  Identities=17%  Similarity=0.091  Sum_probs=135.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCC-CHHHHHHHHHHHHHHcCCc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINHFGKL   90 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++++||||+|.||++++++|+++ |++|++++|+.+....    +.. ...+.++.+|++ +.+.+.++++       ++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~   69 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN-HPRMHFFEGDITINKEWIEYHVK-------KC   69 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc-CCCeEEEeCCCCCCHHHHHHHHc-------CC
Confidence            47999999999999999999986 6899999986543221    111 235889999998 6666655543       58


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------  163 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  163 (259)
                      |+|||+|+......    ..++.+..+++|+.++.++++++...    +         .++|++||...+...       
T Consensus        70 d~ViH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~~~----~---------~~~v~~SS~~vyg~~~~~~~~e  132 (347)
T PRK11908         70 DVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVKY----G---------KHLVFPSTSEVYGMCPDEEFDP  132 (347)
T ss_pred             CEEEECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHHHhc----C---------CeEEEEecceeeccCCCcCcCc
Confidence            99999999643321    11233567789999999998887632    1         359999987543210       


Q ss_pred             -----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC--------ChHHHHHHhhhh
Q 024976          164 -----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------APEEIRSKATDY  224 (259)
Q Consensus       164 -----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~--------~~~~~~~~~~~~  224 (259)
                                 .+...|+.+|.+.+.+.+.++.+.    |+.+..+.|+.+..+......        .-......+...
T Consensus       133 e~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~  208 (347)
T PRK11908        133 EASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRG  208 (347)
T ss_pred             cccccccCcCCCccchHHHHHHHHHHHHHHHHHHc----CCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCC
Confidence                       112269999999999999877643    588888999888765432110        011222111111


Q ss_pred             ---------ccCCCCCCHHHHHHHHHHhcCc
Q 024976          225 ---------MAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       225 ---------~~~~~~~~~~dva~~~~~l~s~  246 (259)
                               .+...+...+|++++++.++..
T Consensus       209 ~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~  239 (347)
T PRK11908        209 EPISLVDGGSQKRAFTDIDDGIDALMKIIEN  239 (347)
T ss_pred             CceEEecCCceeeccccHHHHHHHHHHHHhC
Confidence                     1122378899999999998864

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.67  E-value=8.7e-16  Score=142.02  Aligned_cols=206  Identities=14%  Similarity=0.062  Sum_probs=140.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHH-HHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~-~~~~~~~~~~   85 (259)
                      ...++++++||||+|.||++++++|.++ |++|+.++|+......    ... ..++.++.+|++|... ++++++    
T Consensus       311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~-~~~~~~~~gDl~d~~~~l~~~l~----  381 (660)
T PRK08125        311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG-HPRFHFVEGDISIHSEWIEYHIK----  381 (660)
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC-CCceEEEeccccCcHHHHHHHhc----
Confidence            3467889999999999999999999986 7999999987643221    111 2358889999998655 344432    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--  163 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  163 (259)
                         ++|+|||+|+........    ++.+..+++|+.++.++++++...    +         .++|++||...+...  
T Consensus       382 ---~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~~~----~---------~~~V~~SS~~vyg~~~~  441 (660)
T PRK08125        382 ---KCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCVKY----N---------KRIIFPSTSEVYGMCTD  441 (660)
T ss_pred             ---CCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHHhc----C---------CeEEEEcchhhcCCCCC
Confidence               699999999965432211    223457889999999999998743    1         359999996533210  


Q ss_pred             ----------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC----CC----hHHHHH
Q 024976          164 ----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LA----PEEIRS  219 (259)
Q Consensus       164 ----------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~----~~----~~~~~~  219 (259)
                                      .+...|+.||.+.+.+++.++.++    |+++..+.|+.+..+.....    ..    -.....
T Consensus       442 ~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~----g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~  517 (660)
T PRK08125        442 KYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE----GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL  517 (660)
T ss_pred             CCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc----CCceEEEEEceeeCCCccccccccccccchHHHHHH
Confidence                            112369999999999999886654    58999999999987643210    00    111111


Q ss_pred             Hhhhhc---------cCCCCCCHHHHHHHHHHhcCc
Q 024976          220 KATDYM---------AAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       220 ~~~~~~---------~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ......         ...-+...+|++++++.++..
T Consensus       518 ~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~  553 (660)
T PRK08125        518 NLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIEN  553 (660)
T ss_pred             HhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhc
Confidence            111111         112267899999999888754

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.67  E-value=6.9e-15  Score=124.18  Aligned_cols=202  Identities=15%  Similarity=0.094  Sum_probs=141.1

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc-cE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL-DI   92 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i-d~   92 (259)
                      .+|||||+|.||++++++|.++|++|+.++|.........       ..+.++.+|+++.+.+.+.++       .. |.
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~-------~~~d~   67 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK-------GVPDA   67 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh-------cCCCE
Confidence            3999999999999999999999999999998766433322       357889999999966555554       33 99


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------  163 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  163 (259)
                      +||+|+........  .. +....+++|+.++.++++++..    .+.        .++|+.||...+.+.         
T Consensus        68 vih~aa~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa~~----~~~--------~~~v~~ss~~~~~~~~~~~~~~E~  132 (314)
T COG0451          68 VIHLAAQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAARA----AGV--------KRFVFASSVSVVYGDPPPLPIDED  132 (314)
T ss_pred             EEEccccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHHHH----cCC--------CeEEEeCCCceECCCCCCCCcccc
Confidence            99999965432111  11 3456889999999999999976    222        568887665533321         


Q ss_pred             --ccch--hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---CChHHHHHHhhhhcc---C------
Q 024976          164 --WYQI--HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---LAPEEIRSKATDYMA---A------  227 (259)
Q Consensus       164 --~~~~--~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---~~~~~~~~~~~~~~~---~------  227 (259)
                        +..+  .|+.+|...+.+++....+.    |+.+..+.|+.+..+.....   ..............+   .      
T Consensus       133 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~~----~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (314)
T COG0451         133 LGPPRPLNPYGVSKLAAEQLLRAYARLY----GLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQ  208 (314)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCce
Confidence              1111  49999999999999888733    58999999998887665444   122222222222222   1      


Q ss_pred             -CCCCCHHHHHHHHHHhcCccC
Q 024976          228 -YKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       228 -~~~~~~~dva~~~~~l~s~~~  248 (259)
                       .-+...+|+++++..++....
T Consensus       209 ~~~~i~v~D~a~~~~~~~~~~~  230 (314)
T COG0451         209 TRDFVYVDDVADALLLALENPD  230 (314)
T ss_pred             eEeeEeHHHHHHHHHHHHhCCC
Confidence             125668999999999987543

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.66  E-value=7e-15  Score=124.14  Aligned_cols=199  Identities=14%  Similarity=0.094  Sum_probs=129.8

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH--HcCCccE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--HFGKLDI   92 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~--~~g~id~   92 (259)
                      ++||||+|.||++++++|+++|++++++.|+....... .         .+..+|+.|..+.+.+++++.+  .++++|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~   71 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V---------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEA   71 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H---------hhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence            79999999999999999999999766655443321111 0         1234677777666666655542  3457999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------  162 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  162 (259)
                      |||+|+......   .+.   ...++.|+.++.++++++...    +         .++|++||...+..          
T Consensus        72 Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~~~----~---------~~~i~~SS~~vyg~~~~~~~~E~~  132 (308)
T PRK11150         72 IFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCLER----E---------IPFLYASSAATYGGRTDDFIEERE  132 (308)
T ss_pred             EEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHHHc----C---------CcEEEEcchHHhCcCCCCCCccCC
Confidence            999999543221   122   346899999999998887532    1         35999999754321          


Q ss_pred             -CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-CChH---HHHHHhh-hh---cc------C
Q 024976          163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPE---EIRSKAT-DY---MA------A  227 (259)
Q Consensus       163 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-~~~~---~~~~~~~-~~---~~------~  227 (259)
                       ..+...|+.+|.+.+.+.+.+..+    .++++..+.|+.+..+..... ..+.   .+..... ..   ..      .
T Consensus       133 ~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~  208 (308)
T PRK11150        133 YEKPLNVYGYSKFLFDEYVRQILPE----ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFK  208 (308)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH----cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCcee
Confidence             123457999999999998877654    358999999998887643221 1111   1111111 11   11      1


Q ss_pred             CCCCCHHHHHHHHHHhcCc
Q 024976          228 YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~  246 (259)
                      ..+...+|++++++.++..
T Consensus       209 r~~i~v~D~a~a~~~~~~~  227 (308)
T PRK11150        209 RDFVYVGDVAAVNLWFWEN  227 (308)
T ss_pred             eeeeeHHHHHHHHHHHHhc
Confidence            1256899999998888754

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.65  E-value=5.9e-15  Score=128.32  Aligned_cols=201  Identities=17%  Similarity=0.060  Sum_probs=135.4

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH--HHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +..+.++++++||||+|+||++++++|+++|++|+++.|+.+..+.  ..++......++.++.+|++|.+++.++++..
T Consensus        54 ~~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~  133 (390)
T PLN02657         54 RSKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE  133 (390)
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh
Confidence            3445678899999999999999999999999999999998754321  11222222346889999999999999988753


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .   +++|+||||++.....         ....+++|+.+..++++++.    +.+.        +++|++||.....+ 
T Consensus       134 ~---~~~D~Vi~~aa~~~~~---------~~~~~~vn~~~~~~ll~aa~----~~gv--------~r~V~iSS~~v~~p-  188 (390)
T PLN02657        134 G---DPVDVVVSCLASRTGG---------VKDSWKIDYQATKNSLDAGR----EVGA--------KHFVLLSAICVQKP-  188 (390)
T ss_pred             C---CCCcEEEECCccCCCC---------CccchhhHHHHHHHHHHHHH----HcCC--------CEEEEEeeccccCc-
Confidence            1   2699999999842211         11234567778777777764    3332        67999999876533 


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc---C--C-----CCCCH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA---A--Y-----KFGEK  233 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---~--~-----~~~~~  233 (259)
                        ...|..+|...+...+.     . ..|++...++|+.+..+. .     . .........+   .  +     .+.+.
T Consensus       189 --~~~~~~sK~~~E~~l~~-----~-~~gl~~tIlRp~~~~~~~-~-----~-~~~~~~~g~~~~~~GdG~~~~~~~I~v  253 (390)
T PLN02657        189 --LLEFQRAKLKFEAELQA-----L-DSDFTYSIVRPTAFFKSL-G-----G-QVEIVKDGGPYVMFGDGKLCACKPISE  253 (390)
T ss_pred             --chHHHHHHHHHHHHHHh-----c-cCCCCEEEEccHHHhccc-H-----H-HHHhhccCCceEEecCCcccccCceeH
Confidence              44688888888766543     2 457999999998875321 0     1 1111111101   0  1     14677


Q ss_pred             HHHHHHHHHhcCc
Q 024976          234 WDIAMAALYLASD  246 (259)
Q Consensus       234 ~dva~~~~~l~s~  246 (259)
                      +|+|..+..++.+
T Consensus       254 ~DlA~~i~~~~~~  266 (390)
T PLN02657        254 ADLASFIADCVLD  266 (390)
T ss_pred             HHHHHHHHHHHhC
Confidence            8999988887743

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.63  E-value=2.4e-14  Score=126.10  Aligned_cols=200  Identities=15%  Similarity=0.066  Sum_probs=133.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH-HHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++++++||||+|.||++++++|.++|++|+++++......+ ....+  ...++.++..|+.+..     +       ..
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l-------~~  183 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L-------LE  183 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h-------cC
Confidence            56899999999999999999999999999998875332211 11111  1245788889987652     1       25


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------  161 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  161 (259)
                      +|+|||+|+....... .   ++....+++|+.++.++++++...    +         .++|++||...+.        
T Consensus       184 ~D~ViHlAa~~~~~~~-~---~~p~~~~~~Nv~gt~nLleaa~~~----g---------~r~V~~SS~~VYg~~~~~p~~  246 (442)
T PLN02206        184 VDQIYHLACPASPVHY-K---FNPVKTIKTNVVGTLNMLGLAKRV----G---------ARFLLTSTSEVYGDPLQHPQV  246 (442)
T ss_pred             CCEEEEeeeecchhhh-h---cCHHHHHHHHHHHHHHHHHHHHHh----C---------CEEEEECChHHhCCCCCCCCC
Confidence            8999999986432211 1   124578899999999999988643    1         3599999976542        


Q ss_pred             --------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC--CChHHHHHHhhh--hcc---
Q 024976          162 --------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATD--YMA---  226 (259)
Q Consensus       162 --------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~~--~~~---  226 (259)
                              +......|+.+|.+.+.+++.+..++    |+++..+.|+.+..+.....  ..-.........  .+.   
T Consensus       247 E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~----g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g  322 (442)
T PLN02206        247 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA----NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYG  322 (442)
T ss_pred             ccccccCCCCCccchHHHHHHHHHHHHHHHHHHh----CCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeC
Confidence                    11124569999999999888776554    48899999988876542211  111112222211  111   


Q ss_pred             ----CCCCCCHHHHHHHHHHhcC
Q 024976          227 ----AYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       227 ----~~~~~~~~dva~~~~~l~s  245 (259)
                          ..-+...+|++++++.++.
T Consensus       323 ~G~~~rdfi~V~Dva~ai~~a~e  345 (442)
T PLN02206        323 DGKQTRSFQFVSDLVEGLMRLME  345 (442)
T ss_pred             CCCEEEeEEeHHHHHHHHHHHHh
Confidence                1125779999999988874

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.62  E-value=3.8e-14  Score=118.40  Aligned_cols=181  Identities=16%  Similarity=0.124  Sum_probs=127.1

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||+|.||++++++|.++|++|++++|+                     .+|+.+.++++++++..     .+|++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d~v   54 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI-----RPDAV   54 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCCEE
Confidence            47999999999999999999999999999874                     47999999998887653     58999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------  162 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  162 (259)
                      ||+++......    ........+++|+.++..+++++..    .+         .++|++||...+.+           
T Consensus        55 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~---------~~~v~~Ss~~vy~~~~~~~~~E~~~  117 (287)
T TIGR01214        55 VNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAAR----HG---------ARLVHISTDYVFDGEGKRPYREDDA  117 (287)
T ss_pred             EECCccccccc----cccCHHHHHHHHHHHHHHHHHHHHH----cC---------CeEEEEeeeeeecCCCCCCCCCCCC
Confidence            99999643211    1223456788999999999988753    21         46999998654322           


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc-------CCCCCCHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWD  235 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d  235 (259)
                      ..+...|+.+|.+.+.+++.+        +.++..++|+.+..+.....+ ............+       ..-+...+|
T Consensus       118 ~~~~~~Y~~~K~~~E~~~~~~--------~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  188 (287)
T TIGR01214       118 TNPLNVYGQSKLAGEQAIRAA--------GPNALIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKD  188 (287)
T ss_pred             CCCcchhhHHHHHHHHHHHHh--------CCCeEEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHH
Confidence            113457999999988887754        257889999999865421111 1112221111111       122456899


Q ss_pred             HHHHHHHhcCc
Q 024976          236 IAMAALYLASD  246 (259)
Q Consensus       236 va~~~~~l~s~  246 (259)
                      +++++..++..
T Consensus       189 va~a~~~~~~~  199 (287)
T TIGR01214       189 LARVIAALLQR  199 (287)
T ss_pred             HHHHHHHHHhh
Confidence            99999998854

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.62  E-value=3.6e-14  Score=119.97  Aligned_cols=201  Identities=16%  Similarity=0.118  Sum_probs=132.9

Q ss_pred             EEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      ++||||+|.||.++++.|.++|+ .|++++|..... .. ..+.     ...+..|+.+.+.++.+.+.   .+.++|+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~-----~~~~~~d~~~~~~~~~~~~~---~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA-----DLVIADYIDKEDFLDRLEKG---AFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh-----heeeeccCcchhHHHHHHhh---ccCCCCEE
Confidence            58999999999999999999998 688887654321 11 1111     13466788887777665542   34689999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------  162 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  162 (259)
                      ||+|+....      ..++.+..+++|+.++.++++++...    +         .++|++||...+..           
T Consensus        71 vh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~----~---------~~~v~~SS~~vy~~~~~~~~e~~~~  131 (314)
T TIGR02197        71 FHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAEK----G---------IPFIYASSAATYGDGEAGFREGREL  131 (314)
T ss_pred             EECccccCc------cccchHHHHHHHHHHHHHHHHHHHHh----C---------CcEEEEccHHhcCCCCCCcccccCc
Confidence            999996321      22345678899999999999887642    1         45999999654421           


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC--CC--hHHHHHHhhhh--cc----------
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LA--PEEIRSKATDY--MA----------  226 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~--~~--~~~~~~~~~~~--~~----------  226 (259)
                      ..+...|+.+|.+.+.+++....+.  ..++++..+.|+.+..+.....  +.  -..........  .+          
T Consensus       132 ~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (314)
T TIGR02197       132 ERPLNVYGYSKFLFDQYVRRRVLPE--ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKD  209 (314)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhHhh--ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCC
Confidence            1245679999999999998643322  2347888899988886643211  10  01111111111  10          


Q ss_pred             ---CCCCCCHHHHHHHHHHhcCc
Q 024976          227 ---AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 ---~~~~~~~~dva~~~~~l~s~  246 (259)
                         ..-+...+|+++++..++..
T Consensus       210 g~~~~~~i~v~D~a~~i~~~~~~  232 (314)
T TIGR02197       210 GEQLRDFVYVKDVVDVNLWLLEN  232 (314)
T ss_pred             CCceeeeEEHHHHHHHHHHHHhc
Confidence               12367799999999998864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.61  E-value=1.9e-14  Score=121.20  Aligned_cols=187  Identities=16%  Similarity=0.088  Sum_probs=128.2

Q ss_pred             EEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 024976           16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN   95 (259)
Q Consensus        16 lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~   95 (259)
                      +||||+|.||+++++.|.+.|++|+++.++                    ..+|+++.+++.++++..     ++|+|||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih   55 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYVIL   55 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence            699999999999999999999987766432                    147999999998887753     5899999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-------------
Q 024976           96 AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------------  162 (259)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  162 (259)
                      +|+.......   ..++....++.|+.++..+++++...    +.        .++|++||...+.+             
T Consensus        56 ~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~----~~--------~~~i~~SS~~vyg~~~~~~~~E~~~~~  120 (306)
T PLN02725         56 AAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAAYRH----GV--------KKLLFLGSSCIYPKFAPQPIPETALLT  120 (306)
T ss_pred             eeeeecccch---hhhCcHHHHHHHhHHHHHHHHHHHHc----CC--------CeEEEeCceeecCCCCCCCCCHHHhcc
Confidence            9996321110   11123456788999999998888642    22        56999999654321             


Q ss_pred             --C-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC-----CCChHHHHH---Hhh---------
Q 024976          163 --T-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS-----KLAPEEIRS---KAT---------  222 (259)
Q Consensus       163 --~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~-----~~~~~~~~~---~~~---------  222 (259)
                        . +....|+.+|.+.+.+.+.+..++    ++++..+.|+.+..+....     ...+.....   ...         
T Consensus       121 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (306)
T PLN02725        121 GPPEPTNEWYAIAKIAGIKMCQAYRIQY----GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVW  196 (306)
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHh----CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEc
Confidence              1 112349999999999888876654    5899999999998764211     111111111   000         


Q ss_pred             -hhccCCCCCCHHHHHHHHHHhcCc
Q 024976          223 -DYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       223 -~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                       +..+...+...+|++++++.++..
T Consensus       197 ~~g~~~~~~i~v~Dv~~~~~~~~~~  221 (306)
T PLN02725        197 GSGSPLREFLHVDDLADAVVFLMRR  221 (306)
T ss_pred             CCCCeeeccccHHHHHHHHHHHHhc
Confidence             111123578899999999998864

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.60  E-value=8.3e-15  Score=128.82  Aligned_cols=201  Identities=13%  Similarity=0.042  Sum_probs=133.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +.++++||||+|.||++++++|.++|++|++++|...........+. ...++.++..|+.+..     +       .++
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~-------~~~  185 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI-----L-------LEV  185 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc-----c-------cCC
Confidence            34689999999999999999999999999999876432221111111 1235778889987542     1       258


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---------  161 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------  161 (259)
                      |+|||+|+........    .+....+++|+.++.++++++...    +         .++|++||...+.         
T Consensus       186 D~ViHlAa~~~~~~~~----~~p~~~~~~Nv~gT~nLleaa~~~----g---------~r~V~~SS~~VYg~~~~~p~~E  248 (436)
T PLN02166        186 DQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV----G---------ARFLLTSTSEVYGDPLEHPQKE  248 (436)
T ss_pred             CEEEECceeccchhhc----cCHHHHHHHHHHHHHHHHHHHHHh----C---------CEEEEECcHHHhCCCCCCCCCc
Confidence            9999999864332211    123577889999999999888643    1         3599998876432         


Q ss_pred             -------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC---CCChHHHHHHhhhhc------
Q 024976          162 -------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---KLAPEEIRSKATDYM------  225 (259)
Q Consensus       162 -------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~---~~~~~~~~~~~~~~~------  225 (259)
                             +..+...|+.+|.+.+.+++.....+    |+++..+.|+.+..+....   ...+........+..      
T Consensus       249 ~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~----~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~  324 (436)
T PLN02166        249 TYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA----GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGD  324 (436)
T ss_pred             cccccCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCC
Confidence                   11123469999999999998776543    5889999998888764321   111111111111111      


Q ss_pred             --cCCCCCCHHHHHHHHHHhcC
Q 024976          226 --AAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       226 --~~~~~~~~~dva~~~~~l~s  245 (259)
                        ...-+...+|+++++..++.
T Consensus       325 g~~~rdfi~V~Dva~ai~~~~~  346 (436)
T PLN02166        325 GKQTRSFQYVSDLVDGLVALME  346 (436)
T ss_pred             CCeEEeeEEHHHHHHHHHHHHh
Confidence              11226779999999988874

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.59  E-value=1.2e-13  Score=107.65  Aligned_cols=173  Identities=16%  Similarity=0.128  Sum_probs=122.6

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV   94 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li   94 (259)
                      |+|+||+|.+|+.++++|.++|++|+++.|+.++.+.        ..+++++.+|+.|++++.+.++       +.|.+|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence            6899999999999999999999999999999887655        4579999999999988887765       799999


Q ss_pred             ECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc--------
Q 024976           95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--------  166 (259)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  166 (259)
                      ++.|....         +            ...++.++..+++.+.        .++|++|+...+...+..        
T Consensus        66 ~~~~~~~~---------~------------~~~~~~~~~a~~~~~~--------~~~v~~s~~~~~~~~~~~~~~~~~~~  116 (183)
T PF13460_consen   66 HAAGPPPK---------D------------VDAAKNIIEAAKKAGV--------KRVVYLSSAGVYRDPPGLFSDEDKPI  116 (183)
T ss_dssp             ECCHSTTT---------H------------HHHHHHHHHHHHHTTS--------SEEEEEEETTGTTTCTSEEEGGTCGG
T ss_pred             hhhhhhcc---------c------------cccccccccccccccc--------ccceeeeccccCCCCCcccccccccc
Confidence            99984222         1            4455666666666553        689999998766543331        


Q ss_pred             -hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          167 -IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       167 -~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                       ..|...|...+.+.+        ..+++...++|+.+..+.......-..      .........+.+|+|++++.++.
T Consensus       117 ~~~~~~~~~~~e~~~~--------~~~~~~~ivrp~~~~~~~~~~~~~~~~------~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  117 FPEYARDKREAEEALR--------ESGLNWTIVRPGWIYGNPSRSYRLIKE------GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             GHHHHHHHHHHHHHHH--------HSTSEEEEEEESEEEBTTSSSEEEESS------TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHH--------hcCCCEEEEECcEeEeCCCcceeEEec------cCCCCcCcCCHHHHHHHHHHHhC
Confidence             245666654443332        347999999999997554221000000      11111245679999999998763

...

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.58  E-value=4.4e-14  Score=115.30  Aligned_cols=154  Identities=21%  Similarity=0.208  Sum_probs=118.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh----hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~----~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++||||||+|-||.+++.+|.++|++|+++|.-..    .++... .+...+..+.++..|+.|.+.++++|++.    
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~-~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVR-QLLGEGKSVFFVEGDLNDAEALEKLFSEV----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHH-HhcCCCCceEEEEeccCCHHHHHHHHhhc----
Confidence            689999999999999999999999999999975322    222222 22233567999999999999999999876    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------  161 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  161 (259)
                       .+|.|+|-|+.-..+.    +.+.....+..|+.|+++++..+..+-    .        ..+|+.||...+-      
T Consensus        77 -~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~~~~~----~--------~~~V~sssatvYG~p~~ip  139 (343)
T KOG1371|consen   77 -KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVMKAHN----V--------KALVFSSSATVYGLPTKVP  139 (343)
T ss_pred             -CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHHHHcC----C--------ceEEEecceeeecCcceee
Confidence             5999999999643332    334457889999999999988776543    2        4488888876541      


Q ss_pred             -----cC-ccchhhHHHHHHHHHHHHHHHHHh
Q 024976          162 -----AT-WYQIHVSAAKAAVDSITRSLALEW  187 (259)
Q Consensus       162 -----~~-~~~~~Y~~sK~a~~~l~~~la~e~  187 (259)
                           +. .+...|+.+|.+++...+....-+
T Consensus       140 ~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~  171 (343)
T KOG1371|consen  140 ITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAY  171 (343)
T ss_pred             ccCcCCCCCCCCcchhhhHHHHHHHHhhhccc
Confidence                 12 256779999999999999887754

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.57  E-value=7.3e-14  Score=118.44  Aligned_cols=188  Identities=15%  Similarity=0.056  Sum_probs=122.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||+|.||++++++|.++|++|.++.|+.+....    +..  ..+.++.+|++|++++.++++       ++|+|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~--~~v~~v~~Dl~d~~~l~~al~-------g~d~V   68 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE--WGAELVYGDLSLPETLPPSFK-------GVTAI   68 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh--cCCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence            69999999999999999999999999999998654322    111  248899999999998877664       68999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK  173 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  173 (259)
                      ||+++....         +.....++|+.++.++++++...    +.        .++|++||..+.. . +...|..+|
T Consensus        69 i~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa~~~----gv--------kr~I~~Ss~~~~~-~-~~~~~~~~K  125 (317)
T CHL00194         69 IDASTSRPS---------DLYNAKQIDWDGKLALIEAAKAA----KI--------KRFIFFSILNAEQ-Y-PYIPLMKLK  125 (317)
T ss_pred             EECCCCCCC---------CccchhhhhHHHHHHHHHHHHHc----CC--------CEEEEeccccccc-c-CCChHHHHH
Confidence            998763211         12345667888888888777542    22        4699999864321 1 234577888


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHH---hhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK---ATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       174 ~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ...+.+.+        ..|++...++|+.+... +......+.....   .........+.+.+|+|+++..++..
T Consensus       126 ~~~e~~l~--------~~~l~~tilRp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  192 (317)
T CHL00194        126 SDIEQKLK--------KSGIPYTIFRLAGFFQG-LISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSL  192 (317)
T ss_pred             HHHHHHHH--------HcCCCeEEEeecHHhhh-hhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcC
Confidence            77766543        34688899999866421 1110000000000   00000011245679999999888754

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.52  E-value=4.3e-12  Score=93.52  Aligned_cols=215  Identities=17%  Similarity=0.077  Sum_probs=152.6

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC--C
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--K   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g--~   89 (259)
                      -++++|-||-+.+|.+|+.+|.+.++-|.-+|..+.+  +        ...-..+..|-+=-|+-+.+++++.+.++  .
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe--~--------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gek   72 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE--Q--------ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEK   72 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc--c--------ccceEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence            4688999999999999999999999999888765432  0        01122344444445677777887777663  7


Q ss_pred             ccEEEECCCCCCCCCCCCCC-HHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           90 LDILVNAAAGNFLVPAEDLS-PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      +|.+++.||.+..+.-..-+ .....-++...+...-...+.+..+++.          +|.+-......+..+.|+...
T Consensus        73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~----------GGLL~LtGAkaAl~gTPgMIG  142 (236)
T KOG4022|consen   73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP----------GGLLQLTGAKAALGGTPGMIG  142 (236)
T ss_pred             cceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC----------CceeeecccccccCCCCcccc
Confidence            99999999976554322111 1223344555556555566666666654          366777788888899999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          169 VSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      |+.+|+|+++|+++|+.+-. -+.|--+..|-|-..+||+..+++++.++          ..|...+.+++..+....+.
T Consensus       143 YGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf----------ssWTPL~fi~e~flkWtt~~  212 (236)
T KOG4022|consen  143 YGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF----------SSWTPLSFISEHFLKWTTET  212 (236)
T ss_pred             hhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcc----------cCcccHHHHHHHHHHHhccC
Confidence            99999999999999998743 34567788999999999999888876543          33556778888877776665


Q ss_pred             CCccccccc
Q 024976          248 AVHRDLIHL  256 (259)
Q Consensus       248 ~~~~tG~~i  256 (259)
                      ++--+|.-|
T Consensus       213 ~RPssGsLl  221 (236)
T KOG4022|consen  213 SRPSSGSLL  221 (236)
T ss_pred             CCCCCCceE
Confidence            555555443

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.51  E-value=3.5e-13  Score=113.37  Aligned_cols=146  Identities=17%  Similarity=0.158  Sum_probs=106.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      ++|||||+|.||+++++.|.++| +|+.++|...                 .+..|++|.+.+.++++..     ++|+|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V   58 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPDVI   58 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999999 8888887531                 2457999999998888753     58999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------c
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------A  162 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~  162 (259)
                      ||+|+......    ..++.+..+.+|+.++.++++++...    +         .++|++||...+.           +
T Consensus        59 ih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~~----g---------~~~v~~Ss~~Vy~~~~~~p~~E~~~  121 (299)
T PRK09987         59 VNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAANEV----G---------AWVVHYSTDYVFPGTGDIPWQETDA  121 (299)
T ss_pred             EECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHHc----C---------CeEEEEccceEECCCCCCCcCCCCC
Confidence            99999643221    12223566789999999999888642    1         4589998864331           1


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~  207 (259)
                      ..+...|+.+|.+.+.+++....        +...++|+++..+.
T Consensus       122 ~~P~~~Yg~sK~~~E~~~~~~~~--------~~~ilR~~~vyGp~  158 (299)
T PRK09987        122 TAPLNVYGETKLAGEKALQEHCA--------KHLIFRTSWVYAGK  158 (299)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhCC--------CEEEEecceecCCC
Confidence            12345799999999988865421        23667777776543

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.50  E-value=3.3e-12  Score=105.08  Aligned_cols=185  Identities=14%  Similarity=0.091  Sum_probs=149.8

Q ss_pred             CcEEEEeCC-ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC--
Q 024976           12 GKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--   88 (259)
Q Consensus        12 ~k~~lItGa-~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g--   88 (259)
                      ..+|+|.|. +..|++.++..|-++|+-|+++..+.+..+....+-   ..++..+..|..+..++...+.++.+.+.  
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p   79 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRP   79 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence            458888885 799999999999999999999988876544444332   34588888899888888888877776554  


Q ss_pred             ------------CccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEE-e
Q 024976           89 ------------KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN-I  154 (259)
Q Consensus        89 ------------~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~-i  154 (259)
                                  .+..||..+... ..+++..++.++|.+.++.|+..++.++|.++|.++.+...      ..+||. .
T Consensus        80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~------~~~iil~~  153 (299)
T PF08643_consen   80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQ------KSKIILFN  153 (299)
T ss_pred             CCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC------CceEEEEe
Confidence                        356777777644 46889999999999999999999999999999999883310      145555 4


Q ss_pred             ccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCC
Q 024976          155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  206 (259)
Q Consensus       155 sS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~  206 (259)
                      -|+......+..+.-+...+++.+|++.|++|+. .+||.|..+..|.++-.
T Consensus       154 Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~-~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  154 PSISSSLNPPFHSPESIVSSALSSFFTSLRRELR-PHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             CchhhccCCCccCHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEeeeeccc
Confidence            5676777778888889999999999999999998 89999999999988743

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.47  E-value=6.6e-12  Score=116.62  Aligned_cols=162  Identities=17%  Similarity=0.123  Sum_probs=112.3

Q ss_pred             EEEEeCCccchHHHHHHHHH--HcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCHHH--HHHHHHHHHHHcC
Q 024976           14 VALLTGGGSGIGFEISLQLG--KHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKRED--AVRVVESTINHFG   88 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~--~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~--~~~~~~~~~~~~g   88 (259)
                      +++||||+|.||++++++|+  +.|++|++++|+... ....+.....+ .++.++.+|++|++.  ....++++    .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            79999999999999999999  589999999996432 22222222222 468999999998531  01112222    4


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----  163 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  163 (259)
                      ++|+|||+|+.....    .+   .....++|+.++.++++++..    .+.        .++|++||...+...     
T Consensus        77 ~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~----~~~--------~~~v~~SS~~v~g~~~~~~~  137 (657)
T PRK07201         77 DIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELAER----LQA--------ATFHHVSSIAVAGDYEGVFR  137 (657)
T ss_pred             CCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHHHh----cCC--------CeEEEEeccccccCccCccc
Confidence            799999999964321    12   345668899999888887653    222        569999987654211     


Q ss_pred             --------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCC
Q 024976          164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  206 (259)
Q Consensus       164 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~  206 (259)
                              .....|+.+|...+.+.+.       ..|+++..+.|+.+..+
T Consensus       138 e~~~~~~~~~~~~Y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        138 EDDFDEGQGLPTPYHRTKFEAEKLVRE-------ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             cccchhhcCCCCchHHHHHHHHHHHHH-------cCCCcEEEEcCCeeeec
Confidence                    1224699999999988752       23689999999999764

>PRK05865 hypothetical protein; Provisional

Probab=99.46  E-value=1.1e-12  Score=122.38  Aligned_cols=164  Identities=14%  Similarity=0.069  Sum_probs=117.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||+|+||++++++|+++|++|++++|+....      .   ..++.++.+|++|.+++.++++       .+|+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~-------~vD~V   65 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT-------GADVV   65 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            699999999999999999999999999999874321      1   1247889999999999888775       58999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK  173 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  173 (259)
                      ||+|+....             .+++|+.++.++++++.    +.+.        ++||++||..              |
T Consensus        66 VHlAa~~~~-------------~~~vNv~GT~nLLeAa~----~~gv--------kr~V~iSS~~--------------K  106 (854)
T PRK05865         66 AHCAWVRGR-------------NDHINIDGTANVLKAMA----ETGT--------GRIVFTSSGH--------------Q  106 (854)
T ss_pred             EECCCcccc-------------hHHHHHHHHHHHHHHHH----HcCC--------CeEEEECCcH--------------H
Confidence            999985321             35789999888776654    3332        6799999863              7


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhh-hhccCC------CCCCHHHHHHHHHHhcC
Q 024976          174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAY------KFGEKWDIAMAALYLAS  245 (259)
Q Consensus       174 ~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~dva~~~~~l~s  245 (259)
                      .+.+.+.+        ..|+++..+.|+.+..+..     +........ ...+.+      .+...+|+++++..++.
T Consensus       107 ~aaE~ll~--------~~gl~~vILRp~~VYGP~~-----~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~  172 (854)
T PRK05865        107 PRVEQMLA--------DCGLEWVAVRCALIFGRNV-----DNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALL  172 (854)
T ss_pred             HHHHHHHH--------HcCCCEEEEEeceEeCCCh-----HHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHh
Confidence            66665553        2468999999999986531     111111110 111111      25778999999988874

>PLN02996 fatty acyl-CoA reductase

Probab=99.45  E-value=4.4e-12  Score=113.29  Aligned_cols=206  Identities=13%  Similarity=0.099  Sum_probs=132.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC---eEEEEeCChh---hHHHHHHHH---------Hh-c--------CCCeE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKT---VLRSAVAAL---------HS-L--------GIPAI   64 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~---~vv~~~r~~~---~~~~~~~~~---------~~-~--------~~~v~   64 (259)
                      -++||+++||||||.||..+++.|++.+.   +|+++.|...   ..+.+..++         .+ .        ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            47899999999999999999999998653   4777777542   111211111         00 0        15789


Q ss_pred             EEEcCCCC-------HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHh
Q 024976           65 GLEGDVRK-------REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK  137 (259)
Q Consensus        65 ~~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  137 (259)
                      ++.+|+++       .+.++++++       .+|+|||+|+....   .    ++.+..+++|+.++.++++++...   
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~~---  150 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF---D----ERYDVALGINTLGALNVLNFAKKC---  150 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC---c----CCHHHHHHHHHHHHHHHHHHHHhc---
Confidence            99999984       333444443       59999999996432   1    245678899999999999887642   


Q ss_pred             cCCCCCCCCCCceEEEeccccccccC---------c--------------------------------------------
Q 024976          138 GGRGQASSSSGGIIINISATLHYTAT---------W--------------------------------------------  164 (259)
Q Consensus       138 ~~~~~~~~~~~g~iv~isS~~~~~~~---------~--------------------------------------------  164 (259)
                      ...        .++|++||...+...         +                                            
T Consensus       151 ~~~--------k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (491)
T PLN02996        151 VKV--------KMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDL  222 (491)
T ss_pred             CCC--------CeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhh
Confidence            111        468888886643210         0                                            


Q ss_pred             ---------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC--CC-----hHHHHHHhhhhcc--
Q 024976          165 ---------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LA-----PEEIRSKATDYMA--  226 (259)
Q Consensus       165 ---------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~--~~-----~~~~~~~~~~~~~--  226 (259)
                               ....|+.||+..+.+++..    .  .|+.+..++|+.|..+.....  +.     +...........+  
T Consensus       223 ~~~~~~~~~~pn~Y~~TK~~aE~lv~~~----~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~  296 (491)
T PLN02996        223 GMERAKLHGWPNTYVFTKAMGEMLLGNF----K--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTC  296 (491)
T ss_pred             chhHHHhCCCCCchHhhHHHHHHHHHHh----c--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeE
Confidence                     0124999999999888643    2  269999999999976542211  00     1111111111111  


Q ss_pred             -------CCCCCCHHHHHHHHHHhcC
Q 024976          227 -------AYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       227 -------~~~~~~~~dva~~~~~l~s  245 (259)
                             ..-+...+|++++++.++.
T Consensus       297 ~~gdg~~~~D~v~Vddvv~a~l~a~~  322 (491)
T PLN02996        297 FLADPNSVLDVIPADMVVNAMIVAMA  322 (491)
T ss_pred             EecCCCeecceecccHHHHHHHHHHH
Confidence                   1235668899999887764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.42  E-value=2.7e-12  Score=107.20  Aligned_cols=181  Identities=15%  Similarity=0.093  Sum_probs=119.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      .++||||++|-||.++.+.|.++|++|+.++|.                     .+|++|.+.+.+++++.     ++|+
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~pd~   54 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF-----KPDV   54 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH-------SE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh-----CCCe
Confidence            379999999999999999999999999998776                     67999999999999876     6999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------  163 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  163 (259)
                      |||+|+.....    .-.++.+..+.+|+.++..+.+++..    .         +.++|++||..-+.+.         
T Consensus        55 Vin~aa~~~~~----~ce~~p~~a~~iN~~~~~~la~~~~~----~---------~~~li~~STd~VFdG~~~~~y~E~d  117 (286)
T PF04321_consen   55 VINCAAYTNVD----ACEKNPEEAYAINVDATKNLAEACKE----R---------GARLIHISTDYVFDGDKGGPYTEDD  117 (286)
T ss_dssp             EEE------HH----HHHHSHHHHHHHHTHHHHHHHHHHHH----C---------T-EEEEEEEGGGS-SSTSSSB-TTS
T ss_pred             EeccceeecHH----hhhhChhhhHHHhhHHHHHHHHHHHH----c---------CCcEEEeeccEEEcCCcccccccCC
Confidence            99999963211    11233567889999999999988864    2         2679999997644222         


Q ss_pred             --ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc-------CCCCCCHH
Q 024976          164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKW  234 (259)
Q Consensus       164 --~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  234 (259)
                        .+...|+.+|...+..++..   .  +   +...++++++..+ ....+ -....+.+....+       .......+
T Consensus       118 ~~~P~~~YG~~K~~~E~~v~~~---~--~---~~~IlR~~~~~g~-~~~~~-~~~~~~~~~~~~~i~~~~d~~~~p~~~~  187 (286)
T PF04321_consen  118 PPNPLNVYGRSKLEGEQAVRAA---C--P---NALILRTSWVYGP-SGRNF-LRWLLRRLRQGEPIKLFDDQYRSPTYVD  187 (286)
T ss_dssp             ----SSHHHHHHHHHHHHHHHH------S---SEEEEEE-SEESS-SSSSH-HHHHHHHHHCTSEEEEESSCEE--EEHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHh---c--C---CEEEEecceeccc-CCCch-hhhHHHHHhcCCeeEeeCCceeCCEEHH
Confidence              23457999999988887752   1  1   5577788887754 11111 2223232222111       12346688


Q ss_pred             HHHHHHHHhcCc
Q 024976          235 DIAMAALYLASD  246 (259)
Q Consensus       235 dva~~~~~l~s~  246 (259)
                      |+|+.+..|+..
T Consensus       188 dlA~~i~~l~~~  199 (286)
T PF04321_consen  188 DLARVILELIEK  199 (286)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999998754

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.41  E-value=4.7e-12  Score=103.73  Aligned_cols=159  Identities=20%  Similarity=0.199  Sum_probs=98.8

Q ss_pred             EeCCccchHHHHHHHHHHcCC--eEEEEeCChhh---HHHHHHHHH----------hcCCCeEEEEcCCCCHH------H
Q 024976           17 LTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTV---LRSAVAALH----------SLGIPAIGLEGDVRKRE------D   75 (259)
Q Consensus        17 ItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~---~~~~~~~~~----------~~~~~v~~~~~Dl~~~~------~   75 (259)
                      ||||||.+|..+.++|++++.  +|+++.|..+.   .+.+.+.+.          ....+++++.+|++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999887532   233322221          12568999999999853      3


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 024976           76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS  155 (259)
Q Consensus        76 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is  155 (259)
                      .+++.+       .+|+|||||+.....       ..+....++|+.|+.++++.+..    .+.        .+++++|
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~-------~~~~~~~~~NV~gt~~ll~la~~----~~~--------~~~~~iS  134 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN-------APYSELRAVNVDGTRNLLRLAAQ----GKR--------KRFHYIS  134 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS----SS-----------EEEEE
T ss_pred             hhcccc-------ccceeeecchhhhhc-------ccchhhhhhHHHHHHHHHHHHHh----ccC--------cceEEec
Confidence            334333       589999999964322       13456788999999999988862    111        3599999


Q ss_pred             ccccc--cc------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccC
Q 024976          156 ATLHY--TA------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  205 (259)
Q Consensus       156 S~~~~--~~------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t  205 (259)
                      |....  ..                  ......|..||...|.+.+..+.+.    |+.+..++||.+..
T Consensus       135 Ta~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~----g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  135 TAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH----GLPVTIYRPGIIVG  200 (249)
T ss_dssp             EGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-------EEEEEE-EEE-
T ss_pred             cccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC----CceEEEEecCcccc
Confidence            93211  11                  0122469999999999999887764    48999999999975

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.39  E-value=3.4e-11  Score=98.28  Aligned_cols=180  Identities=17%  Similarity=0.151  Sum_probs=127.1

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV   94 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li   94 (259)
                      +||||++|-+|.++++.|. .+.+|+.++|..                     +|++|.+.+.+++.+.     ++|+||
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDvVI   55 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET-----RPDVVI   55 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence            8999999999999999999 668899888754                     7999999999999987     799999


Q ss_pred             ECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----------
Q 024976           95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------  163 (259)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  163 (259)
                      |+|++.....    -+.+-+..+.+|..++.++.+++...             +..+|++|+-.-+-+.           
T Consensus        56 n~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa~~~-------------ga~lVhiSTDyVFDG~~~~~Y~E~D~~  118 (281)
T COG1091          56 NAAAYTAVDK----AESEPELAFAVNATGAENLARAAAEV-------------GARLVHISTDYVFDGEKGGPYKETDTP  118 (281)
T ss_pred             ECcccccccc----ccCCHHHHHHhHHHHHHHHHHHHHHh-------------CCeEEEeecceEecCCCCCCCCCCCCC
Confidence            9999753322    22335788999999999999999753             3669999986643222           


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhh-------ccCCCCCCHHHH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-------MAAYKFGEKWDI  236 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dv  236 (259)
                      .+...|+.||.+-+..++....        +...+...++..... ..+ ...+.+...+.       -+.+.....+|+
T Consensus       119 ~P~nvYG~sKl~GE~~v~~~~~--------~~~I~Rtswv~g~~g-~nF-v~tml~la~~~~~l~vv~Dq~gsPt~~~dl  188 (281)
T COG1091         119 NPLNVYGRSKLAGEEAVRAAGP--------RHLILRTSWVYGEYG-NNF-VKTMLRLAKEGKELKVVDDQYGSPTYTEDL  188 (281)
T ss_pred             CChhhhhHHHHHHHHHHHHhCC--------CEEEEEeeeeecCCC-CCH-HHHHHHHhhcCCceEEECCeeeCCccHHHH
Confidence            3456899999999988885532        334444445543221 111 11112211111       123456788999


Q ss_pred             HHHHHHhcCccC
Q 024976          237 AMAALYLASDAA  248 (259)
Q Consensus       237 a~~~~~l~s~~~  248 (259)
                      |+++..|+....
T Consensus       189 A~~i~~ll~~~~  200 (281)
T COG1091         189 ADAILELLEKEK  200 (281)
T ss_pred             HHHHHHHHhccc
Confidence            999999876543

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.38  E-value=4.4e-12  Score=101.72  Aligned_cols=215  Identities=19%  Similarity=0.132  Sum_probs=148.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH----HHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS----AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~----~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+|++||||-+|--|.-+++.|+++|+.|..+.|+.+....    +.+.-...+.+++++.+|++|..++.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            36899999999999999999999999999998876332111    11111122456889999999999999999987   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc--c-----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL--H-----  159 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~--~-----  159 (259)
                        .+|-+.|-++.    ++...+.++.+.+.+++..|++.++.++.-.-.+.          .++...||.-  |     
T Consensus        78 --~PdEIYNLaAQ----S~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~----------~rfYQAStSE~fG~v~~~  141 (345)
T COG1089          78 --QPDEIYNLAAQ----SHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKK----------TRFYQASTSELYGLVQEI  141 (345)
T ss_pred             --Cchhheecccc----ccccccccCcceeeeechhHHHHHHHHHHHhCCcc----------cEEEecccHHhhcCcccC
Confidence              69999999984    34445666778889999999999998886543211          4566665532  1     


Q ss_pred             ----cccCccchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEecccccCCcccCCCChHHHHH---H------hhhh
Q 024976          160 ----YTATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS---K------ATDY  224 (259)
Q Consensus       160 ----~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~---~------~~~~  224 (259)
                          ..|+.+.+.|+++|.+..+++...+..|+  .-.||-+|.=+|.-=+  .|...-......+   .      +.+.
T Consensus       142 pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge--~FVTRKIt~ava~Ik~G~q~~l~lGNl  219 (345)
T COG1089         142 PQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGE--TFVTRKITRAVARIKLGLQDKLYLGNL  219 (345)
T ss_pred             ccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCcc--ceehHHHHHHHHHHHccccceEEeccc
Confidence                24667788999999999999998887764  2345666665554332  2222211111111   1      1222


Q ss_pred             ccCCCCCCHHHHHHHHHHhcCc
Q 024976          225 MAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       225 ~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      -...-|+.+.|..++++.++..
T Consensus       220 dAkRDWG~A~DYVe~mwlmLQq  241 (345)
T COG1089         220 DAKRDWGHAKDYVEAMWLMLQQ  241 (345)
T ss_pred             cccccccchHHHHHHHHHHHcc
Confidence            2234588899999998888764

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.37  E-value=1e-11  Score=104.86  Aligned_cols=169  Identities=15%  Similarity=0.101  Sum_probs=123.0

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++++||||+|.+|++++.+|.+.+  .++.++|..... ....++.. ....++..+.+|+.+..++.+.+.      
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~-~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQ-SNLPAELTGFRSGRVTVILGDLLDANSISNAFQ------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccc-cccchhhhcccCCceeEEecchhhhhhhhhhcc------
Confidence            57899999999999999999999998  678899877542 11122211 134578999999999999888775      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------  161 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  161 (259)
                       .+ .++|+|....+.    .-..+.+..+++|+.|+.++++++...-.            .++|++||.....      
T Consensus        76 -~~-~Vvh~aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c~~~~v------------~~lIYtSs~~Vvf~g~~~~  137 (361)
T KOG1430|consen   76 -GA-VVVHCAASPVPD----FVENDRDLAMRVNVNGTLNVIEACKELGV------------KRLIYTSSAYVVFGGEPII  137 (361)
T ss_pred             -Cc-eEEEeccccCcc----ccccchhhheeecchhHHHHHHHHHHhCC------------CEEEEecCceEEeCCeecc
Confidence             45 777777643322    22224678899999999999888875432            4599999976432      


Q ss_pred             ------cCccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc
Q 024976          162 ------ATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  208 (259)
Q Consensus       162 ------~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~  208 (259)
                            |.+..  ..|+.||+-.+.+++..+.    ..+....+++|-.+..|..
T Consensus       138 n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~----~~~l~T~aLR~~~IYGpgd  188 (361)
T KOG1430|consen  138 NGDESLPYPLKHIDPYGESKALAEKLVLEANG----SDDLYTCALRPPGIYGPGD  188 (361)
T ss_pred             cCCCCCCCccccccccchHHHHHHHHHHHhcC----CCCeeEEEEccccccCCCC
Confidence                  22322  4799999999988886654    3458999999999986543

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.36  E-value=1.4e-10  Score=89.57  Aligned_cols=84  Identities=24%  Similarity=0.283  Sum_probs=72.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++||||+ |+|.++++.|+++|++|++++|+.+..+.+...+.. ..++.++.+|++|+++++++++.+.+.+|++|+
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            368999998 777889999999999999999998776666655543 446888999999999999999999999999999


Q ss_pred             EEECCC
Q 024976           93 LVNAAA   98 (259)
Q Consensus        93 li~~ag   98 (259)
                      +|+..-
T Consensus        79 lv~~vh   84 (177)
T PRK08309         79 AVAWIH   84 (177)
T ss_pred             EEEecc
Confidence            997766

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.34  E-value=1.4e-11  Score=98.81  Aligned_cols=210  Identities=15%  Similarity=0.100  Sum_probs=144.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHc--CCeEEEEeC---ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGR---RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~--G~~vv~~~r---~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .+.+.++||||.+.||...+..++..  .++.+.++-   ... + ...++.. ..++.++++.|+.+...+..++..  
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~-~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~--   78 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-L-KNLEPVR-NSPNYKFVEGDIADADLVLYLFET--   78 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-c-chhhhhc-cCCCceEeeccccchHHHHhhhcc--
Confidence            34589999999999999999999986  445555432   111 1 2222222 245789999999999998887753  


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---  161 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  161 (259)
                         ..+|.|+|-|+..+...    +--+-......|++++..|+++.......           .++|.+|+...+-   
T Consensus        79 ---~~id~vihfaa~t~vd~----s~~~~~~~~~nnil~t~~Lle~~~~sg~i-----------~~fvhvSTdeVYGds~  140 (331)
T KOG0747|consen   79 ---EEIDTVIHFAAQTHVDR----SFGDSFEFTKNNILSTHVLLEAVRVSGNI-----------RRFVHVSTDEVYGDSD  140 (331)
T ss_pred             ---CchhhhhhhHhhhhhhh----hcCchHHHhcCCchhhhhHHHHHHhccCe-----------eEEEEecccceecCcc
Confidence               48999999999543221    11223467789999999999999876532           4599999865431   


Q ss_pred             ---------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHH--Hhh-------h
Q 024976          162 ---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS--KAT-------D  223 (259)
Q Consensus       162 ---------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~--~~~-------~  223 (259)
                               ...+...|+++|+|.+++.+++...|+    +.+..++-+.|..|.....-.-+.+.+  ...       +
T Consensus       141 ~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~----lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~  216 (331)
T KOG0747|consen  141 EDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSYG----LPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGD  216 (331)
T ss_pred             ccccccccccCCCCCchHHHHHHHHHHHHHHhhccC----CcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecC
Confidence                     122345699999999999999988775    999999999998776543322121111  111       1


Q ss_pred             hccCCCCCCHHHHHHHHHHhcCc
Q 024976          224 YMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       224 ~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ......+...+|+++++...+..
T Consensus       217 g~~~rs~l~veD~~ea~~~v~~K  239 (331)
T KOG0747|consen  217 GLQTRSYLYVEDVSEAFKAVLEK  239 (331)
T ss_pred             cccceeeEeHHHHHHHHHHHHhc
Confidence            22233467789999998777644

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.34  E-value=2e-11  Score=108.52  Aligned_cols=157  Identities=17%  Similarity=0.179  Sum_probs=113.4

Q ss_pred             CcEEE----EeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           12 GKVAL----LTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        12 ~k~~l----ItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      |..++    |+||++|+|.++++.|...|++|+...+.....                   +.              ...
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-------------------~~--------------~~~   80 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-------------------AA--------------GWG   80 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc-------------------cc--------------CcC
Confidence            44556    888899999999999999999999876543310                   00              001


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      .+++.+++-+-..       .+.++        +.+.+.+++..++.|.+          +|+||+++|..+..   ...
T Consensus        81 ~~~~~~~~d~~~~-------~~~~~--------l~~~~~~~~~~l~~l~~----------~griv~i~s~~~~~---~~~  132 (450)
T PRK08261         81 DRFGALVFDATGI-------TDPAD--------LKALYEFFHPVLRSLAP----------CGRVVVLGRPPEAA---ADP  132 (450)
T ss_pred             CcccEEEEECCCC-------CCHHH--------HHHHHHHHHHHHHhccC----------CCEEEEEccccccC---Cch
Confidence            2455444322210       11222        22444667777777754          38899999987653   344


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+++.+|+|+++.|+  ..||+++.|.|++                            ..++++++++.|++++.
T Consensus       133 ~~~~akaal~gl~rsla~E~--~~gi~v~~i~~~~----------------------------~~~~~~~~~~~~l~s~~  182 (450)
T PRK08261        133 AAAAAQRALEGFTRSLGKEL--RRGATAQLVYVAP----------------------------GAEAGLESTLRFFLSPR  182 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHh--hcCCEEEEEecCC----------------------------CCHHHHHHHHHHhcCCc
Confidence            69999999999999999999  4689999998874                            25789999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.|++|+.+.+|
T Consensus       183 ~a~~~g~~i~~~  194 (450)
T PRK08261        183 SAYVSGQVVRVG  194 (450)
T ss_pred             cCCccCcEEEec
Confidence            999999998765

>PLN02778 3,5-epimerase/4-reductase

Probab=99.34  E-value=3.7e-11  Score=100.96  Aligned_cols=177  Identities=18%  Similarity=0.161  Sum_probs=109.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +++|||||+|.||+++++.|.++|++|+...                        .|+.+.+.+...++..     ++|+
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~~-----~~D~   60 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDAV-----KPTH   60 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHhc-----CCCE
Confidence            6899999999999999999999999986432                        2455555555555432     6899


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc--cc----------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL--HY----------  160 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~--~~----------  160 (259)
                      |||+||....... +...++....+++|+.++.++++++...    +         .+.+++||..  ++          
T Consensus        61 ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g---------v~~v~~sS~~vy~~~~~~p~~~~~  126 (298)
T PLN02778         61 VFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRER----G---------LVLTNYATGCIFEYDDAHPLGSGI  126 (298)
T ss_pred             EEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHh----C---------CCEEEEecceEeCCCCCCCcccCC
Confidence            9999996532211 1112344678899999999999998653    1         1234444322  11          


Q ss_pred             --c----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE-EecccccCCcccCCCChHHHHHHhhhhc---cCCC-
Q 024976          161 --T----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG-IAPGPIKDTAGVSKLAPEEIRSKATDYM---AAYK-  229 (259)
Q Consensus       161 --~----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~-i~pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~-  229 (259)
                        .    +.+....|+.||.+.+.+++..+..    .++|+.. +.++..         ....+...+....   ..++ 
T Consensus       127 ~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~----~~lr~~~~~~~~~~---------~~~~fi~~~~~~~~~~~~~~s  193 (298)
T PLN02778        127 GFKEEDTPNFTGSFYSKTKAMVEELLKNYENV----CTLRVRMPISSDLS---------NPRNFITKITRYEKVVNIPNS  193 (298)
T ss_pred             CCCcCCCCCCCCCchHHHHHHHHHHHHHhhcc----EEeeecccCCcccc---------cHHHHHHHHHcCCCeeEcCCC
Confidence              0    1112357999999999999876432    2355522 111100         0111222222221   1222 


Q ss_pred             CCCHHHHHHHHHHhcC
Q 024976          230 FGEKWDIAMAALYLAS  245 (259)
Q Consensus       230 ~~~~~dva~~~~~l~s  245 (259)
                      +...+|++++++.++.
T Consensus       194 ~~yv~D~v~al~~~l~  209 (298)
T PLN02778        194 MTILDELLPISIEMAK  209 (298)
T ss_pred             CEEHHHHHHHHHHHHh
Confidence            5678899999888875

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.32  E-value=1.3e-10  Score=97.33  Aligned_cols=165  Identities=18%  Similarity=0.140  Sum_probs=117.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChh---hHHHHHHHHH-------hcCCCeEEEEcCCCC------HHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKT---VLRSAVAALH-------SLGIPAIGLEGDVRK------RED   75 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~---~~~~~~~~~~-------~~~~~v~~~~~Dl~~------~~~   75 (259)
                      +++++|||||.+|.-+.+.|..+ -++|++.-|..+   ..+.+.+.+.       ....++..+..|++.      +..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999988865 458888766543   3444444444       235689999999994      344


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 024976           76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS  155 (259)
Q Consensus        76 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is  155 (259)
                      .+++.+       .+|.+|||++....-       ..+.+....|+.|+..+++.+...  +.          -.+.++|
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v-------~pYs~L~~~NVlGT~evlrLa~~g--k~----------Kp~~yVS  134 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV-------FPYSELRGANVLGTAEVLRLAATG--KP----------KPLHYVS  134 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc-------CcHHHhcCcchHhHHHHHHHHhcC--CC----------ceeEEEe
Confidence            444443       699999999964321       125677789999999999988632  11          2288888


Q ss_pred             ccccccc--------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc
Q 024976          156 ATLHYTA--------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  208 (259)
Q Consensus       156 S~~~~~~--------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~  208 (259)
                      |++....                    ......|+-||.+.+-+++...     ..|+++..+.||.+-.+..
T Consensus       135 sisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~-----~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         135 SISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG-----DRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             eeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh-----hcCCCeEEEecCeeeccCc
Confidence            8775321                    1223569999999988888553     3479999999999965443

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.27  E-value=5.4e-10  Score=111.98  Aligned_cols=209  Identities=12%  Similarity=0.052  Sum_probs=132.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcC----CeEEEEeCChhhH---HHHHHHHHhc-------CCCeEEEEcCCCCHHH-
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHG----AAIAIMGRRKTVL---RSAVAALHSL-------GIPAIGLEGDVRKRED-   75 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G----~~vv~~~r~~~~~---~~~~~~~~~~-------~~~v~~~~~Dl~~~~~-   75 (259)
                      ..++++||||+|.||..++++|+++|    .+|+.+.|+....   +...+.+...       ..++.++.+|++++.- 
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35799999999999999999999987    6788888874432   2222222211       1368899999986420 


Q ss_pred             -HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 024976           76 -AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI  154 (259)
Q Consensus        76 -~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i  154 (259)
                       -....+++.   ..+|++||||+....    ..+   +......|+.++.++++.+...    +.        .+++++
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a~~~----~~--------~~~v~v 1107 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLCAEG----KA--------KQFSFV 1107 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHHHhC----CC--------ceEEEE
Confidence             011112221   369999999996432    112   3344567999999998887532    21        469999


Q ss_pred             cccccccc-----------------C-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCC
Q 024976          155 SATLHYTA-----------------T-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  206 (259)
Q Consensus       155 sS~~~~~~-----------------~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~  206 (259)
                      ||...+..                 .           .....|+.||.+.+.+++..+     ..|+++..+.||.+..+
T Consensus      1108 SS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~-----~~g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443      1108 SSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG-----KRGLRGCIVRPGYVTGD 1182 (1389)
T ss_pred             eCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH-----hCCCCEEEECCCccccC
Confidence            99654311                 0           012359999999998887642     23799999999999765


Q ss_pred             cccCCCChHHHH-HHhh-----hhccC----CCCCCHHHHHHHHHHhcCc
Q 024976          207 AGVSKLAPEEIR-SKAT-----DYMAA----YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       207 ~~~~~~~~~~~~-~~~~-----~~~~~----~~~~~~~dva~~~~~l~s~  246 (259)
                      .........+.. ..+.     ...|.    .-+...++++++++.++..
T Consensus      1183 ~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~ 1232 (1389)
T TIGR03443      1183 SKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALN 1232 (1389)
T ss_pred             CCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhC
Confidence            433222222222 1111     11221    2356689999999988753

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.27  E-value=2.2e-10  Score=95.76  Aligned_cols=195  Identities=14%  Similarity=0.067  Sum_probs=110.2

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV   94 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li   94 (259)
                      ++||||+|.||.+++++|+++|++|++++|+.+.......        ..  ..|+.. ..       ..+.+..+|+||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~--~~~~~~-~~-------~~~~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW--------EG--YKPWAP-LA-------ESEALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc--------ee--eecccc-cc-------hhhhcCCCCEEE
Confidence            5899999999999999999999999999998764322110        00  112221 11       122345799999


Q ss_pred             ECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----------c
Q 024976           95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------W  164 (259)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  164 (259)
                      |+||.....  ...+.+.....+++|+.++..+++++...-.+          ...+++.|+...+...          +
T Consensus        63 h~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~----------~~~~i~~S~~~~yg~~~~~~~~E~~~~  130 (292)
T TIGR01777        63 NLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAAAEQK----------PKVFISASAVGYYGTSEDRVFTEEDSP  130 (292)
T ss_pred             ECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCC----------ceEEEEeeeEEEeCCCCCCCcCcccCC
Confidence            999964321  11233455677889999988888887643110          0234444543222110          0


Q ss_pred             -cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHH--HHH-----hhhhccCCCCCCHHHH
Q 024976          165 -YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI--RSK-----ATDYMAAYKFGEKWDI  236 (259)
Q Consensus       165 -~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~dv  236 (259)
                       ....|+..+...+...+    .+. ..++.+..++|+.+..+..  ...+...  ...     +.......-+...+|+
T Consensus       131 ~~~~~~~~~~~~~e~~~~----~~~-~~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dv  203 (292)
T TIGR01777       131 AGDDFLAELCRDWEEAAQ----AAE-DLGTRVVLLRTGIVLGPKG--GALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDL  203 (292)
T ss_pred             CCCChHHHHHHHHHHHhh----hch-hcCCceEEEeeeeEECCCc--chhHHHHHHHhcCcccccCCCCcccccEeHHHH
Confidence             11123333333322222    223 4579999999999986531  1111100  000     0111111236789999


Q ss_pred             HHHHHHhcCc
Q 024976          237 AMAALYLASD  246 (259)
Q Consensus       237 a~~~~~l~s~  246 (259)
                      ++++..++..
T Consensus       204 a~~i~~~l~~  213 (292)
T TIGR01777       204 VQLILFALEN  213 (292)
T ss_pred             HHHHHHHhcC
Confidence            9999999854

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.24  E-value=6e-11  Score=95.15  Aligned_cols=199  Identities=15%  Similarity=0.150  Sum_probs=115.4

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV   94 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li   94 (259)
                      ++||||+|-||++++..|.+.|+.|+++.|+..+.+...      ..       .+...+.+....+      .++|+||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~------~~-------~v~~~~~~~~~~~------~~~DavI   61 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL------HP-------NVTLWEGLADALT------LGIDAVI   61 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc------Cc-------cccccchhhhccc------CCCCEEE
Confidence            589999999999999999999999999999977543311      11       1112222222221      1699999


Q ss_pred             ECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH---
Q 024976           95 NAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS---  170 (259)
Q Consensus        95 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~---  170 (259)
                      |-||..-. +++....-   +..    ..+-+..++.+...+.+...       +.++..-+|..++.+......|.   
T Consensus        62 NLAG~~I~~rrWt~~~K---~~i----~~SRi~~T~~L~e~I~~~~~-------~P~~~isaSAvGyYG~~~~~~~tE~~  127 (297)
T COG1090          62 NLAGEPIAERRWTEKQK---EEI----RQSRINTTEKLVELIAASET-------KPKVLISASAVGYYGHSGDRVVTEES  127 (297)
T ss_pred             ECCCCccccccCCHHHH---HHH----HHHHhHHHHHHHHHHHhccC-------CCcEEEecceEEEecCCCceeeecCC
Confidence            99996432 22332211   122    44566677777777664332       24454455666665543332221   


Q ss_pred             -HHHHHHHHHHHHHHHHhc--CCCCeEEEEEecccccCCc--ccCCCChHHHH---HHhhhhccCCCCCCHHHHHHHHHH
Q 024976          171 -AAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTA--GVSKLAPEEIR---SKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       171 -~sK~a~~~l~~~la~e~~--~~~gi~v~~i~pg~v~t~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                       ...-.+..+++.+-.+..  +..|+||..+.-|.|-.+.  ....+.+....   -.+.+.-+..-|...||+.+++.|
T Consensus       128 ~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~f  207 (297)
T COG1090         128 PPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILF  207 (297)
T ss_pred             CCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHH
Confidence             112234444544433321  3568999999999997543  22222222111   122222222337889999999999


Q ss_pred             hcCc
Q 024976          243 LASD  246 (259)
Q Consensus       243 l~s~  246 (259)
                      ++..
T Consensus       208 ll~~  211 (297)
T COG1090         208 LLEN  211 (297)
T ss_pred             HHhC
Confidence            9965

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.23  E-value=3.6e-11  Score=96.67  Aligned_cols=103  Identities=14%  Similarity=0.137  Sum_probs=80.9

Q ss_pred             CcEEEEeCC-ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa-~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +.+=.||.. +||||+++|+.|+++|++|+++++...        +...    ....+|+++.+++.++++++.+.++++
T Consensus        14 D~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~----~~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        14 DSVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE----PHPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             CCceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc----cCCcceeecHHHHHHHHHHHHHHcCCC
Confidence            345567765 678999999999999999999876311        1100    024589999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH  129 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  129 (259)
                      |++|||||+....++.+.+.++|++.+.   .+.+.+.+
T Consensus        82 DiLVnnAgv~d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        82 DILIHSMAVSDYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             CEEEECCEeccccchhhCCHHHHhhhcc---hhhhhccc
Confidence            9999999987778888899999987744   45556655

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.21  E-value=5.3e-10  Score=93.34  Aligned_cols=179  Identities=16%  Similarity=0.079  Sum_probs=110.4

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC-ccE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDI   92 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~-id~   92 (259)
                      +++||||+|.||+.++++|.++|++|.++.|+.+...         ...+..+.+|+.|.+++..+++.. +.+.. +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeE
Confidence            4899999999999999999999999999999876431         124566789999999999988643 22335 999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      ++++++...       .  ..            ...+.++...++.+.        .+||++||.....+.+       .
T Consensus        71 v~~~~~~~~-------~--~~------------~~~~~~i~aa~~~gv--------~~~V~~Ss~~~~~~~~-------~  114 (285)
T TIGR03649        71 VYLVAPPIP-------D--LA------------PPMIKFIDFARSKGV--------RRFVLLSASIIEKGGP-------A  114 (285)
T ss_pred             EEEeCCCCC-------C--hh------------HHHHHHHHHHHHcCC--------CEEEEeeccccCCCCc-------h
Confidence            999887311       0  00            011233444444443        6799999865433211       2


Q ss_pred             HHHHHHHHHHHHHHhcCC-CCeEEEEEecccccCCcccCCCChHHHHH--Hhhhhcc--CCCCCCHHHHHHHHHHhcCcc
Q 024976          173 KAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRS--KATDYMA--AYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       173 K~a~~~l~~~la~e~~~~-~gi~v~~i~pg~v~t~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~dva~~~~~l~s~~  247 (259)
                      +...+.+       +. . .|+....++|+++.... ...........  .+.....  ...+.+.+|+|+++..++...
T Consensus       115 ~~~~~~~-------l~-~~~gi~~tilRp~~f~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~  185 (285)
T TIGR03649       115 MGQVHAH-------LD-SLGGVEYTVLRPTWFMENF-SEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDK  185 (285)
T ss_pred             HHHHHHH-------HH-hccCCCEEEEeccHHhhhh-cccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCC
Confidence            2222221       22 3 37999999999876332 11110000100  0000001  123778999999999988754

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00016 RNA-binding protein; Provisional

Probab=99.20  E-value=1.3e-09  Score=94.65  Aligned_cols=185  Identities=16%  Similarity=0.147  Sum_probs=113.2

Q ss_pred             CCCcEEEEe----CCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHH-------HHHHhcCCCeEEEEcCCCCHHHHHH
Q 024976           10 LKGKVALLT----GGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV-------AALHSLGIPAIGLEGDVRKREDAVR   78 (259)
Q Consensus        10 l~~k~~lIt----Ga~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~-------~~~~~~~~~v~~~~~Dl~~~~~~~~   78 (259)
                      ...++++||    ||+|.||+.++++|+++|++|++++|+........       .++..  ..+.++.+|+.|   +.+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKS  124 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHh
Confidence            345789999    99999999999999999999999999865422211       12221  247888999876   333


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ++.     ...+|+|||+++.         +.           .+...+    +...++.+.        .++|++||..
T Consensus       125 ~~~-----~~~~d~Vi~~~~~---------~~-----------~~~~~l----l~aa~~~gv--------kr~V~~SS~~  167 (378)
T PLN00016        125 KVA-----GAGFDVVYDNNGK---------DL-----------DEVEPV----ADWAKSPGL--------KQFLFCSSAG  167 (378)
T ss_pred             hhc-----cCCccEEEeCCCC---------CH-----------HHHHHH----HHHHHHcCC--------CEEEEEccHh
Confidence            321     1369999999762         11           122233    333333332        5799999976


Q ss_pred             ccccCcc--------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhh--c--c
Q 024976          159 HYTATWY--------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--M--A  226 (259)
Q Consensus       159 ~~~~~~~--------~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~--~  226 (259)
                      .+.....        ...+. +|...+.+.+        ..++.+..++|+.+..+..... ........+...  .  +
T Consensus       168 vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~--------~~~l~~~ilRp~~vyG~~~~~~-~~~~~~~~~~~~~~i~~~  237 (378)
T PLN00016        168 VYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ--------KLGVNWTSFRPQYIYGPGNNKD-CEEWFFDRLVRGRPVPIP  237 (378)
T ss_pred             hcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH--------HcCCCeEEEeceeEECCCCCCc-hHHHHHHHHHcCCceeec
Confidence            5432110        01122 6777665543        3468999999999986643221 112222222111  1  1


Q ss_pred             C-----CCCCCHHHHHHHHHHhcCc
Q 024976          227 A-----YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 ~-----~~~~~~~dva~~~~~l~s~  246 (259)
                      .     .-+...+|+++++..++..
T Consensus       238 g~g~~~~~~i~v~Dva~ai~~~l~~  262 (378)
T PLN00016        238 GSGIQLTQLGHVKDLASMFALVVGN  262 (378)
T ss_pred             CCCCeeeceecHHHHHHHHHHHhcC
Confidence            1     1256789999999998864

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.19  E-value=9.3e-10  Score=99.75  Aligned_cols=125  Identities=17%  Similarity=0.252  Sum_probs=86.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC---eEEEEeCChh---hHHHHHHHH---------Hh-c--------CCCeE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKT---VLRSAVAAL---------HS-L--------GIPAI   64 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~---~vv~~~r~~~---~~~~~~~~~---------~~-~--------~~~v~   64 (259)
                      -+++|+++||||+|.||..+++.|++.+.   +|+++.|..+   ..+...+++         .+ .        ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            37899999999999999999999998764   5788877532   122222222         11 1        23688


Q ss_pred             EEEcCCCCHH------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhc
Q 024976           65 GLEGDVRKRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG  138 (259)
Q Consensus        65 ~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  138 (259)
                      ++.+|+++++      ..+.+.+       .+|+|||+|+....   .    ++++..+++|+.++.++++++...-   
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f---~----~~~~~a~~vNV~GT~nLLelA~~~~---  258 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF---D----ERYDVAIDINTRGPCHLMSFAKKCK---  258 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc---c----cCHHHHHHHHHHHHHHHHHHHHHcC---
Confidence            9999999872      3333322       59999999996431   1    3467788999999999999876431   


Q ss_pred             CCCCCCCCCCceEEEecccc
Q 024976          139 GRGQASSSSGGIIINISATL  158 (259)
Q Consensus       139 ~~~~~~~~~~g~iv~isS~~  158 (259)
                      .        ..++|++||..
T Consensus       259 ~--------lk~fV~vSTay  270 (605)
T PLN02503        259 K--------LKLFLQVSTAY  270 (605)
T ss_pred             C--------CCeEEEccCce
Confidence            1        13477777754

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.16  E-value=8.6e-10  Score=102.68  Aligned_cols=143  Identities=19%  Similarity=0.166  Sum_probs=99.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ..+++|||||+|.||+++++.|.++|++|..                        ...|++|.+.+.+.++..     ++
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~~-----~p  429 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRNV-----KP  429 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHhh-----CC
Confidence            3458999999999999999999999988731                        124688888888777654     69


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---------  161 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------  161 (259)
                      |+|||+|+....... +...++....+++|+.++.++++++...    +         .+++++||...+.         
T Consensus       430 d~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g---------~~~v~~Ss~~v~~~~~~~~~~~  495 (668)
T PLN02260        430 THVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCREN----G---------LLMMNFATGCIFEYDAKHPEGS  495 (668)
T ss_pred             CEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHc----C---------CeEEEEcccceecCCccccccc
Confidence            999999996432111 1223445788899999999999998753    1         2355555532110         


Q ss_pred             --c-------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 024976          162 --A-------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  200 (259)
Q Consensus       162 --~-------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~p  200 (259)
                        +       .+....|+.||.+.+.+++....    ...+|+..+..
T Consensus       496 ~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~----~~~~r~~~~~~  539 (668)
T PLN02260        496 GIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN----VCTLRVRMPIS  539 (668)
T ss_pred             CCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh----heEEEEEEecc
Confidence              1       12235799999999999987643    23477776653

>PRK12320 hypothetical protein; Provisional

Probab=99.16  E-value=2.2e-09  Score=98.55  Aligned_cols=172  Identities=10%  Similarity=-0.001  Sum_probs=110.5

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||+|.||++++++|.++|++|++++|+....         ....+.++++|+++.. +.+++       ..+|++
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~V   64 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA-------GEADAV   64 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh-------cCCCEE
Confidence            699999999999999999999999999999864321         1235789999999873 33333       268999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK  173 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  173 (259)
                      ||+|+.....            ...+|+.++.++++++..    .+         .++|++||..+.   +  ..|..  
T Consensus        65 IHLAa~~~~~------------~~~vNv~Gt~nLleAA~~----~G---------vRiV~~SS~~G~---~--~~~~~--  112 (699)
T PRK12320         65 IHLAPVDTSA------------PGGVGITGLAHVANAAAR----AG---------ARLLFVSQAAGR---P--ELYRQ--  112 (699)
T ss_pred             EEcCccCccc------------hhhHHHHHHHHHHHHHHH----cC---------CeEEEEECCCCC---C--ccccH--
Confidence            9999853110            114788999998888743    21         469999886432   1  11321  


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCC---CCCHHHHHHHHHHhcCc
Q 024976          174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK---FGEKWDIAMAALYLASD  246 (259)
Q Consensus       174 ~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dva~~~~~l~s~  246 (259)
                        .+.+.    .    ..++.+..+.|+.+..+...... . .....+......++   ....+|++++++.++..
T Consensus       113 --aE~ll----~----~~~~p~~ILR~~nVYGp~~~~~~-~-r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~  176 (699)
T PRK12320        113 --AETLV----S----TGWAPSLVIRIAPPVGRQLDWMV-C-RTVATLLRSKVSARPIRVLHLDDLVRFLVLALNT  176 (699)
T ss_pred             --HHHHH----H----hcCCCEEEEeCceecCCCCcccH-h-HHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhC
Confidence              22221    1    23478888999988876322111 1 11222211111122   24899999999888854

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.06  E-value=2.9e-09  Score=85.69  Aligned_cols=166  Identities=14%  Similarity=0.029  Sum_probs=116.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++++++||||+|.||++++..|..+|+.|+++|--....+...+.... ...+..+.-|+..+     ++.       
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~-------   90 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK-------   90 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH-------
Confidence            46789999999999999999999999999999998765554443333221 23466777777654     333       


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc--------
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY--------  160 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--------  160 (259)
                      .+|-++|.|....+..+...    -.+++..|+.++++++..+....             .|++..|+..-+        
T Consensus        91 evD~IyhLAapasp~~y~~n----pvktIktN~igtln~lglakrv~-------------aR~l~aSTseVYgdp~~hpq  153 (350)
T KOG1429|consen   91 EVDQIYHLAAPASPPHYKYN----PVKTIKTNVIGTLNMLGLAKRVG-------------ARFLLASTSEVYGDPLVHPQ  153 (350)
T ss_pred             HhhhhhhhccCCCCcccccC----ccceeeecchhhHHHHHHHHHhC-------------ceEEEeecccccCCcccCCC
Confidence            47889999886554433322    24678899999999887775432             457777665432        


Q ss_pred             --------ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc
Q 024976          161 --------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  208 (259)
Q Consensus       161 --------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~  208 (259)
                              -+....+.|...|-+.+.|+....++    .||.|....+..+..|.+
T Consensus       154 ~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~----~giE~rIaRifNtyGPrm  205 (350)
T KOG1429|consen  154 VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ----EGIEVRIARIFNTYGPRM  205 (350)
T ss_pred             ccccccccCcCCchhhhhHHHHHHHHHHHHhhcc----cCcEEEEEeeecccCCcc
Confidence                    22345678999998888888876665    458887777766665543

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.99  E-value=1.6e-09  Score=100.99  Aligned_cols=165  Identities=18%  Similarity=0.176  Sum_probs=135.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHH---HhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAAL---HSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~---~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..|+++|+||-||.|.+++..|..+|++ +++..|..-+..--...+   ...|.+|.+-..|++..+..+.++++.. .
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-K 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-h
Confidence            4689999999999999999999999996 888888754433322222   3457788888899999999999998764 4


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++.+.+++|-|....++-+++.++++|++.-+..+.++.++=+.-...-..-          -.+|..||...-.++.++
T Consensus      1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L----------dyFv~FSSvscGRGN~GQ 1915 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL----------DYFVVFSSVSCGRGNAGQ 1915 (2376)
T ss_pred             cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc----------ceEEEEEeecccCCCCcc
Confidence            6899999999998888889999999999999999999999866655443222          348888999988999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALE  186 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e  186 (259)
                      ..|+.+.++++.+.+.-+.+
T Consensus      1916 tNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1916 TNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             cccchhhHHHHHHHHHhhhc
Confidence            99999999999998865444

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.97  E-value=6.9e-09  Score=84.05  Aligned_cols=193  Identities=17%  Similarity=0.115  Sum_probs=113.2

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV   94 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li   94 (259)
                      ++|+||+|.+|+.+++.|.+.|++|.++.|+..  ....+.+...+  +.++.+|+.|.+++.++++       ++|.++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g--~~vv~~d~~~~~~l~~al~-------g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALG--AEVVEADYDDPESLVAALK-------GVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTT--TEEEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhccc--ceEeecccCCHHHHHHHHc-------CCceEE
Confidence            689999999999999999999999999999873  23344454444  5678999999999988876       799999


Q ss_pred             ECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----ccchhhH
Q 024976           95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVS  170 (259)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~  170 (259)
                      ++.+....        ..        ......+++++...-.            -++| .||.......    .+...+-
T Consensus        70 ~~~~~~~~--------~~--------~~~~~~li~Aa~~agV------------k~~v-~ss~~~~~~~~~~~~p~~~~~  120 (233)
T PF05368_consen   70 SVTPPSHP--------SE--------LEQQKNLIDAAKAAGV------------KHFV-PSSFGADYDESSGSEPEIPHF  120 (233)
T ss_dssp             EESSCSCC--------CH--------HHHHHHHHHHHHHHT-------------SEEE-ESEESSGTTTTTTSTTHHHHH
T ss_pred             eecCcchh--------hh--------hhhhhhHHHhhhcccc------------ceEE-EEEecccccccccccccchhh
Confidence            99885331        11        2222344555544322            3466 4554433311    1112222


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH-HHH------HHhhhhccCCCC-CCHHHHHHHHHH
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIR------SKATDYMAAYKF-GEKWDIAMAALY  242 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~------~~~~~~~~~~~~-~~~~dva~~~~~  242 (259)
                      ..|..++.+.+        +.+++.+.|+||... +.......+. ...      .......+...+ .+.+|+++.+..
T Consensus       121 ~~k~~ie~~l~--------~~~i~~t~i~~g~f~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~  191 (233)
T PF05368_consen  121 DQKAEIEEYLR--------ESGIPYTIIRPGFFM-ENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAA  191 (233)
T ss_dssp             HHHHHHHHHHH--------HCTSEBEEEEE-EEH-HHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHH
T ss_pred             hhhhhhhhhhh--------hccccceeccccchh-hhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHH
Confidence            35655554443        336899999999875 2222111110 000      000010000123 378999999999


Q ss_pred             hcCccCCccccccc
Q 024976          243 LASDAAVHRDLIHL  256 (259)
Q Consensus       243 l~s~~~~~~tG~~i  256 (259)
                      ++.++..+.+|..+
T Consensus       192 il~~p~~~~~~~~~  205 (233)
T PF05368_consen  192 ILLDPEKHNNGKTI  205 (233)
T ss_dssp             HHHSGGGTTEEEEE
T ss_pred             HHcChHHhcCCEEE
Confidence            99887665444443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.92  E-value=8.2e-09  Score=89.48  Aligned_cols=83  Identities=27%  Similarity=0.341  Sum_probs=64.4

Q ss_pred             CCCCCcEEEEeCC---------------ccc-hHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCC
Q 024976            8 DILKGKVALLTGG---------------GSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR   71 (259)
Q Consensus         8 ~~l~~k~~lItGa---------------~~g-iG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   71 (259)
                      .+++||+++||||               |+| +|.++|++|+++|++|++++++.+ ++        ..  .....+|++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--------~~--~~~~~~dv~  252 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--------TP--AGVKRIDVE  252 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--------CC--CCcEEEccC
Confidence            4589999999999               445 999999999999999999987653 11        01  113467999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCC
Q 024976           72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVP  104 (259)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  104 (259)
                      +.+++.+.+.   +.++++|++|||||+....+
T Consensus       253 ~~~~~~~~v~---~~~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        253 SAQEMLDAVL---AALPQADIFIMAAAVADYRP  282 (399)
T ss_pred             CHHHHHHHHH---HhcCCCCEEEEccccccccc
Confidence            9888777765   45789999999999765544

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.89  E-value=1.1e-08  Score=85.40  Aligned_cols=84  Identities=24%  Similarity=0.222  Sum_probs=67.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCCh---hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .+++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++...+..+.+..+|+++.+++.+.++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            467899999999 69999999999999996 99999986   66777777776555556667789988777766544   


Q ss_pred             HHcCCccEEEECCCCC
Q 024976           85 NHFGKLDILVNAAAGN  100 (259)
Q Consensus        85 ~~~g~id~li~~ag~~  100 (259)
                          ..|+||||....
T Consensus       199 ----~~DilINaTp~G  210 (289)
T PRK12548        199 ----SSDILVNATLVG  210 (289)
T ss_pred             ----cCCEEEEeCCCC
Confidence                469999998643

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.81  E-value=5.7e-07  Score=79.65  Aligned_cols=228  Identities=15%  Similarity=0.048  Sum_probs=139.5

Q ss_pred             CCCCCcEEEEeCCc-cchHHHHHHHHHHcCCeEEEEeCChhh-HHHHHHHH-H---hcCCCeEEEEcCCCCHHHHHHHHH
Q 024976            8 DILKGKVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAAL-H---SLGIPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus         8 ~~l~~k~~lItGa~-~giG~~~a~~l~~~G~~vv~~~r~~~~-~~~~~~~~-~---~~~~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ..+.+++++||||+ +.||.+++..|+.-|++||+...+.++ ..+..+.+ .   ..+..++++..++.+..+++.+++
T Consensus       392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe  471 (866)
T COG4982         392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE  471 (866)
T ss_pred             CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence            35788999999999 779999999999999999998766432 23333433 2   336778999999999999999998


Q ss_pred             HHHHHcC--------------CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCC
Q 024976           82 STINHFG--------------KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS  147 (259)
Q Consensus        82 ~~~~~~g--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~  147 (259)
                      -|..+.-              .+|.+|-.|.....+.+.+..... +..+++-+.+...++-.+.+.-..++    .. .
T Consensus       472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~----v~-~  545 (866)
T COG4982         472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRG----VD-T  545 (866)
T ss_pred             HhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccC----cc-c
Confidence            8865321              267788778766666666554432 22333333333333333322221221    11 1


Q ss_pred             CceEEEecccc-ccccCccchhhHHHHHHHHHHHHHHHHHh-cCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhc
Q 024976          148 GGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM  225 (259)
Q Consensus       148 ~g~iv~isS~~-~~~~~~~~~~Y~~sK~a~~~l~~~la~e~-~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  225 (259)
                      +-++|.-.|.. +.  +.+-..|+-+|++++.+..-+-.|- . ..-+.+..-..|++..+......  ..+.....+  
T Consensus       546 R~hVVLPgSPNrG~--FGgDGaYgEsK~aldav~~RW~sEs~W-a~~vsl~~A~IGWtrGTGLMg~N--diiv~aiEk--  618 (866)
T COG4982         546 RLHVVLPGSPNRGM--FGGDGAYGESKLALDAVVNRWHSESSW-AARVSLAHALIGWTRGTGLMGHN--DIIVAAIEK--  618 (866)
T ss_pred             ceEEEecCCCCCCc--cCCCcchhhHHHHHHHHHHHhhccchh-hHHHHHhhhheeeeccccccCCc--chhHHHHHH--
Confidence            25566665543 22  2345789999999999887666653 1 11244444456888755432221  111111111  


Q ss_pred             cCCCCCCHHHHHHHHHHhcCccC
Q 024976          226 AAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       226 ~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      ..-|.-+++|+|..++-|++.+.
T Consensus       619 ~GV~tyS~~EmA~~LLgL~saev  641 (866)
T COG4982         619 AGVRTYSTDEMAFNLLGLASAEV  641 (866)
T ss_pred             hCceecCHHHHHHHHHhhccHHH
Confidence            11133478999999999988653

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.77  E-value=1.1e-07  Score=74.81  Aligned_cols=84  Identities=21%  Similarity=0.284  Sum_probs=68.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++++++|+||+|++|+.+++.|++.|++|++++|+.++++...+.+.... ......+|..+.+++.+.++      
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~------   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK------   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh------
Confidence            36789999999999999999999999999999999999888888877775321 24455678888888777664      


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                       ..|++|++...
T Consensus        97 -~~diVi~at~~  107 (194)
T cd01078          97 -GADVVFAAGAA  107 (194)
T ss_pred             -cCCEEEECCCC
Confidence             57999887664

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.76  E-value=6.6e-08  Score=77.95  Aligned_cols=100  Identities=13%  Similarity=0.097  Sum_probs=69.3

Q ss_pred             CcEEEEeCCccc-hHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~g-iG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +.+-.||+.|+| ||+++++.|+++|++|++++|+.... .      .....+.++.++     +..++.+.+.+.++.+
T Consensus        15 D~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-~------~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~   82 (229)
T PRK06732         15 DSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-P------EPHPNLSIIEIE-----NVDDLLETLEPLVKDH   82 (229)
T ss_pred             CCceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-C------CCCCCeEEEEEe-----cHHHHHHHHHHHhcCC
Confidence            346678877766 99999999999999999998764210 0      011245555542     3333444444455689


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchh
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG  123 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  123 (259)
                      |++|||||.....+....+.++|...+++|...
T Consensus        83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             CEEEeCCccCCceehhhhhhhhhhhhhhhhhhh
Confidence            999999998766666667788888888887554

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.73  E-value=5.2e-08  Score=84.20  Aligned_cols=111  Identities=21%  Similarity=0.210  Sum_probs=75.6

Q ss_pred             CCCCCcEEEEeCC---------------ccc-hHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCC
Q 024976            8 DILKGKVALLTGG---------------GSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR   71 (259)
Q Consensus         8 ~~l~~k~~lItGa---------------~~g-iG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   71 (259)
                      .+++||+++||||               ||| +|.++++.|.++|++|++++++....         ...  ....+|++
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~  249 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVS  249 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEec
Confidence            3589999999999               667 99999999999999999987664321         111  23568999


Q ss_pred             CHHHH-HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCC--HHHHHHHHhccchhHHHHHHHHH
Q 024976           72 KREDA-VRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--PNGFRTVIEIDSVGTFIMCHEAL  132 (259)
Q Consensus        72 ~~~~~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~  132 (259)
                      +.+++ ++++++.   ++++|++|+|||+....+....+  .......+.+|+...--+++.+.
T Consensus       250 ~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       250 TAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             cHHHHHHHHHHhh---cccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence            99888 5555443   46899999999987665543211  11112234466666555555444

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.69  E-value=2.2e-06  Score=70.81  Aligned_cols=132  Identities=17%  Similarity=0.050  Sum_probs=91.6

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +.++||||||.+|++++++|.++|++|.+..|+.+......       ..+.+...|+.+...+...++       ++|.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~~   66 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVDG   66 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------cccE
Confidence            36899999999999999999999999999999988766644       358899999999999888876       6889


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      +++..+... ...         ..............+...     .+        ..+++.+|...+..  .....|..+
T Consensus        67 ~~~i~~~~~-~~~---------~~~~~~~~~~~~~a~~a~-----~~--------~~~~~~~s~~~~~~--~~~~~~~~~  121 (275)
T COG0702          67 VLLISGLLD-GSD---------AFRAVQVTAVVRAAEAAG-----AG--------VKHGVSLSVLGADA--ASPSALARA  121 (275)
T ss_pred             EEEEecccc-ccc---------chhHHHHHHHHHHHHHhc-----CC--------ceEEEEeccCCCCC--CCccHHHHH
Confidence            888888543 211         111122222233333322     11        13466666655443  235568999


Q ss_pred             HHHHHHHHHHH
Q 024976          173 KAAVDSITRSL  183 (259)
Q Consensus       173 K~a~~~l~~~l  183 (259)
                      |...+...++.
T Consensus       122 ~~~~e~~l~~s  132 (275)
T COG0702         122 KAAVEAALRSS  132 (275)
T ss_pred             HHHHHHHHHhc
Confidence            98888777643

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.66  E-value=6.4e-07  Score=76.96  Aligned_cols=175  Identities=15%  Similarity=0.090  Sum_probs=108.6

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHH-HHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDA-VRVVEST   83 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~-~~~~~~~   83 (259)
                      ....+.+..+|+|+||+|++|+-+++.|.++|+.|..+-|+.++.+.... +.........+..|.....+. ..+++.+
T Consensus        72 ~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~  150 (411)
T KOG1203|consen   72 PNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVEAV  150 (411)
T ss_pred             CCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhhhc
Confidence            34455677899999999999999999999999999999999887666655 111112244455555554433 3333221


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .   -...+++-++|.-....       +...-..+.+.|..++++++...-.            -++++++|+.+....
T Consensus       151 ~---~~~~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~~~aGv------------k~~vlv~si~~~~~~  208 (411)
T KOG1203|consen  151 P---KGVVIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDACKKAGV------------KRVVLVGSIGGTKFN  208 (411)
T ss_pred             c---ccceeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHHHHhCC------------ceEEEEEeecCcccC
Confidence            1   12557777777533221       2223334667788888888843322            459999998877665


Q ss_pred             ccchhhHHHHHHHHHHH-HHHHHHhcCCCCeEEEEEecccccC
Q 024976          164 WYQIHVSAAKAAVDSIT-RSLALEWGTDYAIRVNGIAPGPIKD  205 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~-~~la~e~~~~~gi~v~~i~pg~v~t  205 (259)
                      .....+..  .....-. +.....+. ..|+.-..|.||..+.
T Consensus       209 ~~~~~~~~--~~~~~~~k~~~e~~~~-~Sgl~ytiIR~g~~~~  248 (411)
T KOG1203|consen  209 QPPNILLL--NGLVLKAKLKAEKFLQ-DSGLPYTIIRPGGLEQ  248 (411)
T ss_pred             CCchhhhh--hhhhhHHHHhHHHHHH-hcCCCcEEEecccccc
Confidence            54443432  1111122 23333444 7889999999998864

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.60  E-value=1.4e-06  Score=68.25  Aligned_cols=190  Identities=17%  Similarity=0.112  Sum_probs=115.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC---eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~---~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++++|||++|-+|+++.+-+.+.|.   +.++.+..                     .+|+++..+.+++|+..     +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESE-----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhcc-----C
Confidence            6899999999999999999999886   35554432                     46999999999999864     5


Q ss_pred             ccEEEECCCCCCCCCCC--CCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-------
Q 024976           90 LDILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-------  160 (259)
Q Consensus        90 id~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------  160 (259)
                      +..|||.|+-.. +-+.  ..+.+-|..    |+.=.-++++.+...-.++            +++..|.+-+       
T Consensus        56 PthVIhlAAmVG-Glf~N~~ynldF~r~----Nl~indNVlhsa~e~gv~K------------~vsclStCIfPdkt~yP  118 (315)
T KOG1431|consen   56 PTHVIHLAAMVG-GLFHNNTYNLDFIRK----NLQINDNVLHSAHEHGVKK------------VVSCLSTCIFPDKTSYP  118 (315)
T ss_pred             CceeeehHhhhc-chhhcCCCchHHHhh----cceechhHHHHHHHhchhh------------hhhhcceeecCCCCCCC
Confidence            778888886321 1111  123333333    4333344555555443322            3333222211       


Q ss_pred             ---------ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc-----cCCCChHHHHHH------
Q 024976          161 ---------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG-----VSKLAPEEIRSK------  220 (259)
Q Consensus       161 ---------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~-----~~~~~~~~~~~~------  220 (259)
                               .+.+.+..|+-+|.-+.-..+..+.+++    -...++.|-.+..|.-     .....|.-..+.      
T Consensus       119 IdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg----~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~  194 (315)
T KOG1431|consen  119 IDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG----RDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRN  194 (315)
T ss_pred             CCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC----CceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhc
Confidence                     2235566799999777766687777765    4556666766654421     222222221111      


Q ss_pred             -------hhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          221 -------ATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       221 -------~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                             .....|++.+....|+|++++|++.+.+.
T Consensus       195 gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~  230 (315)
T KOG1431|consen  195 GTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEG  230 (315)
T ss_pred             CCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcC
Confidence                   12235566677788999999999966543

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.59  E-value=3.2e-06  Score=68.53  Aligned_cols=200  Identities=16%  Similarity=0.119  Sum_probs=131.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++.|-++-|.||+|.+|+-++.+|++.|..|++=.|-.+---...+-+.+.| ++.+...|+.|+++++++++      
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLG-Qvl~~~fd~~DedSIr~vvk------  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLG-QVLFMKFDLRDEDSIRAVVK------  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccccc-ceeeeccCCCCHHHHHHHHH------
Confidence            35778899999999999999999999999999998775432222222222223 59999999999999999997      


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                       .-.+|||.-|.-.+ +.|         +..++|+.++-.+.+.+-..-.            -++|.+|+..+.  ....
T Consensus       130 -~sNVVINLIGrd~eTknf---------~f~Dvn~~~aerlAricke~GV------------erfIhvS~Lgan--v~s~  185 (391)
T KOG2865|consen  130 -HSNVVINLIGRDYETKNF---------SFEDVNVHIAERLARICKEAGV------------ERFIHVSCLGAN--VKSP  185 (391)
T ss_pred             -hCcEEEEeeccccccCCc---------ccccccchHHHHHHHHHHhhCh------------hheeehhhcccc--ccCh
Confidence             45799999995332 222         2345888888888877765433            349999998754  3344


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH--HHHHHhhhhccCCCC--------CCHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE--EIRSKATDYMAAYKF--------GEKWDI  236 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~--------~~~~dv  236 (259)
                      +.|=-+|++-+--+|   .++.     ....|.|.-+..+. . .+...  ...++ ....|+...        ...-||
T Consensus       186 Sr~LrsK~~gE~aVr---dafP-----eAtIirPa~iyG~e-D-rfln~ya~~~rk-~~~~pL~~~GekT~K~PVyV~DV  254 (391)
T KOG2865|consen  186 SRMLRSKAAGEEAVR---DAFP-----EATIIRPADIYGTE-D-RFLNYYASFWRK-FGFLPLIGKGEKTVKQPVYVVDV  254 (391)
T ss_pred             HHHHHhhhhhHHHHH---hhCC-----cceeechhhhcccc-h-hHHHHHHHHHHh-cCceeeecCCcceeeccEEEehH
Confidence            556677877765544   3343     34677887776321 1 11111  11122 233444322        335599


Q ss_pred             HHHHHHhcCccCC
Q 024976          237 AMAALYLASDAAV  249 (259)
Q Consensus       237 a~~~~~l~s~~~~  249 (259)
                      |++++-.+.++.+
T Consensus       255 aa~IvnAvkDp~s  267 (391)
T KOG2865|consen  255 AAAIVNAVKDPDS  267 (391)
T ss_pred             HHHHHHhccCccc
Confidence            9999988877643

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.47  E-value=1.7e-05  Score=60.27  Aligned_cols=188  Identities=13%  Similarity=0.021  Sum_probs=115.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +++.|.||||-.|..+++...++|+.|..+.|+..+....        ..+.+++.|+.|+.++.+.+.       +.|+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~Da   65 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHDA   65 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CCce
Confidence            3688999999999999999999999999999998765332        247789999999999866654       7999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----------c
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----------A  162 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~  162 (259)
                      ||..-|....++      +  +.+.        ...+++...++..+.        .|++.++...++.          |
T Consensus        66 VIsA~~~~~~~~------~--~~~~--------k~~~~li~~l~~agv--------~RllVVGGAGSL~id~g~rLvD~p  121 (211)
T COG2910          66 VISAFGAGASDN------D--ELHS--------KSIEALIEALKGAGV--------PRLLVVGGAGSLEIDEGTRLVDTP  121 (211)
T ss_pred             EEEeccCCCCCh------h--HHHH--------HHHHHHHHHHhhcCC--------eeEEEEcCccceEEcCCceeecCC
Confidence            999988643221      1  1111        114555555555443        6787776665532          2


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ..+...|..+++..+ +.+.|..+    .++.-+-++|.....|...+.- ..--.+.+..........+.+|.|-+++-
T Consensus       122 ~fP~ey~~~A~~~ae-~L~~Lr~~----~~l~WTfvSPaa~f~PGerTg~-yrlggD~ll~n~~G~SrIS~aDYAiA~lD  195 (211)
T COG2910         122 DFPAEYKPEALAQAE-FLDSLRAE----KSLDWTFVSPAAFFEPGERTGN-YRLGGDQLLVNAKGESRISYADYAIAVLD  195 (211)
T ss_pred             CCchhHHHHHHHHHH-HHHHHhhc----cCcceEEeCcHHhcCCccccCc-eEeccceEEEcCCCceeeeHHHHHHHHHH
Confidence            222333555554444 33445554    3488888999877644222110 00000111111111235678888888776


Q ss_pred             hcC
Q 024976          243 LAS  245 (259)
Q Consensus       243 l~s  245 (259)
                      -+.
T Consensus       196 e~E  198 (211)
T COG2910         196 ELE  198 (211)
T ss_pred             HHh
Confidence            553

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.39  E-value=4.9e-06  Score=72.76  Aligned_cols=127  Identities=19%  Similarity=0.259  Sum_probs=86.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcC--C-eEEEEeCChh------hHH-----HHHHHHHhc----CCCeEEEEcC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHG--A-AIAIMGRRKT------VLR-----SAVAALHSL----GIPAIGLEGD   69 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G--~-~vv~~~r~~~------~~~-----~~~~~~~~~----~~~v~~~~~D   69 (259)
                      .-++||+++||||+|++|.-+.+.|.+.-  . ++++.-|...      +++     .+.+.+.+.    -.++..+.+|
T Consensus         8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD   87 (467)
T KOG1221|consen    8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD   87 (467)
T ss_pred             HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence            34789999999999999999999999763  2 4667655321      111     122222222    2468889999


Q ss_pred             CCCHH------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCC
Q 024976           70 VRKRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  143 (259)
Q Consensus        70 l~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  143 (259)
                      +++++      +.+.+.       ..+|++||+|+....       .|.++..+.+|.+|+..+++.+....+-+     
T Consensus        88 i~~~~LGis~~D~~~l~-------~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~l~-----  148 (467)
T KOG1221|consen   88 ISEPDLGISESDLRTLA-------DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVKLK-----  148 (467)
T ss_pred             ccCcccCCChHHHHHHH-------hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhhhh-----
Confidence            99764      333222       379999999995322       24567888999999999999887765432     


Q ss_pred             CCCCCceEEEeccccc
Q 024976          144 SSSSGGIIINISATLH  159 (259)
Q Consensus       144 ~~~~~g~iv~isS~~~  159 (259)
                            .++.+|....
T Consensus       149 ------~~vhVSTAy~  158 (467)
T KOG1221|consen  149 ------ALVHVSTAYS  158 (467)
T ss_pred             ------eEEEeehhhe
Confidence                  3677776554

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.36  E-value=3e-06  Score=75.48  Aligned_cols=77  Identities=26%  Similarity=0.401  Sum_probs=59.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++|+|+++ +|+++++.|+++|++|++++++. +..++..+++...+  +.++..|..+            +..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~------------~~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPE------------EFL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcch------------hHh
Confidence            57899999999888 99999999999999999999875 34444455554433  5677778776            123


Q ss_pred             CCccEEEECCCCC
Q 024976           88 GKLDILVNAAAGN  100 (259)
Q Consensus        88 g~id~li~~ag~~  100 (259)
                      +.+|+||+++|..
T Consensus        67 ~~~d~vv~~~g~~   79 (450)
T PRK14106         67 EGVDLVVVSPGVP   79 (450)
T ss_pred             hcCCEEEECCCCC
Confidence            5799999999964

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.35  E-value=2.7e-06  Score=72.97  Aligned_cols=77  Identities=21%  Similarity=0.330  Sum_probs=65.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +.+||.|+ |+||+.+|+.|++.| .+|.+.+|+.++..++.+...   .++...++|+.|.+.+.++++       ..|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~-------~~d   70 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIK-------DFD   70 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHh-------cCC
Confidence            57899998 999999999999999 789999999887777655542   379999999999999999887       349


Q ss_pred             EEEECCCCC
Q 024976           92 ILVNAAAGN  100 (259)
Q Consensus        92 ~li~~ag~~  100 (259)
                      +||+++...
T Consensus        71 ~VIn~~p~~   79 (389)
T COG1748          71 LVINAAPPF   79 (389)
T ss_pred             EEEEeCCch
Confidence            999999853

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.34  E-value=3.8e-06  Score=62.07  Aligned_cols=78  Identities=24%  Similarity=0.377  Sum_probs=59.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++++++|.|+ ||.|++++..|.+.|++ |.++.|+.++.+.+.+.+.  +..+.+..  +.+..   +..      
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~--~~~~~---~~~------   73 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIP--LEDLE---EAL------   73 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEE--GGGHC---HHH------
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceee--HHHHH---HHH------
Confidence            3689999999998 79999999999999997 9999999999999888882  22344443  33322   222      


Q ss_pred             cCCccEEEECCCCC
Q 024976           87 FGKLDILVNAAAGN  100 (259)
Q Consensus        87 ~g~id~li~~ag~~  100 (259)
                       ...|++|++.+..
T Consensus        74 -~~~DivI~aT~~~   86 (135)
T PF01488_consen   74 -QEADIVINATPSG   86 (135)
T ss_dssp             -HTESEEEE-SSTT
T ss_pred             -hhCCeEEEecCCC
Confidence             2689999998854

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK09620 hypothetical protein; Provisional

Probab=98.33  E-value=7.7e-07  Score=71.61  Aligned_cols=86  Identities=26%  Similarity=0.323  Sum_probs=52.5

Q ss_pred             CCCcEEEEeCCc----------------cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCH
Q 024976           10 LKGKVALLTGGG----------------SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR   73 (259)
Q Consensus        10 l~~k~~lItGa~----------------~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   73 (259)
                      |+||+++||+|.                |.+|.++|++|.++|++|+++++.......   ... .+..+..+..|....
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s~~d~~   76 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEGIIDLQ   76 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEecHHHHH
Confidence            579999999886                999999999999999999988754221100   000 011223333321112


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCC
Q 024976           74 EDAVRVVESTINHFGKLDILVNAAAGNFLVP  104 (259)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  104 (259)
                      +.+.+++++     ..+|++||+|+...+.+
T Consensus        77 ~~l~~~~~~-----~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         77 DKMKSIITH-----EKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             HHHHHHhcc-----cCCCEEEECccccceec
Confidence            222222211     25899999999765443

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.30  E-value=3.9e-06  Score=73.23  Aligned_cols=76  Identities=21%  Similarity=0.332  Sum_probs=60.1

Q ss_pred             EEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+|+.+++++..+++  .+.++.+.++|+.|.+++.++++       ..|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence            689999 9999999999999974  7999999999888877665  45679999999999999988876       4699


Q ss_pred             EEECCCCC
Q 024976           93 LVNAAAGN  100 (259)
Q Consensus        93 li~~ag~~  100 (259)
                      |||++|..
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999953

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.29  E-value=1.7e-06  Score=68.71  Aligned_cols=214  Identities=19%  Similarity=0.123  Sum_probs=133.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH-HHHH-----HhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA-VAAL-----HSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~-~~~~-----~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      |++||||-+|-=|.-+++.|+++|++|..+-|+.+..... .+.+     ...+...+....|++|...+.+++..+   
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i---  105 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI---  105 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc---
Confidence            5999999999999999999999999999776654432221 1112     122456778889999999999999887   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc--cc-----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT--LH-----  159 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~--~~-----  159 (259)
                        .++-+.|.|+..+-+--++.    -+..-++...|++.++.++...-...+         -++-..|+.  .+     
T Consensus       106 --kPtEiYnLaAQSHVkvSFdl----peYTAeVdavGtLRlLdAi~~c~l~~~---------VrfYQAstSElyGkv~e~  170 (376)
T KOG1372|consen  106 --KPTEVYNLAAQSHVKVSFDL----PEYTAEVDAVGTLRLLDAIRACRLTEK---------VRFYQASTSELYGKVQEI  170 (376)
T ss_pred             --CchhhhhhhhhcceEEEeec----ccceeeccchhhhhHHHHHHhcCcccc---------eeEEecccHhhcccccCC
Confidence              57888888885543321222    244556788999999888765432221         233333321  11     


Q ss_pred             ----cccCccchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEecccccCCcccCCCChHHHHHH---------hhhh
Q 024976          160 ----YTATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK---------ATDY  224 (259)
Q Consensus       160 ----~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~---------~~~~  224 (259)
                          ..|+.+.+.|+++|.+..+++-..+..|.  .-.||-+|.=+|.-=+  .+...-......+.         +.+.
T Consensus       171 PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGe--nFVTRKItRsvakI~~gqqe~~~LGNL  248 (376)
T KOG1372|consen  171 PQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGE--NFVTRKITRSVAKISLGQQEKIELGNL  248 (376)
T ss_pred             CcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCcccc--chhhHHHHHHHHHhhhcceeeEEecch
Confidence                24566778899999887666555544432  1346666666664322  11111111111111         1122


Q ss_pred             ccCCCCCCHHHHHHHHHHhcCc
Q 024976          225 MAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       225 ~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      -.+..|+.+.|-.++++..+..
T Consensus       249 ~a~RDWGhA~dYVEAMW~mLQ~  270 (376)
T KOG1372|consen  249 SALRDWGHAGDYVEAMWLMLQQ  270 (376)
T ss_pred             hhhcccchhHHHHHHHHHHHhc
Confidence            2234588899999998887754

>PLN00106 malate dehydrogenase

Probab=98.25  E-value=8.7e-06  Score=68.82  Aligned_cols=150  Identities=13%  Similarity=0.091  Sum_probs=91.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ..++++|||++|.+|..++..|+..+.  +++++|.++  ++...-++.........  .++++..+..+.       +.
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~i--~~~~~~~d~~~~-------l~   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQV--RGFLGDDQLGDA-------LK   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCceE--EEEeCCCCHHHH-------cC
Confidence            457999999999999999999997765  699999877  22222344333222222  232222222232       24


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc----c----
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH----Y----  160 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~----~----  160 (259)
                      ..|++|+.||....      +..++...+..|+.....+.+.+    .+...       .+.++++|....    .    
T Consensus        86 ~aDiVVitAG~~~~------~g~~R~dll~~N~~i~~~i~~~i----~~~~p-------~aivivvSNPvD~~~~i~t~~  148 (323)
T PLN00106         86 GADLVIIPAGVPRK------PGMTRDDLFNINAGIVKTLCEAV----AKHCP-------NALVNIISNPVNSTVPIAAEV  148 (323)
T ss_pred             CCCEEEEeCCCCCC------CCCCHHHHHHHHHHHHHHHHHHH----HHHCC-------CeEEEEeCCCccccHHHHHHH
Confidence            79999999997432      11335667777777655554444    44332       143444444442    1    


Q ss_pred             ----ccCccchhhHHHHHHHHHHHHHHHHHhc
Q 024976          161 ----TATWYQIHVSAAKAAVDSITRSLALEWG  188 (259)
Q Consensus       161 ----~~~~~~~~Y~~sK~a~~~l~~~la~e~~  188 (259)
                          .+++..-.|+.++.-...|-..++.++.
T Consensus       149 ~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        149 LKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             HHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence                2345566788887666667778888876

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.19  E-value=1e-05  Score=68.57  Aligned_cols=74  Identities=20%  Similarity=0.250  Sum_probs=55.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHc-CC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKH-GA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~-G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .++++|+++||||+|.||+.++++|+++ |. ++++++|+.+++..+.+++..         .|+.   ++.       +
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~  211 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------E  211 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------H
Confidence            3689999999999999999999999865 64 799999998877776665521         2222   222       2


Q ss_pred             HcCCccEEEECCCCC
Q 024976           86 HFGKLDILVNAAAGN  100 (259)
Q Consensus        86 ~~g~id~li~~ag~~  100 (259)
                      .+...|++|++++..
T Consensus       212 ~l~~aDiVv~~ts~~  226 (340)
T PRK14982        212 ALPEADIVVWVASMP  226 (340)
T ss_pred             HHccCCEEEECCcCC
Confidence            234689999999964

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.11  E-value=1.3e-05  Score=66.93  Aligned_cols=79  Identities=15%  Similarity=0.203  Sum_probs=68.2

Q ss_pred             EEEEeCCccchHHHHHHHHHH----cCCeEEEEeCChhhHHHHHHHHHhcC----CCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGK----HGAAIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~----~G~~vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      -++|-||||..|.-+++.+++    .|..+.+.+|+++++++..+.+....    ....++.||.+|++++.+++++.  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~--   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA--   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence            478999999999999999999    78889999999999999998886553    22338999999999999999854  


Q ss_pred             HcCCccEEEECCCC
Q 024976           86 HFGKLDILVNAAAG   99 (259)
Q Consensus        86 ~~g~id~li~~ag~   99 (259)
                           -+++||+|-
T Consensus        85 -----~vivN~vGP   93 (423)
T KOG2733|consen   85 -----RVIVNCVGP   93 (423)
T ss_pred             -----EEEEecccc
Confidence                 589999994

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.09  E-value=1.8e-05  Score=66.94  Aligned_cols=150  Identities=14%  Similarity=0.067  Sum_probs=87.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..++.++++|+|++|.||..++..|+.++  .+++++|++  .++...-++.......  ...+.+|..+..+.+     
T Consensus         4 ~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~~--~v~~~td~~~~~~~l-----   74 (321)
T PTZ00325          4 SALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTPA--KVTGYADGELWEKAL-----   74 (321)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcCc--eEEEecCCCchHHHh-----
Confidence            34566799999999999999999999665  469999983  2233233444333222  223444433322222     


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc------
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH------  159 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~------  159 (259)
                        ...|+||+++|....      +.+++...+..|+...-.+.    +.|++.+.        -++|+++|...      
T Consensus        75 --~gaDvVVitaG~~~~------~~~tR~dll~~N~~i~~~i~----~~i~~~~~--------~~iviv~SNPvdv~~~~  134 (321)
T PTZ00325         75 --RGADLVLICAGVPRK------PGMTRDDLFNTNAPIVRDLV----AAVASSAP--------KAIVGIVSNPVNSTVPI  134 (321)
T ss_pred             --CCCCEEEECCCCCCC------CCCCHHHHHHHHHHHHHHHH----HHHHHHCC--------CeEEEEecCcHHHHHHH
Confidence              379999999996322      11235667777776655554    44444432        44666666432      


Q ss_pred             -------cccCccchhhHHHHHHHH--HHHHHHHHHhc
Q 024976          160 -------YTATWYQIHVSAAKAAVD--SITRSLALEWG  188 (259)
Q Consensus       160 -------~~~~~~~~~Y~~sK~a~~--~l~~~la~e~~  188 (259)
                             ..+.+..-.|+.+  .|+  -|-..++..+.
T Consensus       135 ~~~~~~~~sg~p~~~viG~g--~LDs~R~r~~la~~l~  170 (321)
T PTZ00325        135 AAETLKKAGVYDPRKLFGVT--TLDVVRARKFVAEALG  170 (321)
T ss_pred             HHhhhhhccCCChhheeech--hHHHHHHHHHHHHHhC
Confidence                   1233445567775  244  23445555554

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.96  E-value=2.4e-05  Score=69.67  Aligned_cols=81  Identities=17%  Similarity=0.217  Sum_probs=55.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++|||+++ +|+++++.|++.|++|++.+++........+.+...+.  .+.....  ...+   ..      .
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~--~~~~~~~--~~~~---~~------~   67 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGI--KVICGSH--PLEL---LD------E   67 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCC--EEEeCCC--CHHH---hc------C
Confidence            46899999999986 99999999999999999999876444444455554442  3322211  1111   11      1


Q ss_pred             CccEEEECCCCCCCC
Q 024976           89 KLDILVNAAAGNFLV  103 (259)
Q Consensus        89 ~id~li~~ag~~~~~  103 (259)
                      .+|.||+++|+....
T Consensus        68 ~~d~vV~s~gi~~~~   82 (447)
T PRK02472         68 DFDLMVKNPGIPYTN   82 (447)
T ss_pred             cCCEEEECCCCCCCC
Confidence            489999999976443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.88  E-value=0.00011  Score=55.52  Aligned_cols=76  Identities=24%  Similarity=0.372  Sum_probs=56.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+++++++|+|+ |++|.++++.|.+.| .+|.+++|+.++.++..+++....     +..+..+.+++          .
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~   79 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L   79 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c
Confidence            367899999998 799999999999996 679999999888777776664211     22333443332          2


Q ss_pred             CCccEEEECCCCC
Q 024976           88 GKLDILVNAAAGN  100 (259)
Q Consensus        88 g~id~li~~ag~~  100 (259)
                      ...|++|++....
T Consensus        80 ~~~Dvvi~~~~~~   92 (155)
T cd01065          80 AEADLIINTTPVG   92 (155)
T ss_pred             ccCCEEEeCcCCC
Confidence            4799999999854

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.88  E-value=0.0002  Score=75.05  Aligned_cols=179  Identities=13%  Similarity=0.083  Sum_probs=115.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+.++.++|++.+++++.+++..|.++|+.|+++.....    ..+.....+..+..+...-.|...+..+++.+....+
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1827 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTA 1827 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc----ccccccccccccccccccccchHHHHHHHHhhhcccc
Confidence            355788999988999999999999999999887742211    1111111122344456666778888889888887778


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      .++.+||..+..... ....+...+...-...+...|.+.|.+.+.+...+        ++.++.++...|-.+......
T Consensus      1828 ~~~g~i~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~--------~~~~~~vsr~~G~~g~~~~~~ 1898 (2582)
T TIGR02813      1828 QIDGFIHLQPQHKSV-ADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNA--------RASFVTVSRIDGGFGYSNGDA 1898 (2582)
T ss_pred             ccceEEEeccccccc-cccccccccchhhHHHHHHHHHHHHhhchhhccCC--------CeEEEEEEecCCccccCCccc
Confidence            999999988754210 00000000111111334446677777666554332        367888888877666533222


Q ss_pred             h--------HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecc
Q 024976          169 V--------SAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  201 (259)
Q Consensus       169 Y--------~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg  201 (259)
                      .        ....+++.+|+|+++.|+. ...+|...+.|.
T Consensus      1899 ~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P-~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1899 DSGTQQVKAELNQAALAGLTKTLNHEWN-AVFCRALDLAPK 1938 (2582)
T ss_pred             cccccccccchhhhhHHHHHHhHHHHCC-CCeEEEEeCCCC
Confidence            1        2357899999999999997 766777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.88  E-value=6.2e-05  Score=58.48  Aligned_cols=81  Identities=25%  Similarity=0.361  Sum_probs=49.3

Q ss_pred             CCCcEEEEeCC----------------ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCH
Q 024976           10 LKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR   73 (259)
Q Consensus        10 l~~k~~lItGa----------------~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   73 (259)
                      |+||++|||+|                ||-.|.++|+.+..+|++|+++..... ...        ...+..+.  +.+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~i~--v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKVIR--VESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEEE---SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceEEE--ecch
Confidence            57899999976                478999999999999999998876632 111        12355554  4444


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCC
Q 024976           74 EDAVRVVESTINHFGKLDILVNAAAGNFLVP  104 (259)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  104 (259)
                      +   ++.+.+.+.+..-|++|++|++....+
T Consensus        70 ~---em~~~~~~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   70 E---EMLEAVKELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             H---HHHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred             h---hhhhhhccccCcceeEEEecchhheee
Confidence            4   444444555556699999999865543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.85  E-value=0.00024  Score=59.75  Aligned_cols=80  Identities=19%  Similarity=0.213  Sum_probs=55.0

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+|+++++|.++++.+...|++|++++++.++.+.+. +   .+.+.   .+|..+.+..+.+.+.. . ..+
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~---~~~~~~~~~~~~~~~~~-~-~~~  213 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-Q---AGADA---VFNYRAEDLADRILAAT-A-GQG  213 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCCE---EEeCCCcCHHHHHHHHc-C-CCc
Confidence            35799999999999999999999999999999988876554442 2   23221   23444444444433221 1 136


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|.+++++|
T Consensus       214 ~d~vi~~~~  222 (325)
T cd08253         214 VDVIIEVLA  222 (325)
T ss_pred             eEEEEECCc
Confidence            999999987

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.82  E-value=0.00024  Score=58.90  Aligned_cols=75  Identities=17%  Similarity=0.297  Sum_probs=56.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ..+|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+.+...+. +.....|     +.         ....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~-----~~---------~~~~  178 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSMD-----EL---------PLHR  178 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEechh-----hh---------cccC
Confidence            46889999998 6999999999999999999999998888888777754332 2222111     10         1236


Q ss_pred             ccEEEECCCCC
Q 024976           90 LDILVNAAAGN  100 (259)
Q Consensus        90 id~li~~ag~~  100 (259)
                      .|++|++.+..
T Consensus       179 ~DivInatp~g  189 (270)
T TIGR00507       179 VDLIINATSAG  189 (270)
T ss_pred             ccEEEECCCCC
Confidence            89999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.80  E-value=0.00013  Score=60.71  Aligned_cols=76  Identities=28%  Similarity=0.391  Sum_probs=55.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+.+|+++|+|+ ||+|++++..|.+.| .+|++++|+.++.+++.+++.... .+.+   ++    +..       +..
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~---~~----~~~-------~~~  183 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL---DL----ELQ-------EEL  183 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee---cc----cch-------hcc
Confidence            578899999997 899999999999999 689999999988888877765321 1111   11    111       112


Q ss_pred             CCccEEEECCCCC
Q 024976           88 GKLDILVNAAAGN  100 (259)
Q Consensus        88 g~id~li~~ag~~  100 (259)
                      ...|+|||+....
T Consensus       184 ~~~DivInaTp~g  196 (278)
T PRK00258        184 ADFDLIINATSAG  196 (278)
T ss_pred             ccCCEEEECCcCC
Confidence            4689999998754

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.79  E-value=5.9e-05  Score=64.11  Aligned_cols=120  Identities=14%  Similarity=0.192  Sum_probs=68.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcC-------CeEEEEeCChhh--HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHG-------AAIAIMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G-------~~vv~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      -+++||||+|.+|..++..|+..+       .+|++++++...  ++...-++.+..   .....|++...+.       
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~---~~~~~~~~~~~~~-------   72 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA---FPLLKSVVATTDP-------   72 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc---ccccCCceecCCH-------
Confidence            469999999999999999999844       589999986532  222111111100   0111233322222       


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      .+.+...|+||++||.....   ..+.   .+.++.|+.    +++.+.+.+.+...      +.+.++.+|...
T Consensus        73 ~~~l~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~----i~~~i~~~i~~~~~------~~~iiivvsNPv  131 (325)
T cd01336          73 EEAFKDVDVAILVGAMPRKE---GMER---KDLLKANVK----IFKEQGEALDKYAK------KNVKVLVVGNPA  131 (325)
T ss_pred             HHHhCCCCEEEEeCCcCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCC------CCeEEEEecCcH
Confidence            22334799999999974321   1222   445555543    55666666665521      026677777643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.76  E-value=9.8e-05  Score=58.45  Aligned_cols=160  Identities=16%  Similarity=0.179  Sum_probs=105.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHc-CCe-EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKH-GAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~-G~~-vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      -+..++||||+-|-+|..+|..|..+ |.. |++.+-.... +.    ..+.|+   ++-.|+-|..++++++-.     
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~----V~~~GP---yIy~DILD~K~L~eIVVn-----  108 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-AN----VTDVGP---YIYLDILDQKSLEEIVVN-----  108 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hh----hcccCC---chhhhhhccccHHHhhcc-----
Confidence            45569999999999999999999865 775 6655443221 11    111222   567899999998888642     


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----  163 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  163 (259)
                      .+||-+||-.+....     .-+....-..++|+.|..++++.+..+-.+             +..-|.+.+..|.    
T Consensus       109 ~RIdWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vAa~~kL~-------------iFVPSTIGAFGPtSPRN  170 (366)
T KOG2774|consen  109 KRIDWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVAAKHKLK-------------VFVPSTIGAFGPTSPRN  170 (366)
T ss_pred             cccceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHHHHcCee-------------EeecccccccCCCCCCC
Confidence            379999998774321     111223345679999999999988765322             4445555554332    


Q ss_pred             --------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE-eccccc
Q 024976          164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI-APGPIK  204 (259)
Q Consensus       164 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i-~pg~v~  204 (259)
                              .+...|+.||--.+-+-+.+...++    +.+-++ .||.+.
T Consensus       171 PTPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg----~dfr~~rfPg~is  216 (366)
T KOG2774|consen  171 PTPDLTIQRPRTIYGVSKVHAELLGEYFNHRFG----VDFRSMRFPGIIS  216 (366)
T ss_pred             CCCCeeeecCceeechhHHHHHHHHHHHHhhcC----ccceecccCcccc
Confidence                    2344699999888888777766654    555555 466654

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.66  E-value=0.0036  Score=53.05  Aligned_cols=119  Identities=16%  Similarity=0.178  Sum_probs=77.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      +.-+++++.|+|+ |.+|..++..|+..|.  +++++|++.+.++....++....   .++.+. .  .+.+.       
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~-------   70 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD-------   70 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH-------
Confidence            4556789999998 9999999999999987  69999999888887777776542   122222 1  22222       


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                          +...|++|..+|.... +  ..+.   ...++.|.    .+++.+.+.+.+...       .+.+++++...
T Consensus        71 ----~~~adivIitag~~~k-~--g~~R---~dll~~N~----~i~~~i~~~i~~~~~-------~~~vivvsNP~  125 (315)
T PRK00066         71 ----CKDADLVVITAGAPQK-P--GETR---LDLVEKNL----KIFKSIVGEVMASGF-------DGIFLVASNPV  125 (315)
T ss_pred             ----hCCCCEEEEecCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHHHhCC-------CeEEEEccCcH
Confidence                2368999999996422 1  2333   23344443    345555666655432       26777777544

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.65  E-value=0.0015  Score=55.46  Aligned_cols=80  Identities=26%  Similarity=0.299  Sum_probs=57.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ..+++++|+|+++++|.++++.+...|++|++++++.++.+.+ .+   .+..   ...|..+.+..+.+.+...+  ++
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~~~~---~~~~~~~~~~~~~~~~~~~~--~~  235 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KE---LGAD---YVIDYRKEDFVREVRELTGK--RG  235 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCC---eEEecCChHHHHHHHHHhCC--CC
Confidence            4578999999999999999999999999999998887665543 22   2221   12366665555555443321  36


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++++++|
T Consensus       236 ~d~~i~~~g  244 (342)
T cd08266         236 VDVVVEHVG  244 (342)
T ss_pred             CcEEEECCc
Confidence            999999998

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.64  E-value=0.00018  Score=54.44  Aligned_cols=156  Identities=14%  Similarity=0.097  Sum_probs=95.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++.++|.||+|-.|..+.+++.+.+-  +|+++.|+.....+       .+..+....+|.+.+++....       
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-------t~k~v~q~~vDf~Kl~~~a~~-------   80 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-------TDKVVAQVEVDFSKLSQLATN-------   80 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-------ccceeeeEEechHHHHHHHhh-------
Confidence            47889999999999999999999999974  69999988532111       123455667787766654433       


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +..+|+++++-|.-..+.       ..+..+.+.-.-.+.+.|++    ++++.        -.|+.+||..+....  .
T Consensus        81 ~qg~dV~FcaLgTTRgka-------GadgfykvDhDyvl~~A~~A----Ke~Gc--------k~fvLvSS~GAd~sS--r  139 (238)
T KOG4039|consen   81 EQGPDVLFCALGTTRGKA-------GADGFYKVDHDYVLQLAQAA----KEKGC--------KTFVLVSSAGADPSS--R  139 (238)
T ss_pred             hcCCceEEEeeccccccc-------ccCceEeechHHHHHHHHHH----HhCCC--------eEEEEEeccCCCccc--c
Confidence            347999999987432110       01111222222222233332    33443        568989998766544  3


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCC
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  206 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~  206 (259)
                      ..|--.|.-++.=+-.|  .+     =++..+.||++...
T Consensus       140 FlY~k~KGEvE~~v~eL--~F-----~~~~i~RPG~ll~~  172 (238)
T KOG4039|consen  140 FLYMKMKGEVERDVIEL--DF-----KHIIILRPGPLLGE  172 (238)
T ss_pred             eeeeeccchhhhhhhhc--cc-----cEEEEecCcceecc
Confidence            45777776665333222  12     26788899999743

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.59  E-value=0.0037  Score=52.83  Aligned_cols=114  Identities=16%  Similarity=0.220  Sum_probs=73.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++.|.|+ |++|+.++..|+..|  .+|++++++.+..+....++.+.    +....+. .  .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            36889996 899999999999999  47999999998888877777543    1222222 1  22222           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      +...|++|+++|.... +  ..+..   ..++.|    ..+++.+.+.+.+...       .+.++++|...
T Consensus        66 l~~aDIVIitag~~~~-~--g~~R~---dll~~N----~~i~~~~~~~i~~~~~-------~~~vivvsNP~  120 (306)
T cd05291          66 CKDADIVVITAGAPQK-P--GETRL---DLLEKN----AKIMKSIVPKIKASGF-------DGIFLVASNPV  120 (306)
T ss_pred             hCCCCEEEEccCCCCC-C--CCCHH---HHHHHH----HHHHHHHHHHHHHhCC-------CeEEEEecChH
Confidence            1368999999996422 1  22332   333444    4456666666665432       36677777644

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.59  E-value=0.0018  Score=53.35  Aligned_cols=36  Identities=22%  Similarity=0.371  Sum_probs=31.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~   45 (259)
                      .|++.+++|.|++ |+|.++++.|++.|. ++.++|.+
T Consensus        27 kL~~s~VlVvG~G-GVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGIG-GVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4788899999765 999999999999996 69999875

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.58  E-value=0.00071  Score=56.46  Aligned_cols=77  Identities=18%  Similarity=0.145  Sum_probs=55.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+++|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.+.+........+...     +++.+       ..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~-------~~  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAA-------AL  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHh-------hh
Confidence            467899999997 5899999999999998 6999999999988888887643322222221     11111       12


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      ...|+|||+..
T Consensus       191 ~~aDiVInaTp  201 (284)
T PRK12549        191 AAADGLVHATP  201 (284)
T ss_pred             CCCCEEEECCc
Confidence            36899999953

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.58  E-value=0.0024  Score=54.28  Aligned_cols=154  Identities=10%  Similarity=0.089  Sum_probs=97.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC-------eEEEEeCChhh--HHHHHHHHHhcC----CCeEEEEcCCCCHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTV--LRSAVAALHSLG----IPAIGLEGDVRKREDAVR   78 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~-------~vv~~~r~~~~--~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~   78 (259)
                      .+++.|+|++|.+|..++..|+..|.       +++++|.++..  ++....++....    .++.+   .-.+      
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~------   72 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDP------   72 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCc------
Confidence            46899999999999999999998876       69999985433  444444444321    11111   1111      


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                           .+.+..-|++|.+||.... +  ..+.   .+.++.|+    .+++.+.+.+.+...      +.+.++++|...
T Consensus        73 -----~~~~~daDivvitaG~~~k-~--g~tR---~dll~~N~----~i~~~i~~~i~~~~~------~~~iiivvsNPv  131 (322)
T cd01338          73 -----NVAFKDADWALLVGAKPRG-P--GMER---ADLLKANG----KIFTAQGKALNDVAS------RDVKVLVVGNPC  131 (322)
T ss_pred             -----HHHhCCCCEEEEeCCCCCC-C--CCcH---HHHHHHHH----HHHHHHHHHHHhhCC------CCeEEEEecCcH
Confidence                 1223468999999996422 1  2233   33445554    466667777766431      026777777644


Q ss_pred             c--------cc-cCccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEE
Q 024976          159 H--------YT-ATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRV  195 (259)
Q Consensus       159 ~--------~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v  195 (259)
                      -        .. +.+....|+.++.--..|...++..++ ....|+.
T Consensus       132 D~~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         132 NTNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             HHHHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence            2        23 256667888899888888889998876 2334553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.56  E-value=0.0035  Score=46.57  Aligned_cols=113  Identities=18%  Similarity=0.205  Sum_probs=72.4

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc---C-CCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---G-IPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~---~-~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.|+|++|.+|..++..|...+.  +++++|++++.++....++...   . .+..+..   .+++           .+
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~-----------~~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYE-----------AL   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccc-----------cc
Confidence            689999999999999999999875  6999999988888777777543   1 1222222   2222           23


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                      ...|++|..+|....   ...+   -.+.++.|.    .+.+.+.+.+.+...       .+.++.++..
T Consensus        68 ~~aDivvitag~~~~---~g~s---R~~ll~~N~----~i~~~~~~~i~~~~p-------~~~vivvtNP  120 (141)
T PF00056_consen   68 KDADIVVITAGVPRK---PGMS---RLDLLEANA----KIVKEIAKKIAKYAP-------DAIVIVVTNP  120 (141)
T ss_dssp             TTESEEEETTSTSSS---TTSS---HHHHHHHHH----HHHHHHHHHHHHHST-------TSEEEE-SSS
T ss_pred             ccccEEEEecccccc---cccc---HHHHHHHhH----hHHHHHHHHHHHhCC-------ccEEEEeCCc
Confidence            468999999996421   1123   334445554    455555555555432       2667766654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.55  E-value=0.00018  Score=56.81  Aligned_cols=48  Identities=23%  Similarity=0.412  Sum_probs=41.6

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA   55 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~   55 (259)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++.+++.+.++...+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            457899999999996 899999999999999999999988776666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.53  E-value=0.0016  Score=56.45  Aligned_cols=76  Identities=18%  Similarity=0.214  Sum_probs=55.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +.+++++|.|+ |.+|+..++.+...|++|++++|+.++++.+...+   +..   +..+..+.+.+.+.+       ..
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l-------~~  230 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV-------KR  230 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH-------cc
Confidence            56788999987 69999999999999999999999887665544433   211   223455555554443       35


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      .|++|++.+.
T Consensus       231 aDvVI~a~~~  240 (370)
T TIGR00518       231 ADLLIGAVLI  240 (370)
T ss_pred             CCEEEEcccc
Confidence            8999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.53  E-value=0.0026  Score=51.35  Aligned_cols=36  Identities=19%  Similarity=0.346  Sum_probs=31.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~   45 (259)
                      .|++.+++|.|.+ |+|.++++.|++.|. ++.++|.+
T Consensus         8 ~L~~~~VlVvG~G-GvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGLG-GVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECCC-HHHHHHHHHHHHcCCCEEEEECCC
Confidence            4678899999865 999999999999998 59999875

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd00704 MDH Malate dehydrogenase

Probab=97.53  E-value=0.0015  Score=55.48  Aligned_cols=114  Identities=11%  Similarity=0.149  Sum_probs=69.0

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC-------eEEEEeCCh--hhHHHHHHHHHhcCCCeEEEEcCCCCHHH--HH--HHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKRED--AV--RVV   80 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~--~~--~~~   80 (259)
                      ++.||||+|.+|..++..|+..|.       .++++|++.  +.++.              ...|+.|...  ..  .+-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g--------------~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG--------------VVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce--------------eeeehhhhcccccCCcEEe
Confidence            589999999999999999998663       499999886  43222              3334443310  00  000


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEecccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATL  158 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~isS~~  158 (259)
                      ....+.+...|++|+.||.... +  ..+   -.+.+..|    ..+++.+.+.+.+.. .       .+.++++|...
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~-~--g~t---R~dll~~N----~~i~~~i~~~i~~~~~~-------~~iiivvsNPv  129 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRK-P--GME---RADLLRKN----AKIFKEQGEALNKVAKP-------TVKVLVVGNPA  129 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCC-c--CCc---HHHHHHHh----HHHHHHHHHHHHHhCCC-------CeEEEEeCCcH
Confidence            1223344579999999996422 1  123   33444445    456677777776652 2       26677776543

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.51  E-value=0.00094  Score=56.50  Aligned_cols=105  Identities=10%  Similarity=0.065  Sum_probs=57.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHH-c--CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           13 KVALLTGGGSGIGFEISLQLGK-H--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~-~--G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++++|+||+|+||.+++..|.. .  +..++++++++. .+...-++........+..++-.+   +       .+.+..
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d---~-------~~~l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGED---P-------TPALEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCC---H-------HHHcCC
Confidence            4789999999999999998865 2  346888888743 221111222211111111111112   1       112236


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhc
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG  138 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  138 (259)
                      .|++|.++|......   .+   -...+..|....-.    +.+.|.+.
T Consensus        70 ~DiVIitaG~~~~~~---~~---R~dll~~N~~i~~~----ii~~i~~~  108 (312)
T PRK05086         70 ADVVLISAGVARKPG---MD---RSDLFNVNAGIVKN----LVEKVAKT  108 (312)
T ss_pred             CCEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHH----HHHHHHHh
Confidence            999999999743221   22   34455566554444    45555444

>PRK06849 hypothetical protein; Provisional

Probab=97.47  E-value=0.0019  Score=56.44  Aligned_cols=83  Identities=14%  Similarity=0.211  Sum_probs=54.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +.|+|||||++.++|..+++.|.+.|++|++++.+........+.+.    ....+...-.+.+...+.+.++.+.. ++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d----~~~~~p~p~~d~~~~~~~L~~i~~~~-~i   77 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD----GFYTIPSPRWDPDAYIQALLSIVQRE-NI   77 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh----heEEeCCCCCCHHHHHHHHHHHHHHc-CC
Confidence            46899999999999999999999999999999988654432222221    12222223344444444444444443 58


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |++|-...
T Consensus        78 d~vIP~~e   85 (389)
T PRK06849         78 DLLIPTCE   85 (389)
T ss_pred             CEEEECCh
Confidence            99998776

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.44  E-value=0.00077  Score=59.16  Aligned_cols=75  Identities=17%  Similarity=0.210  Sum_probs=55.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++.+|+++|.|+ ||+|+.++.+|++.|+ ++.++.|+.++.+.+.+++..    .     .....++..+.       
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~-----~~~~~~~l~~~-------  239 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----A-----SAHYLSELPQL-------  239 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----C-----eEecHHHHHHH-------
Confidence            3588999999998 8999999999999997 599999998877777766531    1     11222333222       


Q ss_pred             cCCccEEEECCCC
Q 024976           87 FGKLDILVNAAAG   99 (259)
Q Consensus        87 ~g~id~li~~ag~   99 (259)
                      +...|+||++.+.
T Consensus       240 l~~aDiVI~aT~a  252 (414)
T PRK13940        240 IKKADIIIAAVNV  252 (414)
T ss_pred             hccCCEEEECcCC
Confidence            3468999999984

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.43  E-value=0.002  Score=51.00  Aligned_cols=82  Identities=21%  Similarity=0.346  Sum_probs=54.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC-------------------hhhHHHHHHHHHhcCCCeE--E
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLGIPAI--G   65 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~-------------------~~~~~~~~~~~~~~~~~v~--~   65 (259)
                      ..|++++++|.| .||+|.++++.|+..|. ++.++|++                   ..+.+.+.+.+++.++.+.  .
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            357889999998 55999999999999998 69999886                   2344445556655444433  3


Q ss_pred             EEcCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        66 ~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      +..++. ++.+.+++       ...|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        96 LKERVT-AENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             ehhcCC-HHHHHHHH-------hCCCEEEECCC
Confidence            333443 23333332       36788888764

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK14968 putative methyltransferase; Provisional

Probab=97.43  E-value=0.0035  Score=48.68  Aligned_cols=79  Identities=19%  Similarity=0.198  Sum_probs=57.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCC---eEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~---v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++++-.|++.|.   ++..+++++.+|+.++.+++..+...+.+...+.+   +.++.+|+.+.     +    .+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~----~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----F----RG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----c----cc-
Confidence            367889999988776   56666777889999999988877777766544332   77888887542     1    11 


Q ss_pred             cCCccEEEECCCCCCC
Q 024976           87 FGKLDILVNAAAGNFL  102 (259)
Q Consensus        87 ~g~id~li~~ag~~~~  102 (259)
                       +.+|.++.|..+...
T Consensus        89 -~~~d~vi~n~p~~~~  103 (188)
T PRK14968         89 -DKFDVILFNPPYLPT  103 (188)
T ss_pred             -cCceEEEECCCcCCC
Confidence             269999999886543

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.42  E-value=0.0015  Score=55.83  Aligned_cols=81  Identities=20%  Similarity=0.306  Sum_probs=57.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh---------------------hhHHHHHHHHHhcCC--CeE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---------------------TVLRSAVAALHSLGI--PAI   64 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~---------------------~~~~~~~~~~~~~~~--~v~   64 (259)
                      .|++++|+|.|+ ||+|..+++.|++.|. ++.++|++.                     .+.+.+.+.+++.++  ++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            478899999997 5899999999999998 699998863                     234445566665544  455


Q ss_pred             EEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        65 ~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      .+..|++ .+.+.+++       ...|++|.+..
T Consensus       100 ~~~~~~~-~~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVT-VEELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEeccCC-HHHHHHHh-------cCCCEEEEcCC
Confidence            6666775 33444443       36788888765

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.40  E-value=0.0013  Score=54.78  Aligned_cols=80  Identities=16%  Similarity=0.166  Sum_probs=55.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+++|+++|.|+ ||-+++++..|++.|+ ++.+++|+.++.+.+.+.+............+   .....+..       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH-------
Confidence            467899999998 7999999999999998 58999999988888887775321111111122   22221111       


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ...|+|||+...
T Consensus       193 ~~~divINaTp~  204 (283)
T PRK14027        193 AAADGVVNATPM  204 (283)
T ss_pred             hhcCEEEEcCCC
Confidence            258999999864

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.39  E-value=0.00043  Score=62.78  Aligned_cols=48  Identities=23%  Similarity=0.369  Sum_probs=42.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL   56 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~   56 (259)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3578999999999 59999999999999999999999988777776655

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.35  E-value=0.0014  Score=54.75  Aligned_cols=79  Identities=18%  Similarity=0.226  Sum_probs=55.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++|.|+ ||.|++++.+|++.|+ +|.++.|+.++.+++.+.+.... .+..    +...+++..       ..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~~----~~~~~~~~~-------~~  188 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VITR----LEGDSGGLA-------IE  188 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-ccee----ccchhhhhh-------cc
Confidence            467899999976 7999999999999998 59999999988888877764321 1111    111122211       12


Q ss_pred             CCccEEEECCCCC
Q 024976           88 GKLDILVNAAAGN  100 (259)
Q Consensus        88 g~id~li~~ag~~  100 (259)
                      ...|+|||+....
T Consensus       189 ~~~DiVInaTp~g  201 (282)
T TIGR01809       189 KAAEVLVSTVPAD  201 (282)
T ss_pred             cCCCEEEECCCCC
Confidence            4689999998753

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.34  E-value=0.0013  Score=58.30  Aligned_cols=82  Identities=21%  Similarity=0.209  Sum_probs=57.4

Q ss_pred             CCCCCcEEEEeCC----------------ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCC
Q 024976            8 DILKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR   71 (259)
Q Consensus         8 ~~l~~k~~lItGa----------------~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   71 (259)
                      .+|+||++|||+|                ||-.|.++|+.+..+|++|.++.-...        + .....+.++.++  
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~-~~p~~v~~i~V~--  320 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------L-ADPQGVKVIHVE--  320 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------C-CCCCCceEEEec--
Confidence            4689999999976                477999999999999999998863321        0 112335555443  


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCC
Q 024976           72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVP  104 (259)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  104 (259)
                         +.+++.+++.+.+. .|++|++|++..+.+
T Consensus       321 ---ta~eM~~av~~~~~-~Di~I~aAAVaDyrp  349 (475)
T PRK13982        321 ---SARQMLAAVEAALP-ADIAIFAAAVADWRV  349 (475)
T ss_pred             ---CHHHHHHHHHhhCC-CCEEEEeccccceee
Confidence               34555555555554 799999999765543

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.27  E-value=0.0077  Score=54.14  Aligned_cols=85  Identities=20%  Similarity=0.196  Sum_probs=56.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCH-------------HH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-------------ED   75 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-------------~~   75 (259)
                      ...+.+++|+|++ .+|+..+..+...|++|+++|++.++++...+ +   |.+  ++..|..+.             +.
T Consensus       162 ~~pg~kVlViGaG-~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l---GA~--~v~i~~~e~~~~~~gya~~~s~~~  234 (509)
T PRK09424        162 KVPPAKVLVIGAG-VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M---GAE--FLELDFEEEGGSGDGYAKVMSEEF  234 (509)
T ss_pred             CcCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCe--EEEeccccccccccchhhhcchhH
Confidence            3568899999875 99999999999999999999999887654433 3   433  333333221             11


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCC
Q 024976           76 AVRVVESTINHFGKLDILVNAAAGN  100 (259)
Q Consensus        76 ~~~~~~~~~~~~g~id~li~~ag~~  100 (259)
                      .++..+.+.+..+..|++|.++|..
T Consensus       235 ~~~~~~~~~~~~~gaDVVIetag~p  259 (509)
T PRK09424        235 IKAEMALFAEQAKEVDIIITTALIP  259 (509)
T ss_pred             HHHHHHHHHhccCCCCEEEECCCCC
Confidence            1222222222235799999999963

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.27  E-value=0.0017  Score=55.30  Aligned_cols=77  Identities=21%  Similarity=0.369  Sum_probs=52.0

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC--C
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--K   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g--~   89 (259)
                      |+++||+||+||+|...+......|+.++++..+.++.+ ..+   +.+.+..+   |..+.+    +.+++++..+  .
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~---~lGAd~vi---~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK---ELGADHVI---NYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH---hcCCCEEE---cCCccc----HHHHHHHHcCCCC
Confidence            899999999999999999999999987776666655444 333   33432222   233333    4444444433  5


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|+++...|.
T Consensus       212 vDvv~D~vG~  221 (326)
T COG0604         212 VDVVLDTVGG  221 (326)
T ss_pred             ceEEEECCCH
Confidence            9999999994

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.24  E-value=0.0037  Score=53.48  Aligned_cols=81  Identities=21%  Similarity=0.308  Sum_probs=54.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh---------------------hhHHHHHHHHHhcCC--CeE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---------------------TVLRSAVAALHSLGI--PAI   64 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~---------------------~~~~~~~~~~~~~~~--~v~   64 (259)
                      .|++++|+|.|+ ||+|..++..|++.|. ++.++|++.                     .+.+.+.+.+++.++  ++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            477889999998 6999999999999999 699998863                     233334455554443  345


Q ss_pred             EEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        65 ~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      .+..+++ .+.+.+++       ...|++|.+..
T Consensus       100 ~~~~~~~-~~~~~~~~-------~~~DlVid~~D  125 (339)
T PRK07688        100 AIVQDVT-AEELEELV-------TGVDLIIDATD  125 (339)
T ss_pred             EEeccCC-HHHHHHHH-------cCCCEEEEcCC
Confidence            5556665 33333333       35788887744

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.23  E-value=0.0024  Score=53.01  Aligned_cols=78  Identities=23%  Similarity=0.374  Sum_probs=58.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.++++++|.|++ |-+++++..|++.|+ +++++.|+.++.+++.+.+...+..+..  .+..+.+...          
T Consensus       123 ~~~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~~----------  189 (283)
T COG0169         123 DVTGKRVLILGAG-GAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGLE----------  189 (283)
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--cccccccccc----------
Confidence            4568999999875 899999999999996 6999999999999999888765432221  2222222211          


Q ss_pred             CCccEEEECCCCC
Q 024976           88 GKLDILVNAAAGN  100 (259)
Q Consensus        88 g~id~li~~ag~~  100 (259)
                       ..|++||+....
T Consensus       190 -~~dliINaTp~G  201 (283)
T COG0169         190 -EADLLINATPVG  201 (283)
T ss_pred             -ccCEEEECCCCC
Confidence             379999998754

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.21  E-value=0.0016  Score=55.63  Aligned_cols=80  Identities=11%  Similarity=0.202  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|.+++|+|++|++|..++..+...|++|+.+.++.++.+.+.+.+   +... ++  |-.+.++..+.+.+...  +++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~-vi--~~~~~~~~~~~i~~~~~--~gv  222 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDD-AF--NYKEEPDLDAALKRYFP--NGI  222 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCce-eE--EcCCcccHHHHHHHhCC--CCc
Confidence            5789999999999999999888888999998888876655544323   3221 12  22222233333333221  469


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |+++.+.|
T Consensus       223 d~v~d~~g  230 (338)
T cd08295         223 DIYFDNVG  230 (338)
T ss_pred             EEEEECCC
Confidence            99999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.19  E-value=0.0048  Score=50.36  Aligned_cols=36  Identities=25%  Similarity=0.372  Sum_probs=32.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~   45 (259)
                      .|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            478899999998 8999999999999998 58888764

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.19  E-value=0.0019  Score=57.84  Aligned_cols=72  Identities=19%  Similarity=0.305  Sum_probs=52.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+...+.+..     ..  .+.   ++..        ...
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~-----~~--~~~---~~~~--------~l~  389 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQG-----KA--FPL---ESLP--------ELH  389 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----ce--ech---hHhc--------ccC
Confidence            567899999996 6999999999999999999999988777666554421     11  111   1111        124


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      ..|+||++...
T Consensus       390 ~~DiVInatP~  400 (477)
T PRK09310        390 RIDIIINCLPP  400 (477)
T ss_pred             CCCEEEEcCCC
Confidence            68999999864

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.19  E-value=0.0023  Score=51.55  Aligned_cols=75  Identities=16%  Similarity=0.286  Sum_probs=57.6

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +.++|.|++ -+|+.+|+.|.+.|++|++++++++..++..++-    ...+.+.+|-++++.++++=      ....|+
T Consensus         1 m~iiIiG~G-~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~----~~~~~v~gd~t~~~~L~~ag------i~~aD~   69 (225)
T COG0569           1 MKIIIIGAG-RVGRSVARELSEEGHNVVLIDRDEERVEEFLADE----LDTHVVIGDATDEDVLEEAG------IDDADA   69 (225)
T ss_pred             CEEEEECCc-HHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh----cceEEEEecCCCHHHHHhcC------CCcCCE
Confidence            356677665 8999999999999999999999988766643321    24788999999998877761      125788


Q ss_pred             EEECCC
Q 024976           93 LVNAAA   98 (259)
Q Consensus        93 li~~ag   98 (259)
                      +|...|
T Consensus        70 vva~t~   75 (225)
T COG0569          70 VVAATG   75 (225)
T ss_pred             EEEeeC
Confidence            887776

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.18  E-value=0.0023  Score=53.49  Aligned_cols=43  Identities=19%  Similarity=0.252  Sum_probs=37.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS   51 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~   51 (259)
                      ..+.|++++|+|. |++|+++++.|...|++|.+++|+.++.+.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4688999999999 569999999999999999999998765433

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.18  E-value=0.0022  Score=54.48  Aligned_cols=117  Identities=12%  Similarity=0.130  Sum_probs=69.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC-------eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHH--HHH--HH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAV--RVV--ES   82 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~--~~~--~~   82 (259)
                      ++.|+|++|.+|..++..|+..|.       .++++|++++..            .......|+.|.....  ...  ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            478999999999999999998654       499999865421            0122344444443110  000  01


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ..+.+...|++|+.||....      +.+++...+..|+    .+++.+.+.+.+...      +.+.++++|...
T Consensus        69 ~~~~~~~aDiVVitAG~~~~------~~~tr~~ll~~N~----~i~k~i~~~i~~~~~------~~~iiivvsNPv  128 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPRK------EGMERRDLLSKNV----KIFKEQGRALDKLAK------KDCKVLVVGNPA  128 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCCC------CCCcHHHHHHHHH----HHHHHHHHHHHhhCC------CCeEEEEeCCcH
Confidence            13344579999999996422      1123455555554    456666777666521      026677776543

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.16  E-value=0.0083  Score=53.84  Aligned_cols=84  Identities=20%  Similarity=0.181  Sum_probs=57.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-------------HHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-------------RED   75 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-------------~~~   75 (259)
                      ...+.+++|.|+ |.+|...+..+...|++|++++++.++++...+ +   +  ..++..|..+             .+.
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---G--a~~v~v~~~e~g~~~~gYa~~~s~~~  233 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---G--AEFLELDFKEEGGSGDGYAKVMSEEF  233 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---C--CeEEeccccccccccccceeecCHHH
Confidence            456789999996 799999999999999999999998876544332 2   2  3444555422             233


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCC
Q 024976           76 AVRVVESTINHFGKLDILVNAAAG   99 (259)
Q Consensus        76 ~~~~~~~~~~~~g~id~li~~ag~   99 (259)
                      .++..+.+.+.....|++|+++-+
T Consensus       234 ~~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       234 IAAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHHhCCCCEEEECccc
Confidence            333334444445679999999943

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.15  E-value=0.0038  Score=52.87  Aligned_cols=75  Identities=24%  Similarity=0.383  Sum_probs=51.0

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+.+++|+|+++++|+++++.+...|++|+.+.++.++.+.+    ...+.. .++  |.   +++.+.+    .....+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~~-~~~--~~---~~~~~~~----~~~~~~  227 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGAD-YVI--DG---SKFSEDV----KKLGGA  227 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCCc-EEE--ec---HHHHHHH----HhccCC
Confidence            478999999999999999999999999999888876654443    222221 112  22   1122222    223479


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |++++++|.
T Consensus       228 d~v~~~~g~  236 (332)
T cd08259         228 DVVIELVGS  236 (332)
T ss_pred             CEEEECCCh
Confidence            999999883

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.14  E-value=0.0038  Score=54.34  Aligned_cols=81  Identities=22%  Similarity=0.354  Sum_probs=54.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC-------------------hhhHHHHHHHHHhcCCCe--EEE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLGIPA--IGL   66 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~-------------------~~~~~~~~~~~~~~~~~v--~~~   66 (259)
                      .+++++++|.|+ ||+|..++..|+..|. ++.++|++                   ..+.+.+.+.+.+.++.+  ..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            467889999966 6999999999999999 59999887                   344555566665544433  334


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        67 ~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      ...+. .+.+.+++       ...|+||++..
T Consensus       211 ~~~~~-~~~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVT-SDNVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             eccCC-hHHHHHHH-------hCCCEEEECCC
Confidence            33333 23333333       25788887765

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.12  E-value=0.002  Score=55.43  Aligned_cols=81  Identities=12%  Similarity=0.196  Sum_probs=53.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|.+++|+|++|++|..++..+...|++|+.++++.++.+.+.+++   +.+.. +  |-.+.+.+.+.+.+...  ++
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~v-i--~~~~~~~~~~~i~~~~~--~g  228 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEA-F--NYKEEPDLDAALKRYFP--EG  228 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEE-E--ECCCcccHHHHHHHHCC--CC
Confidence            35789999999999999999888888999988888776655443333   33222 2  22222223333332221  36


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|+++.+.|
T Consensus       229 vD~v~d~vG  237 (348)
T PLN03154        229 IDIYFDNVG  237 (348)
T ss_pred             cEEEEECCC
Confidence            999999988

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.11  E-value=0.0025  Score=53.16  Aligned_cols=77  Identities=16%  Similarity=0.156  Sum_probs=60.6

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ...++|-||+|-.|.-++++|+++|.+.++.+|+..++..+.+.+.   .....+  ++-++..++++++       ..+
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG---~~~~~~--p~~~p~~~~~~~~-------~~~   73 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG---PEAAVF--PLGVPAALEAMAS-------RTQ   73 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC---cccccc--CCCCHHHHHHHHh-------cce
Confidence            4578999999999999999999999999999999999998888773   222233  3334555555554       689


Q ss_pred             EEEECCCCC
Q 024976           92 ILVNAAAGN  100 (259)
Q Consensus        92 ~li~~ag~~  100 (259)
                      +|+||+|-.
T Consensus        74 VVlncvGPy   82 (382)
T COG3268          74 VVLNCVGPY   82 (382)
T ss_pred             EEEeccccc
Confidence            999999953

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.11  E-value=0.0082  Score=49.03  Aligned_cols=79  Identities=22%  Similarity=0.322  Sum_probs=52.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ..+++++|+|+++ +|+++++.+...|.+|++++++.++.+.+ +++   +.. ..  .|..+.+....+.   ....+.
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~--~~~~~~~~~~~~~---~~~~~~  201 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GAD-HV--IDYKEEDLEEELR---LTGGGG  201 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCc-ee--ccCCcCCHHHHHH---HhcCCC
Confidence            4678999999998 99999999999999999998887654443 222   221 11  2333333333322   122347


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|+++++++.
T Consensus       202 ~d~vi~~~~~  211 (271)
T cd05188         202 ADVVIDAVGG  211 (271)
T ss_pred             CCEEEECCCC
Confidence            9999999883

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.11  E-value=0.0044  Score=51.82  Aligned_cols=81  Identities=22%  Similarity=0.245  Sum_probs=52.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh---hhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~---~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ++++|+++|.|+ ||-+++++..|+..|+ +|.++.|+.   ++.+.+.+.+.... ..+.+.  ++   ++...+    
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~--~~---~~~~~l----  190 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT--DL---ADQQAF----  190 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe--ch---hhhhhh----
Confidence            468899999997 5669999999999998 599999985   46666666654321 112221  22   111111    


Q ss_pred             HHHcCCccEEEECCCC
Q 024976           84 INHFGKLDILVNAAAG   99 (259)
Q Consensus        84 ~~~~g~id~li~~ag~   99 (259)
                      .+.....|+|||+...
T Consensus       191 ~~~~~~aDivINaTp~  206 (288)
T PRK12749        191 AEALASADILTNGTKV  206 (288)
T ss_pred             hhhcccCCEEEECCCC
Confidence            1122468999998754

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.10  E-value=0.0034  Score=53.72  Aligned_cols=77  Identities=9%  Similarity=0.142  Sum_probs=51.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .+++|+||+|++|..++..+...|+ +|+.+.++.++.+.+.+++   |.+.. +  |..+ +++.+.+.++..  +++|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~v-i--~~~~-~~~~~~i~~~~~--~gvd  226 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAA-I--NYKT-DNVAERLRELCP--EGVD  226 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEE-E--ECCC-CCHHHHHHHHCC--CCce
Confidence            8999999999999999988888899 7999888877655544433   33222 2  2222 122222332221  3699


Q ss_pred             EEEECCC
Q 024976           92 ILVNAAA   98 (259)
Q Consensus        92 ~li~~ag   98 (259)
                      +++.+.|
T Consensus       227 ~vid~~g  233 (345)
T cd08293         227 VYFDNVG  233 (345)
T ss_pred             EEEECCC
Confidence            9999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.09  E-value=0.0039  Score=51.49  Aligned_cols=81  Identities=9%  Similarity=0.113  Sum_probs=55.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +-.|.|++|++|+|.+|.-+...-.-+|++|+.+.-..++..-+.+++.   -+   ...|-.++    ++.+++.+..+
T Consensus       148 pk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG---fD---~~idyk~~----d~~~~L~~a~P  217 (340)
T COG2130         148 PKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG---FD---AGIDYKAE----DFAQALKEACP  217 (340)
T ss_pred             CCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC---Cc---eeeecCcc----cHHHHHHHHCC
Confidence            3568999999999999987766555679999998877777666665542   11   12233333    33333444443


Q ss_pred             -CccEEEECCCC
Q 024976           89 -KLDILVNAAAG   99 (259)
Q Consensus        89 -~id~li~~ag~   99 (259)
                       .||+.+-|.|.
T Consensus       218 ~GIDvyfeNVGg  229 (340)
T COG2130         218 KGIDVYFENVGG  229 (340)
T ss_pred             CCeEEEEEcCCc
Confidence             79999999994

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.02  E-value=0.0047  Score=54.65  Aligned_cols=73  Identities=16%  Similarity=0.279  Sum_probs=52.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++.+.+.+++.   .       +..+.++..+.+       
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g---~-------~~~~~~~~~~~l-------  240 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG---G-------EAIPLDELPEAL-------  240 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---C-------cEeeHHHHHHHh-------
Confidence            478999999987 8999999999999998 69999999887766665542   1       111223332222       


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ...|++|.+.|.
T Consensus       241 ~~aDvVI~aT~s  252 (423)
T PRK00045        241 AEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEECCCC
Confidence            357888888773

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.02  E-value=0.00085  Score=43.33  Aligned_cols=35  Identities=29%  Similarity=0.446  Sum_probs=23.3

Q ss_pred             CC-cEEEEeCCccchHHH--HHHHHHHcCCeEEEEeCCh
Q 024976           11 KG-KVALLTGGGSGIGFE--ISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        11 ~~-k~~lItGa~~giG~~--~a~~l~~~G~~vv~~~r~~   46 (259)
                      .| |++||+|+|+|.|++  ++..| ..|++.+.+....
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            44 899999999999999  55555 6788888776543

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.01  E-value=0.0029  Score=53.77  Aligned_cols=79  Identities=8%  Similarity=0.119  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|.+++|+|++|++|..++..+...|++|+.+.++.++.+.+ ++   .+.+..+   |-.+.+...+.++....  +++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~---lGa~~vi---~~~~~~~~~~~~~~~~~--~gv  208 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KK---LGFDVAF---NYKTVKSLEETLKKASP--DGY  208 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCCEEE---eccccccHHHHHHHhCC--CCe
Confidence            578999999999999999988888899999888877654443 33   3432222   22222233333333321  369


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |+++.+.|
T Consensus       209 dvv~d~~G  216 (325)
T TIGR02825       209 DCYFDNVG  216 (325)
T ss_pred             EEEEECCC
Confidence            99999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.00  E-value=0.0051  Score=51.51  Aligned_cols=80  Identities=23%  Similarity=0.309  Sum_probs=54.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ..+++++|+|+++++|+.++..+...|++|++++++.+..+.+ +++   +.+   ...+..+.+..+++.+ ... .++
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~-~~~-~~~  208 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKE-ATG-GRG  208 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHH-HhC-CCC
Confidence            3578999999999999999999999999999998887655544 322   322   1233333333333322 111 136


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|.++++.|
T Consensus       209 ~d~vi~~~g  217 (323)
T cd05276         209 VDVILDMVG  217 (323)
T ss_pred             eEEEEECCc
Confidence            999999998

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.99  E-value=0.01  Score=43.68  Aligned_cols=78  Identities=21%  Similarity=0.453  Sum_probs=53.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC-------------------hhhHHHHHHHHHhcC--CCeEEEEcC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLG--IPAIGLEGD   69 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~-------------------~~~~~~~~~~~~~~~--~~v~~~~~D   69 (259)
                      +++++|.|++ ++|.++++.|+..|. ++.++|.+                   ..+.+.+++.+....  .++..+..+
T Consensus         2 ~~~v~iiG~G-~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGAG-GVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEESTS-HHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECcC-HHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            5788888865 999999999999999 58899863                   234455556665443  345666666


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           70 VRKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        70 l~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      + +.+...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            6 3455555553       5788888755

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.99  E-value=0.0084  Score=48.39  Aligned_cols=81  Identities=16%  Similarity=0.299  Sum_probs=53.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC-------------------hhhHHHHHHHHHhcCCC--eEEE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLGIP--AIGL   66 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~-------------------~~~~~~~~~~~~~~~~~--v~~~   66 (259)
                      .|++++++|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.++..++.  +..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            477889999985 5999999999999999 48888653                   23344455556555443  4455


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        67 ~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      ..+++ .+.+.+++       ..+|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence            55553 33333333       35788888766

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.98  E-value=0.0027  Score=52.06  Aligned_cols=74  Identities=19%  Similarity=0.177  Sum_probs=54.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++|+|||+- |+.+++.|.++|++|+...+.....+...+    .+  ...+..+..+.+++.+++.+     .++|.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g--~~~v~~g~l~~~~l~~~l~~-----~~i~~   68 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ--ALTVHTGALDPQELREFLKR-----HSIDI   68 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC--CceEEECCCCHHHHHHHHHh-----cCCCE
Confidence            37999999998 999999999999999988777654332221    11  22355667778887777654     37999


Q ss_pred             EEECCC
Q 024976           93 LVNAAA   98 (259)
Q Consensus        93 li~~ag   98 (259)
                      ||+.+.
T Consensus        69 VIDAtH   74 (256)
T TIGR00715        69 LVDATH   74 (256)
T ss_pred             EEEcCC
Confidence            999975

This enzyme was found to be a monomer by gel filtration.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.95  E-value=0.009  Score=53.76  Aligned_cols=79  Identities=20%  Similarity=0.157  Sum_probs=54.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++|+++|.|+ |++|.++|+.|.++|++|.+++++.. ......+.+.+.+  +.++..+-..             .
T Consensus        12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g--v~~~~~~~~~-------------~   75 (480)
T PRK01438         12 SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG--ATVRLGPGPT-------------L   75 (480)
T ss_pred             cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC--CEEEECCCcc-------------c
Confidence            4578899999997 67999999999999999999986543 3334445565544  3443322111             0


Q ss_pred             cCCccEEEECCCCCCC
Q 024976           87 FGKLDILVNAAAGNFL  102 (259)
Q Consensus        87 ~g~id~li~~ag~~~~  102 (259)
                      ....|.+|..+|+...
T Consensus        76 ~~~~D~Vv~s~Gi~~~   91 (480)
T PRK01438         76 PEDTDLVVTSPGWRPD   91 (480)
T ss_pred             cCCCCEEEECCCcCCC
Confidence            1258999999997543

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.94  E-value=0.006  Score=53.83  Aligned_cols=73  Identities=27%  Similarity=0.330  Sum_probs=52.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+.+++++|.|+ |.+|+.+++.|...| .+|++++|+.++.+...+.+.   .  ..+     +.+++.+.+       
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g---~--~~i-----~~~~l~~~l-------  238 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG---G--EAV-----KFEDLEEYL-------  238 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---C--eEe-----eHHHHHHHH-------
Confidence            578899999997 899999999999999 579999999877666655442   1  111     122333333       


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ...|++|.+.+.
T Consensus       239 ~~aDvVi~aT~s  250 (417)
T TIGR01035       239 AEADIVISSTGA  250 (417)
T ss_pred             hhCCEEEECCCC
Confidence            258999999773

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.94  E-value=0.0085  Score=47.77  Aligned_cols=36  Identities=22%  Similarity=0.435  Sum_probs=32.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~   45 (259)
                      .|++++++|.|+ ||+|..+++.|++.|.. +.++|.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            477889999996 69999999999999995 9999886

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.92  E-value=0.0058  Score=51.73  Aligned_cols=73  Identities=21%  Similarity=0.288  Sum_probs=53.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.+++++|.|+ |.+|+.+++.|.+.|. +|++++|+.++.+++.+++.   .  .     ..+.+++.+.+       
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~--~-----~~~~~~~~~~l-------  236 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---G--N-----AVPLDELLELL-------  236 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---C--e-----EEeHHHHHHHH-------
Confidence            368999999987 8999999999999775 68899999887777766652   2  1     11223333333       


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ...|++|.+.+.
T Consensus       237 ~~aDvVi~at~~  248 (311)
T cd05213         237 NEADVVISATGA  248 (311)
T ss_pred             hcCCEEEECCCC
Confidence            257999999984

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.92  E-value=0.0099  Score=49.07  Aligned_cols=77  Identities=14%  Similarity=0.282  Sum_probs=52.1

Q ss_pred             EEEeCCccchHHHHHHHHHHcC----CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           15 ALLTGGGSGIGFEISLQLGKHG----AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G----~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +.|+|++|.+|..++..|+..|    .+|+++|.++++++....+++..........+-.++  +..       +.+...
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~--d~~-------~~~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITD--DPY-------EAFKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECC--chH-------HHhCCC
Confidence            4689998899999999999999    689999999888887777775432211000111111  111       122368


Q ss_pred             cEEEECCCCC
Q 024976           91 DILVNAAAGN  100 (259)
Q Consensus        91 d~li~~ag~~  100 (259)
                      |++|..+|..
T Consensus        72 DiVv~t~~~~   81 (263)
T cd00650          72 DVVIITAGVG   81 (263)
T ss_pred             CEEEECCCCC
Confidence            9999999964

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.91  E-value=0.0095  Score=51.39  Aligned_cols=62  Identities=21%  Similarity=0.185  Sum_probs=45.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh-------------------hhHHHHHHHHHhcCCC--eEEE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIP--AIGL   66 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~-------------------~~~~~~~~~~~~~~~~--v~~~   66 (259)
                      .|++++++|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+++.+.+.++.  +..+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            478899999988 6999999999999999 488888752                   3455566666655444  3344


Q ss_pred             EcCCC
Q 024976           67 EGDVR   71 (259)
Q Consensus        67 ~~Dl~   71 (259)
                      ...++
T Consensus       104 ~~~i~  108 (355)
T PRK05597        104 VRRLT  108 (355)
T ss_pred             EeecC
Confidence            44444

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.91  E-value=0.0032  Score=48.17  Aligned_cols=39  Identities=18%  Similarity=0.247  Sum_probs=34.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .++.||+++|+|++.-+|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999999976679999999999999999998863

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.88  E-value=0.0092  Score=53.15  Aligned_cols=78  Identities=22%  Similarity=0.231  Sum_probs=52.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +.+|+++|+|.+ ++|.++++.|+++|++|++.+.+....  ..+++......+.+...... ..    .+       ..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~-~~----~~-------~~   67 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLK-DA----LD-------NG   67 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCC-HH----HH-------hC
Confidence            678999999986 999999999999999999998765421  12233322123444443322 11    11       25


Q ss_pred             ccEEEECCCCCCC
Q 024976           90 LDILVNAAAGNFL  102 (259)
Q Consensus        90 id~li~~ag~~~~  102 (259)
                      .|.||..+|+...
T Consensus        68 ~d~vv~spgi~~~   80 (445)
T PRK04308         68 FDILALSPGISER   80 (445)
T ss_pred             CCEEEECCCCCCC
Confidence            8999999998643

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.88  E-value=0.0058  Score=43.51  Aligned_cols=71  Identities=25%  Similarity=0.305  Sum_probs=53.2

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV   94 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li   94 (259)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++++++..+...+.    +  +.++.+|.++++.++++=      ..+.+.+|
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~----~--~~~i~gd~~~~~~l~~a~------i~~a~~vv   67 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE----G--VEVIYGDATDPEVLERAG------IEKADAVV   67 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT----T--SEEEES-TTSHHHHHHTT------GGCESEEE
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc----c--cccccccchhhhHHhhcC------ccccCEEE
Confidence            5677775 799999999999877999999998765544332    3  779999999999987752      13678887


Q ss_pred             ECCC
Q 024976           95 NAAA   98 (259)
Q Consensus        95 ~~ag   98 (259)
                      ....
T Consensus        68 ~~~~   71 (116)
T PF02254_consen   68 ILTD   71 (116)
T ss_dssp             EESS
T ss_pred             EccC
Confidence            7766

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.88  E-value=0.0046  Score=51.45  Aligned_cols=38  Identities=26%  Similarity=0.329  Sum_probs=34.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      .+++||+++|.|+++-.|+.++..|.++|++|.++.|+
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            46899999999999889999999999999999888774

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.85  E-value=0.006  Score=54.39  Aligned_cols=60  Identities=12%  Similarity=0.246  Sum_probs=45.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRV   79 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   79 (259)
                      +++|.|+ |.+|+++++.|.++|+.|++++++.+..+...+..     .+.++.+|.++.+.++++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----DVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----CEEEEEeCCCCHHHHHHc
Confidence            6888887 89999999999999999999999887766544321     356667777776654443

>PRK04148 hypothetical protein; Provisional

Probab=96.84  E-value=0.0034  Score=45.92  Aligned_cols=56  Identities=16%  Similarity=0.212  Sum_probs=44.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE   74 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   74 (259)
                      +++++++.|.+  .|.+++..|.+.|++|+.+|.++...+...+.      .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCC
Confidence            56789999987  78889999999999999999998865544332      3678889998753

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.81  E-value=0.014  Score=46.10  Aligned_cols=36  Identities=17%  Similarity=0.391  Sum_probs=32.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~   45 (259)
                      .|+.++++|.|+ ||+|..++..|++.|. +++++|++
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            477889999998 5899999999999999 59999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.80  E-value=0.015  Score=50.76  Aligned_cols=73  Identities=21%  Similarity=0.355  Sum_probs=56.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +|++++++|.|++ -+|.-++++|.++|. +|+++.|+.++.+++.+++.          .+....+++...+       
T Consensus       175 ~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~----------~~~~~l~el~~~l-------  236 (414)
T COG0373         175 SLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG----------AEAVALEELLEAL-------  236 (414)
T ss_pred             ccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC----------CeeecHHHHHHhh-------
Confidence            4899999999985 799999999999996 58899999999888888874          2333344444333       


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ...|+||.+.|.
T Consensus       237 ~~~DvVissTsa  248 (414)
T COG0373         237 AEADVVISSTSA  248 (414)
T ss_pred             hhCCEEEEecCC
Confidence            367888888774

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.80  E-value=0.0088  Score=50.73  Aligned_cols=73  Identities=22%  Similarity=0.338  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|++++|+|.+ |+|...++.....|++|+.++|+.++++...+ +   +.+.. +  |-+|.+.++.+.+       .+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l---GAd~~-i--~~~~~~~~~~~~~-------~~  230 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L---GADHV-I--NSSDSDALEAVKE-------IA  230 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h---CCcEE-E--EcCCchhhHHhHh-------hC
Confidence            48999999999 99998888888899999999999887554433 3   33222 2  3335555444433       28


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |++|.+++
T Consensus       231 d~ii~tv~  238 (339)
T COG1064         231 DAIIDTVG  238 (339)
T ss_pred             cEEEECCC
Confidence            99999988

>PLN00203 glutamyl-tRNA reductase

Probab=96.79  E-value=0.0075  Score=54.47  Aligned_cols=76  Identities=11%  Similarity=0.224  Sum_probs=54.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.+++++|.|+ |.+|+.++++|...|+ +|+++.|+.++.+.+.+++.  +..+.+     ...++..+.+       
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~-----~~~~dl~~al-------  327 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIY-----KPLDEMLACA-------  327 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEe-----ecHhhHHHHH-------
Confidence            478999999999 8999999999999997 59999999888877776653  111111     1222332322       


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ...|+||.+.+.
T Consensus       328 ~~aDVVIsAT~s  339 (519)
T PLN00203        328 AEADVVFTSTSS  339 (519)
T ss_pred             hcCCEEEEccCC
Confidence            367999988763

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.78  E-value=0.038  Score=46.76  Aligned_cols=116  Identities=9%  Similarity=0.102  Sum_probs=73.6

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCC---CeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..++.|+|+ |.+|..++..|+..|.  +++++|.+.+.++....++....+   ...+...  .|.+.           
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------
Confidence            358899996 9999999999998875  599999998877777777764321   1122211  22222           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      +...|++|.++|.... +  ..+..   ..++.|    .-+++.+.+.+.+...       .+.++++|...
T Consensus        69 ~~~adivvitaG~~~k-~--g~~R~---dll~~N----~~i~~~~~~~i~~~~p-------~~~vivvsNP~  123 (312)
T cd05293          69 TANSKVVIVTAGARQN-E--GESRL---DLVQRN----VDIFKGIIPKLVKYSP-------NAILLVVSNPV  123 (312)
T ss_pred             hCCCCEEEECCCCCCC-C--CCCHH---HHHHHH----HHHHHHHHHHHHHhCC-------CcEEEEccChH
Confidence            2368999999996432 1  23333   334444    3456666666665432       36777777654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.77  E-value=0.017  Score=47.02  Aligned_cols=36  Identities=28%  Similarity=0.457  Sum_probs=31.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~   45 (259)
                      .|++.+++|.|++ |+|..++..|+..|. ++.++|++
T Consensus        21 ~L~~~~VlvvG~G-glGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        21 ALKASRVLIVGLG-GLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHhCCcEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4778899999865 999999999999998 48888875

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.77  E-value=0.0086  Score=51.41  Aligned_cols=79  Identities=24%  Similarity=0.275  Sum_probs=51.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH-cC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~-~g   88 (259)
                      -+|+.+||.||+||+|.+.+......|+..+++.++.+. .++.+.+   +.+   ...|-.+++-    ++++++. .+
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k~l---GAd---~vvdy~~~~~----~e~~kk~~~~  224 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVKKL---GAD---EVVDYKDENV----VELIKKYTGK  224 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHHHc---CCc---EeecCCCHHH----HHHHHhhcCC
Confidence            467899999999999999999888899554444444333 3334433   321   2346666333    3333332 46


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      ++|+|+-|.|.
T Consensus       225 ~~DvVlD~vg~  235 (347)
T KOG1198|consen  225 GVDVVLDCVGG  235 (347)
T ss_pred             CccEEEECCCC
Confidence            89999999995

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.75  E-value=0.14  Score=43.56  Aligned_cols=124  Identities=15%  Similarity=0.175  Sum_probs=71.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +++.+++.|+|+ |.+|..++..++..|. +|+++|.+++..+...-++...    +....+..  .+|.+.        
T Consensus         3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~--------   71 (321)
T PTZ00082          3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED--------   71 (321)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH--------
Confidence            456689999995 7899999999999995 8999999887543222222111    11222221  123221        


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                         +..-|++|.++|......-.+.+++. .+.+..|+    .+.+.+.+.+.+...       .+.++++|...
T Consensus        72 ---l~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p-------~a~~iv~sNP~  131 (321)
T PTZ00082         72 ---IAGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCP-------NAFVIVITNPL  131 (321)
T ss_pred             ---hCCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCC-------CeEEEEecCcH
Confidence               23689999999964321111112121 33344443    456667777765532       25677766544

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.73  E-value=0.041  Score=44.07  Aligned_cols=42  Identities=29%  Similarity=0.325  Sum_probs=36.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA   55 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~   55 (259)
                      ++.|+||+|.+|.+++..|++.|++|++.+|+.++.+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            589999999999999999999999999999998777665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.72  E-value=0.013  Score=49.70  Aligned_cols=79  Identities=10%  Similarity=0.140  Sum_probs=51.7

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|.+++|+||++++|..++......|++|+.+.++.++.+.+.+    .+.+. ++  |-.+++..++ +.+...  ++
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~----~Ga~~-vi--~~~~~~~~~~-v~~~~~--~g  211 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE----LGFDA-VF--NYKTVSLEEA-LKEAAP--DG  211 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCE-EE--eCCCccHHHH-HHHHCC--CC
Confidence            357899999999999999988888899999988887765444332    33322 22  2222222222 222211  36


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|+++.+.|
T Consensus       212 vd~vld~~g  220 (329)
T cd08294         212 IDCYFDNVG  220 (329)
T ss_pred             cEEEEECCC
Confidence            999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.72  E-value=0.0058  Score=51.32  Aligned_cols=40  Identities=20%  Similarity=0.312  Sum_probs=35.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV   48 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~   48 (259)
                      ..+.+++++|.|. |++|+.++..|...|++|.+++|+.+.
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4578999999997 679999999999999999999998664

>PRK08223 hypothetical protein; Validated

Probab=96.71  E-value=0.012  Score=48.80  Aligned_cols=37  Identities=24%  Similarity=0.294  Sum_probs=32.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK   46 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~   46 (259)
                      .|++.+++|.|++ |+|..++..|+..|. ++.++|.+.
T Consensus        24 kL~~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         24 RLRNSRVAIAGLG-GVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHhcCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            4778899999875 999999999999999 488998763

>PLN02602 lactate dehydrogenase

Probab=96.69  E-value=0.13  Score=44.30  Aligned_cols=115  Identities=13%  Similarity=0.177  Sum_probs=72.9

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++.|+|+ |.+|..++..|+..|.  +++++|.+++.++....++....   .... +... .+.+           .+
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy~-----------~~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDYA-----------VT  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCHH-----------Hh
Confidence            69999996 8999999999998876  59999999887777776665432   1222 2211 1222           12


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ..-|++|.+||.... +  ..+..   +.+..|    ..+++.+.+.+.+...       .+.+++++...
T Consensus       104 ~daDiVVitAG~~~k-~--g~tR~---dll~~N----~~I~~~i~~~I~~~~p-------~~ivivvtNPv  157 (350)
T PLN02602        104 AGSDLCIVTAGARQI-P--GESRL---NLLQRN----VALFRKIIPELAKYSP-------DTILLIVSNPV  157 (350)
T ss_pred             CCCCEEEECCCCCCC-c--CCCHH---HHHHHH----HHHHHHHHHHHHHHCC-------CeEEEEecCch
Confidence            368999999996422 1  22332   333333    4456666666665432       36677777544

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.68  E-value=0.016  Score=44.70  Aligned_cols=32  Identities=19%  Similarity=0.420  Sum_probs=27.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCe-EEEEeCCh
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRK   46 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~   46 (259)
                      +++|.|+ ||+|..+++.|++.|.. +.++|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3678885 79999999999999995 99999875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.62  E-value=0.015  Score=45.83  Aligned_cols=36  Identities=33%  Similarity=0.468  Sum_probs=30.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~   45 (259)
                      .+++++++|.|++ |+|.++++.|+..|.. +.++|.+
T Consensus        18 ~L~~s~VlIiG~g-glG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGLK-GLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            4678899999755 6999999999999995 8888764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.58  E-value=0.016  Score=49.05  Aligned_cols=79  Identities=13%  Similarity=0.223  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+.+++|.|+++++|.+++..+.+.|++|+.+.++.++.+.+.+.+   +.. .++  |..+.+..++ +.+...  +.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~~--~~~~~~~~~~-v~~~~~--~~~  215 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AAI--NYKTPDLAEA-LKEAAP--DGI  215 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eEE--ecCChhHHHH-HHHhcc--CCc
Confidence            5789999999999999999999999999999988876655443323   221 122  2223222222 222221  469


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |+++.+.|
T Consensus       216 d~vi~~~g  223 (329)
T cd05288         216 DVYFDNVG  223 (329)
T ss_pred             eEEEEcch
Confidence            99999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.56  E-value=0.026  Score=44.45  Aligned_cols=36  Identities=33%  Similarity=0.526  Sum_probs=30.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~   45 (259)
                      .+++.+++|.|++ |+|.++++.|+..|.+ +.++|.+
T Consensus        16 ~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            4677899999876 5999999999999996 8888865

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.51  E-value=0.058  Score=45.89  Aligned_cols=119  Identities=13%  Similarity=0.161  Sum_probs=70.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC-------eEEEEeCCh--hhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRK--TVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      -++.|+|++|.+|..++..|+..|.       +++++|.+.  +.++....++.... ......  .++         ..
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~--~i~---------~~   72 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGV--VAT---------TD   72 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCc--EEe---------cC
Confidence            4789999999999999999998884       799999865  33555555554332 100000  011         01


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      -.+.+..-|++|.+||... ++  ..+   -.+.+..|+    .+++.+.+.+.+...+      .+.++++|...
T Consensus        73 ~~~~~~daDvVVitAG~~~-k~--g~t---R~dll~~Na----~i~~~i~~~i~~~~~~------~~iiivvsNPv  132 (323)
T TIGR01759        73 PEEAFKDVDAALLVGAFPR-KP--GME---RADLLSKNG----KIFKEQGKALNKVAKK------DVKVLVVGNPA  132 (323)
T ss_pred             hHHHhCCCCEEEEeCCCCC-CC--CCc---HHHHHHHHH----HHHHHHHHHHHhhCCC------CeEEEEeCCcH
Confidence            1222346899999999642 11  223   334455554    4556666666554210      26677776543

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.51  E-value=0.009  Score=43.43  Aligned_cols=96  Identities=16%  Similarity=0.098  Sum_probs=51.3

Q ss_pred             CCCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhc--------CCCeEEEEcCCC
Q 024976            1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSL--------GIPAIGLEGDVR   71 (259)
Q Consensus         1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~--------~~~v~~~~~Dl~   71 (259)
                      |++|...  -..-++-|+|+ |-+|.++++.|.+.|+.|..+ .|+....+.+.+.+...        -.+...+-+-+.
T Consensus         1 ~~~~~~~--~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavp   77 (127)
T PF10727_consen    1 MNTPATQ--AARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVP   77 (127)
T ss_dssp             -------------EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-
T ss_pred             CCccccC--CCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEec
Confidence            6666432  22458899998 689999999999999998876 55555555555444211        012223333344


Q ss_pred             CHHHHHHHHHHHHHH--cCCccEEEECCCCC
Q 024976           72 KREDAVRVVESTINH--FGKLDILVNAAAGN  100 (259)
Q Consensus        72 ~~~~~~~~~~~~~~~--~g~id~li~~ag~~  100 (259)
                      |. .+..+++++...  +.+=.+|+|+.|..
T Consensus        78 Dd-aI~~va~~La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   78 DD-AIAEVAEQLAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             CC-HHHHHHHHHHCC--S-TT-EEEES-SS-
T ss_pred             hH-HHHHHHHHHHHhccCCCCcEEEECCCCC
Confidence            43 777777777654  22335899999953

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.51  E-value=0.16  Score=42.99  Aligned_cols=115  Identities=17%  Similarity=0.189  Sum_probs=73.4

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC-----CCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG-----IPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++.|.|+ |.+|..+|..|+.+|.  +++++|.+++.++....++....     .++.+...   +.+.           
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y~~-----------   65 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DYDD-----------   65 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CHHH-----------
Confidence            3678898 8999999999998886  59999999887777777776432     13333322   3222           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      +..-|++|-.||.... +  ..+.+ -.+.++.|    ..+++-+.+.+.+...       .+.++.+|-..
T Consensus        66 ~~~aDivvitaG~~~k-p--g~tr~-R~dll~~N----~~I~~~i~~~i~~~~p-------~~i~ivvsNPv  122 (307)
T cd05290          66 CADADIIVITAGPSID-P--GNTDD-RLDLAQTN----AKIIREIMGNITKVTK-------EAVIILITNPL  122 (307)
T ss_pred             hCCCCEEEECCCCCCC-C--CCCch-HHHHHHHH----HHHHHHHHHHHHHhCC-------CeEEEEecCcH
Confidence            2368999999996422 1  12210 12334444    4567777777776542       36666666654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.50  E-value=0.02  Score=48.73  Aligned_cols=118  Identities=17%  Similarity=0.241  Sum_probs=70.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcC----CCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .+.+++.|+|| |.+|..++..++..| .+++++|.+.+.++...-++....    ... .+.+ -+|.+.         
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~-~i~~-~~d~~~---------   70 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNI-NILG-TNNYED---------   70 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCe-EEEe-CCCHHH---------
Confidence            35678999997 889999999999999 689999998776543333332221    111 1111 123222         


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                        +..-|++|.++|.....   ..+.   ...+..|.    -+.+.+.+.+.+...       .+.++++|...
T Consensus        71 --l~~ADiVVitag~~~~~---g~~r---~dll~~n~----~i~~~i~~~i~~~~p-------~a~vivvsNP~  125 (319)
T PTZ00117         71 --IKDSDVVVITAGVQRKE---EMTR---EDLLTING----KIMKSVAESVKKYCP-------NAFVICVTNPL  125 (319)
T ss_pred             --hCCCCEEEECCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHHCC-------CeEEEEecChH
Confidence              23679999999863221   1222   33444554    456666666665432       25577666544

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.50  E-value=0.027  Score=48.89  Aligned_cols=36  Identities=25%  Similarity=0.471  Sum_probs=31.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~   45 (259)
                      .+++.+++|.|++ |+|..++..|+..|. ++.++|.+
T Consensus        38 ~l~~~~VliiG~G-glG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIGAG-GLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4778899999875 999999999999998 69999875

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.49  E-value=0.0099  Score=44.02  Aligned_cols=39  Identities=23%  Similarity=0.319  Sum_probs=35.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .+++||.++|.|.+.-+|+.++..|.++|++|.+++++.
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            368999999999999999999999999999999998654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.48  E-value=0.03  Score=41.53  Aligned_cols=31  Identities=35%  Similarity=0.593  Sum_probs=26.9

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR   45 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~   45 (259)
                      +++|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            4788886 7999999999999999 58898765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.48  E-value=0.077  Score=46.95  Aligned_cols=115  Identities=15%  Similarity=0.087  Sum_probs=75.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHc-------CC--eEEEEeCChhhHHHHHHHHHhcC----CCeEEEEcCCCCHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKH-------GA--AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRV   79 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~-------G~--~vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~   79 (259)
                      -++.|+|++|.+|.+++-.|+..       |.  ++++++++.+.++...-++.+..    .++.+ ..  .+.+     
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~ye-----  172 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPYE-----  172 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCHH-----
Confidence            48999999999999999999988       65  69999999998888777776432    11211 11  1222     


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHh-cCCCCCCCCCCceEEEecccc
Q 024976           80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK-GGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        80 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~~~~~~g~iv~isS~~  158 (259)
                            .+...|++|..+|... ++  ..+   -.+.++.|.    .+++.+.+.+.+ .+.       .+.||.+|...
T Consensus       173 ------~~kdaDiVVitAG~pr-kp--G~t---R~dLl~~N~----~I~k~i~~~I~~~a~p-------~~ivIVVsNPv  229 (444)
T PLN00112        173 ------VFQDAEWALLIGAKPR-GP--GME---RADLLDING----QIFAEQGKALNEVASR-------NVKVIVVGNPC  229 (444)
T ss_pred             ------HhCcCCEEEECCCCCC-CC--CCC---HHHHHHHHH----HHHHHHHHHHHHhcCC-------CeEEEEcCCcH
Confidence                  2346899999999632 21  223   334455554    456666666666 221       26777777543

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.47  E-value=0.025  Score=40.97  Aligned_cols=76  Identities=12%  Similarity=0.193  Sum_probs=55.6

Q ss_pred             EEEEeCCccchHHHHHHHHHH-cCCeEE-EEeCCh----------------------hhHHHHHHHHHhcCCCeEEEEcC
Q 024976           14 VALLTGGGSGIGFEISLQLGK-HGAAIA-IMGRRK----------------------TVLRSAVAALHSLGIPAIGLEGD   69 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~-~G~~vv-~~~r~~----------------------~~~~~~~~~~~~~~~~v~~~~~D   69 (259)
                      +++|.|++|-+|+.+++.+.+ .|.+++ .++|+.                      +.++...+.     .   -+..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~---DVvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----A---DVVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH---------SEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----C---CEEEE
Confidence            689999999999999999999 688855 567765                      222222222     1   16779


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCC
Q 024976           70 VRKREDAVRVVESTINHFGKLDILVNAAAG   99 (259)
Q Consensus        70 l~~~~~~~~~~~~~~~~~g~id~li~~ag~   99 (259)
                      +|.++.+.+.++.+.+.  ++.+|+-..|+
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999999988877  78899999995

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.47  E-value=0.022  Score=48.24  Aligned_cols=116  Identities=16%  Similarity=0.184  Sum_probs=67.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCe--EEEEeCCh--hhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAA--IAIMGRRK--TVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~--vv~~~r~~--~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +++.|+|++|.+|..++..|+..|..  |++++++.  +.++....++.+.    +.... +.. -+|.+          
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~-i~~-~~d~~----------   68 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE-IKI-SSDLS----------   68 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE-EEE-CCCHH----------
Confidence            36899999999999999999999864  99999954  4444433333321    11111 111 01211          


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                       .+...|++|.++|....   .+.+.   ...++.|+.    +++.+.+.+.+...       .+.++++++..
T Consensus        69 -~l~~aDiViitag~p~~---~~~~r---~dl~~~n~~----i~~~~~~~i~~~~~-------~~~viv~~npv  124 (309)
T cd05294          69 -DVAGSDIVIITAGVPRK---EGMSR---LDLAKKNAK----IVKKYAKQIAEFAP-------DTKILVVTNPV  124 (309)
T ss_pred             -HhCCCCEEEEecCCCCC---CCCCH---HHHHHHHHH----HHHHHHHHHHHHCC-------CeEEEEeCCch
Confidence             12368999999996321   12232   233344443    44455555544321       27788888754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.46  E-value=0.017  Score=56.22  Aligned_cols=77  Identities=14%  Similarity=0.194  Sum_probs=60.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcC-Ce-------------EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHG-AA-------------IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDA   76 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G-~~-------------vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~   76 (259)
                      +.|.++|.|+ |.+|+..++.|++.. +.             |++.+++.+..+++.+..    .++..+.+|++|.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSESL  642 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHHH
Confidence            4679999997 899999999999763 33             778888877766665543    2467899999999988


Q ss_pred             HHHHHHHHHHcCCccEEEECCCC
Q 024976           77 VRVVESTINHFGKLDILVNAAAG   99 (259)
Q Consensus        77 ~~~~~~~~~~~g~id~li~~ag~   99 (259)
                      .++++       .+|+||++...
T Consensus       643 ~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        643 LKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHhhc-------CCCEEEECCCc
Confidence            77765       58999999763

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.45  E-value=0.062  Score=45.39  Aligned_cols=117  Identities=18%  Similarity=0.177  Sum_probs=68.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ++.|+|++|.+|.+++..|+..|.  +++++|.+  .++...-++......+.+..+.-.+  +       ..+.+...|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~~--~-------~y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGPE--E-------LKKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCCC--c-------hHHhcCCCC
Confidence            688999999999999999998884  69999988  3343334444322112222110000  0       122334789


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ++|.+||.... +  ..+   -.+.++.|..    +++-+.+.+.+...       .+.++++|...
T Consensus        71 ivvitaG~~~k-~--g~t---R~dll~~N~~----i~~~i~~~i~~~~p-------~a~vivvtNPv  120 (310)
T cd01337          71 VVVIPAGVPRK-P--GMT---RDDLFNINAG----IVRDLATAVAKACP-------KALILIISNPV  120 (310)
T ss_pred             EEEEeCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHHHhCC-------CeEEEEccCch
Confidence            99999996422 1  222   3455556654    44444555544322       26777777765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.42  E-value=0.018  Score=48.27  Aligned_cols=79  Identities=20%  Similarity=0.251  Sum_probs=52.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+++++|+|+++++|..++..+...|++|+++.++.++.+.. .+   .+.+..   .+..+.+....+.. ... -.++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~---~~~~~~~~~~~~~~-~~~-~~~~  209 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EA---LGADIA---INYREEDFVEVVKA-ETG-GKGV  209 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCcEE---EecCchhHHHHHHH-HcC-CCCe
Confidence            578999999999999999999999999999988877654432 32   232111   22333333333222 111 1259


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |.+++++|
T Consensus       210 d~~i~~~~  217 (325)
T TIGR02824       210 DVILDIVG  217 (325)
T ss_pred             EEEEECCc
Confidence            99999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.42  E-value=0.027  Score=47.61  Aligned_cols=118  Identities=14%  Similarity=0.163  Sum_probs=69.0

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ++.|+|++|.+|..++..|+..|.  +++++|.++  .+...-++........+..+.-.+  +       ..+.+...|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~~--~-------~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGEE--G-------LENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCCC--c-------hHHHcCCCC
Confidence            478999999999999999998875  699999876  222222233221111111100000  0       122335789


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      ++|.++|.... +  ..+   -.+.+..|+.    +++-+.+.+.+...       .+.++++|...-
T Consensus        70 ivvitaG~~~~-~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p-------~~iiivvsNPvD  120 (312)
T TIGR01772        70 VVVIPAGVPRK-P--GMT---RDDLFNVNAG----IVKDLVAAVAESCP-------KAMILVITNPVN  120 (312)
T ss_pred             EEEEeCCCCCC-C--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCC-------CeEEEEecCchh
Confidence            99999996422 1  122   3345556655    56666666665432       366777777653

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.41  E-value=0.028  Score=48.15  Aligned_cols=76  Identities=21%  Similarity=0.257  Sum_probs=50.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ..+++++|+|+ |++|...+..+...|+ +|+++++++++++.+ +++   |....   .|..+. ++.++    .+..+
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~-~~~~~----~~~~g  234 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM---GADKL---VNPQND-DLDHY----KAEKG  234 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc---CCcEE---ecCCcc-cHHHH----hccCC
Confidence            36889999986 8999999988888899 588888887765543 333   43222   233332 23222    22235


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      .+|++|.+.|
T Consensus       235 ~~D~vid~~G  244 (343)
T PRK09880        235 YFDVSFEVSG  244 (343)
T ss_pred             CCCEEEECCC
Confidence            6999999998

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.40  E-value=0.066  Score=45.11  Aligned_cols=114  Identities=17%  Similarity=0.230  Sum_probs=71.2

Q ss_pred             EEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcCCC---eEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           15 ALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~---v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +.|.|+ |.+|..++..|+..|  .+++++|.+.+.++....++.+....   ..+..+  .+.+           .+..
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~-----------~l~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA-----------DAAD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH-----------HhCC
Confidence            357887 579999999999998  57999999988888877777654221   222211  2221           2246


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      -|++|.++|.... +  ..+.   ...+..|    .-+++.+.+.+.+...       .+.++++|....
T Consensus        67 aDiVIitag~p~~-~--~~~R---~~l~~~n----~~i~~~~~~~i~~~~p-------~~~viv~sNP~d  119 (300)
T cd00300          67 ADIVVITAGAPRK-P--GETR---LDLINRN----APILRSVITNLKKYGP-------DAIILVVSNPVD  119 (300)
T ss_pred             CCEEEEcCCCCCC-C--CCCH---HHHHHHH----HHHHHHHHHHHHHhCC-------CeEEEEccChHH
Confidence            8999999996422 1  1232   2333333    4456666666665432       377887776543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.37  E-value=0.014  Score=45.32  Aligned_cols=43  Identities=16%  Similarity=0.297  Sum_probs=35.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH   57 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~   57 (259)
                      ++.|.|+ |-+|+.++..++..|++|.+++++.+.++...+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            4778888 799999999999999999999999988877666654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.35  E-value=0.019  Score=43.69  Aligned_cols=85  Identities=13%  Similarity=0.076  Sum_probs=56.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH-------hcCCCeEEEEcCCCCHHHHHHHHHH--H
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-------SLGIPAIGLEGDVRKREDAVRVVES--T   83 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~-------~~~~~v~~~~~Dl~~~~~~~~~~~~--~   83 (259)
                      +++-+.|- |-+|..++++|+++|++|.+.+|+.++.+++.+.-.       +.-....++..-+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            36777876 699999999999999999999999887777654310       0001234555668888888888877  6


Q ss_pred             HHHcCCccEEEECCC
Q 024976           84 INHFGKLDILVNAAA   98 (259)
Q Consensus        84 ~~~~g~id~li~~ag   98 (259)
                      .....+=+++|.+.-
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            554444455555544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.31  E-value=0.15  Score=43.12  Aligned_cols=113  Identities=13%  Similarity=0.125  Sum_probs=68.2

Q ss_pred             EEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++.|.|+ |.+|..++..|+.+|  .+|++++++.+..+....++....   .......   .+.+           .+.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-----------~l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-----------DCK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-----------HhC
Confidence            5889998 799999999999999  479999999877665444454321   1122121   2221           124


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ..|++|.++|.....   ..+   ..+.+..|    .-+.+.+.+.+.+...       .|.+++++...
T Consensus        67 ~aDiViita~~~~~~---~~~---r~dl~~~n----~~i~~~~~~~l~~~~~-------~giiiv~tNP~  119 (308)
T cd05292          67 GADVVVITAGANQKP---GET---RLDLLKRN----VAIFKEIIPQILKYAP-------DAILLVVTNPV  119 (308)
T ss_pred             CCCEEEEccCCCCCC---CCC---HHHHHHHH----HHHHHHHHHHHHHHCC-------CeEEEEecCcH
Confidence            789999999964221   122   23333444    3455555555554322       37777776543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.30  E-value=0.043  Score=43.40  Aligned_cols=38  Identities=24%  Similarity=0.281  Sum_probs=34.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .+++||.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            3689999999998 6999999999999999999998653

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.28  E-value=0.027  Score=42.66  Aligned_cols=41  Identities=24%  Similarity=0.398  Sum_probs=34.3

Q ss_pred             CCCC-CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976            4 PFKG-DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus         4 ~~~~-~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      .+|. .+++||.++|.||+ .+|...++.|.+.|++|.+++..
T Consensus         4 ~~P~~l~l~~~~vlVvGGG-~va~rka~~Ll~~ga~V~VIsp~   45 (157)
T PRK06719          4 MYPLMFNLHNKVVVIIGGG-KIAYRKASGLKDTGAFVTVVSPE   45 (157)
T ss_pred             ccceEEEcCCCEEEEECCC-HHHHHHHHHHHhCCCEEEEEcCc
Confidence            3444 46999999999976 89999999999999999888543

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.27  E-value=0.023  Score=47.70  Aligned_cols=79  Identities=16%  Similarity=0.215  Sum_probs=51.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+++++|+|+++++|++++..+...|++|+.++++.++.+.+ .+   .+.. .++  |.........+.+ ... ...+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~g~~-~~~--~~~~~~~~~~~~~-~~~-~~~~  214 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LA---LGAA-HVI--VTDEEDLVAEVLR-ITG-GKGV  214 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH---cCCC-EEE--ecCCccHHHHHHH-HhC-CCCc
Confidence            578999999999999999999999999999998887655544 22   2321 222  2222222222222 111 1259


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |.++++.|
T Consensus       215 d~vi~~~~  222 (328)
T cd08268         215 DVVFDPVG  222 (328)
T ss_pred             eEEEECCc
Confidence            99999988

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.26  E-value=0.034  Score=46.94  Aligned_cols=31  Identities=32%  Similarity=0.446  Sum_probs=26.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCe-EEEEeCC
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR   45 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~   45 (259)
                      +++|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            3788886 79999999999999995 8888864

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.26  E-value=0.0024  Score=44.70  Aligned_cols=37  Identities=27%  Similarity=0.377  Sum_probs=31.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      +++||.++|+|| |.+|..-++.|.+.|++|.+++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            589999999998 6999999999999999999998875

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.26  E-value=0.051  Score=43.08  Aligned_cols=73  Identities=19%  Similarity=0.270  Sum_probs=49.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +++||.++|.||+ .+|..-++.|++.|++|.+++.+..  ++ .+++...+ ++.++.-+.... .           +.
T Consensus         6 ~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp~~~--~~-l~~l~~~~-~i~~~~~~~~~~-d-----------l~   68 (205)
T TIGR01470         6 NLEGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAEELE--SE-LTLLAEQG-GITWLARCFDAD-I-----------LE   68 (205)
T ss_pred             EcCCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcCCCC--HH-HHHHHHcC-CEEEEeCCCCHH-H-----------hC
Confidence            5899999999976 7899999999999999999987643  11 12222222 566766665521 1           13


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      ..|.+|.+.+
T Consensus        69 ~~~lVi~at~   78 (205)
T TIGR01470        69 GAFLVIAATD   78 (205)
T ss_pred             CcEEEEECCC
Confidence            4667776666

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=96.25  E-value=0.12  Score=43.47  Aligned_cols=122  Identities=11%  Similarity=0.147  Sum_probs=69.1

Q ss_pred             hHHHHHHHHHHcCCeEEEEeCChhhHH-HHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 024976           24 IGFEISLQLGKHGAAIAIMGRRKTVLR-SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL  102 (259)
Q Consensus        24 iG~~~a~~l~~~G~~vv~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  102 (259)
                      =|+.+|++|++.|+.|++.+|+.+..+ ...+.+.+.|..+    ++     +..++++       .-|++|.+-.    
T Consensus        31 gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~----Aa-----S~aEAAa-------~ADVVIL~LP----   90 (341)
T TIGR01724        31 GGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKV----VS-----DDKEAAK-------HGEIHVLFTP----   90 (341)
T ss_pred             CHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCee----cC-----CHHHHHh-------CCCEEEEecC----
Confidence            378999999999999999999876553 3334444444211    11     2223332       5789988876    


Q ss_pred             CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHHHHHHHHHHH
Q 024976          103 VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS  182 (259)
Q Consensus       103 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~  182 (259)
                            +.+..+..+           +-+++.+..           |.+|.-.|....                ..+.+.
T Consensus        91 ------d~aaV~eVl-----------~GLaa~L~~-----------GaIVID~STIsP----------------~t~~~~  126 (341)
T TIGR01724        91 ------FGKGTFSIA-----------RTIIEHVPE-----------NAVICNTCTVSP----------------VVLYYS  126 (341)
T ss_pred             ------CHHHHHHHH-----------HHHHhcCCC-----------CCEEEECCCCCH----------------HHHHHH
Confidence                  222222221           223333322           445544443211                233344


Q ss_pred             HHHHhc-CCCCeEEEEEecccccCCccc
Q 024976          183 LALEWG-TDYAIRVNGIAPGPIKDTAGV  209 (259)
Q Consensus       183 la~e~~-~~~gi~v~~i~pg~v~t~~~~  209 (259)
                      |-.+++ .++.+-|.+.+|+.|..+..+
T Consensus       127 ~e~~l~~~r~d~~v~s~HP~~vP~~~~~  154 (341)
T TIGR01724       127 LEKILRLKRTDVGISSMHPAAVPGTPQH  154 (341)
T ss_pred             HHHHhhcCccccCeeccCCCCCCCCCCC
Confidence            444443 367799999999999755444

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK05442 malate dehydrogenase; Provisional

Probab=96.24  E-value=0.13  Score=43.90  Aligned_cols=117  Identities=12%  Similarity=0.161  Sum_probs=70.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC-------eEEEEeCChh--hHHHHHHHHHhcC----CCeEEEEcCCCCHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKT--VLRSAVAALHSLG----IPAIGLEGDVRKREDAVR   78 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~-------~vv~~~r~~~--~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~   78 (259)
                      .+++.|+|++|.+|..++..|+..|.       +++++|.++.  .++....++....    .++.+ ..  .       
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~-------   73 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--D-------   73 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--C-------
Confidence            46899999999999999999998764       6999998543  3444444443321    11111 11  1       


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                          ..+.+..-|++|-+||.... +  ..+   -.+.+..|+    .+++.+.+.+.+...      +.+.++++|...
T Consensus        74 ----~y~~~~daDiVVitaG~~~k-~--g~t---R~dll~~Na----~i~~~i~~~i~~~~~------~~~iiivvsNPv  133 (326)
T PRK05442         74 ----PNVAFKDADVALLVGARPRG-P--GME---RKDLLEANG----AIFTAQGKALNEVAA------RDVKVLVVGNPA  133 (326)
T ss_pred             ----hHHHhCCCCEEEEeCCCCCC-C--CCc---HHHHHHHHH----HHHHHHHHHHHHhCC------CCeEEEEeCCch
Confidence                12334578999999996321 1  223   334444553    466777777766321      026777777543

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.23  E-value=0.048  Score=44.87  Aligned_cols=88  Identities=27%  Similarity=0.353  Sum_probs=58.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHH-HcCCeEEEEe--CChh----hH-----HHHHHHH-HhcCCCeEEEEcCCCCHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLG-KHGAAIAIMG--RRKT----VL-----RSAVAAL-HSLGIPAIGLEGDVRKREDAV   77 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~-~~G~~vv~~~--r~~~----~~-----~~~~~~~-~~~~~~v~~~~~Dl~~~~~~~   77 (259)
                      -.|++||.|+|+|.|++.--..+ --|++.+.+.  |...    ..     ....++. ++.|--.+.+..|.-+.+-=+
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            45899999999999987543322 1456655442  2110    00     1112222 233444567888988888888


Q ss_pred             HHHHHHHHHcCCccEEEECCC
Q 024976           78 RVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        78 ~~~~~~~~~~g~id~li~~ag   98 (259)
                      ..++.|++.||.+|.+|+.-+
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlA  140 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLA  140 (398)
T ss_pred             HHHHHHHHhhccccEEEEecc
Confidence            999999999999999998754

>PRK14851 hypothetical protein; Provisional

Probab=96.22  E-value=0.045  Score=51.16  Aligned_cols=80  Identities=11%  Similarity=0.184  Sum_probs=53.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh-------------------hhHHHHHHHHHhcC--CCeEEE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLG--IPAIGL   66 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~-------------------~~~~~~~~~~~~~~--~~v~~~   66 (259)
                      .|++.+|+|.| .||+|..++..|+..|. ++.++|.+.                   .+.+..++.+.+.+  .++..+
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            47789999998 55999999999999999 488887631                   23344455555443  345666


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 024976           67 EGDVRKREDAVRVVESTINHFGKLDILVNAA   97 (259)
Q Consensus        67 ~~Dl~~~~~~~~~~~~~~~~~g~id~li~~a   97 (259)
                      ...++ .+.+.++++       .+|+||.+.
T Consensus       119 ~~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        119 PAGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             ecCCC-hHHHHHHHh-------CCCEEEECC
Confidence            66665 444444443       467766554

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.22  E-value=0.052  Score=47.06  Aligned_cols=79  Identities=16%  Similarity=0.184  Sum_probs=52.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~~~   87 (259)
                      -.|.+++|+|+ ++||...+..+...|+ +|+.++++.++++.+ +++   +...   ..|..+ .+.+.+.+.++..  
T Consensus       184 ~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~---~i~~~~~~~~~~~~v~~~~~--  253 (368)
T TIGR02818       184 EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATD---CVNPNDYDKPIQEVIVEITD--  253 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCe---EEcccccchhHHHHHHHHhC--
Confidence            35789999975 8999999988888899 698888887765544 333   3322   123332 2233333333322  


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      +.+|++|.+.|
T Consensus       254 ~g~d~vid~~G  264 (368)
T TIGR02818       254 GGVDYSFECIG  264 (368)
T ss_pred             CCCCEEEECCC
Confidence            36999999998

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.19  E-value=0.18  Score=40.50  Aligned_cols=76  Identities=21%  Similarity=0.223  Sum_probs=54.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +.|+++|=+|+++|   .+++.+++.|++|..+|-.++..+.....-.+.+..+.+          ....++++.+..++
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y----------~~~~~edl~~~~~~  124 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDY----------RQATVEDLASAGGQ  124 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccc----------hhhhHHHHHhcCCC
Confidence            78999999999999   689999999999999999888877766554443332112          12233344444478


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|+|++.-=
T Consensus       125 FDvV~cmEV  133 (243)
T COG2227         125 FDVVTCMEV  133 (243)
T ss_pred             ccEEEEhhH
Confidence            999998754

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.19  E-value=0.016  Score=48.09  Aligned_cols=38  Identities=29%  Similarity=0.380  Sum_probs=35.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      +++||+++|+|.+.-+|+.++..|.++|++|.++.++.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            68999999999999999999999999999999887653

>PLN02740 Alcohol dehydrogenase-like

Probab=96.19  E-value=0.043  Score=47.81  Aligned_cols=79  Identities=14%  Similarity=0.212  Sum_probs=52.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCH-HHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~~~~~~   87 (259)
                      -.|++++|.|+ |++|..++..+...|+ +|+.++++.++++.+. +   .+.+. ++  |..+. +...+.+.++..  
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~---~Ga~~-~i--~~~~~~~~~~~~v~~~~~--  266 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-E---MGITD-FI--NPKDSDKPVHERIREMTG--  266 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-H---cCCcE-EE--ecccccchHHHHHHHHhC--
Confidence            35789999985 8999999998889999 5988988877655542 2   23322 22  33332 123333333322  


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      +.+|++|.+.|
T Consensus       267 ~g~dvvid~~G  277 (381)
T PLN02740        267 GGVDYSFECAG  277 (381)
T ss_pred             CCCCEEEECCC
Confidence            26999999999

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.18  E-value=0.053  Score=46.56  Aligned_cols=42  Identities=21%  Similarity=0.315  Sum_probs=36.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      -.|++++|.|+ |++|..++..+...|++|++++++.++++.+
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            35789999999 9999999999989999999999888766544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.15  E-value=0.03  Score=49.89  Aligned_cols=78  Identities=18%  Similarity=0.235  Sum_probs=59.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ...+.++|.|+ |.+|+.+++.|.+.|.+|++++++++..+...++    +..+.++.+|.++.+.++++-      ...
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~------~~~  297 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG------IDE  297 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC------Ccc
Confidence            45688999998 8999999999999999999999998766554443    234667889999887765541      135


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      .|.+|....
T Consensus       298 a~~vi~~~~  306 (453)
T PRK09496        298 ADAFIALTN  306 (453)
T ss_pred             CCEEEECCC
Confidence            777776554

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=96.14  E-value=0.12  Score=40.01  Aligned_cols=79  Identities=24%  Similarity=0.222  Sum_probs=62.1

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+++||+++=-|++.|+   ++-..+-.|+ .|+.++.+.+.++-..+...+...++.++.+|+++..           
T Consensus        41 ~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~-----------  106 (198)
T COG2263          41 RGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR-----------  106 (198)
T ss_pred             cCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC-----------
Confidence            467999999999988774   2333344586 5999999999888888887777778999999998543           


Q ss_pred             HcCCccEEEECCCCCC
Q 024976           86 HFGKLDILVNAAAGNF  101 (259)
Q Consensus        86 ~~g~id~li~~ag~~~  101 (259)
                        +++|.+|.|+-+..
T Consensus       107 --~~~dtvimNPPFG~  120 (198)
T COG2263         107 --GKFDTVIMNPPFGS  120 (198)
T ss_pred             --CccceEEECCCCcc
Confidence              48999999997543

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.14  E-value=0.013  Score=44.45  Aligned_cols=42  Identities=24%  Similarity=0.345  Sum_probs=33.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL   49 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~   49 (259)
                      .+++||+++|.|.+.-+|+.++..|.++|+.|.++..+.+.+
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l   73 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNL   73 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcc
Confidence            368999999999999999999999999999999987665443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.13  E-value=0.064  Score=46.47  Aligned_cols=79  Identities=14%  Similarity=0.178  Sum_probs=53.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCH-HHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~~~~~~   87 (259)
                      -.|.+++|.|+ +++|...+..+...|+ +|+.++++.++++.+ +++   +.+..   .|..+. +++.+.+.++..  
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~~~~~~~v~~~~~--  254 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATDC---VNPKDHDKPIQQVLVEMTD--  254 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCEE---EcccccchHHHHHHHHHhC--
Confidence            35789999975 8999999999999999 588898887766543 333   33222   233332 234444444332  


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      +++|+++.+.|
T Consensus       255 ~g~d~vid~~g  265 (368)
T cd08300         255 GGVDYTFECIG  265 (368)
T ss_pred             CCCcEEEECCC
Confidence            37999999988

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.12  E-value=0.04  Score=46.96  Aligned_cols=85  Identities=19%  Similarity=0.237  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+++++|.|+++++|.++++.+...|++|+.+.++.+..++..+.+.+.+....+..-+.+ ..+..+.+.....  +.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~--~~~  222 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR-SLLATELLKSAPG--GRP  222 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc-cccHHHHHHHHcC--CCc
Confidence            5789999999999999999999999999887776653222222333333433222211110 0022222222211  269


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |.++.+.|
T Consensus       223 d~vld~~g  230 (341)
T cd08290         223 KLALNCVG  230 (341)
T ss_pred             eEEEECcC
Confidence            99999888

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=96.11  E-value=0.034  Score=45.80  Aligned_cols=84  Identities=20%  Similarity=0.279  Sum_probs=65.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +|-+++--||+|++|+++.......|.+-+-+-|+.+..+++.+.++..|+...+-+-.+.+.+-     ......++++
T Consensus       160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~-----~k~~~~~~~p  234 (354)
T KOG0025|consen  160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKM-----KKFKGDNPRP  234 (354)
T ss_pred             CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhh-----hhhhccCCCc
Confidence            46788889999999999998888899999989899999999999999888765554444444332     2223356789


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      -.-+||.|.
T Consensus       235 rLalNcVGG  243 (354)
T KOG0025|consen  235 RLALNCVGG  243 (354)
T ss_pred             eEEEeccCc
Confidence            999999995

>PRK07411 hypothetical protein; Validated

Probab=96.06  E-value=0.065  Score=46.89  Aligned_cols=36  Identities=33%  Similarity=0.464  Sum_probs=31.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~   45 (259)
                      .|++.+|+|.|++ |+|..+++.|+..|.. +.++|.+
T Consensus        35 ~L~~~~VlivG~G-GlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         35 RLKAASVLCIGTG-GLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             HHhcCcEEEECCC-HHHHHHHHHHHHcCCCEEEEECCC
Confidence            4677899999875 9999999999999994 8888763

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.04  E-value=0.032  Score=44.93  Aligned_cols=37  Identities=19%  Similarity=0.335  Sum_probs=33.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCe---EEEEeCC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAA---IAIMGRR   45 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~---vv~~~r~   45 (259)
                      .++++++++|.|+ |+.|++++.+|.+.|.+   +.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            3588999999998 79999999999999985   9999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PLN02928 oxidoreductase family protein

Probab=96.03  E-value=0.028  Score=48.39  Aligned_cols=38  Identities=29%  Similarity=0.431  Sum_probs=34.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ..+.||++.|.|- |.||+++++.|...|++|+.++|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            4689999999987 6999999999999999999998864

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.00  E-value=0.05  Score=47.94  Aligned_cols=85  Identities=12%  Similarity=0.031  Sum_probs=51.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC---eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~---~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      .|.+++|.|++|++|...+..+...|+   +|++++++.++++...+.+...    +....+  .|..+.++..+.+.++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~--i~~~~~~~~~~~v~~~  252 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY--VNPATIDDLHATLMEL  252 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE--ECCCccccHHHHHHHH
Confidence            467999999999999998887766654   6999999888766554422110    211122  2333222233333322


Q ss_pred             HHHcCCccEEEECCC
Q 024976           84 INHFGKLDILVNAAA   98 (259)
Q Consensus        84 ~~~~g~id~li~~ag   98 (259)
                      .. -..+|.+|.+.|
T Consensus       253 t~-g~g~D~vid~~g  266 (410)
T cd08238         253 TG-GQGFDDVFVFVP  266 (410)
T ss_pred             hC-CCCCCEEEEcCC
Confidence            21 125899998877

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.00  E-value=0.018  Score=48.09  Aligned_cols=39  Identities=23%  Similarity=0.319  Sum_probs=36.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      +++||.+.|.|.++-+|+.++..|.++|++|.++.++..
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            689999999999999999999999999999999977654

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.98  E-value=0.043  Score=46.80  Aligned_cols=78  Identities=15%  Similarity=0.155  Sum_probs=51.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ..|.+++|+|+ |++|..++..+...|++ |++++++.++.+.+ +++   +... +  .|..+.+ .+++.+ ... ..
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~-~--i~~~~~~-~~~~~~-~~~-~~  230 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADF-V--INSGQDD-VQEIRE-LTS-GA  230 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE-E--EcCCcch-HHHHHH-HhC-CC
Confidence            35889999986 89999999999899998 99888887765443 333   3221 1  2333333 333222 111 12


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      ++|++|.+.|
T Consensus       231 ~~d~vid~~g  240 (339)
T cd08239         231 GADVAIECSG  240 (339)
T ss_pred             CCCEEEECCC
Confidence            6999999988

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.96  E-value=0.04  Score=37.03  Aligned_cols=36  Identities=28%  Similarity=0.491  Sum_probs=31.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGR   44 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r   44 (259)
                      .++.+|+++|.|. |+.|+.++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4578999999999 99999999999999 456888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.93  E-value=0.051  Score=45.90  Aligned_cols=76  Identities=14%  Similarity=0.078  Sum_probs=49.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++++|.|+++++|.+++......|++|+.+.++.++.+.+ +++   +... +  .|..+. . .+.+....  -+.+|
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-v--~~~~~~-~-~~~~~~~~--~~~~d  215 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKL---GAKE-V--IPREEL-Q-EESIKPLE--KQRWA  215 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHc---CCCE-E--EcchhH-H-HHHHHhhc--cCCcC
Confidence            67999999999999999999999999999888887765444 332   3221 1  222222 1 12222221  13589


Q ss_pred             EEEECCC
Q 024976           92 ILVNAAA   98 (259)
Q Consensus        92 ~li~~ag   98 (259)
                      .++.+.|
T Consensus       216 ~vld~~g  222 (326)
T cd08289         216 GAVDPVG  222 (326)
T ss_pred             EEEECCc
Confidence            9998877

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.91  E-value=0.11  Score=43.58  Aligned_cols=76  Identities=18%  Similarity=0.253  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCC-CHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~~~~~g~   89 (259)
                      .|+++.|+|+.| +|.--++.-.+.|.+|+.+++...+.+++.+.+   |++..+   |.+ |++.++++.+..   .+.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~fv---~~~~d~d~~~~~~~~~---dg~  250 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADVFV---DSTEDPDIMKAIMKTT---DGG  250 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---CcceeE---EecCCHHHHHHHHHhh---cCc
Confidence            799999999997 997666666667999999999876666666655   443333   456 677777666532   134


Q ss_pred             ccEEEEC
Q 024976           90 LDILVNA   96 (259)
Q Consensus        90 id~li~~   96 (259)
                      +|.+++-
T Consensus       251 ~~~v~~~  257 (360)
T KOG0023|consen  251 IDTVSNL  257 (360)
T ss_pred             ceeeeec
Confidence            5555544

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.90  E-value=0.055  Score=45.61  Aligned_cols=77  Identities=18%  Similarity=0.246  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--G   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~--g   88 (259)
                      .+.+++|+|+++++|..++..+...|++|+.++++.++.+.+ ++   .+... +  .|..+.+..+.+    .+..  .
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-~--~~~~~~~~~~~~----~~~~~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RA---LGADV-A--VDYTRPDWPDQV----REALGGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCCE-E--EecCCccHHHHH----HHHcCCC
Confidence            478999999999999999999999999999998887765443 33   23221 2  233333322322    2222  2


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      ++|+++++.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5999999987

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.89  E-value=0.14  Score=43.03  Aligned_cols=116  Identities=15%  Similarity=0.231  Sum_probs=70.6

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCC---CeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++.|+|+ |+||.+++..|+.++.  +++++|.+++.++....++.....   .-..+..| .+.+.           +
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~-----------~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED-----------L   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh-----------h
Confidence            46899999 9999999999988865  699999997776666666654321   01122222 22222           2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ..-|+++-.||.....   .++.   .+.++.|..    ..+.+.+.+.+...       .+.++.++...
T Consensus        68 ~~aDiVvitAG~prKp---GmtR---~DLl~~Na~----I~~~i~~~i~~~~~-------d~ivlVvtNPv  121 (313)
T COG0039          68 KGADIVVITAGVPRKP---GMTR---LDLLEKNAK----IVKDIAKAIAKYAP-------DAIVLVVTNPV  121 (313)
T ss_pred             cCCCEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhCC-------CeEEEEecCcH
Confidence            3689999999964321   1333   344555543    44555555554432       25666666544

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.89  E-value=0.043  Score=46.27  Aligned_cols=79  Identities=14%  Similarity=0.216  Sum_probs=51.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|.+++|.|+++++|.+++......|++++.+.++.++.+.+.+ +   +.+ .++  +-.+.. ..+.+.+.... .++
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~-~~~--~~~~~~-~~~~i~~~~~~-~~~  209 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIG-PVV--STEQPG-WQDKVREAAGG-API  209 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCC-EEE--cCCCch-HHHHHHHHhCC-CCC
Confidence            57899999999999999999999999999888777665444432 2   322 222  222222 22222222111 259


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |+++.+.|
T Consensus       210 d~v~d~~g  217 (324)
T cd08292         210 SVALDSVG  217 (324)
T ss_pred             cEEEECCC
Confidence            99999888

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.87  E-value=0.029  Score=43.42  Aligned_cols=45  Identities=24%  Similarity=0.316  Sum_probs=37.2

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR   50 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~   50 (259)
                      .....+.|+++.|.|. |.||+++++.|...|++|+.++|......
T Consensus        29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            3446799999999976 69999999999999999999999876543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK14852 hypothetical protein; Provisional

Probab=95.85  E-value=0.069  Score=51.43  Aligned_cols=80  Identities=16%  Similarity=0.164  Sum_probs=53.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCC-------------------hhhHHHHHHHHHhcCCC--eEEE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR-------------------KTVLRSAVAALHSLGIP--AIGL   66 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~-------------------~~~~~~~~~~~~~~~~~--v~~~   66 (259)
                      .|++.+|+|.| .||+|..+++.|+..|.. +.++|.+                   ..+.+..++.+.+.++.  +..+
T Consensus       329 kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            47788999998 559999999999999984 8888763                   13444455566555543  4455


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 024976           67 EGDVRKREDAVRVVESTINHFGKLDILVNAA   97 (259)
Q Consensus        67 ~~Dl~~~~~~~~~~~~~~~~~g~id~li~~a   97 (259)
                      ...++ .+.+.++++       .+|+||.+.
T Consensus       408 ~~~I~-~en~~~fl~-------~~DiVVDa~  430 (989)
T PRK14852        408 PEGVA-AETIDAFLK-------DVDLLVDGI  430 (989)
T ss_pred             ecCCC-HHHHHHHhh-------CCCEEEECC
Confidence            55553 445555443       467776644

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=95.85  E-value=0.42  Score=36.80  Aligned_cols=77  Identities=18%  Similarity=0.188  Sum_probs=57.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ..++++++=.|++.|.   ++..+++.|.+|+.++.+++..+...+.+...+.++.++.+|+.+..            .+
T Consensus        17 ~~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------~~   81 (179)
T TIGR00537        17 ELKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV------------RG   81 (179)
T ss_pred             hcCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc------------CC
Confidence            3566788888888774   45567777778999999998888887777665667888888876421            14


Q ss_pred             CccEEEECCCCC
Q 024976           89 KLDILVNAAAGN  100 (259)
Q Consensus        89 ~id~li~~ag~~  100 (259)
                      .+|.++.|..+.
T Consensus        82 ~fD~Vi~n~p~~   93 (179)
T TIGR00537        82 KFDVILFNPPYL   93 (179)
T ss_pred             cccEEEECCCCC
Confidence            799999998764

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.84  E-value=0.063  Score=44.90  Aligned_cols=42  Identities=21%  Similarity=0.326  Sum_probs=36.3

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      .+++++|+|+++++|..++..+...|++|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999998877654443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.83  E-value=0.076  Score=45.91  Aligned_cols=74  Identities=18%  Similarity=0.268  Sum_probs=48.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|++++|.|+ +++|..++..+...|++|++++.+.++.....+++   +.+.. +  |..+.+.+.+       ..+.+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~v-i--~~~~~~~~~~-------~~~~~  248 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADSF-L--VSTDPEKMKA-------AIGTM  248 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcEE-E--cCCCHHHHHh-------hcCCC
Confidence            5789999765 89999999988889999888877665544433333   33221 1  3333322222       22468


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |++|.+.|
T Consensus       249 D~vid~~g  256 (360)
T PLN02586        249 DYIIDTVS  256 (360)
T ss_pred             CEEEECCC
Confidence            99999888

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.82  E-value=0.081  Score=43.83  Aligned_cols=82  Identities=13%  Similarity=0.196  Sum_probs=52.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .-+|+|++|.||+|..|+-+-..-.-.|+.|+...-+.++..-+..++   +-+.   ..|-.++.++.+++++   .++
T Consensus       151 pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~---G~d~---afNYK~e~~~~~aL~r---~~P  221 (343)
T KOG1196|consen  151 PKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLSAALKR---CFP  221 (343)
T ss_pred             CCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhcc---CCcc---ceeccCccCHHHHHHH---hCC
Confidence            356799999999999998655544456999998766655544444333   2111   2233344445554443   343


Q ss_pred             -CccEEEECCCC
Q 024976           89 -KLDILVNAAAG   99 (259)
Q Consensus        89 -~id~li~~ag~   99 (259)
                       .||+.+-|.|.
T Consensus       222 ~GIDiYfeNVGG  233 (343)
T KOG1196|consen  222 EGIDIYFENVGG  233 (343)
T ss_pred             CcceEEEeccCc
Confidence             79999999995

>PRK14967 putative methyltransferase; Provisional

Probab=95.81  E-value=0.46  Score=38.08  Aligned_cols=76  Identities=24%  Similarity=0.305  Sum_probs=52.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .+.+++-.|+++|.   ++..+++.|+ +|+.++.+...++...+.+...+.++.++..|+.+.      +.     .+.
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~-----~~~  101 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE-----FRP  101 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc-----CCC
Confidence            35688889887654   3445566676 799999998877776666655455677777776531      11     147


Q ss_pred             ccEEEECCCCC
Q 024976           90 LDILVNAAAGN  100 (259)
Q Consensus        90 id~li~~ag~~  100 (259)
                      +|.++.|+.+.
T Consensus       102 fD~Vi~npPy~  112 (223)
T PRK14967        102 FDVVVSNPPYV  112 (223)
T ss_pred             eeEEEECCCCC
Confidence            99999998764

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.81  E-value=0.061  Score=47.82  Aligned_cols=41  Identities=20%  Similarity=0.311  Sum_probs=35.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL   49 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~   49 (259)
                      ..+.||+++|.|.+ .||+.+++.|...|++|+++++++...
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            46899999999977 599999999999999999998875543

>PRK07877 hypothetical protein; Provisional

Probab=95.80  E-value=0.066  Score=50.34  Aligned_cols=79  Identities=16%  Similarity=0.208  Sum_probs=55.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCCh------------------hhHHHHHHHHHhcCC--CeEEE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRK------------------TVLRSAVAALHSLGI--PAIGL   66 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~------------------~~~~~~~~~~~~~~~--~v~~~   66 (259)
                      .|++++|+|.|+ | +|..++..|+..|.  ++.++|.+.                  .+.+.+++.+...++  ++..+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            477899999999 4 99999999999994  699998741                  334445555555444  45566


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 024976           67 EGDVRKREDAVRVVESTINHFGKLDILVNAA   97 (259)
Q Consensus        67 ~~Dl~~~~~~~~~~~~~~~~~g~id~li~~a   97 (259)
                      ...++ .+.+.++++       .+|+||.+.
T Consensus       182 ~~~i~-~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        182 TDGLT-EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             eccCC-HHHHHHHhc-------CCCEEEECC
Confidence            66666 556665553       577777775

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.80  E-value=0.029  Score=41.83  Aligned_cols=40  Identities=25%  Similarity=0.382  Sum_probs=33.1

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL   56 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~   56 (259)
                      |+.+|+++-+|+++|..|+++|.+|+..  +.+.-+.++.++
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~   40 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA   40 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence            5789999999999999999999999988  445555665555

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.80  E-value=0.28  Score=42.76  Aligned_cols=117  Identities=14%  Similarity=0.114  Sum_probs=71.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC-e----EEE--E--eCChhhHHHHHHHHHhcC-C---CeEEEEcCCCCHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA-A----IAI--M--GRRKTVLRSAVAALHSLG-I---PAIGLEGDVRKREDAVR   78 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~-~----vv~--~--~r~~~~~~~~~~~~~~~~-~---~v~~~~~Dl~~~~~~~~   78 (259)
                      .-++.|+|++|.+|.+++-.|+..|. +    +++  +  +++.+.++...-++.+.. +   ++. +..  .+.     
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~y-----  115 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DPY-----  115 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CCH-----
Confidence            34899999999999999999998874 3    444  4  888888877777765432 1   111 111  122     


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                            +.+...|++|..||... ++  ..+   -.+.++.|+    .+++.+.+.+.+...+      .+.|+++|...
T Consensus       116 ------~~~kdaDIVVitAG~pr-kp--g~t---R~dll~~N~----~I~k~i~~~I~~~a~~------~~iviVVsNPv  173 (387)
T TIGR01757       116 ------EVFEDADWALLIGAKPR-GP--GME---RADLLDING----QIFADQGKALNAVASK------NCKVLVVGNPC  173 (387)
T ss_pred             ------HHhCCCCEEEECCCCCC-CC--CCC---HHHHHHHHH----HHHHHHHHHHHHhCCC------CeEEEEcCCcH
Confidence                  22346899999999642 21  223   234445554    4566666666663211      26677777543

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.78  E-value=0.13  Score=43.20  Aligned_cols=83  Identities=20%  Similarity=0.299  Sum_probs=59.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .|.++||-||+ .||......+-..|+. |++++-.+.+++.+++ +   |.++......-.+.+.+.+.+++..... .
T Consensus       169 ~Gs~vLV~GAG-PIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~---Ga~~~~~~~~~~~~~~~~~~v~~~~g~~-~  242 (354)
T KOG0024|consen  169 KGSKVLVLGAG-PIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F---GATVTDPSSHKSSPQELAELVEKALGKK-Q  242 (354)
T ss_pred             cCCeEEEECCc-HHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h---CCeEEeeccccccHHHHHHHHHhhcccc-C
Confidence            56799999875 8999999888889995 9999998888777665 4   4444444333334555555555444322 4


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|+.|.|.|.
T Consensus       243 ~d~~~dCsG~  252 (354)
T KOG0024|consen  243 PDVTFDCSGA  252 (354)
T ss_pred             CCeEEEccCc
Confidence            9999999994

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.77  E-value=0.095  Score=45.91  Aligned_cols=35  Identities=31%  Similarity=0.493  Sum_probs=30.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR   45 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~   45 (259)
                      |++.+|+|.|++ |+|..++..|+..|. ++.++|.+
T Consensus        40 L~~~~VlviG~G-GlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         40 LKNARVLVIGAG-GLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             HhcCCEEEECCC-HHHHHHHHHHHHcCCCeEEEECCC
Confidence            577899999875 999999999999998 48888864

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.76  E-value=0.11  Score=45.08  Aligned_cols=79  Identities=15%  Similarity=0.250  Sum_probs=52.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCH-HHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~~~~~~   87 (259)
                      -.|.+++|.|+ +++|...+..+...|+ +|+.++++.++.+.+ ++   .+... ++  |..+. +++.+.+.++..  
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~---~Ga~~-~i--~~~~~~~~~~~~v~~~~~--  255 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KK---FGVTE-FV--NPKDHDKPVQEVIAEMTG--  255 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCce-EE--cccccchhHHHHHHHHhC--
Confidence            35789999985 8999999988888999 699998887765543 33   34321 12  33321 234444443332  


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      +.+|+++.+.|
T Consensus       256 ~~~d~vid~~G  266 (369)
T cd08301         256 GGVDYSFECTG  266 (369)
T ss_pred             CCCCEEEECCC
Confidence            36999999988

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.74  E-value=0.18  Score=43.07  Aligned_cols=64  Identities=16%  Similarity=0.123  Sum_probs=45.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHH---HHHh--cCCCeEEEEcCCCC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA---ALHS--LGIPAIGLEGDVRK   72 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~---~~~~--~~~~v~~~~~Dl~~   72 (259)
                      ..+.|+++.|.|. |.||+++|+.|...|++|+..+++.+......+   .+.+  ...++.++.+-.+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH
Confidence            4689999999986 579999999999999999999988653222110   1111  13456666666664

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.71  E-value=0.089  Score=44.54  Aligned_cols=79  Identities=15%  Similarity=0.166  Sum_probs=51.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.+.+++|.|+++++|.+++......|++|+.+.++.++.+.+ ++   .+.+ .++  +..+ .+..+.+.....  +.
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~-~v~--~~~~-~~~~~~~~~~~~--~~  207 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KS---LGCD-RPI--NYKT-EDLGEVLKKEYP--KG  207 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HH---cCCc-eEE--eCCC-ccHHHHHHHhcC--CC
Confidence            3578999999999999999988888999998888876655443 22   2322 122  2222 222223322221  36


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|.++++.|
T Consensus       208 vd~v~~~~g  216 (329)
T cd08250         208 VDVVYESVG  216 (329)
T ss_pred             CeEEEECCc
Confidence            999999877

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.71  E-value=0.078  Score=45.99  Aligned_cols=77  Identities=19%  Similarity=0.253  Sum_probs=49.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .|++++|.|+ +++|..++..+...|+ +|+.+++++++++.+ +++   +.+ .+  .|..+.+..++ +.+...  ++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~-~~--i~~~~~~~~~~-i~~~~~--~g  259 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GAT-AT--VNAGDPNAVEQ-VRELTG--GG  259 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCc-eE--eCCCchhHHHH-HHHHhC--CC
Confidence            5789999985 8999999888888899 588888887765543 333   332 12  23333322222 222211  36


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|.+.|
T Consensus       260 ~d~vid~~G  268 (371)
T cd08281         260 VDYAFEMAG  268 (371)
T ss_pred             CCEEEECCC
Confidence            999999988

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.71  E-value=0.038  Score=45.84  Aligned_cols=38  Identities=18%  Similarity=0.336  Sum_probs=34.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      +++||.++|.|.+.-+|+.++..|.++|+.|.++....
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t  191 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT  191 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc
Confidence            68999999999999999999999999999998875443

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.70  E-value=0.088  Score=47.34  Aligned_cols=76  Identities=12%  Similarity=0.158  Sum_probs=50.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+.+|+++|.| .||.|+++++.|.+.|+.|.+.|++.....+.   +...+  +.+...+- +.+.+           
T Consensus        11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~---l~~~g--i~~~~~~~-~~~~~-----------   72 (473)
T PRK00141         11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKL---IEVTG--VADISTAE-ASDQL-----------   72 (473)
T ss_pred             ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHH---HHhcC--cEEEeCCC-chhHh-----------
Confidence            457788999998 66899999999999999999999765433221   22222  33332211 11111           


Q ss_pred             CCccEEEECCCCCC
Q 024976           88 GKLDILVNAAAGNF  101 (259)
Q Consensus        88 g~id~li~~ag~~~  101 (259)
                      ...|.||..+|+..
T Consensus        73 ~~~d~vV~Spgi~~   86 (473)
T PRK00141         73 DSFSLVVTSPGWRP   86 (473)
T ss_pred             cCCCEEEeCCCCCC
Confidence            25799999999754

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.69  E-value=0.11  Score=43.65  Aligned_cols=76  Identities=18%  Similarity=0.272  Sum_probs=50.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|.+++|.|+++++|.++++.....|++|+.+.++.++.+.+ .+   .+.+.. +. +  +. +..+.+.+.   -.++
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~-~~-~--~~-~~~~~i~~~---~~~~  209 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KE---LGADEV-VI-D--DG-AIAEQLRAA---PGGF  209 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hh---cCCcEE-Ee-c--Cc-cHHHHHHHh---CCCc
Confidence            578999999999999999999999999998888876654333 22   333222 21 1  11 222222222   2369


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |.++.+.|
T Consensus       210 d~vl~~~~  217 (320)
T cd08243         210 DKVLELVG  217 (320)
T ss_pred             eEEEECCC
Confidence            99999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.69  E-value=0.2  Score=43.89  Aligned_cols=81  Identities=19%  Similarity=0.224  Sum_probs=48.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEE-EeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      -.+++++| .|+++||..++..+...|+++++ .+++.++++.+ +++   +..    ..+..+..+..+.+.++.. ..
T Consensus       184 ~~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~---Ga~----~v~~~~~~~~~~~v~~~~~-~~  253 (393)
T TIGR02819       184 GPGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSF---GCE----TVDLSKDATLPEQIEQILG-EP  253 (393)
T ss_pred             CCCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHc---CCe----EEecCCcccHHHHHHHHcC-CC
Confidence            35789999 45689999999888889998554 45655444333 223   432    1233322222222322221 12


Q ss_pred             CccEEEECCCCC
Q 024976           89 KLDILVNAAAGN  100 (259)
Q Consensus        89 ~id~li~~ag~~  100 (259)
                      .+|++|.+.|..
T Consensus       254 g~Dvvid~~G~~  265 (393)
T TIGR02819       254 EVDCAVDCVGFE  265 (393)
T ss_pred             CCcEEEECCCCc
Confidence            599999999953

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.68  E-value=0.097  Score=44.36  Aligned_cols=79  Identities=18%  Similarity=0.171  Sum_probs=47.8

Q ss_pred             CCcEEEE-eCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALL-TGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lI-tGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .+..++| +||++++|..++......|++|+.+.++.++.+.+.+    .+.+. ++  |..+.+..++ +.+... -.+
T Consensus       142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~-~i--~~~~~~~~~~-v~~~~~-~~~  212 (324)
T cd08291         142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----IGAEY-VL--NSSDPDFLED-LKELIA-KLN  212 (324)
T ss_pred             CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcE-EE--ECCCccHHHH-HHHHhC-CCC
Confidence            4444555 5999999999988877889999988888766544432    33322 22  2222222222 221111 125


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|+++.+.|
T Consensus       213 ~d~vid~~g  221 (324)
T cd08291         213 ATIFFDAVG  221 (324)
T ss_pred             CcEEEECCC
Confidence            999999888

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.67  E-value=0.083  Score=45.97  Aligned_cols=74  Identities=18%  Similarity=0.280  Sum_probs=48.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|++++|.|+ +++|..++......|++|++++++.++..+..++   .+.+..   .|..+.+.+.       +..+.+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~---lGa~~~---i~~~~~~~v~-------~~~~~~  243 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR---LGADSF---LVTTDSQKMK-------EAVGTM  243 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh---CCCcEE---EcCcCHHHHH-------HhhCCC
Confidence            5789999886 8999999998888999998888775543333333   343222   1333322222       222469


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |+++.+.|
T Consensus       244 D~vid~~G  251 (375)
T PLN02178        244 DFIIDTVS  251 (375)
T ss_pred             cEEEECCC
Confidence            99999988

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.67  E-value=0.17  Score=39.87  Aligned_cols=71  Identities=25%  Similarity=0.252  Sum_probs=47.3

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-HHHHHHHHHh-----------cCCCeEEEEcCCCCHHHHHHHHHH
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHS-----------LGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-~~~~~~~~~~-----------~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      .+..||+|-||.+++++|++.|++|++..|+.++ .+...+.+..           ...++.++.+-   ++.+..+.++
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHH
Confidence            4556778899999999999999999998666554 4444444421           12345555444   4556666667


Q ss_pred             HHHHcC
Q 024976           83 TINHFG   88 (259)
Q Consensus        83 ~~~~~g   88 (259)
                      +.+.++
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            776664

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.66  E-value=0.032  Score=46.25  Aligned_cols=44  Identities=18%  Similarity=0.258  Sum_probs=37.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAAL   56 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~   56 (259)
                      +++++|.|+ ||-+++++..|.+.|+. |.+++|+.++.+.+.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            568999986 79999999999999985 999999988877766654

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.63  E-value=0.13  Score=41.55  Aligned_cols=30  Identities=33%  Similarity=0.531  Sum_probs=25.8

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCe-EEEEeCC
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR   45 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~   45 (259)
                      ++|.| .||+|.++++.|+..|.. +.++|.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            67777 569999999999999994 8888875

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.62  E-value=0.057  Score=41.32  Aligned_cols=42  Identities=19%  Similarity=0.213  Sum_probs=32.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS   51 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~   51 (259)
                      .+...+++|+| +|-.|...++.|...|++|+..+.+....+.
T Consensus        17 ~~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~   58 (168)
T PF01262_consen   17 GVPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQ   58 (168)
T ss_dssp             EE-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHH
T ss_pred             CCCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHh
Confidence            35678999998 5689999999999999999999988765544

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A

Probab=95.61  E-value=0.13  Score=35.41  Aligned_cols=68  Identities=16%  Similarity=0.178  Sum_probs=47.8

Q ss_pred             CccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 024976           20 GGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA   97 (259)
Q Consensus        20 a~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~a   97 (259)
                      |+|...+.+++.+ +.|  .+++.+|.+++.++...+.....+.++.+++.|+.+..          ...+++|+++.+.
T Consensus         7 G~G~~~~~l~~~~-~~~~~~~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l~----------~~~~~~D~v~~~~   75 (101)
T PF13649_consen    7 GTGRVTRALARRF-DAGPSSRVIGVDISPEMLELAKKRFSEDGPKVRFVQADARDLP----------FSDGKFDLVVCSG   75 (101)
T ss_dssp             TTSHHHHHHHHHS------SEEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTCHH----------HHSSSEEEEEE-T
T ss_pred             CCcHHHHHHHHHh-hhcccceEEEEECCHHHHHHHHHhchhcCCceEEEECCHhHCc----------ccCCCeeEEEEcC
Confidence            3445555566565 667  68999999999998888887766678999999998853          1235899999965


Q ss_pred             C
Q 024976           98 A   98 (259)
Q Consensus        98 g   98 (259)
                      .
T Consensus        76 ~   76 (101)
T PF13649_consen   76 L   76 (101)
T ss_dssp             T
T ss_pred             C
Confidence            5

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.60  E-value=0.12  Score=45.18  Aligned_cols=74  Identities=18%  Similarity=0.241  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ..|+++|+|++ ..|+.+++.+.+.|++|++++.++......   +.     -.++.+|..|.+.+.+++++     ..+
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~a-----d~~~~~~~~d~~~l~~~~~~-----~~i   76 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VA-----HRSHVIDMLDGDALRAVIER-----EKP   76 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hh-----hheEECCCCCHHHHHHHHHH-----hCC
Confidence            45699999876 689999999999999999998876432211   11     02466788888877777653     268


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |.++....
T Consensus        77 d~vi~~~e   84 (395)
T PRK09288         77 DYIVPEIE   84 (395)
T ss_pred             CEEEEeeC
Confidence            88886543

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.57  E-value=0.083  Score=44.47  Aligned_cols=80  Identities=18%  Similarity=0.126  Sum_probs=51.7

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ..+.+++|.|+++++|.+++..+...|++++++.++.++.+.+ +++   +.+.   ..+..+....+++ .+... ..+
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~-~~~~~-~~~  207 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---GADE---VIDSSPEDLAQRV-KEATG-GAG  207 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---CCCE---EecccchhHHHHH-HHHhc-CCC
Confidence            3578999999999999999999999999998888877654443 322   3211   1222222222222 21111 126


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|.++.+.|
T Consensus       208 ~d~vl~~~g  216 (323)
T cd05282         208 ARLALDAVG  216 (323)
T ss_pred             ceEEEECCC
Confidence            999999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.56  E-value=0.17  Score=42.10  Aligned_cols=80  Identities=16%  Similarity=0.184  Sum_probs=51.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ..+++++|.|+++++|.++++.+...|++|+.+.++.++.+.+ .+   .+.+ .++.  ..+......+ ..... -.+
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~-~~~~--~~~~~~~~~~-~~~~~-~~~  205 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RA---AGAD-HVIN--YRDEDFVERV-REITG-GRG  205 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH---CCCC-EEEe--CCchhHHHHH-HHHcC-CCC
Confidence            3578999999999999999999999999999888777655443 22   2322 1222  2222222222 11111 125


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|.++++.+
T Consensus       206 ~d~vl~~~~  214 (320)
T cd05286         206 VDVVYDGVG  214 (320)
T ss_pred             eeEEEECCC
Confidence            999999877

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK08328 hypothetical protein; Provisional

Probab=95.54  E-value=0.06  Score=43.54  Aligned_cols=38  Identities=24%  Similarity=0.427  Sum_probs=32.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChh
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKT   47 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~   47 (259)
                      .+++++++|.|++ |+|.++++.|+..|.. +.++|.+.-
T Consensus        24 ~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~v   62 (231)
T PRK08328         24 KLKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQTP   62 (231)
T ss_pred             HHhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCcc
Confidence            4678899999875 9999999999999984 889987643

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=95.53  E-value=0.11  Score=44.06  Aligned_cols=42  Identities=24%  Similarity=0.413  Sum_probs=36.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      .+.+++|.|+++.+|..+++.+...|++|+.++++.++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999888887765554

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.53  E-value=0.1  Score=45.76  Aligned_cols=42  Identities=14%  Similarity=0.113  Sum_probs=34.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS   51 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~   51 (259)
                      -.+.+++|.|+++++|..++..+...|++++++.++.++.+.
T Consensus       188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~  229 (398)
T TIGR01751       188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEY  229 (398)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            357899999999999999999888999998888776655433

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.53  E-value=0.16  Score=42.87  Aligned_cols=90  Identities=14%  Similarity=0.168  Sum_probs=57.0

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHH------HHHh--cCCCeEEEEcCCCCHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA------ALHS--LGIPAIGLEGDVRKREDAVR   78 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~------~~~~--~~~~v~~~~~Dl~~~~~~~~   78 (259)
                      ...|+||++.|.|- |.||+++|+.|...|.+|++.+|.....+...+      .+.+  ...++..+.+-  +.++ ..
T Consensus        11 ~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLP--d~~t-~~   86 (335)
T PRK13403         11 VELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLP--DEQQ-AH   86 (335)
T ss_pred             hhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCC--ChHH-HH
Confidence            35689999999986 689999999999999999888765332221111      1111  12345555444  4444 45


Q ss_pred             HH-HHHHHHcCCccEEEECCCCC
Q 024976           79 VV-ESTINHFGKLDILVNAAAGN  100 (259)
Q Consensus        79 ~~-~~~~~~~g~id~li~~ag~~  100 (259)
                      ++ +++...+.+=.+|+...|++
T Consensus        87 V~~~eil~~MK~GaiL~f~hgfn  109 (335)
T PRK13403         87 VYKAEVEENLREGQMLLFSHGFN  109 (335)
T ss_pred             HHHHHHHhcCCCCCEEEECCCcc
Confidence            55 34555544445788888854

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.52  E-value=0.063  Score=45.61  Aligned_cols=41  Identities=17%  Similarity=0.059  Sum_probs=34.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA   54 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~   54 (259)
                      +++.|.|+ |-+|..++..|+..|++|++.+++++..+...+
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~   48 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRA   48 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            46888876 689999999999999999999999876655444

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.52  E-value=0.72  Score=41.82  Aligned_cols=109  Identities=21%  Similarity=0.205  Sum_probs=62.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++|.|.+ +.|+++++.|.++|++|.+.|.+...  +..+.+...+..+.+...+.. ++.    +       .
T Consensus         4 ~~~~~~i~v~G~G-~sG~s~a~~L~~~G~~v~~~D~~~~~--~~~~~L~~~~~~~~~~~g~~~-~~~----~-------~   68 (498)
T PRK02006          4 DLQGPMVLVLGLG-ESGLAMARWCARHGARLRVADTREAP--PNLAALRAELPDAEFVGGPFD-PAL----L-------D   68 (498)
T ss_pred             ccCCCEEEEEeec-HhHHHHHHHHHHCCCEEEEEcCCCCc--hhHHHHHhhcCCcEEEeCCCc-hhH----h-------c
Confidence            3678899999954 79999999999999999999876432  112224333323344332222 111    1       2


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHH--HHhccchhHHHHHHHHHHHH
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRT--VIEIDSVGTFIMCHEALKYL  135 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~--~~~~n~~~~~~l~~~~~~~~  135 (259)
                      ..|.||..+|+....  .+.. ..+..  ...+.+.+-..++..++..+
T Consensus        69 ~~d~vv~sp~I~~~~--~~~~-~~~~~a~~~~i~v~~~~e~~~~~~~~l  114 (498)
T PRK02006         69 GVDLVALSPGLSPLE--AALA-PLVAAARERGIPVWGEIELFAQALAAL  114 (498)
T ss_pred             CCCEEEECCCCCCcc--cccC-HHHHHHHHCCCcEEEHHHHHHHHHhhh
Confidence            479999999974321  0011 12222  23456676666655554433

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.52  E-value=0.11  Score=43.90  Aligned_cols=78  Identities=18%  Similarity=0.230  Sum_probs=50.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--G   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~--g   88 (259)
                      .+.+++|.|+++++|+.+++.+...|++++++.++.++.+.+ ..   .+.+. ++  +..+.+.   ..+++.+..  .
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-~~--~~~~~~~---~~~~~~~~~~~~  209 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KK---LAAII-LI--RYPDEEG---FAPKVKKLTGEK  209 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCcE-EE--ecCChhH---HHHHHHHHhCCC
Confidence            578999999999999999999999999988888776655444 22   23321 22  2222221   222222222  2


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      .+|.++++.|
T Consensus       210 ~~d~~i~~~~  219 (334)
T PTZ00354        210 GVNLVLDCVG  219 (334)
T ss_pred             CceEEEECCc
Confidence            5999999876

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.52  E-value=0.033  Score=49.49  Aligned_cols=39  Identities=21%  Similarity=0.318  Sum_probs=34.2

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      ++.|+||.|.+|.++++.|.+.|++|++++|+.+.....
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            689999999999999999999999999999987654443

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.51  E-value=0.091  Score=45.23  Aligned_cols=74  Identities=24%  Similarity=0.378  Sum_probs=48.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC---hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..|++++|+|+ |++|...+..+...|++|++++|+   .++.+ ..+   +.+..  .  +|..+. ++.+ .    ..
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~---~~Ga~--~--v~~~~~-~~~~-~----~~  235 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVE---ELGAT--Y--VNSSKT-PVAE-V----KL  235 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHH---HcCCE--E--ecCCcc-chhh-h----hh
Confidence            36889999986 899999998888889999999884   33332 222   33432  2  233332 2222 1    11


Q ss_pred             cCCccEEEECCC
Q 024976           87 FGKLDILVNAAA   98 (259)
Q Consensus        87 ~g~id~li~~ag   98 (259)
                      .+.+|++|.+.|
T Consensus       236 ~~~~d~vid~~g  247 (355)
T cd08230         236 VGEFDLIIEATG  247 (355)
T ss_pred             cCCCCEEEECcC
Confidence            257999999998

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.50  E-value=0.13  Score=42.80  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=47.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ..+++++|.|+ +++|..++..+...|++ |++++++.++++. .+++   +....   .|..+.   .+.+.+... -.
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~-a~~~---Ga~~~---i~~~~~---~~~~~~~~~-~~  186 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL-ALSF---GATAL---AEPEVL---AERQGGLQN-GR  186 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc---CCcEe---cCchhh---HHHHHHHhC-CC
Confidence            36889999986 79999999988888997 7778777665433 2322   33211   122221   122222211 12


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      .+|++|.+.|
T Consensus       187 g~d~vid~~G  196 (280)
T TIGR03366       187 GVDVALEFSG  196 (280)
T ss_pred             CCCEEEECCC
Confidence            5999999988

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.49  E-value=0.038  Score=46.25  Aligned_cols=37  Identities=24%  Similarity=0.260  Sum_probs=34.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe-CC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~-r~   45 (259)
                      +++||+++|.|.++-+|+.++..|.++|+.|.++. |.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT  192 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT  192 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence            68999999999999999999999999999999985 44

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.49  E-value=0.051  Score=49.96  Aligned_cols=73  Identities=15%  Similarity=0.117  Sum_probs=54.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ..++|.|. |.+|+++++.|.++|.+|++++.|+++.+...+    .  ....+.+|.+|++.++++=      ..+.|.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~--g~~~i~GD~~~~~~L~~a~------i~~a~~  484 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R--GIRAVLGNAANEEIMQLAH------LDCARW  484 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C--CCeEEEcCCCCHHHHHhcC------ccccCE
Confidence            45666665 589999999999999999999999877655543    1  4778999999988876641      125676


Q ss_pred             EEECCC
Q 024976           93 LVNAAA   98 (259)
Q Consensus        93 li~~ag   98 (259)
                      ++-+.+
T Consensus       485 viv~~~  490 (558)
T PRK10669        485 LLLTIP  490 (558)
T ss_pred             EEEEcC
Confidence            666554

>PLN03139 formate dehydrogenase; Provisional

Probab=95.48  E-value=0.11  Score=45.27  Aligned_cols=39  Identities=23%  Similarity=0.200  Sum_probs=34.6

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ..++.||++.|.| .|.||+.+++.|...|++|+..++..
T Consensus       194 ~~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        194 AYDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             CcCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence            3579999999999 56899999999999999999988764

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=95.45  E-value=0.063  Score=43.26  Aligned_cols=36  Identities=19%  Similarity=0.211  Sum_probs=31.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEE-EEeC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIA-IMGR   44 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv-~~~r   44 (259)
                      .++++++++|.| .|.+|+.+++.|.+.|++|+ +.++
T Consensus        27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            468899999997 68999999999999999988 5555

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.43  E-value=0.59  Score=39.39  Aligned_cols=110  Identities=15%  Similarity=0.203  Sum_probs=69.0

Q ss_pred             EeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC----CCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           17 LTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        17 ItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      |.|+ |.+|..++..|+..+.  +++++|.+.+.++....++....    .++.+. .  .+.+           .+..-
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~~~-----------~~~da   65 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GDYS-----------DCKDA   65 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CCHH-----------HHCCC
Confidence            3554 8999999999998875  59999999888777777776532    222222 1  2322           23468


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      |++|..||.... +  .++.   ...++.|.    .+++.+.+.+.+...       .+.++++|...
T Consensus        66 DivVitag~~rk-~--g~~R---~dll~~N~----~i~~~~~~~i~~~~p-------~~~vivvsNP~  116 (299)
T TIGR01771        66 DLVVITAGAPQK-P--GETR---LELVGRNV----RIMKSIVPEVVKSGF-------DGIFLVATNPV  116 (299)
T ss_pred             CEEEECCCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHHHhCC-------CeEEEEeCCHH
Confidence            999999996422 1  2333   23444443    455555666555432       37788777654

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	259
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		4e-33
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		7e-29
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		6e-24
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		5e-23
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		5e-20
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		8e-20
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		8e-20
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		9e-20
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		9e-20
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		9e-20
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		2e-19
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		1e-17
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		8e-17
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-16
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-16
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-16
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		3e-15
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		4e-15
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		4e-15
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		5e-15
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-14
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		6e-14
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		7e-14
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		9e-14
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		2e-13
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		3e-12
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		3e-12
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		4e-12
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		4e-12
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		5e-12
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		7e-12
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		8e-12
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		1e-11
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-11
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-11
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-11
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		2e-11
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		6e-11
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		6e-11
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		6e-11
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		7e-11
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		7e-11
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		8e-11
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		8e-11
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		9e-11
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		9e-11
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-10
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		1e-10
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-10
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		2e-10
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		2e-10
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-10
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		3e-10
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-10
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-10
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		7e-10
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		8e-10
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		9e-10
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		9e-10
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-09
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		1e-09
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		2e-09
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-09
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-09
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		2e-09
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-09
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-09
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		5e-09
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		5e-09
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		5e-09
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		7e-09
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		8e-09
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		8e-09
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		1e-08
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		1e-08
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		1e-08
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		1e-08
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-08
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		3e-08
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		3e-08
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		5e-08
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		6e-08
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		6e-08
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		6e-08
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		6e-08
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		6e-08
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		7e-08
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		8e-08
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		9e-08
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		1e-07
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-07
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		1e-07
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		1e-07
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		1e-07
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		1e-07
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		1e-07
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-07
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-07
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		2e-07
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-07
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-07
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-07
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		3e-07
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-07
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		4e-07
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		4e-07
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		5e-07
2pd3_A	275	Crystal Structure Of The Helicobacter Pylori Enoyl-		5e-07
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		6e-07
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		7e-07
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		9e-07
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		1e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		1e-06
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-06
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		1e-06
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		1e-06
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		2e-06
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		2e-06
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-06
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-06
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-06
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-06
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		3e-06
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		4e-06
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-06
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		4e-06
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		4e-06
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		4e-06
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-06
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		6e-06
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		6e-06
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-06
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		8e-06
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		8e-06
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		8e-06
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		9e-06
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		9e-06
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		1e-05
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		1e-05
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		1e-05
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		1e-05
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-05
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-05
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		1e-05
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		2e-05
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		2e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-05
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		2e-05
3f4b_A	323	Crystal Structure Of Plasmodium Berghei Enoyl-Acyl-		2e-05
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		3e-05
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-05
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		4e-05
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		6e-05
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		7e-05
2o2s_A	315	The Structure Of T. Gondii Enoyl Acyl Carrier Prote		1e-04
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-04
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		1e-04
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		1e-04
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		1e-04
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		1e-04
2o50_A	315	The Crystal Structure Of Toxoplasma Gondii Enoyl Ac		1e-04
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		2e-04
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		2e-04
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		2e-04
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		2e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		2e-04
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-04
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-04
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-04
2o2y_A	349	The Crystal Structure Of P. Falciparum Enoyl Acyl C		2e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-04
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-04
2foi_A	269	Synthesis, Biological Activity, And X-Ray Crystal S		2e-04
3am3_A	329	A372m Mutant Of Enoyl-Acp Reductase From Plasmodium		2e-04
1uh5_A	329	Crystal Structure Of Enoyl-Acp Reductase With Tricl		2e-04
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-04
1vrw_A	336	Crystal Structure Analysis Of Plasmodium Falciparum		2e-04
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		2e-04
2ol4_A	338	Crystal Structure Of Plasmodium Falciparum Enoyl Ac		2e-04
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		2e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		2e-04
1nhg_A	229	Crystal Structure Analysis Of Plasmodium Falciparum		2e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		3e-04
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		3e-04
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-04
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		4e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-04
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		4e-04
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		4e-04
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		5e-04
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		5e-04
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		5e-04
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		5e-04
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		6e-04
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		7e-04
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		7e-04
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		7e-04
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		8e-04
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		9e-04

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
           F  D+L+ KVA +TGGGSGIGF I+    +HG    I  R    VL +A     + G   
Sbjct: 20  FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 79
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
           + L  DVR     +  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ G
Sbjct: 80  LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 139
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
           TF         + +                  ATL       Q+H  +AKAAVD++TR L
Sbjct: 140 TF--------NVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 191
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDI 236
           A+EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +I
Sbjct: 192 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEI 244

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 115/213 (53%), Gaps = 9/213 (4%)
Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
           K KV ++TGG SG G   + +  K GA + I GR K  L  A   +       + ++ DV
Sbjct: 5   KEKVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDV 64
Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
           R  +D  + +E     FG++DIL+N AAGNF+ PAEDLS NG+ +VI I   GTF  C +
Sbjct: 65  RNTDDIQKXIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTF-YCSQ 123
Query: 131 AL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           A+ KY                     AT  + A    IH +AAKA V + T++LA+EWG 
Sbjct: 124 AIGKYW-------IEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGR 176
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 222
            Y IRVN IAPGPI+ T G  KL   E  +K T
Sbjct: 177 KYGIRVNAIAPGPIERTGGADKLWISEEXAKRT 209

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 17/207 (8%)
Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA----- 63
           +L+G+VA++TGG +GIG  I  +L + G+ + I  R+   L+SA   L +   P      
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
           I ++ ++R  E+   +V+ST++ FGK++ LVN   G FL PAE +S  G+  V+E +  G
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 134
Query: 124 TFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRS 182
           TF MC      ++K+                  A          +H  AA+A V ++T+S
Sbjct: 135 TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLA----------VHSGAARAGVYNLTKS 184
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGV 209
           LALEW     IR+N +APG I     V
Sbjct: 185 LALEWACS-GIRINCVAPGVIYSQTAV 210

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 9/193 (4%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
           L+G+VAL+TGG  G+GF I+  L + G ++ +  R       A   L    G+  +    
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV   E+  +++E+    FGKLD +VNAA  N   PAE+   + FR VIE++  GT+ +C
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 138
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA   L++                   T+   + +     +A+K  V S+T++LA EWG
Sbjct: 139 REAFSLLRE--SDNPSIINIGSLTVEEVTMPNISAY-----AASKGGVASLTKALAKEWG 191
Query: 189 TDYAIRVNGIAPG 201
             Y IRVN IAPG
Sbjct: 192 R-YGIRVNVIAPG 203

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 11/229 (4%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
           L+GKV ++TG  +G+G  ++++     A + +  R K     S +  +  +G  AI ++G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV    D + +V+S I  FGKLD+++N A     V + ++S + +  VI+ +  G F+  
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
            EA+KY  +                  +++H    W   +H +A+K  +  +T++LALE+
Sbjct: 125 REAIKYFVE--------NDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEY 176
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
                IRVN I PG I       K A  E R+     +     GE  +I
Sbjct: 177 APK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEI 224

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 11/229 (4%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
           L+GKV ++TG  +G+G  ++++     A + +  R K     S +  +  +G  AI ++G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV    D + +V+S I  FGKLD+++N A     V + ++S + +  VI+ +  G F+  
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
            EA+KY  +                  +++H    W   +H +A+K  +  +T +LALE+
Sbjct: 125 REAIKYFVE--------NDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
                IRVN I PG I       K A  E R+     +     GE  +I
Sbjct: 177 APK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEI 224

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
           LK KV ++TGG +G+G  ++++ G+  A + I      +  L  A   +   G  AI ++
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEAL-DAKKEVEEAGGQAIIVQ 71
Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           GDV K ED V +V++ I  FG LD+++N A     VP+ +LS + +  VI+ +  G F+ 
Sbjct: 72  GDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLG 131
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDSITRSLALE 186
             EA+KY  +                  +++H    W   +H +A+K  +  +T +LALE
Sbjct: 132 SREAIKYFVE--------NDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALE 183
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLA 213
           +     IRVN I PG +       K A
Sbjct: 184 YAPK-GIRVNNIGPGAMNTPINAEKFA 209

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
           LK KV ++TGG +G+G  ++++ G+  A + I      +  L  A   +   G  AI ++
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEAL-DAKKEVEEAGGQAIIVQ 71
Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           GDV K ED V +V++ I  FG LD+++N A     VP+ +LS + +  VI+ +  G F+ 
Sbjct: 72  GDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLG 131
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDSITRSLALE 186
             EA+KY  +                  +++H    W   +H +A+K  +  +T +LALE
Sbjct: 132 SREAIKYFVE--------NDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALE 183
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLA 213
           +     IRVN I PG +       K A
Sbjct: 184 YAPK-GIRVNNIGPGAMNTPINAEKFA 209

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
           LK KV ++TGG +G+G  ++++ G+  A + I      +  L  A   +   G  AI ++
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEAL-DAKKEVEEAGGQAIIVQ 71
Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           GDV K ED V +V++ I  FG LD+++N A     VP+ +LS + +  VI+ +  G F+ 
Sbjct: 72  GDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLG 131
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDSITRSLALE 186
             EA+KY  +                  +++H    W   +H +A+K  +  +T +LALE
Sbjct: 132 SREAIKYFVE--------NDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALE 183
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLA 213
           +     IRVN I PG +       K A
Sbjct: 184 YAPK-GIRVNNIGPGAMNTPINAEKFA 209

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 11/229 (4%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
           L+GKV ++TG  +G+G  ++++     A + +  R K     S +  +  +G  AI ++G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV    D + +V+S I  FGKLD+++N A     V + ++S + +  VI+ +  G F+  
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
            EA+KY  +                  +++H    W   +H +A+K  +  +T +LALE+
Sbjct: 125 REAIKYFVE--------NDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
                IRVN I PG I       K A  E R+     +     GE  +I
Sbjct: 177 APK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEI 224

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 11/229 (4%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
           L+GKV ++TG  +G+G  ++++     A + +  R K     S +  +  +G  AI ++G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV    D + +V+S I  FGKLD+++N A     V + ++S + +  VI+ +  G F+  
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
            EA+KY  +                  +++H    W   +H +A+K  +  +T +LALE+
Sbjct: 125 REAIKYFVE--------NDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
                IRVN I PG I       K A  E R+     +     GE  +I
Sbjct: 177 APK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEI 224

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
            +GKVA +TGGG+G+G  ++  L   GA   I  R+  VL++    + S  G     ++ 
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DVR  +     V   I   G  +I++N AAGNF+ P E LSPN ++T+ +I   GT  + 
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 143
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLALEW 187
            E  K L K                   T++  T + + +  ++AKA V+++++SLA EW
Sbjct: 144 LEIGKQLIK--------AQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEW 195
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAP 214
           G  Y +R N I PGPIK     S+L P
Sbjct: 196 G-KYGMRFNVIQPGPIKTKGAFSRLDP 221

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 11/207 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
            +GKVA +TGGG+G+G   +  L   GA   I  R+  VL++    + S  G     ++ 
Sbjct: 24  FQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNKVHAIQC 83
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DVR  +     V   I   G  +I++N AAGNF+ P E LSPN ++T+ +I   GT  + 
Sbjct: 84  DVRDPDXVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 143
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLALEW 187
            E  K L K                   T++  T + + +  ++AKA V++ ++SLA EW
Sbjct: 144 LEIGKQLIK--------AQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEW 195
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAP 214
           G  Y  R N I PGPIK     S+L P
Sbjct: 196 G-KYGXRFNVIQPGPIKTKGAFSRLDP 221

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGL 66
           +LKGKVAL+TG   GIG  I++ L K GA + +   G  +      V  +  LG  AI +
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKA-NEVVDEIKKLGSDAIAV 59
Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVG 123
             DV   ED   +V+ T++ FG++DILVN A     N L+    +    + TVI  +  G
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMR---MKEEEWDTVINTNLKG 116
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
            F+      +++ +                  + +  T    Q +  AAKA V  +T++ 
Sbjct: 117 VFLCTKAVSRFMMR--------QRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTS 168
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           A E  +   I VN IAPG I     ++ +  E I+++    + A +FGE  DI
Sbjct: 169 AKELAS-RNITVNAIAPGFI--ATDMTDVLDENIKAEMLKLIPAAQFGEAQDI 218

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
           L+GKVAL+TG G GIG E++++LG+ G  + +     T      VAA+   G  A  ++ 
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +V   ED VR+ E  +  FGKLDI+ + +        +D++P  F  V  I++ G F + 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA K+L+                    T    A       S +K A+++  R +A++  
Sbjct: 147 REAYKHLE---------IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM- 196
Query: 189 TDYAIRVNGIAPGPIK 204
            D  I VN +APG IK
Sbjct: 197 ADKKITVNVVAPGGIK 212

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
           L+GKVAL+TG G GIG E++++LG+ G  + +     T      VAA+   G  A  ++ 
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +V   ED VR+ E  +  FGKLDI+ + +        +D++P  F  V  I++ G F + 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA K+L+                    T    A       S +K A+++  R +A++  
Sbjct: 147 REAYKHLE---------IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM- 196
Query: 189 TDYAIRVNGIAPGPIK 204
            D  I VN +APG IK
Sbjct: 197 ADKKITVNVVAPGGIK 212

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEG 68
           L GKVAL+TG G GIG  +++ LG+ GA + +     T      V+ + +LG  AI ++ 
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+R+  + V++ +  + HFG LDI V+ +        +D++   F  V  +++ G F + 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA ++L +                   +  ++   + ++ S +K AVDS  R  + + G
Sbjct: 136 REAYRHLTE--------GGRIVLTSSNTSKDFSVPKHSLY-SGSKGAVDSFVRIFSKDCG 186
Query: 189 TDYAIRVNGIAPG 201
            D  I VN +APG
Sbjct: 187 -DKKITVNAVAPG 198

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+G  AL+TGG  GIG+ I  +L   GA++    R +  L   +    S G        D
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF--- 125
           +  R +   ++ +  NHF GKL+ILVN A       A+D +   +  ++ I+    +   
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 125
Query: 126 IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
           ++ H  LK  ++                        A  Y+    A K A+D +TR LA 
Sbjct: 126 VLAHPFLKASERGNVVFISSVSGAL-----------AVPYEAVYGATKGAMDQLTRCLAF 174
Query: 186 EWGTDYAIRVNGIAPGPIKDT-AGVSKLAPE--EIRSKATDYMAAYKFGE 232
           EW  D  IRVNG+ PG I  +   ++   PE  E  +K  D  A  + GE
Sbjct: 175 EWAKD-NIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGE 223

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+G  AL+TGG  GIG+ I  +L   GA++    R +  L   +    S G        D
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66
Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF--- 125
           +  R +   ++ +  NHF GKL+ILVN A       A+D +   +  ++ I+    +   
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 126
Query: 126 IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
           ++ H  LK  ++                        A  Y+    A K A+D +TR LA 
Sbjct: 127 VLAHPFLKASERGNVVFISSVSGAL-----------AVPYEAVYGATKGAMDQLTRCLAF 175
Query: 186 EWGTDYAIRVNGIAPGPIKDT-AGVSKLAPE--EIRSKATDYMAAYKFGE 232
           EW  D  IRVNG+ PG I  +   ++   PE  E  +K  D  A  + GE
Sbjct: 176 EWAKD-NIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGE 224

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEG 68
           L GKVAL+TG G GIG  +++ LG+ GA + +     T      V+ + +LG  AI ++ 
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+R+  + V++ +  + HFG LDI V+ +        +D++   F  V  +++ G F + 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA ++L +                   +  ++   + +  S +K AVDS  R  + + G
Sbjct: 136 REAYRHLTE--------GGRIVLTSSNTSKDFSVPKHSL-FSGSKGAVDSFVRIFSKDCG 186
Query: 189 TDYAIRVNGIAPG 201
            D  I VN +APG
Sbjct: 187 -DKKITVNAVAPG 198

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
           VAL+TG GSGIG   +L L   G  +  +GR +T +      +   G  AI LE DV   
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 74  EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
                 V   +  FG LDI+V NA       P +DL P  +   I ++  GTF+  H  +
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
            YLK+                   T  +T      + +   A V +I + LALE G  + 
Sbjct: 150 PYLKQ-----RGGGAIVVVSSINGTRTFTTPGATAYTATKAAQV-AIVQQLALELGKHH- 202
Query: 193 IRVNGIAPGPIK-DTAGVSKLAPEE 216
           IRVN + PG I+ + +  +KL  EE
Sbjct: 203 IRVNAVCPGAIETNISDNTKLRHEE 227

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 1   MESP-FKG-DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALH 57
            E P +KG + LKGK  L+TGG SGIG  +S+   K GA IAI     +         + 
Sbjct: 34  FEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE 93
Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTV 116
             G+  + L GD+   +    +V+ T+   G L+ILVN  A  +     E ++       
Sbjct: 94  KEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKT 153
Query: 117 IEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAV 176
             I+    F +   AL +LK+                  + + Y      I  SA K A+
Sbjct: 154 FRINIFSYFHVTKAALSHLKQ----------GDVIINTASIVAYEGNETLIDYSATKGAI 203
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI 203
            + TRSL+        IRVNG+APGPI
Sbjct: 204 VAFTRSLSQSL-VQKGIRVNGVAPGPI 229

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 1   MESP-FKG-DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALH 57
            E P +KG + LKGK  L+TGG SGIG  +S+   K GA IAI     +         + 
Sbjct: 34  FEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE 93
Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTV 116
             G+  + L GD+   +    +V+ T+   G L+ILVN  A  +     E ++       
Sbjct: 94  KEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKT 153
Query: 117 IEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAV 176
             I+    F +   AL +LK+                  + + Y      I  SA K A+
Sbjct: 154 FRINIFSYFHVTKAALSHLKQ----------GDVIINTASIVAYEGNETLIDYSATKGAI 203
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI 203
            + TRSL+        IRVNG+APGPI
Sbjct: 204 VAFTRSLSQSL-VQKGIRVNGVAPGPI 229

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 11/227 (4%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGK+AL+TG   GIGF I+    K GA I      + ++   +AA  + GI A G   D
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD 91
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +    +V    +  G +DILVN A     VP  +++   FR VI+ID    FI+  
Sbjct: 92  VTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSK 151
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +  + K                   T+   A        AAK  +  +T+++A E+G 
Sbjct: 152 AVIPSMIKKGHGKIINICSMMSELGRETVSAYA--------AAKGGLKMLTKNIASEYG- 202
Query: 190 DYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
           +  I+ NGI PG I    TA + +L  +  R     ++ A     +W
Sbjct: 203 EANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARW 249

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             GKV L+TG G  IG   +L+L + G AIA++   +  L  A A++   G+ A     D
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           V   E  +  V+S +  FGK+D L N A   G F  P +D   + F  V+ I+  G F  
Sbjct: 65  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF-APVQDYPSDDFARVLTINVTGAF-- 121
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
               LK + +                           Y      +K A+ ++T + AL+ 
Sbjct: 122 --HVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAY----GTSKGAIIALTETAALDL 175
Query: 188 GTDYAIRVNGIAPG 201
              Y IRVN I+PG
Sbjct: 176 AP-YNIRVNAISPG 188

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 13/137 (9%)
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTVIEIDSVGTFI 126
           DV + +D   +V  TI  FG+LD +VN A G+   P   E+ S  GFR ++E++ +GT+ 
Sbjct: 62  DVTQEDDVKTLVSETIRRFGRLDCVVNNA-GHHPPPQRPEETSAQGFRQLLELNLLGTYT 120
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +   AL YL+K                    + Y AT         K AV ++T++LAL+
Sbjct: 121 LTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVAT---------KGAVTAMTKALALD 171
Query: 187 WGTDYAIRVNGIAPGPI 203
             + Y +RVN I+PG I
Sbjct: 172 E-SPYGVRVNCISPGNI 187

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K+A++TGG +GIG  I+ +    GA IAI          A AA+ +LG   + ++ D
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCD 62
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V +  D     +  I+ FG+ DILVN A    L+P ++L+   ++   EI+    F+M  
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 122
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI----HVSAAKAAVDSITRSLAL 185
             +  +K+                    L  T  W +I    H  + KAA    TR+LA 
Sbjct: 123 AFVPGMKRNGWGRII------------NLTSTTYWLKIEAYTHYISTKAANIGFTRALAS 170
Query: 186 EWGTDYAIRVNGIAPGPIK 204
           + G D  I VN IAP  ++
Sbjct: 171 DLGKD-GITVNAIAPSLVR 188

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKG  AL+TGG  GIG+ I  +L   GA +    R +  L   +      G+   G   D
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +  R +  +++++  + F GKL+ILVN A       A+D +   +  ++  +        
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTN-------- 130
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA  +L +                  +   ++A       SA+K A++ +T+SLA EW 
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190
Query: 189 TDYAIRVNGIAPG----PIKDTA 207
            D  IRVN +APG    P+ +TA
Sbjct: 191 KD-NIRVNSVAPGVILTPLVETA 212

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 10/229 (4%)
Query: 8   DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
           D L  KVAL+T    GIGF I+ +L + GA + +  R++  +  AVA L   G+   G  
Sbjct: 11  DPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTV 70
Query: 68  GDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
             V K ED  R+V + +   G +DILV NAA   F     D++   +   ++I+     +
Sbjct: 71  CHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPAL 130
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           M    +  ++K                  A    +  +   +VS  K A+  +T++LA+E
Sbjct: 131 MTKAVVPEMEK------RGGGSVVIVSSIAAFSPSPGFSPYNVS--KTALLGLTKTLAIE 182
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
                 IRVN +APG IK +        +E      + +   + GE  D
Sbjct: 183 LA-PRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPED 230

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L  K+A++TG  SGIG   + +    GA + I GRRK VL +A+A    +G  A+G++ D
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA---EIGGGAVGIQAD 83
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
                +  R+ E      G++D+L   A G   +P  +++   +    + +  G      
Sbjct: 84  SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGEVTEEQYDDTFDRNVKGVLFTVQ 143
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           +AL  L +                  +T   T T      +A+KAA+ S  R+  L+   
Sbjct: 144 KALPLLARGSSVVLTG----------STAGSTGTPAFSVYAASKAALRSFARNWILDL-K 192
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEE 216
           D  IR+N ++PGP  +T G+ +LA ++
Sbjct: 193 DRGIRINTLSPGPT-ETTGLVELAGKD 218

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 14/235 (5%)
Query: 2   ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI 61
           ESPF    L   VA++TG  +GIG  I+    K GA++ +   +     +  AA+   G 
Sbjct: 5   ESPFH---LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG 61
Query: 62  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 121
            AIGLE +V   +    V+++ ++ FGK+ +LVN A G    P  D+  + F    +++ 
Sbjct: 62  KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNL 120
Query: 122 VGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITR 181
              F +   A  +++K                    +   A++      ++KAAV+ +TR
Sbjct: 121 FSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRM---ASY-----GSSKAAVNHLTR 172
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           ++A + G    IRVN IAPG IK  A  + L P EI      +    + GE  DI
Sbjct: 173 NIAFDVGP-MGIRVNAIAPGAIKTDALATVLTP-EIERAMLKHTPLGRLGEAQDI 225

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 13/234 (5%)
Query: 5   FKGDILK--GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP 62
           F  D L+  GK A++TG G+GIG EI++     GA++ +           V  +  LG  
Sbjct: 2   FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
           A     D+   ++   + +  I+  GK+DILVN A G    P  D+    FR   E++  
Sbjct: 62  AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVF 120
Query: 123 GTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRS 182
             F +       ++K                    +   A+        +KAA   + R+
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS--------SKAAASHLVRN 172
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           +A + G +  IRVNGIAPG I   A  S + P EI  K   +    + G+  DI
Sbjct: 173 MAFDLG-EKNIRVNGIAPGAILTDALKSVITP-EIEQKMLQHTPIRRLGQPQDI 224

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 97/235 (41%), Gaps = 17/235 (7%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE---GD 69
           KVA++TG  +GIG   ++   + GA + I GR    L      + + G+    +     D
Sbjct: 7   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD 66
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V        ++ +T+  FGKLDILVN A     +P +  S  G    IE       +   
Sbjct: 67  VTTDAGQDEILSTTLGKFGKLDILVNNAGA--AIP-DSQSKTGTAQSIESYDATLNLNLR 123
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXAT-LHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             +   KK                  A+ LH T  +   + S AKAA+D  TR+ A++  
Sbjct: 124 SVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFP--YYSIAKAAIDQYTRNTAIDL- 180
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDI 236
             + IRVN I+PG +    G +   PEE   K    MA  K        G+  DI
Sbjct: 181 IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDI 235

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 21/224 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG GSG G  ++ +  K GA + I+ R K     A      +G  A+ +  D
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKA---GAERVAGEIGDAALAVAAD 63
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA-GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           + K  D    VE+ ++ FGK+DILVN A  G+    AE + P  F  ++ ++  G ++M 
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            + + + K+                          WY    +A K  V S+T++LA+E  
Sbjct: 124 SKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWY----NATKGWVVSVTKALAIEL- 178
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYM 225
               IRV  + P      AG + L         EEIR K  D +
Sbjct: 179 APAKIRVVALNP-----VAGETPLLTTFMGEDSEEIRKKFRDSI 217

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 19/225 (8%)
Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
           + KVAL+TG G GIG EI+  L K  + +  + R +    S V  + S G  + G  GDV
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV 102
Query: 71  RKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
            K+E+   V+   +     +DILVN A       FL    D   +  RT +         
Sbjct: 103 SKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNL--------- 153
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
               +L Y+ +                  + +  T    Q + S++KA V   T+SLA E
Sbjct: 154 ---NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKE 210
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
             +   I VN IAPG I  ++ ++    E+I+      + A + G
Sbjct: 211 LAS-RNITVNAIAPGFI--SSDMTDKISEQIKKNIISNIPAGRMG 252

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 12/223 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEG 68
           LKGK A++TG   G+G  I+ +LG  GA I + G    T L +      + GI  +  +G
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV+  ED   +V++ ++ FG++DILVN A          +S   +  V+  +    ++  
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCT 122
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
               K + K                  A         Q + +A+KA +   T+S+A E+ 
Sbjct: 123 KAVSKIMLKQKSGKIINITSIAGIIGNAG--------QANYAASKAGLIGFTKSIAKEFA 174
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
               I  N +APG IK    ++ + P++++    + +   +FG
Sbjct: 175 AK-GIYCNAVAPGIIK--TDMTDVLPDKVKEMYLNNIPLKRFG 214

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TGG SG+G E+   L   GA +A     +   +   A    LG  ++ +  D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAA---ELGERSMFVRHD 60
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTFIM 127
           V    D   V+ +     G L++LVN A    L+P   E      F  +++I++   FI 
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAG--ILLPGDMETGRLEDFSRLLKINTESVFIG 118
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIH----VSAAKAAVDSITRSL 183
           C + +  +K+                    +   ++W  I      SA+KAAV ++TR+ 
Sbjct: 119 CQQGIAAMKETGGSII-------------NMASVSSWLPIEQYAGYSASKAAVSALTRAA 165
Query: 184 ALEWGTD-YAIRVNGIAP 200
           AL      YAIRVN I P
Sbjct: 166 ALSCRKQGYAIRVNSIHP 183

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +VAL+TG  SGIG EI+ +LGK G  + +  R +  LR+ +  L   G+ A G   DVR 
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 66
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             +   +V + +  +G +D+LVN A         +L+   +  V+E +  G F +  + L
Sbjct: 67  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 126
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           K                        +H  A  Y    SA+K  V   T++L LE      
Sbjct: 127 KAGGMLERGTGRIVNIASTGGKQGVVH--AAPY----SASKHGVVGFTKALGLEL-ARTG 179
Query: 193 IRVNGIAPGPIK 204
           I VN + PG ++
Sbjct: 180 ITVNAVCPGFVE 191

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +VAL+TG  SGIG EI+ +LGK G  + +  R +  LR+ +  L   G+ A G   DVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             +   +V + +  +G +D+LVN A         +L+   +  V+E +  G F +  + L
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           K                        +H  A  Y    SA+K  V   T++L LE      
Sbjct: 147 KAGGMLERGTGRIVNIASTGGKQGVVH--AAPY----SASKHGVVGFTKALGLEL-ARTG 199
Query: 193 IRVNGIAPGPIK 204
           I VN + PG ++
Sbjct: 200 ITVNAVCPGFVE 211

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +VAL+TG  SGIG EI+ +LGK G  + +  R +  LR+ +  L   G+ A G   DVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             +   +V + +  +G +D+LVN A         +L+   +  V+E +  G F +  + L
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           K                        +H  A  Y    SA+K  V   T++L LE      
Sbjct: 147 KAGGMLERGTGRIVNIASTGGKQGVVH--AAPY----SASKHGVVGFTKALGLEL-ARTG 199
Query: 193 IRVNGIAPGPIK 204
           I VN + PG ++
Sbjct: 200 ITVNAVCPGFVE 211

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +VAL+TG  SGIG EI+ +LGK G  + +  R +  LR+ +  L   G+ A G   DVR 
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             +   +V + +  +G +D+LVN A         +L+   +  V+E +  G F +  + L
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 142
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           K                        +H  A  Y    SA+K  V   T++L LE      
Sbjct: 143 KAGGMLERGTGRIVNIASTGGKQGVVH--AAPY----SASKHGVVGFTKALGLEL-ARTG 195
Query: 193 IRVNGIAPGPIK 204
           I VN + PG ++
Sbjct: 196 ITVNAVCPGFVE 207

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +VAL+TG  SGIG EI+ +LGK G  + +  R +  LR+ +  L   G+ A G   DVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             +   +V + +  +G +D+LVN A         +L+   +  V+E +  G F +  + L
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           K                        +H  A  Y    SA+K  V   T++L LE      
Sbjct: 147 KAGGMLERGTGRIVNIASTGGKQGVVH--AAPY----SASKHGVVGFTKALGLEL-ARTG 199
Query: 193 IRVNGIAPG 201
           I VN + PG
Sbjct: 200 ITVNAVCPG 208

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE--GDV 70
           +V L+TGGGSG+G   +++L   GA ++++      L ++ AA+      A  L    DV
Sbjct: 14  RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV 73
Query: 71  RKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
                    V +T   FG++D    NA       P E  +   F  V+ I+  G F+   
Sbjct: 74  SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 133
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           + LK +++                            Q   +AAK  V  +TR+ A+E+G 
Sbjct: 134 KVLKIMREQGSGMVVNTASVGGIRGIGN--------QSGYAAAKHGVVGLTRNSAVEYGR 185
Query: 190 DYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMA---AYKFGEKWDI 236
            Y IR+N IAPG    P+ + + + +L PE  R  A +++    + ++GE  +I
Sbjct: 186 -YGIRINAIAPGAIWTPMVENS-MKQLDPENPRKAAEEFIQVNPSKRYGEAPEI 237

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +VAL+TG  SGIG EI+ +LGK G  + +  R +  LR+ +  L   G+ A G   DVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             +   +V + +  +G +D+LVN A         +L+   +  V+E +  G F +  + L
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           K                        +H  A  Y    SA+K  V   T++L LE      
Sbjct: 147 KAGGMLERGTGRIVNIASTGGKQGLVH--AAPY----SASKHGVVGFTKALGLEL-ARTG 199
Query: 193 IRVNGIAPGPIK 204
           I VN + PG ++
Sbjct: 200 ITVNAVCPGFVE 211

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           L GKVAL TG G GIG  I+++LG+ GA++ +  G         VA L  LG   + ++ 
Sbjct: 19  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+ K  + V + +  ++HFG LD +++ +         +++   F  V  +++ G F + 
Sbjct: 79  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 138
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV--SAAKAAVDSITRSLALE 186
            + LK+ ++                  +++    T    H   + +KAAV+   R+ A++
Sbjct: 139 QQGLKHCRR-----------GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVD 187
Query: 187 WGTDYAIRVNGIAPGPIK 204
            G    + VN IAPG +K
Sbjct: 188 CGAK-GVTVNCIAPGGVK 204

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +VAL+TG  SGIG EI+ +LGK G  + +  R +  LR+ +  L   G+ A G   DVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             +   +V + +  +G +D+LVN A         +L+   +  V+E +  G F +  + L
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           K                        +H  A  Y    SA+K  V   T++L LE      
Sbjct: 147 KAGGMLERGTGRIVNIASTGGKQGVVH--AAPY----SASKHGVVGFTKALGLEL-ARTG 199
Query: 193 IRVNGIAPGPIK 204
           I VN + PG ++
Sbjct: 200 ITVNAVCPGFVE 211

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI 64
           F+   L  +V ++TGGGSGIG   +    K+GA + +    +    +AV   + +G  A 
Sbjct: 20  FQSXDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNED---AAVRVANEIGSKAF 76
Query: 65  GLEGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEID 120
           G+  DV   +DA   VE T   +G++D+LVN A     GN +   E+     +  +  ++
Sbjct: 77  GVRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEET----WDRIXSVN 132
Query: 121 SVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWY---QIHVSAAKAAVD 177
             G F+     +   ++                   T  YTAT     +    A+K A+ 
Sbjct: 133 VKGIFLCSKYVIPVXRRNGGGSIIN-----------TTSYTATSAIADRTAYVASKGAIS 181
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPI 203
           S+TR+ A +   +  IRVN +APG I
Sbjct: 182 SLTRAXAXDHAKE-GIRVNAVAPGTI 206

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +VAL+TG  SGIG EI+ +LGK G  + +  R +  LR+ +  L   G+ A G   DVR 
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             +   +V + +  +G +D+LVN A         +L+   +  V+E +  G F +  + L
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVL 142
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           K                        +H  A  Y    SA+K  V   T++L LE      
Sbjct: 143 KAGGMLERGTGRIVNIASTGGKQGVVH--AAPY----SASKHGVVGFTKALGLEL-ARTG 195
Query: 193 IRVNGIAPGPIK 204
           I VN + PG ++
Sbjct: 196 ITVNAVCPGFVE 207

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 19/231 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+ KVA++TG   GIG E S  L + GA + +    +T L  A A   S+G  A+    D
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAA---SVGRGAVHHVVD 65
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +        +++ TI+ FG+LDI+ N AA     + LV    ++ + +     +++ GT 
Sbjct: 66  LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLV--TQMTVDVWDDTFTVNARGTM 123
Query: 126 IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
           +MC  A+  L                    AT H  A       +  KAA++++TR +A 
Sbjct: 124 LMCKYAIPRL-------ISAGGGAIVNISSATAH-AAYDMSTAYACTKAAIETLTRYVAT 175
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           ++G  + +R N IAPG ++ T  +    P+ I      +  A + GE  +I
Sbjct: 176 QYGR-HGVRCNAIAPGLVR-TPRLEVGLPQPIVDIFATHHLAGRIGEPHEI 224

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 10/196 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+ KVAL+T    GIG  I+ +L + GA + +  R++  +   VA L   G+   G    
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 71
Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V K ED  R+V   +N  G +DILV NAA   F     D +   +  ++ ++   T +M 
Sbjct: 72  VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMT 131
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
              +  ++K                     H        +VS  K A+  +T++LA+E  
Sbjct: 132 KAVVPEMEK------RGGGSVLIVSSVGAYHPFPNLGPYNVS--KTALLGLTKNLAVELA 183
Query: 189 TDYAIRVNGIAPGPIK 204
               IRVN +APG IK
Sbjct: 184 -PRNIRVNCLAPGLIK 198

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
           LK + AL+TGG SGIG   ++   + GA +AI  +   +   +   A +   G  A+ L 
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFI 126
           GD+     A  +V       G LDIL   A     +P  +DL+   F+    ++    F 
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +  EA+  L K                      Y  + + +  +A KAA+ + +R LA +
Sbjct: 167 ITQEAIPLLPKGASIITTSSIQA----------YQPSPHLLDYAATKAAILNYSRGLAKQ 216
Query: 187 WGTDYAIRVNGIAPGPI 203
              +  IRVN +APGPI
Sbjct: 217 VA-EKGIRVNIVAPGPI 232

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 26/232 (11%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR--------RKTVLRSAVAALHSLGI 61
              K  ++TG  +GIG   ++   + GA + I GR        R+ +L+S V+      +
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 62  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVI 117
            A     DV   +   +++ ST+  FGK+D+LVN A       F     D   + +   +
Sbjct: 64  VA-----DVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTL 118
Query: 118 EIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVD 177
           +++      M  +   +L                        Y A         AKAA+D
Sbjct: 119 KLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAI--------AKAALD 170
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229
             TRS A++    + IRVN ++PG ++     +   P++   K  ++MA++K
Sbjct: 171 QYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK 221

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+ A++TGG  GIG  I+  L K GA +AI        ++ VA L + G     +E D
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG---FAVEVD 66
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V KR      ++  I+  G  D+L   A  + + PA D++   +    ++++ G F+   
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQ 126
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A ++                     A L         H SA+K AV   T++LA E   
Sbjct: 127 IACRHFLASNTKGVIVNTASLAAKVGAPLLA-------HYSASKFAVFGWTQALAREMAP 179
Query: 190 DYAIRVNGIAPGPIKDT---------AGVSKLAPEEIRSK 220
              IRVN + PG +K           A +  + PE +R++
Sbjct: 180 KN-IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAE 218

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 16/230 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM---GRRKTVLRSAVAALHSLGIPAIGL 66
           L+GKV+L+TG   GIG  I+ +L   G+ + I    G R   +   +A  +  G+ A G+
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIA--NKYGVKAHGV 62
Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           E ++   E   +  E   N    +DILVN A          +S   +  V++++  GTF+
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFL 122
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +   +L+ + K                  + + +T    Q++ S  KA +   T+SLA E
Sbjct: 123 VTQNSLRKMIK--------QRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKE 174
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
                 + VN +APG I+    ++ +  EEI+ K  + +   +FG   ++
Sbjct: 175 LAPRNVL-VNAVAPGFIE--TDMTAVLSEEIKQKYKEQIPLGRFGSPEEV 221

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 24/215 (11%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            + KV ++TG G GIG   +  L + GAA+ +         +    + + G  AI +  D
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVG 123
           V   E A  + + T+  FG +D LVN AA       +FL+    + P  ++  + ++  G
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLT---IDPEYYKKFMSVNLDG 123
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDSITRS 182
                    K + K                       TA W Y  +   AK  ++ +T+ 
Sbjct: 124 ALWCTRAVYKKMTK------------RGGGAIVNQSSTAAWLYSNYYGLAKVGINGLTQQ 171
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 217
           L+ E G    IR+N IAPGPI DT       P+E+
Sbjct: 172 LSRELG-GRNIRINAIAPGPI-DTEANRTTTPKEM 204

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 14/199 (7%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE-- 67
             GK  ++TG  +GIG   ++   K GA + I GR +  L      +   G+PA  +   
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83
Query: 68  -GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGT 124
             DV +      ++ +T+  FGK+DILVN A  N        D     ++   +++    
Sbjct: 84  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143
Query: 125 FIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLA 184
             M  +  ++L K                  +   Y A         AKAA+D  TR  A
Sbjct: 144 IEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYA--------CAKAALDQYTRCTA 195
Query: 185 LEWGTDYAIRVNGIAPGPI 203
           ++    + +RVN ++PG +
Sbjct: 196 IDL-IQHGVRVNSVSPGAV 213

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 101/235 (42%), Gaps = 17/235 (7%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI 64
           F+   L+GKVAL+TG   GIG  I+L+LG+ GA +       +        L + G+   
Sbjct: 20  FQSMSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGA 79
Query: 65  GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDS 121
           GL  DV   E     +E    H G+  I+VN A     N LV  +D   + +  V+  + 
Sbjct: 80  GLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKD---DEWFDVVNTNL 136
Query: 122 VGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITR 181
              + +    L+ + K                  A         Q + +AAKA ++  TR
Sbjct: 137 NSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAG--------QTNYAAAKAGLEGFTR 188
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           +LA E G+  AI VN +APG I DT    +L PE  R      +   + G+  +I
Sbjct: 189 ALAREVGS-RAITVNAVAPGFI-DTDMTREL-PEAQREALLGQIPLGRLGQAEEI 240

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 10  LKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALH-SLGIPAIG 65
           LKGKV ++TG  G  G+G E +    + GAA+AI    R       V  L  + GI A  
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
            +  V   E   ++V+  +  FG++D  +  A         D S   +  V+++D  GTF
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTF 137
Query: 126 IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
             C +A+ +  K                  A      T Y +    AKA    + RSLA 
Sbjct: 138 -HCAKAVGHHFK-ERGTGSLVITASMSGHIANFPQEQTSYNV----AKAGCIHMARSLAN 191
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 219
           EW  D+A RVN I+PG I DT G+S   P+E + 
Sbjct: 192 EW-RDFA-RVNSISPGYI-DT-GLSDFVPKETQQ 221

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 89/213 (41%), Gaps = 20/213 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+VAL+TGG SG+G  +  +    GA +A++ +    LR    A H  G  A+G+ GD
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA-H--GGNAVGVVGD 59
Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPN----GFRTVIEIDSVGT 124
           VR  +D  R  E  +  FGK+D L+ NA   ++     DL  +     F  +  ++  G 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119
Query: 125 FIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLA 184
                  L  L                        YTAT         K AV  + R +A
Sbjct: 120 IHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTAT---------KHAVVGLVRQMA 170
Query: 185 LEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEE 216
            E      +RVNG+APG +  D  G S L   E
Sbjct: 171 FELAPH--VRVNGVAPGGMNTDLRGPSSLGLSE 201

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 14/231 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK KV ++TG GSGIG  I+ +   + + +  +   +  L   V  L  +G   +G++ D
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA-GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V K++D    V  T   + ++D+L N A   + + P  ++S   +  V+ ++    F   
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSS 124
Query: 129 HEALK-YLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
              +   LK+                  A   YT          AK  +  +TRS+A  +
Sbjct: 125 RAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYT---------VAKHGLIGLTRSIAAHY 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMA-AYKFGEKWDI 236
           G D  IR   + PG +K   G+    P E+  +  T  M+ + +  E  DI
Sbjct: 176 G-DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDI 225

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 18/212 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-------GIP 62
           L GK   +TG   GIG  I+L+  + GA +AI  +           +HS        G  
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
            + L+ D+R+ +     V +T++ FG +DILVN A+  +L    D     F    ++++ 
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNAR 123
Query: 123 GTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV--SAAKAAVDSIT 180
           G+F+     L +L +                          W+  H   + AK     +T
Sbjct: 124 GSFVCAQACLPHLLQAPNPHILTLAPPP--------SLNPAWWGAHTGYTLAKXGXSLVT 175
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL 212
             LA E+G    + +N + P  +  T  ++ L
Sbjct: 176 LGLAAEFGPQ-GVAINALWPRTVIATDAINXL 206

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 16/192 (8%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           K+A++TG GSG+G  +++ L   G  +A+ GRR   L+   A    +G  A+ +  DV  
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAA---EIGDDALCVPTDVTD 85
Query: 73  REDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
            +    +  +T+  FG++D+L  NA  G   +P EDL+   ++ V++ +  G F+   EA
Sbjct: 86  PDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQEA 145
Query: 132 LKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
            + + K                  +   Y+A +     +A K A+  +T+S +L+     
Sbjct: 146 FR-VXKAQEPRGGRIINNGSISATSPRPYSAPY-----TATKHAITGLTKSTSLDG---- 195
Query: 192 AIRVNGIAPGPI 203
             RV+ IA G I
Sbjct: 196 --RVHDIACGQI 205

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 8/192 (4%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KVAL+TG G GIG  I+L+L K G A+AI        ++  + ++  G  A+ ++ DV  
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
           R+     VE      G  D++VN A      P E ++P     V  I+  G       A+
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           +  KK                     H       ++ S++K AV  +T++ A +      
Sbjct: 123 EAFKKEGHGGKIINACSQAG------HVGNPELAVY-SSSKFAVRGLTQTAARDL-APLG 174
Query: 193 IRVNGIAPGPIK 204
           I VNG  PG +K
Sbjct: 175 ITVNGYCPGIVK 186

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 14/240 (5%)
Query: 2   ESPFKGD---ILKGKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH 57
           E+P + D   +LKGKV L+T   G+GIG   + +    GA + I    +  L      L 
Sbjct: 9   EAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA 68
Query: 58  SLGIPAI-GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
            LG+  +  +  DV   E    ++  T+   G+LD+LVN A      P  D++   +  V
Sbjct: 69  DLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRV 128
Query: 117 IEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAV 176
           + +           AL+Y +                   + L + A   Q H +AAKA V
Sbjct: 129 LNVTLTSVMRATRAALRYFR-------GVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGV 181
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
            ++TR  A+E   ++ +R+N ++P  I     + K +  E+  +     A  +  E W++
Sbjct: 182 MALTRCSAIE-AVEFGVRINAVSP-SIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEV 239

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 96/241 (39%), Gaps = 32/241 (13%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           LKGKVAL+TG   GIG  I+ +L   GA +AI  G RK      V  + S G  A  +  
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 69  DVRKREDAVRVVESTINHFG------KLDILVNAAA---GNFLVPAEDLSPNGFRTVIEI 119
           ++        +  S  N         K DIL+N A    G F+   E+ +   F   + +
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI---EETTEQFFDRXVSV 121
Query: 120 DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQ----IHVSAAKAA 175
           ++   F +  +AL  L+                     +   AT       I  S  K A
Sbjct: 122 NAKAPFFIIQQALSRLRDNSRII--------------NISSAATRISLPDFIAYSXTKGA 167
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
           +++ T +LA + G    I VN I PG +K       L+    +  AT   A  + GE  D
Sbjct: 168 INTXTFTLAKQLGA-RGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVED 226
Query: 236 I 236
           I
Sbjct: 227 I 227

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 11/227 (4%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L  +VA++TG   GIG  I+L+L + GA +      +       AA    G+   G   +
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN 85
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V        +VEST+  FG L++LVN A       A  +  + +  VI+ +    F +  
Sbjct: 86  VNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSR 145
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             L+ + K                  + +       Q++ +AAKA V  +TR+LA E G+
Sbjct: 146 AVLRPMMK--------ARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGS 197
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
              I VN +APG I DT  ++K  P+E ++     +   + G   DI
Sbjct: 198 -RGITVNCVAPGFI-DT-DMTKGLPQEQQTALKTQIPLGRLGSPEDI 241

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 96/231 (41%), Gaps = 17/231 (7%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEG 68
           L+G+  ++TGG  GIG  I+    + GA +A+ GR    + + VA L  LG    IG++ 
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIM 127
           DV  R     +    +  FG +D+ V A AG F   P   ++P     +  ++  GTF  
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDV-VCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYA 126
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQ--IHVSAAKAAVDSITRSLAL 185
               L  L                    +++    T Y    H  A KAA     R+ A+
Sbjct: 127 VQACLDAL---------IASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAI 177
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           E    + I VN I PG I  T G+ +   E I S A   + A   G   DI
Sbjct: 178 EL-APHKITVNAIMPGNIM-TEGLLENGEEYIASMARS-IPAGALGTPEDI 225

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           + K AL+TG   G+G   +++L ++G  I I   R K         +  LG+  + ++ +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN 62
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V +      + +     FG+LD+ VN AA   L P  +L    +   + I++        
Sbjct: 63  VGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQ 122
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           EA K ++K                   ++ Y   +  + VS  KAA++++TR LA+E   
Sbjct: 123 EAAKLMEK------NGGGHIVSISSLGSIRYLENYTTVGVS--KAALEALTRYLAVELSP 174
Query: 190 DYAIRVNGIAPGPIKDTA 207
              I VN ++ G I   A
Sbjct: 175 KQII-VNAVSGGAIDTDA 191

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 10/195 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K  L+TGG  GIG  I  +    GA I    R +  L   ++     G    G   D
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71
Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
              R +  +++++  + F GKLDIL+N        P  D +   F   I  +    + + 
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 131
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A   LK                        +A+   I+ SA K A++ + R+LA EW 
Sbjct: 132 QLAHPLLKASGCGNIIFMSSIAGVV-------SASVGSIY-SATKGALNQLARNLACEWA 183
Query: 189 TDYAIRVNGIAPGPI 203
           +D  IR N +AP  I
Sbjct: 184 SD-GIRANAVAPAVI 197

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 20/229 (8%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           K AL+TG   GIG  I+LQL + G  +A+     K    + V  + + G+ +  ++ +V 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 72  KREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
             ++   +++  ++ FG LD+LVN A     N L+    +    +  VI+ +  G F   
Sbjct: 71  DADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMR---MKEQEWDDVIDTNLKGVFNCI 127
Query: 129 HEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
            +A  + L++                     +Y AT         KA V  +T+S A E 
Sbjct: 128 QKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVAT---------KAGVIGLTKSAAREL 178
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
            +   I VN +APG I   + ++    +E++ +    +   +FG+  DI
Sbjct: 179 AS-RGITVNAVAPGFI--VSDMTDALSDELKEQMLTQIPLARFGQDTDI 224

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG  +GIG +++L   + GA +A+  R    L+     +  +G  A+ +  D
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V + +    +++      G +DI V  A    +    D+    F+ + + +  G F+   
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQ 149
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI-HVSAAKAAVDSITRSLALEWG 188
            A + +                       H      Q+ H   +KAAV  +T+++A+E  
Sbjct: 150 AAARAMVDQGLGGTIITTASMSG------HIINIPQQVSHYCTSKAAVVHLTKAMAVEL- 202
Query: 189 TDYAIRVNGIAPGPIK 204
             + IRVN ++PG I+
Sbjct: 203 APHQIRVNSVSPGYIR 218

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 14/197 (7%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG   G+GF  +  L   GA + +   R T+L  +V  L   G  A G+  D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 70  VRKREDAVRVVESTINHFG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V   E A+    S ++  G  +DIL+N A   +  P  +L    ++ VI+ +    F++ 
Sbjct: 67  VTD-ELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVS 125
Query: 129 HEALKYL--KKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
             A K +  +                       YT         AAK  +  +T S+A E
Sbjct: 126 RSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT---------AAKGGIKMLTCSMAAE 176
Query: 187 WGTDYAIRVNGIAPGPI 203
           W   + I+ N I PG I
Sbjct: 177 WA-QFNIQTNAIGPGYI 192

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIGLEG 68
           L GK A +TGG  GIG  I+ +L   GAA+A+          AV + +   G  A+ +  
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D R  E   + +  T+   G LDILVN+A      P E+ +   F  V  ++    F+  
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAI 148
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV-SAAKAAVDSITRSLALEW 187
             A ++L                    + L     W  I + SA+KAA+  +T+ LA + 
Sbjct: 149 RSASRHLGD----------GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDL 198
Query: 188 GTDYAIRVNGIAPG 201
           G    I VN + PG
Sbjct: 199 GP-RGITVNIVHPG 211

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 7/194 (3%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           KV L+TGG  GIG   +L   + G A+A+            V  +   G  A+ ++ DV 
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVA 85
Query: 72  KREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
           K  + +   E+     G+L  LV NA   +     + ++    +   EI+  G+F+   E
Sbjct: 86  KEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCARE 145
Query: 131 ALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
           A+K  +                   A L     +  +  +AAK A+D+ T  LA E  T+
Sbjct: 146 AVK--RXSTRYGGSGGSIVNVSSAAARLGSPGQY--VDYAAAKGAIDTFTLGLAKEVATE 201
Query: 191 YAIRVNGIAPGPIK 204
             IRVN + PG I+
Sbjct: 202 -GIRVNAVRPGIIE 214

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L  +VA++TGG   IG      L + GA + I    + +   AV  L   G     +  D
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIM 127
           V   E     V S     G++DILV A AG  +  V AED++   +   ++I+  G F  
Sbjct: 71  VTNTESVQNAVRSVHEQEGRVDILV-ACAGICISEVKAEDMTDGQWLKQVDINLNGMFRS 129
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
           C    + + +                  + L       Q   +A+KA V    RSLA EW
Sbjct: 130 CQAVGRIMLEQKQGVIVAIGSM------SGLIVNRPQQQAAYNASKAGVHQYIRSLAAEW 183
Query: 188 GTDYAIRVNGIAPGPIKDT 206
              + IR N +AP  I+ T
Sbjct: 184 AP-HGIRANAVAPTYIETT 201

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 19/221 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
           L G    +TG   GIG  I+L+  K GA I I  +           + +A   + ++G  
Sbjct: 43  LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 102
Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
           A+    DVR  +     VE  I  FG +DILVN A+   L    D        ++ +++ 
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162
Query: 123 GTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV--SAAKAAVDSIT 180
           GT++     + YLKK                    L+    W++ H   + AK  +    
Sbjct: 163 GTYLASKACIPYLKK--------SKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYV 214
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 221
             +A E+  +  I VN + P     TA +  L    I S+ 
Sbjct: 215 LGMAEEFKGE--IAVNALWPKTAIHTAAMDMLGGPGIESQC 253

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 17/230 (7%)
Query: 6   KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA---VAALHSLGIP 62
           K D+L+ ++ L+TG   GIG E +L   ++GA + ++GR +  LR     +A    +   
Sbjct: 8   KQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQ 67
Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 121
              L+      E+  +V +    H+ +LD +L NA     + P  +  P  ++ V++++ 
Sbjct: 68  WFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNV 127
Query: 122 VGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITR 181
             TF++    L  L K                  A     AT        +K A + + +
Sbjct: 128 NATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAT--------SKFATEGMMQ 179
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAY 228
            LA E+  + ++RVN I PG  + +   S      P+++++ A D M  Y
Sbjct: 180 VLADEY-QNRSLRVNCINPGGTRTSMRASAFPTEDPQKLKTPA-DIMPLY 227

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           K AL+TG   GIG  I+LQL + G  +A+     K    + V  + + G+ +  ++ +V 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 72  KREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
             ++    ++  ++ FG LD+LVN A     N L   ++     +  VI+ +  G F   
Sbjct: 65  DADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQE---WDDVIDTNLKGVFNCI 121
Query: 129 HEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
            +A  + L++                     +Y AT         KA V  +T+S A E 
Sbjct: 122 QKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVAT---------KAGVIGLTKSAAREL 172
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
            +   I VN +APG I   +  +    +E++ +    +   +FG+  DI
Sbjct: 173 AS-RGITVNAVAPGFI--VSDXTDALSDELKEQXLTQIPLARFGQDTDI 218

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 78/193 (40%), Gaps = 11/193 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+ AL+TG   G+G  ++  L   GA I I G   + +   V    ++G  A  +  D
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD 83
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V    + +            +DILVN A   F  P  +L    ++ VI+ +    F++  
Sbjct: 84  VTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGR 143
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLALEWG 188
           EA K +                    AT+  YT          AK  +  +TR++A EW 
Sbjct: 144 EAAKRMIPRGYGKIVNIGSLTSELARATVAPYT---------VAKGGIKMLTRAMAAEW- 193
Query: 189 TDYAIRVNGIAPG 201
             Y I+ N I PG
Sbjct: 194 AQYGIQANAIGPG 206

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 97/235 (41%), Gaps = 25/235 (10%)
Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
           +  GK  L+TGG  GIG  I+    + GA +A+   R      A A      I     + 
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA------IGGAFFQV 56
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS---PNGFRTVIEIDSVGTF 125
           D+    + VR VE      G++D+LVN AA     P   L+   P  +R V+E++     
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAA--IAAPGSALTVRLPE-WRRVLEVNLTAPM 113
Query: 126 IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            +   A + ++K                  +     A       +A+K  + ++TRSLAL
Sbjct: 114 HLSALAAREMRK--------VGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLAL 165
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDI 236
           +      IRVN +APG I   A +  +A    PE  R    D  A  + G+  ++
Sbjct: 166 DL-APLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEV 219

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 21/212 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
           L+G+VA +TG   G G   ++++   GA   A+ I G+  + +    A+   L      +
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 67  EG----------DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
           E           D R  +   +VV+  +   G+LDI+V  A        +D++P  FR V
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV 128
Query: 117 IEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAV 176
           ++I+  GT+         + +                           + IH +A+K AV
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQP-------FMIHYTASKHAV 181
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 208
             + R+ A E G  ++IRVN + PGP+    G
Sbjct: 182 TGLARAFAAELGK-HSIRVNSVHPGPVNTPMG 212

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV----LRSAVAALHSLGIPAI 64
           +LKGKVA++TG  SGIG  I+  L   GA I + G         +R+ +AA H  G+  +
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVL 58
Query: 65  GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
               D+ K E    +V++ +   G++DILVN A        ED     +  ++ ++    
Sbjct: 59  YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAV 118
Query: 125 FIMCHEALKYLKK 137
           F     AL ++KK
Sbjct: 119 FHGTAAALPHMKK 131

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV----LRSAVAALHSLGIPAI 64
           +LKGKVA++TG  SGIG  I+  L   GA I + G         +R+ +AA H  G+  +
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVL 58
Query: 65  GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
               D+ K E    +V++ +   G++DILVN A        ED     +  ++ ++    
Sbjct: 59  YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAV 118
Query: 125 FIMCHEALKYLKK 137
           F     AL ++KK
Sbjct: 119 FHGTAAALPHMKK 131

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV----LRSAVAALHSLGIPAI 64
           +LKGKVA++TG  SGIG  I+  L   GA I + G         +R+ +AA H  G+  +
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVL 58
Query: 65  GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
               D+ K E    +V++ +   G++DILVN A        ED     +  ++ ++    
Sbjct: 59  YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAV 118
Query: 125 FIMCHEALKYLKK 137
           F     AL ++KK
Sbjct: 119 FHGTAAALPHMKK 131

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 17/219 (7%)
Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGL 66
           ++ GKVAL+TG   GIG   +  L   GA +A++           AALH    P   + +
Sbjct: 4   MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFI 63
Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           + DV  ++         ++HFG+LDILVN A  N        +   +   ++I+ V    
Sbjct: 64  QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINLVSVIS 115
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
             +  L Y+ K                    +     +      A+K  +   TRS AL 
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY-----CASKHGIVGFTRSAALA 170
Query: 187 WG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 224
               +  +R+N I PG + +TA +  +  EE   +  +Y
Sbjct: 171 ANLMNSGVRLNAICPGFV-NTAILESIEKEENMGQYIEY 208

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 83/189 (43%), Gaps = 16/189 (8%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           + AL+TGG  GIG  I+  L   G  +AI  R          A  SLG  A+ L  D+ K
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE------EAAQSLG--AVPLPTDLEK 54
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
            +D   +V+  +   G L +LV+AAA N   PA +LS   +R V+ +     F++   A 
Sbjct: 55  -DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
            ++ +                    +   A       + AK A+  +TR+LA EW     
Sbjct: 114 PHMAEAGWGRVLFIGSVTTFTAGGPVPIPA------YTTAKTALLGLTRALAKEW-ARLG 166
Query: 193 IRVNGIAPG 201
           IRVN + PG
Sbjct: 167 IRVNLLCPG 175

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 15/196 (7%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GK AL+TG   GIG   +    + GA +AI        R A A    +G  A  ++ D
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA---EIGPAAYAVQXD 62
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V +++     + +T+ H G LDILVN AA   L P  +++   +  +  I+  GT     
Sbjct: 63  VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQ 122
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLH--YTATWYQIHVSAAKAAVDSITRSLALEW 187
            A +                        L   Y AT         KAAV S+T+S  L+ 
Sbjct: 123 AAARQXIAQGRGGKIINXASQAGRRGEALVAIYCAT---------KAAVISLTQSAGLDL 173
Query: 188 GTDYAIRVNGIAPGPI 203
              + I VN IAPG +
Sbjct: 174 -IKHRINVNAIAPGVV 188

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             G+ A++TGG SGIG   + +  + GA + +    +  L  AV  L   G  A G+  D
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
           VR  ++ VR+ +      G +D++ + A      P   ++ + +R VI+ID  G+
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGS 143

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK KV L+TG G+G+G E +    K+GA + +   +       V  + + G  A   + D
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT--KTVDEIKAAGGEAWPDQHD 377
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V K  +A  ++++ I+ +G +DILVN A          +S   + +V ++  +GTF +  
Sbjct: 378 VAKDSEA--IIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSR 435
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A  Y                     +T      + Q + S++KA +  +++++A+E G 
Sbjct: 436 LAWPYF--------VEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIE-GA 486
Query: 190 DYAIRVNGIAP 200
              I+VN +AP
Sbjct: 487 KNNIKVNIVAP 497

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 80/196 (40%), Gaps = 15/196 (7%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG   GIG   +    + GA +AI       L +A A    +G  A  +  D
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIA---DINLEAARATAAEIGPAACAIALD 59
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  +    R V   ++ +G +DILVN AA   L P  +++   +  +  I+  GT  M  
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATL--HYTATWYQIHVSAAKAAVDSITRSLALEW 187
              + +                      L   Y AT         KAAV S+T+S  L  
Sbjct: 120 AVARAMIAGGRGGKIINMASQAGRRGEALVGVYCAT---------KAAVISLTQSAGLNL 170
Query: 188 GTDYAIRVNGIAPGPI 203
              + I VN IAPG +
Sbjct: 171 -IRHGINVNAIAPGVV 185

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 16/198 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
           + GKVA++TG  SGIG  I+    K GA I ++ R+   L  A  +L    G+  + +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           DV   E    VVES  + FG  DILVN A   +   ++ A D     +  ++ + +V   
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAV--- 121
Query: 126 IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
                    L +                  +       WY+   +  KAA+   +++LA 
Sbjct: 122 --------RLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLAT 173
Query: 186 EWGTDYAIRVNGIAPGPI 203
           E   D  IRVN I PG I
Sbjct: 174 EVIKDN-IRVNCINPGLI 190

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 12/213 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGKVA +TG   GIG+ ++    + GA +AI          A     + G+ +   + +
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDL-SPNGFRTVIEIDSVGTFIM 127
           +   +     +      FG +D+ V NA       P  D+ + + +  +I +D  G +  
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
            H   K  KK                            Q   + AKAA   + +SLA+EW
Sbjct: 152 SHNIGKIFKKNGKGSLIITSSISGKIVNIPQ------LQAPYNTAKAACTHLAKSLAIEW 205
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 220
                 RVN I+PG I DT  ++  A +++++K
Sbjct: 206 AP--FARVNTISPGYI-DT-DITDFASKDMKAK 234

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           +KG V L+TG   GIG   +  L   G  + +M R +  L++  A L      A+ L GD
Sbjct: 4   MKGAV-LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG----ALPLPGD 58
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           VR+  D  R V +    FG+L  LVN A    + P  +L+   +R V++ +  G F+   
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIR 118
Query: 130 EALKYLKK 137
            A+  L +
Sbjct: 119 HAVPALLR 126

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG  SGIG   +  L   GAA+AI  RR   LR+    L + G     LE D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  R+     V ST+   G LDILVN A    L P ED     +  +I+ + +G   M  
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTR 124
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            AL +L +                        A  YQ    A K  V++ + +L  E  T
Sbjct: 125 AALPHLLRSKGTVVQMSSIAGRVNV-----RNAAVYQ----ATKFGVNAFSETLRQEV-T 174
Query: 190 DYAIRVNGIAPG 201
           +  +RV  I PG
Sbjct: 175 ERGVRVVVIEPG 186

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 7/210 (3%)
Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           V L+TGG  GIG  +     + G  + +     +    + VAA+   G  A+ + GDV  
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87
Query: 73  REDAVRVVESTINHFGKLDILVNAAA-GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
             D      +    FG+LD LVN A   ++    ++ S       + ++  G+ +   EA
Sbjct: 88  AADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAEA 147
Query: 132 LKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
           ++   +                  A +  +AT Y +  +A+KAA+D+ T  LA E   + 
Sbjct: 148 VRRXSR---LYSGQGGAIVNVSSXAAILGSATQY-VDYAASKAAIDTFTIGLAREVAAE- 202
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 221
            IRVN + PG I+     S   P+  R  A
Sbjct: 203 GIRVNAVRPGIIETDLHASGGLPDRAREXA 232

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 27/217 (12%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K  L+TG   GIG        K GA +      +  LR A  A+ +   P +    D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH--PVV---XD 57
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNF--LVPAEDLSPNGFRTVIEIDSVGT 124
           V       R     + H G+LD +V+ A     NF    P ED     +  V+ ++  G+
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLED-----WELVLRVNLTGS 112
Query: 125 FIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           F++   A +  ++                  A+  Y     Q + +A+ A V  +TR+LA
Sbjct: 113 FLVAKAASEAXRE---------KNPGSIVLTASRVYLGNLGQANYAASXAGVVGLTRTLA 163
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 221
           LE G  + IRVN +APG I +T   +K+ PE++R KA
Sbjct: 164 LELGR-WGIRVNTLAPGFI-ETRXTAKV-PEKVREKA 197

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 101/244 (41%), Gaps = 35/244 (14%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPA 63
           F+      KVA++TG   GIG  I+ +L   G  + I    K      VA  + + G  A
Sbjct: 20  FQSXXETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKA 79
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG---FRTVIEID 120
           +  + DV       R+  +    FG +D+LVN A    + P   ++  G   F  VI ++
Sbjct: 80  LTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAG---IXPLTTIAETGDAVFDRVIAVN 136
Query: 121 SVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSIT 180
             GTF    EA + L+                     LH +   Y I+ +AAKA V++ T
Sbjct: 137 LKGTFNTLREAAQRLR------VGGRIINXSTSQVGLLHPS---YGIY-AAAKAGVEAXT 186
Query: 181 RSLALEW-GTDYAIRVNGIAPGP-------------IKDTAGVSKLAPEEIRSKATDYMA 226
             L+ E  G D  I VN +APGP             ++D    +KLAP E      D   
Sbjct: 187 HVLSKELRGRD--ITVNAVAPGPTATDLFLEGKSDEVRDR--FAKLAPLERLGTPQDIAG 242
Query: 227 AYKF 230
           A  F
Sbjct: 243 AVAF 246

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 18/196 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEG 68
           L GK +L+TG  SGIG  I+  L K G+ + I G  +  L+S   AL  +  I    L  
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLA- 70
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
               +E+   ++  T N    LDILV  A       A  +    F  VI+I+    FI+ 
Sbjct: 71  ---NKEECSNLISKTSN----LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILN 123
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA+K + +                  + +       Q +  A+KA +  +T+SL+ E  
Sbjct: 124 REAIKKMIQ--------KRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVA 175
Query: 189 TDYAIRVNGIAPGPIK 204
           T   I VN +APG IK
Sbjct: 176 T-RGITVNAVAPGFIK 190

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 26/234 (11%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI 64
           F+ DI  G+  L+TGG SGIG  I++Q  + GA +  +G            +H+   P I
Sbjct: 4   FQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDAD-------GVHAPRHPRI 56
Query: 65  GLEG-DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             E  D+   +   R+ E+      +LD+LVN A  +      DL+   F  V+ ++   
Sbjct: 57  RREELDITDSQRLQRLFEA----LPRLDVLVNNAGISRDREEYDLAT--FERVLRLNLSA 110
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYT-ATWYQIHVSAAKAAVDSITRS 182
             +    A   L +                  A+++ T  +  +   SA+K A+  +TRS
Sbjct: 111 AMLASQLARPLLAQ----------RGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRS 160
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           LA E+  +  IRVN IAPG I    G    A  E   +        ++GE  ++
Sbjct: 161 LACEYAAER-IRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEV 213

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 79/194 (40%), Gaps = 10/194 (5%)
Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA-ALHSLGIPAIGLEGDV 70
           GK  L+TG   GIG EI+  L   G  + I  R    +  A+   L   G  A  ++ D 
Sbjct: 29  GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDA 88
Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
               D +  +++ +   G L  LVN A       A  +    F  VI+ +    FI C E
Sbjct: 89  ASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCRE 148
Query: 131 ALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
           ALK + K                  + +       Q + SA+K  + ++++S A E G  
Sbjct: 149 ALKVMSK--------SRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYE-GAL 199
Query: 191 YAIRVNGIAPGPIK 204
             IR N + PG I+
Sbjct: 200 RNIRFNSVTPGFIE 213

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 20/196 (10%)
Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA------LHSLGIPAIGLE 67
           V ++TG   GIG  I+L LGK G  + +        RSA AA      + + G  AI   
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLV-----NYARSAKAAEEVSKQIEAYGGQAITFG 57
Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           GDV K  D   ++++ I+ +G +D++VN A          +  + +  VI+++  G F+ 
Sbjct: 58  GDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLC 117
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
              A K + K                  + +       Q + +AAKA V   +++ A E 
Sbjct: 118 TQAATKIMMK--------KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAARE- 168
Query: 188 GTDYAIRVNGIAPGPI 203
           G    I VN + PG I
Sbjct: 169 GASRNINVNVVCPGFI 184

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 10/195 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
           + GKVA++TG  SGIG  I+    K GA I ++ R+   L  A  +L    G+  + +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV   E    VVES  + FG  DILVN A         + +   ++   E+  +      
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVM------ 118
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A   L +                  +       WY+   +  KAA+   +++LA E  
Sbjct: 119 --AAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176
Query: 189 TDYAIRVNGIAPGPI 203
            D  IRVN I PG I
Sbjct: 177 KDN-IRVNCINPGLI 190

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
           L GKVA++TGG  GIG  I+ +  + GA + I GR   V   A     S+G P      +
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA---KSVGTPDQIQFFQ 60
Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            D    +   ++ ++T   FG +  LVN A        E+ +   +R ++ ++  G F  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
               ++ +K                       +         +A+K AV  +++S AL+ 
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEG-------FVGDPSLGAYNASKGAVRIMSKSAALDC 173
Query: 188 G-TDYAIRVNGIAPGPIK 204
              DY +RVN + PG IK
Sbjct: 174 ALKDYDVRVNTVHPGYIK 191

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 13/199 (6%)
Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGL 66
           +LKGK A++TG  SGIG  ++ +L K GA + I   G+ + + R         G+ A  L
Sbjct: 1   MLKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYL 60
Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
             D+   +     +       G LDILVN A      P E+   + +  +I ++    F 
Sbjct: 61  NADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFH 120
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLAL 185
               AL  ++K                  A+ H   A+  +    AAK  V  +T+  AL
Sbjct: 121 GTAAALPIMQK---------QGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTAL 171
Query: 186 EWGTDYAIRVNGIAPGPIK 204
           E      I  N I PG ++
Sbjct: 172 E-NAGKGITCNAICPGWVR 189

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M  PF    L G+ A++TG GSGIG  I+    + GA +   GR   V +     +   G
Sbjct: 23  MTGPFS---LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGG 78
Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
             A  +  D+   E A  V E  +    ++D+LVN A      PAE++S   +R V+ ++
Sbjct: 79  GSAEAVVADLADLEGAANVAEE-LAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVN 137
Query: 121 ---------SVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSA 171
                    S GT ++ H + + +                    + L +         +A
Sbjct: 138 LDAAWVLSRSFGTAMLAHGSGRIVT-----------------IASMLSFQGGRNVAAYAA 180
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 219
           +K AV  +TR+LA EW     + VN +APG +  TA  + L  ++ R+
Sbjct: 181 SKHAVVGLTRALASEW-AGRGVGVNALAPGYVV-TANTAALRADDERA 226

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 13/196 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG   GIG  I+ +L   GA + +          A AA  S+G  A  +  D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIV---SDINAEGAKAAAASIGKKARAIAAD 60
Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +     +V+ + + I    G +DILVN A+    V  +D+  + +R +I+++  GTFI+ 
Sbjct: 61  ISD-PGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
                 ++                   +   +  T       AAK  V   TR+LA E G
Sbjct: 120 RAGTDQMR-------AAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELG 172
Query: 189 TDYAIRVNGIAPGPIK 204
             Y I  N + PG I+
Sbjct: 173 -KYNITANAVTPGLIE 187

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 19/227 (8%)
Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG-DVRK 72
           AL+TG   GIG  I+L+L + G A+AI  G+ +             G P + + G ++ +
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 73  REDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
            E A  +V       G LD LVN A       LV  +D     +  V+E +    F    
Sbjct: 64  AEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKD---EDWEAVLEANLSAVFRTTR 120
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           EA+K + K                  + +       Q +  A+KA +   TR++A E+  
Sbjct: 121 EAVKLMMK--------ARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEY-A 171
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
              I VN +APG I+    +++  P+E++      + A +FG   ++
Sbjct: 172 QRGITVNAVAPGFIETE--MTERLPQEVKEAYLKQIPAGRFGRPEEV 216

>pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 87/212 (41%), Gaps = 32/212 (15%)
Query: 9   ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
            LKGK  L+ G      I + I+      GA +A     +++ +        L  P +  
Sbjct: 3   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYV-Y 61
Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEI 119
           E DV K E    +  S     G LD +V++ A     P E L       S + F T +EI
Sbjct: 62  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVA---FAPKEALEGSLLETSKSAFNTAMEI 118
Query: 120 DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYT-ATWYQIHVSA---AKAA 175
            SV + I     LK L                     TL Y  +T Y  H +    AKAA
Sbjct: 119 -SVYSLIELTNTLKPL-------------LNNGASVLTLSYLGSTKYMAHYNVMGLAKAA 164
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
           ++S  R LA++ G  + IRVN ++ GPI+  A
Sbjct: 165 LESAVRYLAVDLGKHH-IRVNALSAGPIRTLA 195

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
          + G+V ++TG   GIG  I+LQL K GA + I GR    LR       SLG   + +  D
Sbjct: 3  MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62
Query: 70 VRKREDAVRVVESTIN--HFGKLDILVNAA 97
             +E  VR +   ++    G+LD+LVN A
Sbjct: 63 -SSQESEVRSLFEQVDREQQGRLDVLVNNA 91

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 26/235 (11%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI 64
            K D+L  ++ L+TG   GIG E ++   ++GA + ++GR +  LR   + ++       
Sbjct: 3   LKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE----ET 58
Query: 65  GLEGD-------VRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTV 116
           G +             E+  ++ +  + ++ +LD +L NA     + P  + +P  ++ V
Sbjct: 59  GRQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV 118
Query: 117 IEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAV 176
           ++I+   TF++    L  L K                  A     A        A+K A 
Sbjct: 119 MQINVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA--------ASKFAT 170
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAY 228
           + + + LA E+     +RVN I PG  +     S      P+++++ A D M  Y
Sbjct: 171 EGMMQVLADEY--QQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA-DIMPLY 222

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
           L+GK   ++GG  GIG  I+ ++   GA +A++ +           + +A   +   G  
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
           A+ + GD+R  +     V  T+  FG +DI VN A+   L   E++    F  +  I   
Sbjct: 67  ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126
Query: 123 GTFIMCHEALKYLK 136
           GT+ +    + ++K
Sbjct: 127 GTYAVSQSCIPHMK 140

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 24/238 (10%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI---PAIG- 65
           L+  +AL+TG GSGIG  +S++L   GA +A     +   +  V  L   G    P  G 
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64
Query: 66  ---LEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIE 118
               + DV +   A  ++E     F +   +V + AG     FL+    +S + +  VI 
Sbjct: 65  HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLL---HMSEDDWDKVIA 121
Query: 119 IDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDS 178
           ++  GTF++   A + L                    + +       Q + +A+KA V  
Sbjct: 122 VNLKGTFLVTQAAAQAL-------VSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIG 174
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           +T++ A E G  + IR N + PG I     +++  P+++  K T+ +     G+  D+
Sbjct: 175 LTQTAARELGR-HGIRCNSVLPGFIATP--MTQKVPQKVVDKITEMIPMGHLGDPEDV 229

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGD 69
           G+ A +TGG +G+G  +  QL   G  +AI   R+  +  A+A L +   G   +G++ D
Sbjct: 8   GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLD 67
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 109
           V  RE      +     FG + IL N A  N   P E+ S
Sbjct: 68  VASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESS 107

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG----IPAIG 65
           L G++AL+TGG  GIG  I+  L + GA + I  R           L + G    IPA  
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPA-- 84
Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
              D+     A R+ ++      +LDILVN A  ++    E    +G+  V++++    F
Sbjct: 85  ---DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVF 141
Query: 126 IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV-SAAKAAVDSITRSLA 184
               + L  L++                  +    +A   Q +    +KAA+  ++R LA
Sbjct: 142 SCIQQLLPLLRR----SASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLA 197
Query: 185 LEWGTDYAIRVNGIAPG 201
            E   ++ I VN IAPG
Sbjct: 198 KELVGEH-INVNVIAPG 213

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 13/196 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG   GIG  I+ +L   GA + +          A AA  S+G  A  +  D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIV---SDINAEGAKAAAASIGKKARAIAAD 60
Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +     +V+ + + I    G +DILVN A+    V  +D+  + +R +I+++  GTFI+ 
Sbjct: 61  ISD-PGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
                  +                   +   +  T       AAK  V   TR+LA E G
Sbjct: 120 RAGTDQXR-------AAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELG 172
Query: 189 TDYAIRVNGIAPGPIK 204
             Y I  N + PG I+
Sbjct: 173 -KYNITANAVTPGLIE 187

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 6   KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA---VAALHSLGIP 62
           K D+L+ ++ L+TG   GIG E +L   ++GA + ++GR +  LR     +A    +   
Sbjct: 9   KQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQ 68
Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 121
              L+      E+  +V +    H+ +LD +L NA     + P  +  P  ++ V +++ 
Sbjct: 69  WFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNV 128
Query: 122 VGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITR 181
             TF +    L  L K                  A     AT        +K A +   +
Sbjct: 129 NATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAT--------SKFATEGXXQ 180
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216
            LA E+  + ++RVN I PG  + +   S    E+
Sbjct: 181 VLADEY-QNRSLRVNCINPGGTRTSXRASAFPTED 214

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG  SGIG   +  L   GAA+AI  RR   LR+    L + G     LE D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  R+     V ST+   G LDILVN A    L P ED     +   I+ + +G      
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXYXTR 124
Query: 130 EALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            AL +L +                      Y AT +          V++ + +L  E  T
Sbjct: 125 AALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKF---------GVNAFSETLRQEV-T 174
Query: 190 DYAIRVNGIAPG 201
           +  +RV  I PG
Sbjct: 175 ERGVRVVVIEPG 186

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 26/234 (11%)
Query: 6   KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIG 65
           K D+L  ++ L+TG   GIG E ++   ++GA + ++GR +  LR   + ++       G
Sbjct: 8   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE----ETG 63
Query: 66  LEGD-------VRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVI 117
            +             ED  ++ +    ++ +LD +L NA     + P  +  P  ++ V+
Sbjct: 64  RQPQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVM 123
Query: 118 EIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVD 177
           +++   TF++    L  L K                  A     A        A+K A +
Sbjct: 124 QVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA--------ASKFATE 175
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAY 228
            + + LA E+     +RVN I PG  +     S      P+++++ A D M  Y
Sbjct: 176 GMMQVLADEY--QQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA-DIMPLY 226

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
           L GKVA++TGG  GIG  I+ +  + GA + I  R   V   A     S+G P      +
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAA---KSVGTPDQIQFFQ 60
Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            D    +   ++ ++T   FG +  LVN A        E+ +   +R ++ ++  G F  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
               ++ +K                       +         +A+K AV  +++S AL+ 
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEG-------FVGDPSLGAYNASKGAVRIMSKSAALDC 173
Query: 188 G-TDYAIRVNGIAPGPIK 204
              DY +RVN + PG IK
Sbjct: 174 ALKDYDVRVNTVHPGYIK 191

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKR 73
           AL+T G  G+G +++ +L   G ++ +     T  + +       +      ++ DV K+
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 74  EDAVRVVESTINHFGKLDILVNAAAGNFLVPAE---DLSPNGFRTVIEIDSVGTFIMCHE 130
           ED  ++VE  ++HFGK+D L+N  AG ++   +   D   + +  +I+ +    F +   
Sbjct: 70  EDLHKIVEEAMSHFGKIDFLIN-NAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKL 128
Query: 131 ALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
            +  ++K                    ++ +A       +AAK  + S+T+++A E   +
Sbjct: 129 VVPVMRKQNFGRIINYGFQGADSAPGWIYRSA------FAAAKVGLVSLTKTVAYEEA-E 181
Query: 191 YAIRVNGIAPGPI 203
           Y I  N + PG I
Sbjct: 182 YGITANMVCPGDI 194

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMG----RRKTVLRSAVAALHS---LGIPAIG 65
           K A++TG  SGIG  I+  L K GA I + G         +   VA L S   L  PA  
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPA-- 83
Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
              D  K  +         + FG  DILVN A   F+   ED     +  +I ++   +F
Sbjct: 84  ---DXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSF 140
Query: 126 IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLA 184
                A+   KK                  A+ H   A+ ++    AAK  +  +T+++A
Sbjct: 141 HTIRGAIPPXKK---------KGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVA 191
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 220
           LE   +  + VN I PG +  T  V K  P++ R++
Sbjct: 192 LEVA-ESGVTVNSICPGYVL-TPLVEKQIPDQARTR 225

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 20/230 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG   GIG  I+  L + GA   ++G   T    A A    LG    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGA--KVIG-TATSESGAQAISDYLGDNGKGMALN 66
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V   E    V+++  + FG +DILVN AA    N L+    +    +  ++E +    F 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLM---RMKEEEWSDIMETNLTSIFR 123
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +    L+ + K                  A         Q + +AAKA V   T+S+A E
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAG--------QANYAAAKAGVIGFTKSMARE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
             +   + VN +APG I+    ++K   +E R+     + A + G+  +I
Sbjct: 176 VAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPREI 222

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 26/234 (11%)
Query: 6   KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIG 65
           K D+L  ++ L+TG   GIG E ++   ++GA + ++GR +  LR   + ++       G
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE----ETG 61
Query: 66  LEGD-------VRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVI 117
            +             E+  ++ +    ++ +LD +L NA     + P  + +P  ++ V+
Sbjct: 62  RQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVM 121
Query: 118 EIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVD 177
           +++   TF++    L  L K                  A     A        A+K A +
Sbjct: 122 QVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA--------ASKFATE 173
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAY 228
            + + LA E+     +RVN I PG  +     S      P+++++ A D M  Y
Sbjct: 174 GMMQVLADEY--QQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA-DIMPLY 224

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 86/216 (39%), Gaps = 16/216 (7%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEG 68
           L  +  L+TGG  GIG  I+    + GA +A+  R    L S  A L  LG    IG+  
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED-LSPNGFRTVIEIDSVGTFIM 127
           DV           + ++ FG LD+ V A AG F     D ++P     V++++  GT   
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDV-VCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYT 157
Query: 128 CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQ--IHVSAAKAAVDSITRSLAL 185
               L  L                    +++    T Y    H  A+KAA     R+ A+
Sbjct: 158 VQACLAPLTA---------SGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAI 208
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 221
           E      + VN I PG I  T G+  +  E I   A
Sbjct: 209 EL-APRGVTVNAILPGNIL-TEGLVDMGEEYISGMA 242

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 20/230 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG   GIG  I+  L + GA   ++G   T    A A    LG    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGA--KVIG-TATSESGAQAISDYLGDNGKGMALN 66
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V   E    V+++  + FG +DILVN A     N L+  ++     +  ++E +    F 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE---WSDIMETNLTSIFR 123
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +    L+ + K                  + +       Q + +AAKA V   T+S+A E
Sbjct: 124 LSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMARE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
             +   + VN +APG I+    ++K   +E R+     + A + G+  +I
Sbjct: 176 VAS-RGVTVNTVAPGAIETD--MTKALNDEQRTATLAQVPAGRLGDPREI 222

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 15/213 (7%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           +VA++TG  SG G  I+ +    G  +A +    +T+  +A    H+     + +  DV 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 72  KREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSP-NGFRTVIEIDSVGTFIMC 128
              D    + +T+  FG +D+LVN A   GN        +P   F  V+ ++  G F+ C
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 129 HEALKY-LKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
              L + L +                      YT +         K AV  +T+S+A+++
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTS---------KGAVLQLTKSVAVDY 173
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 220
                IR N + PG I+      +L   E+R +
Sbjct: 174 AGS-GIRCNAVCPGMIETPMTQWRLDQPELRDQ 205

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M   F+ ++L+GK  ++TG   GIG EI+  L K GA + +  R K  L+  VA    LG
Sbjct: 21  MNEKFRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELG 80
Query: 61  -IPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94
              A  + G +     A   V    N  G LD+L+
Sbjct: 81  AASAHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLI 115

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 11/209 (5%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           L  ++AL+TG   GIG  I+L+L   GA +A+            VAA+ + G  A  ++ 
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV +  +   +  + I  +G+LD+LVN A          +  + +++V++++  G F+  
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCS 145
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A K + K                  + +       Q + SAAKA V  +T+++A E  
Sbjct: 146 RAAAKIMLK--------QRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELA 197
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEI 217
           +   I VN +APG I  T   S+LA E++
Sbjct: 198 S-RGITVNAVAPGFIA-TDMTSELAAEKL 224

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 13/209 (6%)
Query: 2   ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM----------GRRKTVLRS 51
           + P    ++ G+V ++TG G GIG   +L     GA + +               +  +S
Sbjct: 17  QGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQS 76
Query: 52  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 111
            V  + + G  A+    +V   + A  ++++ +  FG LD+LVN A         + S  
Sbjct: 77  VVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEE 136
Query: 112 GFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSA 171
            F  VI +   G F     A  Y +                   A L  +    Q + SA
Sbjct: 137 EFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVG--QGNYSA 194
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAP 200
           AKA + ++T   A E G  Y + VN IAP
Sbjct: 195 AKAGIATLTLVGAAEMGR-YGVTVNAIAP 222

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 23/225 (10%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KV ++TG   GIG    L          ++   +++  SA   +H++        GD+ K
Sbjct: 29  KVVVITGASQGIG--AGLVRAYRDRNYRVVATSRSIKPSADPDIHTVA-------GDISK 79
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF-IMCHEA 131
            E A R+V   I  FG++D LVN A      P  + +   +   + ++  G F I    A
Sbjct: 80  PETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAA 139
Query: 132 LKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
            + LK+                        A       S  K  ++++TRSLA E+ +  
Sbjct: 140 AEXLKQGSGHIVSITTSLVDQPXVGXPSALA-------SLTKGGLNAVTRSLAXEF-SRS 191
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
            +RVN ++PG IK     +   P E  S         + GE  D+
Sbjct: 192 GVRVNAVSPGVIK-----TPXHPAETHSTLAGLHPVGRXGEIRDV 231

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 75/199 (37%), Gaps = 14/199 (7%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-------SLGIPAIG 65
           K  ++TGG  GIG   +       A  A       + RSA  A+          G+    
Sbjct: 15  KTIIVTGGNRGIGLAFTR------AVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKA 68
Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
            + DV   +   + ++      G +  L+  A  + + PA +L+   F  V +++  G F
Sbjct: 69  YQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVF 128
Query: 126 IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
             C    K   +                         +  Q+  +++KAA  ++ + LA 
Sbjct: 129 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 188
Query: 186 EWGTDYAIRVNGIAPGPIK 204
           EW +   IRVN ++PG + 
Sbjct: 189 EWAS-AGIRVNALSPGYVN 206

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 20/230 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG   GIG  I+  L + GA   ++G   T    A A    LG    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGA--KVIG-TATSESGAQAISDYLGDNGKGMALN 66
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V   E    V+++  + FG +DILVN A     N L+  ++     +  ++E +    F 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE---WSDIMETNLTSIFR 123
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +    L+ + K                  + +       Q + +AAKA V   T+S+A E
Sbjct: 124 LSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMARE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
             +   + VN +APG I+    ++K   +E R+     + A + G+  +I
Sbjct: 176 VAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPREI 222

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTV---------LRSAVAALH 57
           L+GKVA +TG   G G   +++L + GA   AI +  ++  +         L+  V  + 
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
             G   I  + DVR       VV+  +  FG +DILV+    +       L+   +  ++
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDIL 163
Query: 118 EIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVD 177
           + + +G +  C   L  + +                  +T+       Q H +A+K  V 
Sbjct: 164 QTNLIGAWHACRAVLPSMIE-------RGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIK 204
            +  SLA E G  + IRVN + PG + 
Sbjct: 217 GLMLSLANEVGR-HNIRVNSVNPGAVN 242

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 9  ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL-E 67
          + K + A++TGG  GIGFEI  QL  +G  + +  R  T    AV  L +     +   +
Sbjct: 9  VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68
Query: 68 GDVRKREDAVRVVESTIN----HFGKLDILVNAA 97
           DV    D +  + S  +    HFGKLDILVN A
Sbjct: 69 LDVT---DPIATMSSLADFIKTHFGKLDILVNNA 99

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KVA++TGG SGIG  +   L ++GA +  +   +   +S V       I       DV  
Sbjct: 15  KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDE---KSDVNVSDHFKI-------DVTN 64
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
            E+    VE T   +G++DILVN A      P        +R +I+++  G+++M    +
Sbjct: 65  EEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTI 124
Query: 133 KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
             +                    +   Y AT        +K A+  +TRS+A+++     
Sbjct: 125 PVM--------LAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPK-- 174
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
           IR N + PG I  T  V K A  E+     D  A  +  E+W
Sbjct: 175 IRCNAVCPGTIM-TPMVIKAAKMEV---GEDENAVERKIEEW 212

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 20/230 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG   GIG  I+  L + GA   ++G   T    A A    LG    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGA--KVIG-TATSESGAQAISDYLGDNGKGMALN 66
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V   E    V+++  + FG +DILVN A     N L+  ++     +  ++E +    F 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE---WSDIMETNLTSIFR 123
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +    L+ + K                  + +       Q + +AAKA V   T+S+A E
Sbjct: 124 LSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMARE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
             +   + VN +APG I+    ++K   +E R+     + A + G+  +I
Sbjct: 176 VAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPREI 222

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 5  FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
          F+ ++L+GK  ++TG   GIG EI+  L K GA + +  R K  L+  VA    LG   A
Sbjct: 4  FRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASA 63
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILV 94
            + G +     A   V    N  G LD+L+
Sbjct: 64 HYIAGSMEDMTFAEEFVAEAGNLMGGLDMLI 94

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 5  FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
          F+ ++L+GK  ++TG   GIG EI+  L K GA + +  R K  L+  VA    LG   A
Sbjct: 4  FRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASA 63
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILV 94
            + G +     A   V    N  G LD+L+
Sbjct: 64 HYIAGSMEDMTFAEEFVAEAGNLMGGLDMLI 94

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
          ++GK+A++T G SG+GF  +L+L ++GA + +  R +  L +A + + SL  G     + 
Sbjct: 5  IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAG 99
          GD+R+  D  R+ E      G  DILV +  G
Sbjct: 65 GDIREPGDIDRLFEKA-RDLGGADILVYSTGG 95

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKG+  L+TGG SG+G  +  +    GA +A++ +    L + +   H  G   +G+ GD
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERL-AELETDH--GDNVLGIVGD 59
Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFL-----VPAEDLSPNGFRTVIEIDSVG 123
           VR  ED  +     +  FGK+D L+ NA   ++      +P E L    F  V  I+  G
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDA-AFDEVFHINVKG 118
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
                   L  L                        YT         AAK A+  + R L
Sbjct: 119 YIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYT---------AAKHAIVGLVREL 169
Query: 184 ALEWGTDYAIRVNGIAPGPIK-DTAGVSKL 212
           A E      +RVNG+  G I  D  G S L
Sbjct: 170 AFELAP--YVRVNGVGSGGINSDLRGPSSL 197

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 5  FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
          F+ ++L+GK  ++TG   GIG EI+  L K GA + +  R K  L+  VA    LG   A
Sbjct: 2  FRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASA 61
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILV 94
            + G +     A   V    N  G LD+L+
Sbjct: 62 HYIAGSMEDMTFAEEFVAEAGNLMGGLDMLI 92

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 20/230 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG   GIG  I+  L + GA   ++G   T    A A    LG    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGA--KVIG-TATSESGAQAISDYLGDNGKGMALN 66
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V   E    V+++  + FG +DILVN A     N L+    +    +  ++E +    F 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLM---RMKEEEWSDIMETNLTSIFR 123
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +    L+ + K                  + +       Q + +AAKA V   T+S+A E
Sbjct: 124 LSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMARE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
             +   + VN +APG I+    ++K   +E R+     + A + G+  +I
Sbjct: 176 VAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPREI 222

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KV L+TG   GIG  I+ +LG  GA I +  RR+  + +    +   G  A+    DV  
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD 64
Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           R       ++ ++ +G++D+LVN A    L P   +  + +  +I+++  G  
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVL 117

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI------MGRRKTVLRSAVAALHSLGIPA 63
           L GKVAL++GG  G+G      +   GA +         G+      +  A    L    
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHL---- 60
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
                DV +       V++ +  FG L +LVN A    +   ED +   ++ +++++  G
Sbjct: 61  -----DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTG 115
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRS 182
            F+     +K +K+                     H YTAT         K AV  +T+S
Sbjct: 116 VFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTAT---------KFAVRGLTKS 166
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 221
            ALE G    IRVN I PG +K    ++   PE+I   A
Sbjct: 167 TALELGPS-GIRVNSIHPGLVKTP--MTDWVPEDIFQTA 202

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK  ++TGG  G+G E + Q    GA + +      +     A    LG  A     D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLA---DVLDEEGAATARELGDAARYQHLD 59
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V   ED  RVV      FG +D LVN A    G FL   E  S   FR V+EI+  G FI
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL---ETESVERFRKVVEINLTGVFI 116
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
                +  +K                     L  T+++      A+K  V  +++  A+E
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMG---LALTSSY-----GASKWGVRGLSKLAAVE 168
Query: 187 WGTDYAIRVNGIAPG 201
            GTD  IRVN + PG
Sbjct: 169 LGTDR-IRVNSVHPG 182

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK  ++TGG  G+G E + Q    GA + +      +     A    LG  A     D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLA---DVLDEEGAATARELGDAARYQHLD 59
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V   ED  RVV      FG +D LVN A    G FL   E  S   FR V+EI+  G FI
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL---ETESVERFRKVVEINLTGVFI 116
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
                +  +K                     L  T+++      A+K  V  +++  A+E
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMG---LALTSSY-----GASKWGVRGLSKLAAVE 168
Query: 187 WGTDYAIRVNGIAPG 201
            GTD  IRVN + PG
Sbjct: 169 LGTDR-IRVNSVHPG 182

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 13/199 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L   VA++TGG SGIG      L + GAA+A   R    LR+A +AL     P   L   
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR-FPGARLFAS 64
Query: 70  VRKREDAVRV---VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V    DA++V    E+     G   ILVN A    +    + +   +   +++     F 
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLK---FFS 121
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           + H    +L +                  + L      + +  SAA+A V ++ RS+A E
Sbjct: 122 VIHPVRAFLPQ-----LESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFE 176
Query: 187 WGTDYAIRVNGIAPGPIKD 205
           +     +RVNGI  G ++ 
Sbjct: 177 FAPK-GVRVNGILIGLVES 194

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
           L+G+VA +TG   G G   +++L   GA   A  I       +  A A+   L   A  +
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 67  EGDVRK--------REDAV--RVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
           E   RK        R+DA    +V   +  FG+LD++V  A         +L+   + TV
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV 132
Query: 117 IEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAV 176
           I ++  GT+       + L+                   ++    AT    H SA+K  +
Sbjct: 133 IGVNLTGTW-------RTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGL 185
Query: 177 DSITRSLALEWGTDYAIRVNGIAP 200
            ++T +LA+E G +Y IRVN I P
Sbjct: 186 TALTNTLAIELG-EYGIRVNSIHP 208

>pdb|3F4B|A Chain A, Crystal Structure Of Plasmodium Berghei Enoyl-Acyl-Carrier- Protein Reductase With Triclosan Length = 323

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 85  NHFGKLDILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXX 142
           N +GK+ +LV++ A    V     D S +G+   I   S     +C    K++       
Sbjct: 116 NKYGKISMLVHSLANGREVQKSLLDTSRDGYLDAISKSSYSLISLCKHFCKFMN------ 169
Query: 143 XXXXXXXXXXXXXATLHYTATW-----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 197
                         +L Y A+      Y   +S+AKAA++S TR LA   G  Y IR+N 
Sbjct: 170 --------SGGSVVSLTYQASQKVVPGYGGGMSSAKAALESDTRVLAYYLGRKYNIRINT 221
Query: 198 IAPGPIKDTAGVS 210
           I+ GP+K  A  +
Sbjct: 222 ISAGPLKSRAATA 234

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM---GRRKTVLRSAVAA-- 55
           M SP + D   G+V L+TG G+G+G   +L   + GA + +    G  K V + ++AA  
Sbjct: 22  MGSPLRFD---GRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADK 78
Query: 56  ----LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 111
               +   G  A+     V   E+  +VV++ ++ FG++D++VN A          +S  
Sbjct: 79  VVEEIRRRGGKAVANYDSV---EEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDE 135
Query: 112 GFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSA 171
            +  +  +   G+F +   A +++KK                  A+  Y   + Q + SA
Sbjct: 136 DWDIIHRVHLRGSFQVTRAAWEHMKK-------QKYGRIIMTSSASGIY-GNFGQANYSA 187
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAP 200
           AK  +  +  SLA+E G    I  N IAP
Sbjct: 188 AKLGLLGLANSLAIE-GRKSNIHCNTIAP 215

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------------LRSAVAALH 57
           ++ KV L+TGG  G G   +++L + GA I +      +            L  A   + 
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
             G  A   E DVR R    R + + +  FGKLD++V A AG   + A  L    F    
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVV-ANAGICPLGAH-LPVQAFADAF 125
Query: 118 EIDSVGTFIMCHEALKYL 135
           ++D VG     H AL YL
Sbjct: 126 DVDFVGVINTVHAALPYL 143

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 21/198 (10%)
Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIM---------GRRKTVLRSAVAALHSLGIP 62
           G+VA++TG G+G+G E +L   + GA + +          G  +      V  +   G  
Sbjct: 19  GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE 78
Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
           A+    D     D  +V+E+ I  FG++DILVN A           S   +  V ++   
Sbjct: 79  AV---ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLK 135
Query: 123 GTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRS 182
           G+F     A  Y+KK                  +       + Q++ +AAK  +  +  +
Sbjct: 136 GSFKCTQAAFPYMKK--------QNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANT 187
Query: 183 LALEWGTDYAIRVNGIAP 200
           +A+E G    +  N I P
Sbjct: 188 VAIE-GARNNVLCNVIVP 204

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 14/211 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GK+A++TG  SGIG   +L   + GA + +  R    L      +   G  A  L GD
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 70  VRKREDAVRVVESTINHFGKLDI-LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V        +VE  +  FG LD    NA A   +     LS  G+R  ++ +    F+  
Sbjct: 66  VGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAA 125
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIH-VSAAKAAVDSITRSLALEW 187
                   K                  + + +TA +  +   +A+KA +  + ++LA+E 
Sbjct: 126 --------KYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVEL 177
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL---APE 215
           G    IRVN + PG     A  + L   APE
Sbjct: 178 GA-RGIRVNALLPGGTDTPANFANLPGAAPE 207

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 14/215 (6%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           ++  VA++TGG SG+G   + +L   GA + ++  R   +      +  LG  A     D
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV------VADLGDRARFAAAD 60
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA-GNFL-VPAED--LSPNGFRTVIEIDSVGTF 125
           V   E AV          G L I+VN A  GN + V + D   S   FR +++I+ VG+F
Sbjct: 61  VTD-EAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119
Query: 126 IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            +   A + + K                  +   +     Q   SA+K  V  +T  +A 
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 220
           +  + + IRV  IAPG + DT  ++ L PEE R+ 
Sbjct: 180 DLAS-HRIRVMTIAPG-LFDTPLLASL-PEEARAS 211

>pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
           +S+AKAA++S TR+LA E G  Y +RVN I+ GP+K  A
Sbjct: 193 MSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRA 231

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGK AL+TG  SGIG  I+  L + GA I + G        A+A +   G+ A+    D
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPAD 59
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +        +       FG +DILVN A    + P E      +  +I ++    F
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVF 115

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 13/154 (8%)
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV +       V++ +  FG L +LVN A    +   ED +   ++ +++++  G F+  
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLALEW 187
              +K  K+                     H YTAT         K AV  +T+S ALE 
Sbjct: 121 RAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTAT---------KFAVRGLTKSTALEL 171
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 221
           G    IRVN I PG +K     +   PE+I   A
Sbjct: 172 GPS-GIRVNSIHPGLVKTPX--TDWVPEDIFQTA 202

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 94/227 (41%), Gaps = 29/227 (12%)
Query: 8   DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP----- 62
           ++LKG+V L+TG   GIG   +     HGA++ ++GR +  L      + S G P     
Sbjct: 10  ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLII 69
Query: 63  AIGLEGDVRK--REDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
           A+ LE    +  RE A RV     + FG+LD +L NA+      P E L    F  V  +
Sbjct: 70  ALNLENATAQQYRELAARVE----HEFGRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHV 125
Query: 120 DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSI 179
           +   TF +    L  LK+                        A W    VS  K A + +
Sbjct: 126 NVNATFXLTRALLPLLKRSEDASIAFTSSSVGRKGR------ANWGAYGVS--KFATEGL 177
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEI 217
            ++LA E     A+R N I PG  +         D   ++  APE+I
Sbjct: 178 XQTLADELEGVTAVRANSINPGATRTGXRAQAYPDENPLNNPAPEDI 224

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 7/201 (3%)
Query: 4   PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA 63
           P    + + + A +TG  SGIG  ++  L   G A+    R    + +AV  L + G   
Sbjct: 16  PRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDV 75
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
            G   DV   ++    V + +  FG + ILVN+A  N      DL    +  V++ +  G
Sbjct: 76  DGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTG 135
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
            F +  E L+                      +T       Y    +A+K  V   T+S+
Sbjct: 136 VFRVTREVLR------AGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSV 189
Query: 184 ALEWGTDYAIRVNGIAPGPIK 204
             E      I VN + PG ++
Sbjct: 190 GFEL-AKTGITVNAVCPGYVE 209

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
           F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG   A
Sbjct: 27  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 86
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + G +     A + V       G LD+L+     N  +       +  R  +E++ + 
Sbjct: 87  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 146
Query: 124 TFIMCHEALKYLKK 137
             ++   AL  LK+
Sbjct: 147 YVVLTVAALPMLKQ 160

>pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
           S+AKAA++S TR+LA E G  Y +RVN I+ GP+K  A
Sbjct: 194 SSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRA 231

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           +   F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG
Sbjct: 3   LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 62
Query: 61  -IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
              A  + G +     A + V       G LD+L+     N  +       +  R  +E+
Sbjct: 63  AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 122
Query: 120 DSVGTFIMCHEALKYLKK 137
           + +   ++   AL  LK+
Sbjct: 123 NFLSYVVLTVAALPMLKQ 140

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           +   F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG
Sbjct: 4   LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 63
Query: 61  -IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
              A  + G +     A + V       G LD+L+     N  +       +  R  +E+
Sbjct: 64  AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 123
Query: 120 DSVGTFIMCHEALKYLKK 137
           + +   ++   AL  LK+
Sbjct: 124 NFLSYVVLTVAALPMLKQ 141

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 6   KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIG 65
           K D+L  ++ L+TG   GIG E +    ++GA + ++GR +  LR   + ++       G
Sbjct: 27  KQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINE----ETG 82
Query: 66  LEGD-------VRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVI 117
            +             E+  ++ +  + ++ +LD +L NA     + P  + +P  ++ V 
Sbjct: 83  RQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVX 142
Query: 118 EIDSVGTF 125
           +I+   TF
Sbjct: 143 QINVNATF 150

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           +   F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG
Sbjct: 17  LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 76
Query: 61  -IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
              A  + G +     A + V       G LD+L+     N  +       +  R  +E+
Sbjct: 77  AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 136
Query: 120 DSVGTFIMCHEALKYLKK 137
           + +   ++   AL  LK+
Sbjct: 137 NFLSYVVLTVAALPMLKQ 154

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
           F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG   A
Sbjct: 7   FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 66
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + G +     A + V       G LD+L+     N  +       +  R  +E++ + 
Sbjct: 67  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 126
Query: 124 TFIMCHEALKYLKK 137
             ++   AL  LK+
Sbjct: 127 YVVLTVAALPMLKQ 140

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            +GK+AL+TG   GIG  I+  L   GA   ++G   T    A A    LG    GL  +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGA--KVIG-TATSENGAQAISDYLGANGKGLMLN 59
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V        V+E     FG++DILVN A     N L+  +D   N    +IE +    F 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWN---DIIETNLSSVFR 116
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +    ++ + K                  + +       Q + +AAKA +   ++SLA E
Sbjct: 117 LSKAVMRAMMK--------KRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLARE 168
Query: 187 WGTDYAIRVNGIAPGPIK 204
             +   I VN +APG I+
Sbjct: 169 VAS-RGITVNVVAPGFIE 185

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 25/209 (11%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------------LRSAVAALH 57
           ++GKVA +TG   G G   ++ L + GA I  +   K +            L   V  + 
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI-LVNAAAGNFLVPAEDLSPNGFRTV 116
           +LG   I  + DVR  +     V+  +   G+LDI L NAA  +       + P  +R +
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM 145
Query: 117 IEIDSVGTFIMCHEALKYLK--KXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKA 174
           I+++  G +I    A+ ++   K                     +Y A+ + +H      
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLH------ 199
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPI 203
               + R++ALE G    IRVN + P  +
Sbjct: 200 ---GLMRTMALELGP-RNIRVNIVCPSSV 224

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
           F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG   A
Sbjct: 27  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 86
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + G +     A + V       G LD+L+     N  +       +  R  +E++ + 
Sbjct: 87  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 146
Query: 124 TFIMCHEALKYLKK 137
             ++   AL  LK+
Sbjct: 147 YVVLTVAALPMLKQ 160

>pdb|2O2Y|A Chain A, The Crystal Structure Of P. Falciparum Enoyl Acyl Carrier Protein Reductase Length = 349

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 210
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A  +
Sbjct: 198 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 239

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
           F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG   A
Sbjct: 17  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 76
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + G +     A + V       G LD+L+     N  +       +  R  +E++ + 
Sbjct: 77  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 136
Query: 124 TFIMCHEALKYLKK 137
             ++   AL  LK+
Sbjct: 137 YVVLTVAALPMLKQ 150

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 38/229 (16%)
Query: 16  LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA--IGLEGDVRKR 73
           L+TGG  GIG  I+ +L   G  +A+  R               G P    G+E DV   
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHR-------------GSGAPKGLFGVECDVTDS 65
Query: 74  EDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
           +   R   +   H G +++LV+ A   A  FL+    ++   F  VI  +  G F +   
Sbjct: 66  DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLM---RMTEEKFEKVINANLTGAFRVAQR 122
Query: 131 ALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW---YQIHVSAAKAAVDSITRSLALEW 187
           A + +++                       + +W    Q + +A+KA V  + RS+A E 
Sbjct: 123 ASRSMQRNKFGRMIFIG-----------SVSGSWGIGNQANYAASKAGVIGMARSIAREL 171
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
            +   +  N +APG I DT  +++   E I+  A  ++ A + G   ++
Sbjct: 172 -SKANVTANVVAPGYI-DT-DMTRALDERIQQGALQFIPAKRVGTPAEV 217

>pdb|2FOI|A Chain A, Synthesis, Biological Activity, And X-Ray Crystal Structural Analysis Of Diaryl Ether Inhibitors Of Malarial Enoyl Acp Reductase. Length = 269

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 210
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A  +
Sbjct: 185 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 226

>pdb|3AM3|A Chain A, A372m Mutant Of Enoyl-Acp Reductase From Plasmodium Falciparum (Pfenr) In Complex With Triclosan Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 210
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A  +
Sbjct: 186 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 227

>pdb|1UH5|A Chain A, Crystal Structure Of Enoyl-Acp Reductase With Triclosan At 2.2angstroms Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 210
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A  +
Sbjct: 186 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 227

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
           F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG   A
Sbjct: 2   FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 61
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + G +     A + V       G LD+L+     N  +       +  R  +E++ + 
Sbjct: 62  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 121
Query: 124 TFIMCHEALKYLKK 137
             ++   AL  LK+
Sbjct: 122 YVVLTVAALPMLKQ 135

>pdb|1VRW|A Chain A, Crystal Structure Analysis Of Plasmodium Falciparum Enoyl- Acyl-Carrier-Protein Reductase With Nadh Length = 336

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 210
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A  +
Sbjct: 185 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 226

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
           F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG   A
Sbjct: 10  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 69
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + G +     A + V       G LD+L+     N  +       +  R  +E++ + 
Sbjct: 70  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 129
Query: 124 TFIMCHEALKYLKK 137
             ++   AL  LK+
Sbjct: 130 YVVLTVAALPMLKQ 143

>pdb|2OL4|A Chain A, Crystal Structure Of Plasmodium Falciparum Enoyl Acp Reductase With Triclosan Reductase Length = 338

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 210
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A  +
Sbjct: 194 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 235

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            +GK+AL+TG   GIG  I+  L   GA   ++G   T    A A    LG    GL  +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGA--KVIG-TATSENGAQAISDYLGANGKGLMLN 59
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V        V+E     FG++DILVN A     N L+  +D   N    +IE +    F 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWN---DIIETNLSSVFR 116
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +    ++ + K                  + +       Q + +AAKA +   ++SLA E
Sbjct: 117 LSKAVMRAMMK--------KRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLARE 168
Query: 187 WGTDYAIRVNGIAPGPIK 204
             +   I VN +APG I+
Sbjct: 169 VAS-RGITVNVVAPGFIE 185

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
           F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG   A
Sbjct: 24  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 83
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + G +     A + V       G LD+L+     N  +       +  R  +E++ + 
Sbjct: 84  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 143
Query: 124 TFIMCHEALKYLKK 137
             ++   AL  LK+
Sbjct: 144 YVVLTVAALPMLKQ 157

>pdb|1NHG|A Chain A, Crystal Structure Analysis Of Plasmodium Falciparum Enoyl- Acyl-Carrier-Protein Reductase With Triclosan Length = 229

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 210
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A  +
Sbjct: 185 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 226

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
           F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG   A
Sbjct: 21  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 80
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
             + G +     A + V       G LD+L+     N  +       +  R  +E++ + 
Sbjct: 81  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 140
Query: 124 TFIMCHEALKYLKK 137
             ++   AL  LK+
Sbjct: 141 YVVLTVAALPMLKQ 154

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 20/230 (8%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG   GIG  I+  L + GA   ++G   T    A A    LG    G   +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGA--KVIG-TATSESGAQAISDYLGDNGKGXALN 63
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V   E    V+++  + FG +DILVN A     N L   ++     +  + E +    F 
Sbjct: 64  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEE---WSDIXETNLTSIFR 120
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +    L+   K                  + +       Q + +AAKA V   T+S A E
Sbjct: 121 LSKAVLRGXXK--------KRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXARE 172
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
             +   + VN +APG I+     +K   +E R+     + A + G+  +I
Sbjct: 173 VAS-RGVTVNTVAPGFIETDX--TKALNDEQRTATLAQVPAGRLGDPREI 219

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 83/200 (41%), Gaps = 27/200 (13%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            +GK+AL+TG   GIG  I+  L   GA   ++G   T    A A    LG    GL  +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGA--KVIG-TATSENGAQAISDYLGANGKGLMLN 59
Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           V        V+E     FG++DILVN A     N L+  +D   N    +IE +    F 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWN---DIIETNLSSVFR 116
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +    ++ + K                            Q + +AAKA +   ++SLA E
Sbjct: 117 LSKAVMRAMMKKRHG-----------------RIITIGGQANYAAAKAGLIGFSKSLARE 159
Query: 187 WGTDYAIRVNGIAPGPIKDT 206
             +   I VN +APG I+ +
Sbjct: 160 VAS-RGITVNVVAPGFIETS 178

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 79/202 (39%), Gaps = 22/202 (10%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE-G 68
           L G+  L+TG G GIG      L   GA +  + R +  L S V      GI  + ++ G
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR--ECPGIEPVCVDLG 62
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D    E A       +   G +D+LVN AA   L P  +++   F    E++      + 
Sbjct: 63  DWEATERA-------LGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLH--YTATWYQIHVSAAKAAVDSITRSLALE 186
               + L                     T H  Y +T         K A+D +T+ +ALE
Sbjct: 116 QIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST---------KGALDMLTKVMALE 166
Query: 187 WGTDYAIRVNGIAPGPIKDTAG 208
            G  + IRVN + P  +  + G
Sbjct: 167 LG-PHKIRVNAVNPTVVMTSMG 187

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIA-----IMGRRKTVLRSAVAALHSLGIPAIGLE 67
           K+ L+TG  SG G   +  L   G  +      I+GR  + + +         +    LE
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDNDVDLRTLE 65
Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            DV+ +    R ++  I   G++D+L++ A      PAE  +P  F  + +I+ + T  +
Sbjct: 66  LDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPEQFAELYDINVLSTQRV 125
Query: 128 CHEALKYLKK 137
              AL + ++
Sbjct: 126 NRAALPHXRR 135

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
           F+ ++L+GK  ++TG   GIG E++  L K GA + +  R +  L+  V+    LG   A
Sbjct: 2   FRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASA 61
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
             + G +     A + +       G LD+L+ N      L    D   +  R V+E++ +
Sbjct: 62  HYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHD-DIHSVRRVMEVNFL 120
Query: 123 GTFIMCHEALKYLKK 137
              +M   AL  LK+
Sbjct: 121 SYVVMSTAALPMLKQ 135

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 80/202 (39%), Gaps = 22/202 (10%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE-G 68
           L G+  L+TG G GIG      L   GA +  + R +  L S V      GI  + ++ G
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR--ECPGIEPVCVDLG 62
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D    E A       +   G +D+LVN AA   L P  +++   F    E++      + 
Sbjct: 63  DWEATERA-------LGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLH--YTATWYQIHVSAAKAAVDSITRSLALE 186
               + L                     T H  Y +T         K A+D +T+ +ALE
Sbjct: 116 QIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCST---------KGALDMLTKVMALE 166
Query: 187 WGTDYAIRVNGIAPGPIKDTAG 208
            G  + IRVN + P  +  + G
Sbjct: 167 LG-PHKIRVNAVNPTVVMTSMG 187

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 5   FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPA 63
           F+ ++L+GK  ++TG   GIG E++  L K GA + +  R +  L+  V+    LG   A
Sbjct: 11  FRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASA 70
Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
             + G +     A + +       G LD+L+ N      L    D   +  R V+E++ +
Sbjct: 71  HYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHD-DIHSVRRVMEVNFL 129
Query: 123 GTFIMCHEALKYLKK 137
              +M   AL  LK+
Sbjct: 130 SYVVMSTAALPMLKQ 144

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 23/208 (11%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------------LRSAVAALH 57
            +GK AL+TGG  G+G   ++ L + GA IAI  R +              L   VA + 
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
             G   I  + DV+ R      V    +  G +DI +  A  + +    ++    +  VI
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVI 127
Query: 118 EIDSVGTF-IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAV 176
             +  GTF  +   A   +K+                  + L ++A + Q    ++K  V
Sbjct: 128 GTNLTGTFNTIAAVAPGMIKR---------NYGRIVTVSSMLGHSANFAQASYVSSKWGV 178
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIK 204
             +T+  A +    Y I VN +APG I+
Sbjct: 179 IGLTKCAAHDL-VGYGITVNAVAPGNIE 205

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 38/229 (16%)
Query: 16  LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA--IGLEGDVRKR 73
           L+TGG  GIG  I+ +L   G  +A+  R               G P    G+E DV   
Sbjct: 39  LVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-------------GAPKGLFGVEVDVTDS 85
Query: 74  EDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
           +   R   +   H G +++LV+ A   A  FL+    ++   F  VI  +  G F +   
Sbjct: 86  DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLM---RMTEEKFEKVINANLTGAFRVAQR 142
Query: 131 ALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW---YQIHVSAAKAAVDSITRSLALEW 187
           A + +++                       +  W    Q + +A+KA V  + RS+A E 
Sbjct: 143 ASRSMQRNKFGRMIFIA-----------SVSGLWGIGNQANYAASKAGVIGMARSIAREL 191
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
            +   +  N +APG I DT  +++   E I+  A  ++ A + G   ++
Sbjct: 192 -SKANVTANVVAPGYI-DT-DMTRALDERIQQGALQFIPAKRVGTPAEV 237

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 6   KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIG 65
           K D+L  ++ L+TG   GIG E +    ++GA + ++GR +  LR   + ++       G
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINE----ETG 61
Query: 66  LEGD-------VRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVI 117
            +             E+  ++ +    ++ +LD +L NA     + P  + +P  ++ V 
Sbjct: 62  RQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVX 121
Query: 118 EIDSVGTF 125
           +++   TF
Sbjct: 122 QVNVNATF 129

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 38/229 (16%)
Query: 16  LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA--IGLEGDVRKR 73
           L+TGG  GIG  I+ +L   G  +A+  R               G P    G+E DV   
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHR-------------GSGAPKGLFGVEVDVTDS 65
Query: 74  EDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
           +   R   +   H G +++LV+ A   A  FL+    ++   F  VI  +  G F +   
Sbjct: 66  DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLM---RMTEEKFEKVINANLTGAFRVAQR 122
Query: 131 ALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW---YQIHVSAAKAAVDSITRSLALEW 187
           A + +++                       +  W    Q + +A+KA V  + RS+A E 
Sbjct: 123 ASRSMQRNKFGRMIFIG-----------SVSGLWGIGNQANYAASKAGVIGMARSIAREL 171
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
            +   +  N +APG I DT  +++   E I+  A  ++ A + G   ++
Sbjct: 172 -SKANVTANVVAPGYI-DT-DMTRALDERIQQGALQFIPAKRVGTPAEV 217

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEG 68
          LKGK  L+TG   GIG   +    + GA + + GR+    +   +A++ + G  A     
Sbjct: 5  LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG 99
          D+   E   ++V+  +  FG +D+L+N A G
Sbjct: 65 DLATSEACQQLVDEFVAKFGGIDVLINNAGG 95

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTV---------LRSAVAALH 57
           L GKVA +TG   G G   +++L   GA   A+ +  +  +V         L + V  + 
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
            +G   +  + DVR RE     +++ ++  G+LDI+V A AG   + A D   +G+  VI
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVV-ANAGIAPMSAGD---DGWHDVI 126
Query: 118 EIDSVGTFIMCHEALKYLKK 137
           +++  G +     A+  L K
Sbjct: 127 DVNLTGVYHTIKVAIPTLVK 146

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI--GLE 67
           LKGK AL+TG  +GIG  I+  L   GA + I GRR+  +   +  + +    AI   + 
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67
Query: 68  GDVRKREDAVRVVESTINHFGKLDILVN-----AAAGNFLVPAED 107
            D+   +    V+E     + K+DIL+N          F +P ED
Sbjct: 68  ADLGTEQGCQDVIE----KYPKVDILINNLGIFEPVEYFDIPDED 108

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 27/226 (11%)
Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIG-LEG 68
           L+ KV ++TG   GIG  I+ +    G+ +  +            ++H  G      +E 
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDL------------SIHDPGEAKYDHIEC 60
Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV   +     ++     +G + +LVN A        E +S   +R +I+++  G +   
Sbjct: 61  DVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYAS 120
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A+ Y+ +                  + +   A+ Y      +K AV  +T+S+AL++ 
Sbjct: 121 KFAIPYMIR----SRDPSIVNISSVQASIITKNASAY----VTSKHAVIGLTKSIALDYA 172
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
               +R N + P  I DT  V K A  E+    +D M   K   +W
Sbjct: 173 P--LLRCNAVCPATI-DTPLVRKAAELEV---GSDPMRIEKKISEW 212

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	259
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	6e-96
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-95
3imf_A	257	Short chain dehydrogenase; structural genomics, in	3e-95
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	9e-77
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-61
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-59
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	9e-59
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-58
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-58
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-58
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-58
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	5e-58
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	8e-58
1xkq_A	280	Short-chain reductase family member (5D234); parra	9e-58
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-57
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-57
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-57
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-57
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-56
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	8e-56
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-55
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-55
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-55
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-55
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	3e-55
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-55
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	5e-55
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	6e-55
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	6e-55
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	8e-55
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	8e-55
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-55
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-54
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-54
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-54
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-54
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	3e-54
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	3e-54
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-54
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	5e-54
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-54
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	8e-54
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-53
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-53
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-53
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-53
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-53
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-53
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-53
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	5e-53
3cxt_A	291	Dehydrogenase with different specificities; rossma	8e-53
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-52
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-52
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-52
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	4e-52
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	6e-52
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	7e-52
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-51
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-51
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-51
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	4e-51
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-51
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	8e-51
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-50
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-50
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-50
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-50
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	8e-50
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-49
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-49
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	2e-49
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-49
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	4e-49
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	7e-49
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	8e-49
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	9e-49
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-48
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-48
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-48
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-48
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	3e-48
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-48
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-47
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-47
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-47
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	3e-47
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	4e-47
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	5e-47
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	6e-47
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	6e-47
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-46
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-46
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-46
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-46
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-46
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-46
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-46
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-46
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	5e-46
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-45
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-45
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	3e-45
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-45
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	5e-45
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-44
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-44
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-44
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-44
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-44
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-44
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	3e-44
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	4e-44
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	4e-44
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	5e-44
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	5e-44
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	7e-44
3rih_A	293	Short chain dehydrogenase or reductase; structural	8e-44
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-43
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-43
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-43
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	4e-43
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	6e-43
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	9e-43
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-42
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-41
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-41
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-41
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	6e-41
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-41
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	7e-41
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	9e-41
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-40
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-40
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	7e-40
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	9e-40
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-39
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-39
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-39
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-38
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	3e-38
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	3e-38
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-38
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	7e-38
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-37
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-37
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	9e-37
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-36
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-36
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	3e-36
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-36
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	6e-36
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	8e-36
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-35
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-35
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	6e-35
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-34
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-34
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-34
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-34
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-33
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-33
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-32
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	6e-32
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	8e-32
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	9e-32
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	3e-31
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-29
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	1e-28
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-28
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-28
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	8e-28
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	7e-27
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	9e-27
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-26
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	7e-24
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-26
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	6e-26
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-25
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-25
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-25
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-23
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-22
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	4e-21
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-21
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	4e-19
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	5e-18
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-17
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	2e-16
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	2e-16
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	3e-16
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	3e-16
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	4e-16
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	4e-16
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	7e-16
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	8e-16
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	8e-16
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	9e-16
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	1e-15
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-15
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	2e-15
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	2e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-09
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	9e-07

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  282 bits (724), Expect = 6e-96
 Identities = 78/249 (31%), Positives = 125/249 (50%), Gaps = 10/249 (4%)

Query: 2   ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LG 60
           ++    +  +GKVA +TGGG+G+G  ++  L   GA   I  R+  VL++    + S  G
Sbjct: 16  KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG 75

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
                ++ DVR  +     V   I   G  +I++N AAGNF+ P E LSPN ++T+ +I 
Sbjct: 76  NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIV 135

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
             GT  +  E  K L K  +       G   ++I+     T + + +  ++AKA V++++
Sbjct: 136 LNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGFVVPSASAKAGVEAMS 188

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMA 239
           +SLA EWG  Y +R N I PGPIK     S+L P      +    +   + G   ++A  
Sbjct: 189 KSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANL 247

Query: 240 ALYLASDAA 248
           A +L SD A
Sbjct: 248 AAFLCSDYA 256

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  280 bits (719), Expect = 2e-95
 Identities = 99/249 (39%), Positives = 136/249 (54%), Gaps = 11/249 (4%)

Query: 2   ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLG 60
              F  D+L+ KVA +TGGGSGIGF I+    +HG    I  R    + +A   L  + G
Sbjct: 17  RHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG 76

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
              + L  DVR     +  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID
Sbjct: 77  RRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDID 136

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
           + GTF +     +   +          GG+I+NI+ATL       Q+H  +AKAAVD++T
Sbjct: 137 TSGTFNVSRVLYEKFFRDH--------GGVIVNITATLGNRGQALQVHAGSAKAAVDAMT 188

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMA 239
           R LA+EWG    IRVN +APGPI  T G+ +L   +   S         + G K +IA +
Sbjct: 189 RHLAVEWGP-QNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHS 247

Query: 240 ALYLASDAA 248
            LYLAS  A
Sbjct: 248 VLYLASPLA 256

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  279 bits (715), Expect = 3e-95
 Identities = 97/242 (40%), Positives = 135/242 (55%), Gaps = 8/242 (3%)

Query: 8   DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
           + +K KV ++TGG SG+G  ++ +  K GA + I GR K  L  A   +       + ++
Sbjct: 2   NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            DVR  +D  +++E     FG++DIL+N AAGNF+ PAEDLS NG+ +VI I   GTF  
Sbjct: 62  MDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYC 121

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
                KY  + G         G IIN+ AT  + A    IH +AAKA V ++T++LA+EW
Sbjct: 122 SQAIGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEW 174

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
           G  Y IRVN IAPGPI+ T G  KL   EE+  +    +   + G   +IA  A YL SD
Sbjct: 175 GRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSD 234

Query: 247 AA 248
            A
Sbjct: 235 EA 236

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  233 bits (597), Expect = 9e-77
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 17/254 (6%)

Query: 2   ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----- 56
            S     +L+G+VA++TGG +GIG  I  +L + G+ + I  R+   L+SA   L     
Sbjct: 8   RSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP 67

Query: 57  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
            +     I ++ ++R  E+   +V+ST++ FGK++ LVN   G FL PAE +S  G+  V
Sbjct: 68  PTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV 127

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
           +E +  GTF MC        K          GG I+NI            +H  AA+A V
Sbjct: 128 LETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIVP-TKAGFPLAVHSGAARAGV 178

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKW 234
            ++T+SLALEW     IR+N +APG I     V       +     +   + A + G   
Sbjct: 179 YNLTKSLALEWAC-SGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE 237

Query: 235 DIAMAALYLASDAA 248
           +++    +L S AA
Sbjct: 238 EVSSVVCFLLSPAA 251

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  193 bits (494), Expect = 1e-61
 Identities = 53/249 (21%), Positives = 108/249 (43%), Gaps = 20/249 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L  KV +++G G  +G  ++ +  + GA + +  R    L      +   G  A+ +  D
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +        +V+ T+  +G++D+++ NA     + P  + +    R  IE+   G   + 
Sbjct: 69  ITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLI 128

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
                 L++           G ++N+++ +   +         AK+A+ +++++LA E G
Sbjct: 129 QGFTPALEES---------KGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELG 179

Query: 189 TDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
            +  IRVN + PG I            AG    + E+I + A       +   + ++A A
Sbjct: 180 -EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASA 238

Query: 240 ALYLASDAA 248
            L++ASD A
Sbjct: 239 ILFMASDLA 247

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  188 bits (480), Expect = 2e-59
 Identities = 70/253 (27%), Positives = 111/253 (43%), Gaps = 18/253 (7%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M   +    L+G  AL+TGG  GIG+ I  +L   GA++    R +  L   +    S G
Sbjct: 1   MAGRWN---LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG 57

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
                   D+  R +   ++ +  NHF GKL+ILVN A       A+D +   +  ++ I
Sbjct: 58  FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSI 117

Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
           +    + +   A  +LK            G ++ IS+     A  Y+    A K A+D +
Sbjct: 118 NFEAAYHLSVLAHPFLKASE--------RGNVVFISSVSGALAVPYEAVYGATKGAMDQL 169

Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWD 235
           TR LA EW  D  IRVNG+ PG I  T+ V     +  + +  + +       + GE  +
Sbjct: 170 TRCLAFEWAKD-NIRVNGVGPGVIA-TSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKE 227

Query: 236 IAMAALYLASDAA 248
           +A    +L   AA
Sbjct: 228 LAAMVAFLCFPAA 240

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  186 bits (474), Expect = 9e-59
 Identities = 71/239 (29%), Positives = 110/239 (46%), Gaps = 11/239 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK A++TG G+GIG EI++     GA++ +           V  +  LG  A     D
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   ++   + +  I+  GK+DILVN A G       D+    FR   E++    F +  
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPFDMPMADFRRAYELNVFSFFHLSQ 127

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
                ++K G        GG+I+ I++             +++KAA   + R++A + G 
Sbjct: 128 LVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              IRVNGIAPG I  T  +  +   EI  K   +    + G+  DIA AAL+L S AA
Sbjct: 180 -KNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA 236

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  186 bits (475), Expect = 1e-58
 Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 14/244 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKG  AL+TGG  GIG+ I  +L   GA +    R +  L   +      G+   G   D
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78

Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +  R +  +++++  + F GKL+ILVN A       A+D +   +  ++  +    + + 
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 138

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A   LK            G +I +S+   ++A       SA+K A++ +T+SLA EW 
Sbjct: 139 QIAYPLLKASQ--------NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190

Query: 189 TDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
               IRVN +APG I     +TA       +E            + G+  +++    +L 
Sbjct: 191 -KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC 249

Query: 245 SDAA 248
             AA
Sbjct: 250 FPAA 253

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  186 bits (475), Expect = 1e-58
 Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 21/245 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L  K+A++TG  SGIG   + +    GA + I GRRK VL +A+A +   G  A+G++ D
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQAD 83

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
                +  R+ E      G++D+L   A G  ++P  +++   +    + +  G      
Sbjct: 84  SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQ 143

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           +AL  L +G            ++   +T   T T      +A+KAA+ S  R+  L+   
Sbjct: 144 KALPLLARGSS----------VVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLK- 192

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAY----KFGEKWDIAMAALYL 243
           D  IR+N ++PGP  +T G+ +LA      +    + +AA     + G   ++A AAL+L
Sbjct: 193 DRGIRINTLSPGPT-ETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFL 251

Query: 244 ASDAA 248
           ASD +
Sbjct: 252 ASDDS 256

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  186 bits (474), Expect = 1e-58
 Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 12/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+ KVAL+T    GIG  I+ +L + GA + +  R++  +   VA L   G+   G    
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 71

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V K ED  R+V   +N  G +DILV NAA   F     D +   +  ++ ++   T +M 
Sbjct: 72  VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMT 131

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
              +  ++K G        GG ++ +S+   Y         + +K A+  +T++LA+E  
Sbjct: 132 KAVVPEMEKRG--------GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELA 183

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
               IRVN +APG IK T     L   +  +    + +   + G   D A    +L S+ 
Sbjct: 184 -PRNIRVNCLAPGLIK-TNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSED 241

Query: 248 A 248
           A
Sbjct: 242 A 242

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  185 bits (473), Expect = 1e-58
 Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 18/243 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            +GK A++ GG  G+G     +L + GA + + GR ++ +          G     L  D
Sbjct: 6   YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +    +   +  +     G +D+L   A  + L P + +S   +     +++ G F    
Sbjct: 63  IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 122

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
                +++GG           I+  S+             SA+KAA+ S    LA E   
Sbjct: 123 RLTPLIREGGS----------IVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELL- 171

Query: 190 DYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
              IRVN ++PG I       AG+++    E ++   +     + G   ++A A L+LA 
Sbjct: 172 PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF 231

Query: 246 DAA 248
           +A 
Sbjct: 232 EAT 234

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  184 bits (470), Expect = 5e-58
 Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 11/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
           L GK AL+TG   GIG +I+      GA + + GR  + L +A  AL    G     +  
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+ + +    +       FG LD+LVN A  +   P  D  P  F   I ++     ++ 
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLA 137

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
               K +   G        GG II +++               +KA +   T+ LA E G
Sbjct: 138 SAVGKAMVAAGE-------GGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELG 190

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
             + IR N + P  +  T    ++   E   +     +   +F    +++ A ++LASDA
Sbjct: 191 -PHGIRANSVCPTVV-LTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDA 248

Query: 248 A 248
           A
Sbjct: 249 A 249

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  183 bits (468), Expect = 8e-58
 Identities = 65/243 (26%), Positives = 98/243 (40%), Gaps = 14/243 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L  +VA++TGG   IG      L + GA + I    + +   AV  L   G     +  D
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V   E     V S     G++DILV  A      V AED++   +   ++I+  G F  C
Sbjct: 71  VTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSC 130

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALE 186
               + + +           G+I+ I +           Q   +A+KA V    RSLA E
Sbjct: 131 QAVGRIMLEQK--------QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAE 182

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           W   + IR N +AP  I +T          E+           + G+  ++A    +LAS
Sbjct: 183 WA-PHGIRANAVAPTYI-ETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLAS 240

Query: 246 DAA 248
           DAA
Sbjct: 241 DAA 243

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  184 bits (470), Expect = 9e-58
 Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 27/255 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
              K  ++TG  +GIG   ++   + GA + I GR    L      +   G+       +
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSV 122
             DV   +   +++ ST+  FGK+D+LVN A       F     D   + +   ++++  
Sbjct: 64  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 123

Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITR 181
               M  +   +L             G I+N+S+ +    A    ++ + AKAA+D  TR
Sbjct: 124 AVIEMTKKVKPHLVAS---------KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTR 174

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYK-------FGEK 233
           S A++    + IRVN ++PG + +T   + +  P++   K  ++MA++K        G+ 
Sbjct: 175 STAIDLA-KFGIRVNSVSPGMV-ETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKP 232

Query: 234 WDIAMAALYLASDAA 248
             IA   L+LA    
Sbjct: 233 EHIANIILFLADRNL 247

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  184 bits (469), Expect = 1e-57
 Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 15/244 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGL 66
            + +  L+TGGGSGIG  ++  L   GA++ I+GR    L  AV  L +LG         
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTF 125
             D+   ++  R V++     G+L  +V+ A G+  + P   +    +R  ++++  GT 
Sbjct: 69  PTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTM 128

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            +   A + + +GG        GG  + IS+        +       K+AVD + +  A 
Sbjct: 129 YVLKHAAREMVRGG--------GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAAD 180

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
           E G    +RVN I PG I  T  V+ +    E+ S         + GE  D+A  A++L 
Sbjct: 181 ELG-ASWVRVNSIRPGLI-RTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLL 238

Query: 245 SDAA 248
           SDAA
Sbjct: 239 SDAA 242

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  183 bits (468), Expect = 1e-57
 Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 13/241 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG  +GIG +++L   + GA +A+  R    L+     +  +G  A+ +  D
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V + +    +++      G +DI V  A    +    D+    F+ + + +  G F+   
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQ 149

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS--AAKAAVDSITRSLALEW 187
            A + +   G        GG II  ++   +     Q       +KAAV  +T+++A+E 
Sbjct: 150 AAARAMVDQGL-------GGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVEL 202

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
              + IRVN ++PG I  T  V  L   +  +     +   + G   ++    LYLAS A
Sbjct: 203 A-PHQIRVNSVSPGYI-RTELVEPL--ADYHALWEPKIPLGRMGRPEELTGLYLYLASAA 258

Query: 248 A 248
           +
Sbjct: 259 S 259

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  183 bits (467), Expect = 1e-57
 Identities = 64/240 (26%), Positives = 98/240 (40%), Gaps = 11/240 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K  L+TGG  GIG  I  +    GA I    R +  L   ++     G    G   D
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71

Query: 70  VRKREDAVRVVESTINHFG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
              R +  +++++  + FG KLDIL+N        P  D +   F   I  +    + + 
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 131

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A   LK  G         G II +S+     +       SA K A++ + R+LA EW 
Sbjct: 132 QLAHPLLKASG--------CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA 183

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           +D  IR N +AP  I  T     +  +E +          +FGE  +++    +L   AA
Sbjct: 184 SD-GIRANAVAPAVIA-TPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAA 241

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  182 bits (465), Expect = 2e-57
 Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 13/249 (5%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M + F    L GK AL+TG   G+GF  +  L   GA + +   R T+L  +V  L   G
Sbjct: 1   MTALFD---LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG 57

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
             A G+  DV                   +DIL+N A   +  P  +L    ++ VI+ +
Sbjct: 58  YDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTN 117

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
               F++   A K +            GG IINI +     A       +AAK  +  +T
Sbjct: 118 LTSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAARPTVAPYTAAKGGIKMLT 170

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIAMA 239
            S+A EW   + I+ N I PG I  T   + L  ++           + ++G   ++   
Sbjct: 171 CSMAAEWA-QFNIQTNAIGPGYI-LTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGT 228

Query: 240 ALYLASDAA 248
           A++L+S A+
Sbjct: 229 AIFLSSKAS 237

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  179 bits (458), Expect = 2e-56
 Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 10/240 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVA++TGG  GIG  I+ +  + GA + I GR   V   A  ++ +        + D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
               +   ++ ++T   FG +  LVN A        E+ +   +R ++ ++  G F    
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             ++ +K  G        G  IIN+S+   +         +A+K AV  +++S AL+   
Sbjct: 123 LGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCAL 175

Query: 190 -DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            DY +RVN + PG I  T  V  L   E              GE  DIA   +YLAS+ +
Sbjct: 176 KDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNES 234

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  179 bits (457), Expect = 8e-56
 Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 16/243 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGKVA +TG   GIG+ ++    + GA +AI          A     + G+ +   + +
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           +   +     +      FG +D+ V  A          +  + + +  +I +D  G +  
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            H   K  KK G+G         +I  S  +         Q   + AKAA   + +SLA+
Sbjct: 152 SHNIGKIFKKNGKGS--------LIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAI 203

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           EW      RVN I+PG I DT  ++  A +++++K        + G   ++    LYLAS
Sbjct: 204 EWAPF--ARVNTISPGYI-DTD-ITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLAS 259

Query: 246 DAA 248
           +A+
Sbjct: 260 NAS 262

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  178 bits (455), Expect = 1e-55
 Identities = 69/253 (27%), Positives = 106/253 (41%), Gaps = 27/253 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
              KVA++TG  +GIG   ++   + GA + I GR    L      + + G+       +
Sbjct: 4   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSV 122
             DV        ++ +T+  FGKLDILVN A      +        S   +   + ++  
Sbjct: 64  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123

Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITR 181
               +  +A+ +L             G I+NIS+      AT    + S AKAA+D  TR
Sbjct: 124 SVIALTKKAVPHLSST---------KGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTR 174

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYK-------FGEK 233
           + A++    + IRVN I+PG +  T   S +  PEE   K    MA  K        G+ 
Sbjct: 175 NTAIDLI-QHGIRVNSISPGLV-ATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQP 232

Query: 234 WDIAMAALYLASD 246
            DIA    +LA  
Sbjct: 233 QDIAEVIAFLADR 245

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  178 bits (453), Expect = 2e-55
 Identities = 81/251 (32%), Positives = 123/251 (49%), Gaps = 16/251 (6%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SL 59
           M+  F    L+G+VAL+TGG  G+GF I+  L + G ++ +  R       A   L    
Sbjct: 13  MKEVFD---LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY 69

Query: 60  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
           G+  +    DV   E+  +++E+    FGKLD +VNAA  N   PAE+   + FR VIE+
Sbjct: 70  GVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129

Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDS 178
           +  GT+ +C EA   L++             IINI +      T   I   +A+K  V S
Sbjct: 130 NLFGTYYVCREAFSLLRESDNPS--------IINIGSLTVEEVTMPNISAYAASKGGVAS 181

Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIA 237
           +T++LA EWG  Y IRVN IAPG  + T     +  +  +       +   + G   D+ 
Sbjct: 182 LTKALAKEWGR-YGIRVNVIAPGWYR-TKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLK 239

Query: 238 MAALYLASDAA 248
             A++LAS+ A
Sbjct: 240 GVAVFLASEEA 250

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  177 bits (452), Expect = 2e-55
 Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 12/242 (4%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLE 67
           + + K AL+TG   G+G   +++L ++G  I I   R K         +  LG+  + ++
Sbjct: 1   MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK 60

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            +V +      + +     FG+LD+ VN AA   L P  +L    +   + I++      
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
             EA K ++K G        GG I++IS+            V  +KAA++++TR LA+E 
Sbjct: 121 AQEAAKLMEKNG--------GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVEL 172

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                I VN ++ G I DT  +      E++   A     A +  E  D+     +L S 
Sbjct: 173 S-PKQIIVNAVSGGAI-DTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSS 230

Query: 247 AA 248
            A
Sbjct: 231 KA 232

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  177 bits (451), Expect = 3e-55
 Identities = 51/242 (21%), Positives = 89/242 (36%), Gaps = 15/242 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---MGRRKTVLRSAVAALHSLGIPAIGL 66
           LK KV ++ GG   +G   +         + +     +           L   G      
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY 68

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           + D+   E+  ++ +     FGK+DI +N        P  + S   F  +  I++   + 
Sbjct: 69  QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYF 128

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
              +A K++   G           II I+ +L    T +    +  KA V+  TR+ + E
Sbjct: 129 FIKQAAKHMNPNGH----------IITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKE 178

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                 I VN IAPGP+ DT+       +E  +         +  +  DIA    +L +D
Sbjct: 179 LM-KQQISVNAIAPGPM-DTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD 236

Query: 247 AA 248
             
Sbjct: 237 GW 238

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  177 bits (452), Expect = 3e-55
 Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 28/248 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
           L GK   +TG   GIG  I+L+  + GA +AI  +           + SA AA+++ G  
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63

Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
            + L+ D+R+ +     V +T++ FG +DILVN A+  +L    D     F  + ++++ 
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNAR 123

Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSIT 180
           G+F+     L +L +             I+ ++        W+  H   + AK  +  +T
Sbjct: 124 GSFVCAQACLPHLLQAP--------NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVT 175

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
             LA E+G    + +N + P  +  T  ++ L   +                   +A AA
Sbjct: 176 LGLAAEFG-PQGVAINALWPRTVIATDAINMLPGVDAA----------ACRRPEIMADAA 224

Query: 241 LYLASDAA 248
             + +  A
Sbjct: 225 HAVLTREA 232

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  178 bits (453), Expect = 4e-55
 Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 25/251 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGL 66
             GK  ++TG  +GIG   ++   K GA + I GR +  L      +   G+PA     +
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGT 124
             DV +      ++ +T+  FGK+DILVN A  N        D     ++   +++    
Sbjct: 84  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSL 183
             M  +  ++L K         + G I+N+ S      A     + + AKAA+D  TR  
Sbjct: 144 IEMTQKTKEHLIK---------TKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCT 194

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYK-------FGEKWD 235
           A++    + +RVN ++PG +  T  +  +  PE    K   ++ + K        G+  +
Sbjct: 195 AIDLI-QHGVRVNSVSPGAV-ATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEE 252

Query: 236 IAMAALYLASD 246
           IA   ++LA  
Sbjct: 253 IANIIVFLADR 263

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  176 bits (450), Expect = 5e-55
 Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 13/243 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG GSG G  ++ +  K GA + I+ R K            +G  A+ +  D
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGE---IGDAALAVAAD 63

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           + K  D    VE+ ++ FGK+DILV NA  G+    AE + P  F  ++ ++  G ++M 
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            + + + K+ G          +I+N+++T            +A K  V S+T++LA+E  
Sbjct: 124 SKLIPHFKENGAK----GQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELA 179

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
               IRV  + P    +T  ++       EEIR K  D +   +  +  D+A AA +L S
Sbjct: 180 -PAKIRVVALNPVAG-ETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCS 237

Query: 246 DAA 248
             A
Sbjct: 238 PQA 240

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  176 bits (449), Expect = 6e-55
 Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 11/239 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L   VA++TG  +GIG  I+    K GA++ +   +     +  AA+   G  AIGLE +
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN 69

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +    V+++ ++ FGK+ +LVN A G    P  D+  + F    +++    F +  
Sbjct: 70  VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQ 128

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A  +++K G        GG I+NIS+              ++KAAV+ +TR++A + G 
Sbjct: 129 LAAPHMQKAG--------GGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGP 180

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              IRVN IAPG I  T  ++ +   EI      +    + GE  DIA AAL+L S AA
Sbjct: 181 -MGIRVNAIAPGAI-KTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAA 237

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  176 bits (448), Expect = 6e-55
 Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 18/240 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+  L+TG G GIG      L   GA +  + R +  L S V            +  D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   E      E  +   G +D+LVN AA   L P  +++   F    E++      +  
Sbjct: 61  LGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              + L   G         G I+N+S+     A        + K A+D +T+ +ALE G 
Sbjct: 117 IVARGLIARGV-------PGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG- 168

Query: 190 DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            + IRVN + P  +  T+      +         + +   KF E   +  A L+L SD +
Sbjct: 169 PHKIRVNAVNPTVV-MTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS 227

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  177 bits (450), Expect = 8e-55
 Identities = 53/247 (21%), Positives = 94/247 (38%), Gaps = 25/247 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
           L+GK   ++GG  GIG  I+ ++   GA +A++ +           + +A   +   G  
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66

Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
           A+ + GD+R  +     V  T+  FG +DI VN A+   L   E++    F  +  I   
Sbjct: 67  ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126

Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITR 181
           GT+ +    + ++K              I+ +S  +     W +      AK  +     
Sbjct: 127 GTYAVSQSCIPHMKGRD--------NPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCAL 178

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
            +A E   D  I  N + P     TA V  L   +         A  +  +    A AA 
Sbjct: 179 GIAEELR-DAGIASNTLWPRTTVATAAVQNLLGGDE--------AMARSRKPEVYADAAY 229

Query: 242 YLASDAA 248
            + +  +
Sbjct: 230 VVLNKPS 236

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  177 bits (450), Expect = 8e-55
 Identities = 75/250 (30%), Positives = 102/250 (40%), Gaps = 21/250 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
               VAL+TG GSGIG   +L L   G  +  +GR +T +      +   G  AI LE D
Sbjct: 26  QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEAD 85

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V         V   +  FG LDI+V NA       P +DL P  +   I ++  GTF+  
Sbjct: 86  VSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTL 145

Query: 129 HEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           H  + YLK+ G        GG I+ +S         T      +A KAA  +I + LALE
Sbjct: 146 HLTVPYLKQRG--------GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALE 197

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK--------FGEKWDIAM 238
            G  + IRVN + PG I +T              A                 G   D+A 
Sbjct: 198 LG-KHHIRVNAVCPGAI-ETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAE 255

Query: 239 AALYLASDAA 248
              +L S+ A
Sbjct: 256 LIRFLVSERA 265

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  177 bits (450), Expect = 9e-55
 Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 12/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEG 68
            +G++AL+TGGG+G+G  I+  L   G ++ I GRR  VL +A   +    G     +  
Sbjct: 31  GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVC 90

Query: 69  DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           DV   +    +  +    F +LD+LV NA +    VP E+++   +  ++  +  G F+ 
Sbjct: 91  DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLC 150

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
              A + +K           GG IIN  +    T        +A K A+  +T+S AL+ 
Sbjct: 151 TQHAFRMMKAQTPR------GGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDG 204

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
              + I    I  G    T   ++++   +++     +AA        IA A +Y+AS  
Sbjct: 205 R-MHDIACGQIDIGNA-ATDMTARMSTGVLQANGE--VAAEPTIPIEHIAEAVVYMASLP 260

Query: 248 A 248
            
Sbjct: 261 L 261

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  175 bits (447), Expect = 2e-54
 Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 25/253 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL--HSLGIPAIGLE 67
           L   VA++TGG SGIG      L + GAA+A   R    LR+A +AL     G       
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            DV          E+     G   ILVN A    +    + +   +   +++        
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHP 125

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
               L  L+              I+ +++ L      + +  SAA+A V ++ RS+A E+
Sbjct: 126 VRAFLPQLESRA--------DAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEF 177

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK------------FGEKWD 235
                +RVNGI  G + ++    +   E    +  D+                  G+  +
Sbjct: 178 APK-GVRVNGILIGLV-ESGQWRRR-FEAREERELDWAQWTAQLARNKQIPLGRLGKPIE 234

Query: 236 IAMAALYLASDAA 248
            A A L+LAS  +
Sbjct: 235 AARAILFLASPLS 247

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  176 bits (448), Expect = 2e-54
 Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 15/244 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GK+A++TG  SGIG   +L   + GA + +  R    L      +   G  A  L GD
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V        +VE  +  FG LD    NA A   +     LS  G+R  ++ +    F+  
Sbjct: 66  VGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAA 125

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEW 187
              +  +   G        GG +   S+ + +TA +  +   +A+KA +  + ++LA+E 
Sbjct: 126 KYQVPAIAALG--------GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVEL 177

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
           G    IRVN + PG   DT         A  E R       A  +     +IA AALYLA
Sbjct: 178 GAR-GIRVNALLPGGT-DTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLA 235

Query: 245 SDAA 248
           SD A
Sbjct: 236 SDGA 239

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  175 bits (445), Expect = 2e-54
 Identities = 71/242 (29%), Positives = 99/242 (40%), Gaps = 16/242 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G  A +TG GSGIG EI       GA + ++ R    L  A   L      A  +  D
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--GAAVAARIVAD 66

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   E               + ILVN+A    L  A +     +R V+ ++  G F    
Sbjct: 67  VTDAEAMTAAAA-EAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASR 125

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS--AAKAAVDSITRSLALEW 187
              + +   G G         I+N+ +         Q   S  A+K AV  +TR+LA EW
Sbjct: 126 AFGRAMVARGAGA--------IVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEW 177

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                +RVN +APG +  T    K+    E+     D     + GE  +IA AAL+LAS 
Sbjct: 178 A-GRGVRVNALAPGYV-ATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASP 235

Query: 247 AA 248
           AA
Sbjct: 236 AA 237

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  175 bits (445), Expect = 2e-54
 Identities = 68/251 (27%), Positives = 107/251 (42%), Gaps = 22/251 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
           + GKVA++TG  SGIG  I+    K GA I ++ R+   L  A  +L    G+  + +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV   E    VVES  + FG  DILVN A         + +   ++   E+  +    + 
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
              +  ++  G        GG II+ ++       WY+   +  KAA+   +++LA E  
Sbjct: 125 RGLVPGMRARG--------GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWDIA 237
            D  IRVN I PG I  T    K A E  +    D+    +           F    ++A
Sbjct: 177 KD-NIRVNCINPGLI-LTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELA 234

Query: 238 MAALYLASDAA 248
              ++L S+ A
Sbjct: 235 NFFVFLCSERA 245

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  174 bits (445), Expect = 3e-54
 Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 11/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
           L+GKV ++TG  +G+G  ++++     A + +  R  +    S +  +  +G  AI ++G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV    D + +V+S I  FGKLD+++N A     V + ++S + +  VI+ +  G F+  
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA+KY  +           G +IN+S+          +H +A+K  +  +T +LALE+ 
Sbjct: 125 REAIKYFVENDI-------KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
               IRVN I PG I +T   ++  A  E R+     +     GE  +IA  A +LAS  
Sbjct: 178 P-KGIRVNNIGPGAI-NTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE 235

Query: 248 A 248
           A
Sbjct: 236 A 236

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  175 bits (445), Expect = 3e-54
 Identities = 69/248 (27%), Positives = 107/248 (43%), Gaps = 20/248 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GK AL+TG   GIG   +    + GA +AI        R A A +   G  A  ++ D
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V +++     + +T+ H G LDILVN AA   L P  +++   +  +  I+  GT     
Sbjct: 63  VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQ 122

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A + +   GR       GG IIN+++              A KAAV S+T+S  L+   
Sbjct: 123 AAARQMIAQGR-------GGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLI- 174

Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
            + I VN IAPG +            A        E +    + +   + G   D+   A
Sbjct: 175 KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMA 234

Query: 241 LYLASDAA 248
           ++LAS  +
Sbjct: 235 IFLASAES 242

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  174 bits (444), Expect = 5e-54
 Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 15/241 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+ KVA++TG   GIG E S  L + GA + +    +T L  A A+   +G  A+    D
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS---VGRGAVHHVVD 65

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           +        +++ TI+ FG+LDI+ N A  +    +    ++ + +     +++ GT +M
Sbjct: 66  LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLM 125

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
           C  A+  L   G        GG I+NIS+   + A       +  KAA++++TR +A ++
Sbjct: 126 CKYAIPRLISAG--------GGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQY 177

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
           G    +R N IAPG +  T  +    P+ I      +  A + GE  +IA    +LASD 
Sbjct: 178 GRH-GVRCNAIAPGLV-RTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDR 235

Query: 248 A 248
           A
Sbjct: 236 A 236

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  174 bits (444), Expect = 5e-54
 Identities = 75/245 (30%), Positives = 118/245 (48%), Gaps = 21/245 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             GKV ++TGGG GIG  I       GA + I  + ++  R+    L      A+ +  D
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----AVFILCD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V + +D   +V  TI  FG+LD +VN A         E+ S  GFR ++E++ +GT+ + 
Sbjct: 63  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 122

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             AL YL+K           G +INIS+ +        +   A K AV ++T++LAL+  
Sbjct: 123 KLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDES 173

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
             Y +RVN I+PG I  T    +LA     P     +        + G+  ++  AA++L
Sbjct: 174 -PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFL 231

Query: 244 ASDAA 248
           AS+A 
Sbjct: 232 ASEAN 236

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  174 bits (443), Expect = 6e-54
 Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 16/242 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
              +  ++ G G  IG   +++  + GA + +          +AVA +  LG  A+ ++ 
Sbjct: 6   FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65

Query: 69  DVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           D+    +    + +  + FG++  LV+ A          ++    +  V++++    F+ 
Sbjct: 66  DLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLT 125

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALE 186
              AL  + KGG           I+  S+           +  + +K AV + TR LA E
Sbjct: 126 AKTALPKMAKGGA----------IVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKE 175

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
            G    IRVN + PG I  T         E+R +     +  + G   D+A    +LASD
Sbjct: 176 VGPK--IRVNAVCPGMI-STTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASD 232

Query: 247 AA 248
            A
Sbjct: 233 DA 234

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  173 bits (442), Expect = 8e-54
 Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 11/243 (4%)

Query: 8   DILKGKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIG 65
            +LKGKV L+T   G+GIG   + +    GA + I    +  L      L  LG+     
Sbjct: 18  GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEA 77

Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +  DV   E    ++  T+   G+LD+LVN A      P  D++   +  V+ +      
Sbjct: 78  VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVM 137

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
                AL+Y +           GG+I+N ++ L + A   Q H +AAKA V ++TR  A+
Sbjct: 138 RATRAALRYFRGVDH-------GGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAI 190

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           E   ++ +R+N ++P        + K +  E+  +     A  +  E W++A    +LAS
Sbjct: 191 EAV-EFGVRINAVSPSIA-RHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLAS 248

Query: 246 DAA 248
           D +
Sbjct: 249 DYS 251

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  173 bits (441), Expect = 1e-53
 Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 12/242 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK KV ++TG GSGIG  I+ +   + + +  +   +  L   V  L  +G   +G++ D
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V K++D    V  T   + ++D+L  NA   + + P  ++S   +  V+ ++    F   
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSS 124

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
              +  + K G         G+I+N ++       +     + AK  +  +TRS+A  +G
Sbjct: 125 RAVIPIMLKQG--------KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG 176

Query: 189 TDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
            D  IR   + PG +K     G SK +   +R+       + +  E  DIA   ++LASD
Sbjct: 177 -DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASD 235

Query: 247 AA 248
            A
Sbjct: 236 EA 237

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  173 bits (442), Expect = 1e-53
 Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 16/249 (6%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M  PF    L G+ A++TG GSGIG  I+    + GA +   GR    ++     +   G
Sbjct: 23  MTGPFS---LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGG 78

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
             A  +  D+   E A  V E  +    ++D+LVN A      PAE++S   +R V+ ++
Sbjct: 79  GSAEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVN 137

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
               +++       +   G G+        I+ I++ L +         +A+K AV  +T
Sbjct: 138 LDAAWVLSRSFGTAMLAHGSGR--------IVTIASMLSFQGGRNVAAYAASKHAVVGLT 189

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIAMA 239
           R+LA EW     + VN +APG +  TA  + L  ++ R+   T  + A ++    D+   
Sbjct: 190 RALASEWAG-RGVGVNALAPGYV-VTANTAALRADDERAAEITARIPAGRWATPEDMVGP 247

Query: 240 ALYLASDAA 248
           A++LASDAA
Sbjct: 248 AVFLASDAA 256

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  173 bits (440), Expect = 1e-53
 Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 18/240 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             G  AL+TG G GIG +    L   GA +  + R  + L S              +  D
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   +      E  +   G +D+LVN AA   + P  +++   F     ++    F +  
Sbjct: 61  LGDWDA----TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 116

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              + +   G         G I+N+S+ + +      I  S+ K A+  +T+++A+E G 
Sbjct: 117 MVARDMINRGV-------PGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG- 168

Query: 190 DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            + IRVN + P  +  T    K+ A  E   K  +     KF E  D+  + L+L SD +
Sbjct: 169 PHKIRVNSVNPTVV-LTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRS 227

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  173 bits (441), Expect = 1e-53
 Identities = 52/247 (21%), Positives = 100/247 (40%), Gaps = 18/247 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
              K  ++TGG  GIG   +  +   GA +A++ R           +    G+     + 
Sbjct: 12  FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 71

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV   +   + ++      G +  L+  A  + + PA +L+   F  V +++  G F  C
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 131

Query: 129 HEALKYLKKGGRGQASSSSGGIIINIS-------ATLHYTATWYQIHVSAAKAAVDSITR 181
               K   +  +        G I+  S              +  Q+  +++KAA  ++ +
Sbjct: 132 RAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 184

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
            LA EW     IRVN ++PG + +T   + +  ++IR      +   +F +  ++   A+
Sbjct: 185 GLAAEWA-SAGIRVNALSPGYV-NTDQTAHM-DKKIRDHQASNIPLNRFAQPEEMTGQAI 241

Query: 242 YLASDAA 248
            L SD A
Sbjct: 242 LLLSDHA 248

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  173 bits (440), Expect = 2e-53
 Identities = 67/244 (27%), Positives = 116/244 (47%), Gaps = 18/244 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L  +V ++TGGGSGIG   +    K+GA + +    +         +   G  A G+  D
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVD 81

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +DA  +VE T   +G++D+LVN A          +    +  ++ ++  G F+   
Sbjct: 82  VSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSK 141

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +  +++ G        GG IIN ++    +A   +    A+K A+ S+TR++A++   
Sbjct: 142 YVIPVMRRNG--------GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAK 193

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
           +  IRVN +APG I D+   +K+      P ++RS         + G   +IA A L+LA
Sbjct: 194 E-GIRVNAVAPGTI-DSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLA 251

Query: 245 SDAA 248
           SD +
Sbjct: 252 SDRS 255

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  171 bits (437), Expect = 3e-53
 Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 18/244 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TGG SG+G E+   L   GA +A     +   +   A L   G  ++ +  D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V    D   V+ +     G L++LVN A        E      F  +++I++   FI C 
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           + +  +K+          GG IIN+++   +         SA+KAAV ++TR+ AL    
Sbjct: 121 QGIAAMKET---------GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRK 171

Query: 190 D-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLA 244
             YAIRVN I P  I  T  +    P+ +  +   +        +      IA   L+LA
Sbjct: 172 QGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230

Query: 245 SDAA 248
           SD +
Sbjct: 231 SDES 234

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  171 bits (437), Expect = 4e-53
 Identities = 60/255 (23%), Positives = 104/255 (40%), Gaps = 26/255 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             GKV L+TG G  IG   +L+L + G AIA++   +  L  A A++   G+ A     D
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V   E  +  V+S +  FGK+D L  NA       P +D   + F  V+ I+  G F + 
Sbjct: 65  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 124

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
               + +             G I+N ++               +K A+ ++T + AL+  
Sbjct: 125 KAVSRQMITQN--------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 176

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA---------------PEEIRSKATDYMAAYKFGEK 233
             Y IRVN I+PG +     + +                 P+ +  +    +   ++G+ 
Sbjct: 177 -PYNIRVNAISPGYM-GPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 234

Query: 234 WDIAMAALYLASDAA 248
            +I     +L  D +
Sbjct: 235 NEIPGVVAFLLGDDS 249

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  171 bits (436), Expect = 5e-53
 Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 16/242 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            + KV ++TG G GIG   +  L + GAA+ +         +    + + G  AI +  D
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---PAEDLSPNGFRTVIEIDSVGTFI 126
           V   E A  + + T+  FG +D LVN AA    +       + P  ++  + ++  G   
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALW 126

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
                 K + K G        GG I+N S+T    A  Y  +   AK  ++ +T+ L+ E
Sbjct: 127 CTRAVYKKMTKRG--------GGAIVNQSST---AAWLYSNYYGLAKVGINGLTQQLSRE 175

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
            G    IR+N IAPGPI DT       P+E+       +   + G   D+    L+L SD
Sbjct: 176 LGG-RNIRINAIAPGPI-DTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSD 233

Query: 247 AA 248
            A
Sbjct: 234 EA 235

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  169 bits (431), Expect = 2e-52
 Identities = 74/240 (30%), Positives = 114/240 (47%), Gaps = 13/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K+A++TGG +GIG  I+ +    GA IAI          A AA+ +LG   + ++ D
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V +  D     +  I+ FG+ DILVN A    L+P ++L+   ++   EI+    F+M  
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 122

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +  +K+ G         G IIN+++T ++       H  + KAA    TR+LA + G 
Sbjct: 123 AFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGK 174

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAA 248
              I VN IAP  +  TA     A   +     + + A        D+  AA +LASD A
Sbjct: 175 -DGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDA 232

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  169 bits (431), Expect = 3e-52
 Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 9/242 (3%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
           LKGK  L+TG   GIG   +    + GA + + GR+    +   +A++ + G  A     
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64

Query: 69  DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           D+   E   ++V+  +  FG +D+L+ NA       P  ++    +  V++ +     + 
Sbjct: 65  DLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMT 124

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALE 186
              AL +L    +    S     +I+  +   +T          AAKA + ++ ++    
Sbjct: 125 TKFALPHLAAAAKA---SGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDF 181

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
              D  +R N ++PG + DTA  +    +++R + ++ +   +FG   ++A A L+ AS 
Sbjct: 182 HTKD-GVRFNIVSPGTV-DTAFHADK-TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASH 238

Query: 247 AA 248
            A
Sbjct: 239 LA 240

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  170 bits (433), Expect = 3e-52
 Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 14/251 (5%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M   F    L G++AL+TGG  GIG  I+  L + GA + I  R           L + G
Sbjct: 21  MHPYFS---LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG 77

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
                +  D+     A R+ ++      +LDILVN A  ++    E    +G+  V++++
Sbjct: 78  -DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLN 136

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSI 179
               F    + L  L++    +    +   +INI +    +A   Q +    +KAA+  +
Sbjct: 137 VTSVFSCIQQLLPLLRRSASAE----NPARVINIGSVAGISAMGEQAYAYGPSKAALHQL 192

Query: 180 TRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
           +R LA E      I VN IAPG    + T  +      +     +  +   ++G   ++A
Sbjct: 193 SRMLAKELV-GEHINVNVIAPGRFPSRMTRHI--ANDPQALEADSASIPMGRWGRPEEMA 249

Query: 238 MAALYLASDAA 248
             A+ LA  A 
Sbjct: 250 ALAISLAGTAG 260

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  169 bits (430), Expect = 4e-52
 Identities = 51/248 (20%), Positives = 97/248 (39%), Gaps = 19/248 (7%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            KVA++TGG  GIG  IS +L   G  IA+  + +++      +  + +    A+ +  D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  + +    ++      G  D+LVN A    + P  +++    + +  ++    F    
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A +   + G         G IIN ++             S  K AV  +T++ A E   
Sbjct: 122 AASRKFDELGV-------KGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAP 174

Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
                VN  APG +          + + ++     E   + +  +A  +     D+A   
Sbjct: 175 -KGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLV 233

Query: 241 LYLASDAA 248
            +LAS+ +
Sbjct: 234 SFLASENS 241

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  169 bits (430), Expect = 6e-52
 Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 14/238 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              K+A++TG GSG+G  +++ L   G  +A+ GRR   L+   A    +G  A+ +  D
Sbjct: 26  TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAE---IGDDALCVPTD 82

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V   +    +  +T+  FG++D+L  NA  G   +P EDL+   ++ V++ +  G F+  
Sbjct: 83  VTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCT 142

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA + +K           GG IIN  +    +   Y    +A K A+  +T+S +L+  
Sbjct: 143 QEAFRVMKAQEPR------GGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGR 196

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
             + I    I  G   DT    K+     ++  +  +      +   +A A +Y+AS 
Sbjct: 197 -VHDIACGQIDIGNA-DTPMAQKMKAGVPQADLSIKVE--PVMDVAHVASAVVYMASL 250

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  168 bits (428), Expect = 7e-52
 Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 21/244 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             GK  L+TGG  GIG  I+    + GA +A+   R       VA      I     + D
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK--EVAE----AIGGAFFQVD 57

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +    + VR VE      G++D+LVN AA      A  +    +R V+E++      +  
Sbjct: 58  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA 117

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A + ++K G        GG I+N+++     A       +A+K  + ++TRSLAL+   
Sbjct: 118 LAAREMRKVG--------GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA- 168

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
              IRVN +APG I  T  V +       PE  R    D  A  + G+  ++A A L+LA
Sbjct: 169 PLRIRVNAVAPGAI-ATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 227

Query: 245 SDAA 248
           S+ A
Sbjct: 228 SEKA 231

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  168 bits (427), Expect = 1e-51
 Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 15/242 (6%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDV 70
            +VA++TG  SG G  I+ +    G  +A +      L        H+     + +  DV
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 71  RKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
               D    + +T+  FG +D+LVN A     +            F  V+ ++  G F+ 
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
           C   L ++   G         G+I+NI++     A   +   + +K AV  +T+S+A+++
Sbjct: 122 CRAVLPHMLLQG--------AGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDY 173

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                IR N + PG I +T          E+R +    +   + G    +A A ++LA +
Sbjct: 174 AGS-GIRCNAVCPGMI-ETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGE 231

Query: 247 AA 248
            A
Sbjct: 232 DA 233

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  168 bits (428), Expect = 1e-51
 Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 20/248 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+ A++TGG  GIG  I+  L K GA +AI        ++ VA    L      +E D
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAG---LENGGFAVEVD 66

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V KR      ++  I+  G  D+L   A  + + PA D++   +    ++++ G F+   
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQ 126

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A ++            + G+I+N ++           H SA+K AV   T++LA E   
Sbjct: 127 IACRHFLASN-------TKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAP 179

Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
              IRVN + PG +K           A +  + PE +R++        +  E  D+A   
Sbjct: 180 -KNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVV 238

Query: 241 LYLASDAA 248
           ++LASDAA
Sbjct: 239 VFLASDAA 246

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  167 bits (425), Expect = 3e-51
 Identities = 66/240 (27%), Positives = 99/240 (41%), Gaps = 13/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
              KVA++TG   GIG  I+ +L   G  + I    +          + + G  A+  + 
Sbjct: 25  ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQA 84

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV       R+  +    FG +D+LVN A    L    +     F  VI ++  GTF   
Sbjct: 85  DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTL 144

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA + L+ GGR          IIN+S +            +AAKA V+++T  L+ E  
Sbjct: 145 REAAQRLRVGGR----------IINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELR 194

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
               I VN +APGP   T    +   +E+R +        + G   DIA A  +LA    
Sbjct: 195 G-RDITVNAVAPGPT-ATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDG 252

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  166 bits (424), Expect = 4e-51
 Identities = 65/245 (26%), Positives = 102/245 (41%), Gaps = 17/245 (6%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KVAL+TG G GIG  I+L+L K G A+AI        ++  + ++  G  A+ ++ DV  
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
           R+     VE      G  D++VN A      P E ++P     V  I+  G       A+
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           +  KK G        GG IIN  +   +         S++K AV  +T++ A +      
Sbjct: 123 EAFKKEGH-------GGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP-LG 174

Query: 193 IRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           I VNG  PG +K           +  +        ++    +   +  E  D+A    YL
Sbjct: 175 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 234

Query: 244 ASDAA 248
           AS  +
Sbjct: 235 ASPDS 239

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  167 bits (425), Expect = 4e-51
 Identities = 57/252 (22%), Positives = 95/252 (37%), Gaps = 27/252 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+VAL+TGG SG+G  +  +    GA +A++ +    LR    A    G  A+G+ GD
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA-----AGNFLVPAEDLSPNGFRTVIEIDSVGT 124
           VR  +D  R  E  +  FGK+D L+  A     +       ED     F  +  ++  G 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
                  L  L             G ++   +   +         +A K AV  + R +A
Sbjct: 120 IHAVKACLPALVSS---------RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMA 170

Query: 185 LEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDI 236
            E      +RVNG+APG +       + +             D + +     +     + 
Sbjct: 171 FELAPH--VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEY 228

Query: 237 AMAALYLASDAA 248
             A ++ A+   
Sbjct: 229 TGAYVFFATRGD 240

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  165 bits (421), Expect = 8e-51
 Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 22/245 (8%)

Query: 8   DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---I 64
           ++LKG+V L+TG   GIG   +     HGA++ ++GR +  L      + S G P    I
Sbjct: 10  ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLII 69

Query: 65  GLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
            L  +    +    +     + FG+LD L+ NA+      P E L    F  V+ ++   
Sbjct: 70  ALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNA 129

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
           TF++    L  LK+             I   S+++             +K A + + ++L
Sbjct: 130 TFMLTRALLPLLKRSE--------DASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTL 181

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           A E     A+R N I PG    T   ++  P+E                  DI    LYL
Sbjct: 182 ADELEGVTAVRANSINPGAT-RTGMRAQAYPDEN---------PLNNPAPEDIMPVYLYL 231

Query: 244 ASDAA 248
               +
Sbjct: 232 MGPDS 236

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  165 bits (421), Expect = 1e-50
 Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 25/244 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            +GKVAL+TG   GIG  +   L   GA +A+  R      + +AA        + L GD
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRA----VAGIAA-------DLHLPGD 74

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +R+   A  +  +     G+LDI+VN A         + +   +   + ++    F +C 
Sbjct: 75  LREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICR 134

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A+  +   G        GG I+N+++                KAA+ S+T+ + ++   
Sbjct: 135 AAIPLMAAAG--------GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAP 186

Query: 190 DYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
              IR+N + P  +     +         P+   ++    +   +  E  DIA   L+LA
Sbjct: 187 Q-GIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA 245

Query: 245 SDAA 248
           SDAA
Sbjct: 246 SDAA 249

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  165 bits (419), Expect = 2e-50
 Identities = 70/245 (28%), Positives = 107/245 (43%), Gaps = 18/245 (7%)

Query: 10  LKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIG 65
           LKGKV ++TG  G  G+G E +    + GAA+AI    +             + GI A  
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77

Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
            +  V   E   ++V+  +  FG++D  +  A         D S   +  V+++D  GTF
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTF 137

Query: 126 IMCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
                   + K+ G G    ++S  G I N            Q   + AKA    + RSL
Sbjct: 138 HCAKAVGHHFKERGTGSLVITASMSGHIANFPQ--------EQTSYNVAKAGCIHMARSL 189

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           A EW  D+  RVN I+PG I DT  +S   P+E +      +   + G   ++  A +Y 
Sbjct: 190 ANEWR-DF-ARVNSISPGYI-DTG-LSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYF 245

Query: 244 ASDAA 248
           ASDA+
Sbjct: 246 ASDAS 250

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  165 bits (419), Expect = 3e-50
 Identities = 56/245 (22%), Positives = 93/245 (37%), Gaps = 19/245 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVA++TG G+GIG  ++ +L   G  +           +A   +   G  A     D
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVD 83

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +  + +V++ +  FG +D LV  A    L    D +   F  VI I+  G ++   
Sbjct: 84  VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTK 143

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A   + + G        GG I+N+S+     A         +KA +  ++R  A E   
Sbjct: 144 HAAPRMIERG--------GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR- 194

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK------FGEKWDIAMAALYL 243
              IR N + P  + DT            +       +             ++A   ++L
Sbjct: 195 SSGIRSNTLLPAFV-DTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFL 253

Query: 244 ASDAA 248
            SD A
Sbjct: 254 LSDDA 258

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  164 bits (418), Expect = 4e-50
 Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 20/249 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
              +V L+TGGGSG+G   +++L   GA ++++      L ++ AA+         +   
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70

Query: 68  GDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
            DV         V +T   FG++D    NA       P E  +   F  V+ I+  G F+
Sbjct: 71  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 130

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
              + LK +++ G         G+++N ++         Q   +AAK  V  +TR+ A+E
Sbjct: 131 GLEKVLKIMREQG--------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVE 182

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMA 239
           +G  Y IR+N IAPG I  T  V     +            +        +GE  +IA  
Sbjct: 183 YG-RYGIRINAIAPGAI-WTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAV 240

Query: 240 ALYLASDAA 248
             +L SD A
Sbjct: 241 VAFLLSDDA 249

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  163 bits (414), Expect = 8e-50
 Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 23/243 (9%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
            +AL+T      G      L + G  +                         G       
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE----SENPG--TIALA 55

Query: 73  REDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
            +   R+V++T+ H   +D +V+          +P E  S    R + E  S+   ++  
Sbjct: 56  EQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A+  L+  G        G  +I I++++      Y      A+AA  ++  S A     
Sbjct: 116 SAIAPLRAAG--------GASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSR 167

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
              I +  I P    +       +      E+R +    +   + G   ++     +LAS
Sbjct: 168 -DGILLYAIGPNFF-NNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLAS 225

Query: 246 DAA 248
             A
Sbjct: 226 RRA 228

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  162 bits (413), Expect = 1e-49
 Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 24/252 (9%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M    K D+L  ++ L+TG   GIG E ++   ++GA + ++GR +  LR   + ++   
Sbjct: 1   MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET 60

Query: 61  IPA---IGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTV 116
                   L+      E+  ++ +    ++ +LD ++ NA     + P  + +P  ++ V
Sbjct: 61  GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV 120

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
           ++++   TF++    L  L K           G ++  S+++           +A+K A 
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSD--------AGSLVFTSSSVGRQGRANWGAYAASKFAT 172

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           + + + LA E+     +RVN I PG    TA  +   P E            K     DI
Sbjct: 173 EGMMQVLADEYQQR--LRVNCINPGGT-RTAMRASAFPTED---------PQKLKTPADI 220

Query: 237 AMAALYLASDAA 248
               L+L  D +
Sbjct: 221 MPLYLWLMGDDS 232

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  165 bits (419), Expect = 1e-49
 Identities = 64/249 (25%), Positives = 97/249 (38%), Gaps = 30/249 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
           L G    +TG   GIG  I+L+  K GA I I  +           + +A   + ++G  
Sbjct: 43  LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 102

Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
           A+    DVR  +     VE  I  FG +DILVN A+   L    D        ++ +++ 
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162

Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSIT 180
           GT++     + YLKK             I+NIS  L+    W++ H   + AK  +    
Sbjct: 163 GTYLASKACIPYLKKSK--------VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYV 214

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI-AMA 239
             +A E+  +  I VN + P     TA +  L    I               K DI A A
Sbjct: 215 LGMAEEFKGE--IAVNALWPKTAIHTAAMDMLGGPGIE----------SQCRKVDIIADA 262

Query: 240 ALYLASDAA 248
           A  +     
Sbjct: 263 AYSIFQKPK 271

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  162 bits (413), Expect = 2e-49
 Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 31/249 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              KVA++TGG SGIG  +   L ++GA +  +   +    +                 D
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   E+    VE T   +G++DILVN A      P        +R +I+++  G+++M  
Sbjct: 62  VTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAK 121

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +  +   G         G IINI++   Y AT        +K A+  +TRS+A+++  
Sbjct: 122 YTIPVMLAIG--------HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP 173

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGEKWDIAMA 239
              IR N + PG I  T  V K A  E+           +           G   ++A  
Sbjct: 174 K--IRCNAVCPGTI-MTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEV 230

Query: 240 ALYLASDAA 248
             +LASD +
Sbjct: 231 VAFLASDRS 239

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  162 bits (412), Expect = 3e-49
 Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 12/243 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
               V L+TGG  GIG  +     + G  + +     +    + VAA+   G  A+ + G
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83

Query: 69  DVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           DV    D   +  +    FG+LD LVN A   ++    +++S      ++ ++  G+ + 
Sbjct: 84  DVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILC 143

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
             EA++ + +   GQ     GG I+N+S  A +  +AT Y +  +A+KAA+D+ T  LA 
Sbjct: 144 AAEAVRRMSRLYSGQ-----GGAIVNVSSMAAILGSATQY-VDYAASKAAIDTFTIGLAR 197

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           E      IRVN + PG I +T   +     +   +    +   + G   ++A A LYL S
Sbjct: 198 EVA-AEGIRVNAVRPGII-ETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLS 255

Query: 246 DAA 248
            +A
Sbjct: 256 PSA 258

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  161 bits (411), Expect = 4e-49
 Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 24/252 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           L GKVAL TG G GIG  I+++LG+ GA++ +  G         VA L  LG   + ++ 
Sbjct: 19  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+ K  + V + +  ++HFG LD +++ +         +++   F  V  +++ G F + 
Sbjct: 79  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 138

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEW 187
            + LK+ ++GGR          II  S+     T        + +KAAV+   R+ A++ 
Sbjct: 139 QQGLKHCRRGGR----------IILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDC 188

Query: 188 GTDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
           G    + VN IAPG +K              G   +  E+I     +     + G   DI
Sbjct: 189 G-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADI 247

Query: 237 AMAALYLASDAA 248
             A   L  + +
Sbjct: 248 GRAVSALCQEES 259

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  161 bits (409), Expect = 7e-49
 Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 23/251 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
           L GKVAL+TG G GIG  +++ LG+ GA + +            V+ + +LG  AI ++ 
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+R+  + V++ +  + HFG LDI V+ +        +D++   F  V  +++ G F + 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
            EA ++L +GGR          I+  S+      +       S +K AVDS  R  + + 
Sbjct: 136 REAYRHLTEGGR----------IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDC 185

Query: 188 GTDYAIRVNGIAPGPIK----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
           G D  I VN +APG                  +    E+ +  A      ++ G   D+A
Sbjct: 186 G-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVA 244

Query: 238 MAALYLASDAA 248
               +L S   
Sbjct: 245 NVVGFLVSKEG 255

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  160 bits (408), Expect = 8e-49
 Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 19/239 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVAL++GG  G+G      +   GA +          ++  A L      A  +  D
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V +       V++ +  FG L +LVN A    +   ED +   ++ +++++  G F+   
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 121

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +K +K+ G         G IINIS+      T      +A K AV  +T+S ALE G 
Sbjct: 122 AVVKPMKEAG--------RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG- 172

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              IRVN I PG +  T     +  +  +       A  +  E  +++   +YLASD +
Sbjct: 173 PSGIRVNSIHPGLV-KTPMTDWVPEDIFQ------TALGRAAEPVEVSNLVVYLASDES 224

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  160 bits (408), Expect = 9e-49
 Identities = 67/240 (27%), Positives = 96/240 (40%), Gaps = 15/240 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK  ++TGG  G+G E + Q    GA + +         +    L   G  A     D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   ED  RVV      FG +D LVN A  +  +  E  S   FR V+EI+  G FI   
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +  +K  G        GG I+NIS+              A+K  V  +++  A+E G 
Sbjct: 120 TVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG- 170

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK-WDIAMAALYLASDAA 248
              IRVN + PG    T   ++                 + G +  +IA A + L SD +
Sbjct: 171 TDRIRVNSVHPGMT-YTPMTAET-GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS 228

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  161 bits (409), Expect = 1e-48
 Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 24/252 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           L+GKVAL+TG G GIG E++++LG+ G  + +            VAA+   G  A  ++ 
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +V   ED VR+ E  +  FGKLDI+ + +        +D++P  F  V  I++ G F + 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146

Query: 129 HEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
            EA K+L+ GGR          +I + S T    A       S +K A+++  R +A++ 
Sbjct: 147 REAYKHLEIGGR----------LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 196

Query: 188 GTDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
             D  I VN +APG IK              G +    E     A  +    + G   DI
Sbjct: 197 A-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI 255

Query: 237 AMAALYLASDAA 248
           A    +LAS+  
Sbjct: 256 ARVVCFLASNDG 267

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  161 bits (409), Expect = 2e-48
 Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 16/243 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
           LK + AL+TGG SGIG   ++   + GA +AI  +   +   +   A +   G  A+ L 
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFI 126
           GD+     A  +V       G LDIL   A     +P  +DL+   F+    ++    F 
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +  EA+  L KG            II  S+   Y  + + +  +A KAA+ + +R LA +
Sbjct: 167 ITQEAIPLLPKGAS----------IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQ 216

Query: 187 WGTDYAIRVNGIAPGPIKDTAG-VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
              +  IRVN +APGPI  TA  +S    ++   +        + G+  ++A   +YLAS
Sbjct: 217 VA-EKGIRVNIVAPGPI-WTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS 274

Query: 246 DAA 248
             +
Sbjct: 275 QES 277

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  160 bits (406), Expect = 2e-48
 Identities = 67/252 (26%), Positives = 106/252 (42%), Gaps = 28/252 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
           + GKVAL+TG   GIG   +  L   GA +A++           AALH        + ++
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            DV  ++         ++HFG+LDILVN A    +   ++     +   ++I+ V     
Sbjct: 65  CDVADQQQLRDTFRKVVDHFGRLDILVNNAG---VNNEKN-----WEKTLQINLVSVISG 116

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
            +  L Y+ K   G      GGIIIN+S+         Q    A+K  +   TRS AL  
Sbjct: 117 TYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA- 170

Query: 188 GTDYA---IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIA 237
             +     +R+N I PG + +TA +  +  EE   +  +Y    K         +   IA
Sbjct: 171 -ANLMNSGVRLNAICPGFV-NTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIA 228

Query: 238 MAALYLASDAAV 249
              + L  D A+
Sbjct: 229 NGLITLIEDDAL 240

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  160 bits (406), Expect = 2e-48
 Identities = 70/241 (29%), Positives = 105/241 (43%), Gaps = 16/241 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
           L GK A +TGG  GIG  I+ +L   GAA+A+         ++ V+ +   G  A+ +  
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D R  E   + +  T+   G LDILVN+A      P E+ +   F  V+ ++    F+  
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAI 148

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
             A ++L  GGR          II I + L     W      SA+KAA+  +T+ LA + 
Sbjct: 149 RSASRHLGDGGR----------IITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDL 198

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
           G    I VN + PG   DT         +      + +A   +GE  DIA    +LA   
Sbjct: 199 GP-RGITVNIVHPGST-DTDMNPAD--GDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQ 254

Query: 248 A 248
            
Sbjct: 255 G 255

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  159 bits (405), Expect = 3e-48
 Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 17/239 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK  L+TG  SGIG        + GA++  + R + +L  AVAA   L   AI +  D
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +    V    +  FG+L  + + A       + +L    +  V+ ++  G+F++  
Sbjct: 61  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           +A + L++GG           ++   +       +   H +A K  V  + R+LALE   
Sbjct: 121 KAGEVLEEGGS----------LVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELAR 169

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              +RVN + PG I  T   + L P     +        + G   ++A AAL+L S+ +
Sbjct: 170 -KGVRVNVLLPGLI-QTPMTAGL-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEES 225

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  158 bits (403), Expect = 4e-48
 Identities = 43/248 (17%), Positives = 87/248 (35%), Gaps = 31/248 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
                 L+TGG  GIG  +   L ++     I    +    +              ++ D
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL---------KFIKAD 52

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           + K++D   V++         D +   A         D+     + V++++   +     
Sbjct: 53  LTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIK 110

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
                LK G            I+   +   + A       + +K A+  +T+SLAL+   
Sbjct: 111 GLENNLKVGAS----------IVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLA- 159

Query: 190 DYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
            Y IRVN + PG +         +  A    ++ +E + +        +  +  +IA   
Sbjct: 160 KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELV 219

Query: 241 LYLASDAA 248
           ++L SD +
Sbjct: 220 IFLLSDKS 227

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  158 bits (401), Expect = 1e-47
 Identities = 55/249 (22%), Positives = 95/249 (38%), Gaps = 32/249 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+ KV ++TG   GIG  I+ +    G+ +  +                       +E D
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECD 54

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +     ++     +G + +LVN A        E +S   +R +I+++  G +    
Sbjct: 55  VTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK 114

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A+ Y+ +             I+NIS+      T        +K AV  +T+S+AL++  
Sbjct: 115 FAIPYMIRSR--------DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP 166

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGEKWDIAMA 239
              +R N + P  I DT  V K A  E+ S                     G+  ++A A
Sbjct: 167 L--LRCNAVCPATI-DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 223

Query: 240 ALYLASDAA 248
             +LAS  A
Sbjct: 224 VAFLASREA 232

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  157 bits (400), Expect = 1e-47
 Identities = 61/248 (24%), Positives = 94/248 (37%), Gaps = 20/248 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKGK AL+TG  SGIG  I+  L + GA I + G        A+A +   G+ A+    D
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPAD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +        +       FG +DILVN A    + P E      +  +I ++    F    
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTR 119

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            AL  ++            G IINI++      +  +    AAK  V  +T+ + LE  T
Sbjct: 120 LALPGMRARN--------WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETAT 171

Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
              +  N I PG +          D A       +       +   +  F     +    
Sbjct: 172 -SNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV 230

Query: 241 LYLASDAA 248
           L+L S+A 
Sbjct: 231 LFLCSEAG 238

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  156 bits (397), Expect = 2e-47
 Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 22/239 (9%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           + AL+TGG  GIG  I+  L   G  +AI  R       ++ A+         L  D+  
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV--------PLPTDLE- 53

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
           ++D   +V+  +   G L +LV+AAA N   PA +LS   +R V+ +     F++   A 
Sbjct: 54  KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALEWGTD 190
            ++ + G G+        ++ I +   +TA         + AK A+  +TR+LA EW   
Sbjct: 114 PHMAEAGWGR--------VLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWA-R 164

Query: 191 YAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
             IRVN + PG + +T     L    E+    T  +   ++    +IA  A  L  D A
Sbjct: 165 LGIRVNLLCPGYV-ETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEA 222

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  156 bits (398), Expect = 3e-47
 Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 20/240 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+VA++TG   GIG  I+ +LG  GA + +  R    LR+    + + G  A     D
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +   +         +   G+ D+LV NA  G F  P   + P  +  +I ++    +++ 
Sbjct: 87  LSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLL 146

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
                 +    RG         IINIS+             +A+K  ++ +  S A E  
Sbjct: 147 RAFAPAMIAAKRGH--------IINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELR 198

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
             + +RV+ +APG +  T     L+ ++    A          E  DIA     LA+ A 
Sbjct: 199 Q-HQVRVSLVAPGSV-RTEFGVGLSAKKSALGA---------IEPDDIADVVALLATQAD 247

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  156 bits (398), Expect = 4e-47
 Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 18/246 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+ KVA++TGG  GIG   +    ++GA + I        +     + S  +    +  D
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHCD 72

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           V K ED   +V++TI   GKLDI+               +     F+ V++I+  G F++
Sbjct: 73  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 132

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALE 186
              A + +             G I+  ++   +TA     HV +A K AV  +T SL  E
Sbjct: 133 AKHAARVMIPAK--------KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTE 184

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALY 242
            G +Y IRVN ++P  +  +  ++ +   +          A           D+A A  Y
Sbjct: 185 LG-EYGIRVNCVSPYIV-ASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAY 242

Query: 243 LASDAA 248
           LA D +
Sbjct: 243 LAGDES 248

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  156 bits (396), Expect = 5e-47
 Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 27/248 (10%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMG--RRKTVLRSAVAALHSLGIPAIGLEGD 69
           GKV L+TG   GIG  I   L        + G  R +  L+         G     + GD
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGD 58

Query: 70  VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           + +     ++V + +   GK+D LV NA     +    ++  N ++ + +I+      + 
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             AL  LKK         + G ++ +S+              ++KAA++    +LA E  
Sbjct: 119 GIALPELKK---------TNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-- 167

Query: 189 TDYAIRVNGIAPGPI--------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
            +  ++   +APG +        ++  G S ++ E+++          +  +    A   
Sbjct: 168 -ERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLK-MFRGLKENNQLLDSSVPATVY 225

Query: 241 LYLASDAA 248
             LA    
Sbjct: 226 AKLALHGI 233

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  156 bits (397), Expect = 6e-47
 Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 10/242 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
               VA++TGG  GIG  I+  L   G  IAI G      +   +A L  LG   I L  
Sbjct: 27  KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRA 86

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           D+         V++ +  FG++D LVN A  A        DL P  F T++ ++  GT  
Sbjct: 87  DLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVF 146

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
                LK +               IINI++      +  ++    +KA + + ++ LAL 
Sbjct: 147 FTQAVLKAMLASDARA-----SRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALR 201

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                 I V  + PG I  +   + ++ +      +  +   ++GE  DI      LA  
Sbjct: 202 LAE-TGIAVFEVRPGII-RSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGG 259

Query: 247 AA 248
             
Sbjct: 260 QF 261

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  156 bits (397), Expect = 6e-47
 Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 29/260 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-------------GRRKTVLRSAVAAL 56
           L+G+VA +TG   G G   ++++   GA I  +                   L   V  +
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 57  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
            +     +    D R  +   +VV+  +   G+LDI+V  A        +D++P  FR V
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV 128

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
           ++I+  GT+         + +GGR       GG II IS+        + IH +A+K AV
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEGGR-------GGSIILISSAAGMKMQPFMIHYTASKHAV 181

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI--------KDTAGVSKLAPEEIRSKATDYMAAY 228
             + R+ A E G  ++IRVN + PGP+          TA    +      S         
Sbjct: 182 TGLARAFAAELGK-HSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD 240

Query: 229 KFGEKWDIAMAALYLASDAA 248
              E  DIA    +LASD +
Sbjct: 241 WVAEPEDIADTVCWLASDES 260

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  155 bits (393), Expect = 1e-46
 Identities = 44/243 (18%), Positives = 70/243 (28%), Gaps = 37/243 (15%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              K  L+ GG   +G E+             +  R+                       
Sbjct: 20  HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIK 67

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
               E+   V+E   +   K+D  V AA G +    + D      + +I+++    F   
Sbjct: 68  DSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASA 127

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
           H   K L +GG            +   A+     T   I   A KAA   I + LA E G
Sbjct: 128 HIGAKLLNQGGL----------FVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENG 177

Query: 189 TD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEKWDIAMAALYLAS 245
                    GI P  + DT    K   +      T    +A               +  +
Sbjct: 178 GLPAGSTSLGILPVTL-DTPTNRKYMSDANFDDWTPLSEVA----------EKLFEWSTN 226

Query: 246 DAA 248
             +
Sbjct: 227 SDS 229

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  156 bits (396), Expect = 1e-46
 Identities = 65/269 (24%), Positives = 103/269 (38%), Gaps = 38/269 (14%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM----------------GRRKTVLRSAV 53
           ++GKVA +TG   G G   +++L + GA I  +                      L    
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 54  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNG 112
             +       +  E DVR  +     V+S +   G+LDI+V NA  GN     +  S   
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED 128

Query: 113 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172
           +  +I+I+  G +      + ++  GGR       GG II  S+     A  +  H  AA
Sbjct: 129 WTEMIDINLAGVWKTVKAGVPHMIAGGR-------GGSIILTSSVGGLKAYPHTGHYVAA 181

Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAA 227
           K  V  + R+  +E G  + IRVN + P  +      +        P+       D    
Sbjct: 182 KHGVVGLMRAFGVELGQ-HMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPI 240

Query: 228 YK--------FGEKWDIAMAALYLASDAA 248
            +        + E  DI+ A L+ ASD A
Sbjct: 241 CQMFHTLPIPWVEPIDISNAVLFFASDEA 269

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  155 bits (394), Expect = 1e-46
 Identities = 48/240 (20%), Positives = 84/240 (35%), Gaps = 20/240 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L     L+TG    +G   +L+L +HG  + I  R +    ++V  L   G  A+ L GD
Sbjct: 25  LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAG--AVALYGD 79

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
                  +  ++        L  +V+  A  +L        + F  +  +  +  +++  
Sbjct: 80  FSCETGIMAFIDLLKTQTSSLRAVVH-NASEWLAETPGEEADNFTRMFSVHMLAPYLINL 138

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
                L               I++IS  +    +   I   A KA ++S+T S A  +  
Sbjct: 139 HCEPLLTASE--------VADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP 190

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV 249
              ++VNGIAP  +              R+ A    A         I  +  YL     V
Sbjct: 191 L--VKVNGIAPALL-MFQP---KDDAAYRANALAKSALGIEPGAEVIYQSLRYLLDSTYV 244

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  154 bits (391), Expect = 2e-46
 Identities = 66/243 (27%), Positives = 101/243 (41%), Gaps = 20/243 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG   GIG  I+ +L   GA + +        ++A A+   +G  A  +  D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAAS---IGKKARAIAAD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +        +        G +DILVN  A            D+  + +R +I+++  GTF
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVN-NASIVPFVAWD---DVDLDHWRKIIDVNLTGTF 116

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
           I+       ++  G+        G +I+I++   +  T       AAK  V   TR+LA 
Sbjct: 117 IVTRAGTDQMRAAGK-------AGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALAT 169

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           E G  Y I  N + PG I ++ GV      E         A    G+   IA    +LAS
Sbjct: 170 ELGK-YNITANAVTPGLI-ESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLAS 227

Query: 246 DAA 248
           D A
Sbjct: 228 DDA 230

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  155 bits (394), Expect = 2e-46
 Identities = 67/252 (26%), Positives = 103/252 (40%), Gaps = 23/252 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL--HSLGIPAIGLE 67
           +  K A++TG  SGIG  I+  L K GA I + G         V            +   
Sbjct: 23  MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHP 82

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            D+ K  +   ++    + FG  DILVN A   F+   ED     +  +I ++   +F  
Sbjct: 83  ADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHT 142

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
              A+  +KK G         G IINI++     A+ ++    AAK  +  +T+++ALE 
Sbjct: 143 IRGAIPPMKKKG--------WGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEV 194

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWDI 236
                + VN I PG +  T  V K  P++ R++                    F     +
Sbjct: 195 AE-SGVTVNSICPGYV-LTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQV 252

Query: 237 AMAALYLASDAA 248
           A  ALYLA D A
Sbjct: 253 ASLALYLAGDDA 264

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  154 bits (391), Expect = 3e-46
 Identities = 69/252 (27%), Positives = 108/252 (42%), Gaps = 21/252 (8%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIGL 66
           +LKGKVA++TG  SGIG  I+  L   GA I + G         V A      G+  +  
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
             D+ K E    +V++ +   G++DILVN A        ED     +  ++ ++    F 
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
               AL ++KK G G+        IINI++     A+  +    AAK  V   T+  ALE
Sbjct: 121 GTAAALPHMKKQGFGR--------IINIASAHGLVASANKSAYVAAKHGVVGFTKVTALE 172

Query: 187 WGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDI 236
                 I  N I PG ++           A  + +  E    +  ++   + +F     +
Sbjct: 173 TAG-QGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231

Query: 237 AMAALYLASDAA 248
              A++LASDAA
Sbjct: 232 GGTAVFLASDAA 243

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  154 bits (391), Expect = 3e-46
 Identities = 66/244 (27%), Positives = 101/244 (41%), Gaps = 19/244 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEG 68
           L+G+  ++TGG  GIG  I+    + GA +A+ GR    + + VA L  LG    IG++ 
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV  R     +    +  FG +D++   A      P   ++P     +  ++  GTF   
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAV 127

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY----QIHVSAAKAAVDSITRSLA 184
              L  L   G G+        ++  S+    T          H  A KAA     R+ A
Sbjct: 128 QACLDALIASGSGR--------VVLTSSI---TGPITGYPGWSHYGATKAAQLGFMRTAA 176

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
           +E    + I VN I PG I  T G+ +   EE  +     + A   G   DI   A +LA
Sbjct: 177 IELAP-HKITVNAIMPGNI-MTEGLLEN-GEEYIASMARSIPAGALGTPEDIGHLAAFLA 233

Query: 245 SDAA 248
           +  A
Sbjct: 234 TKEA 237

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  153 bits (389), Expect = 4e-46
 Identities = 42/237 (17%), Positives = 78/237 (32%), Gaps = 12/237 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            +     + G G  IG EI+ +    G  +    R    L   VA + + G   +    D
Sbjct: 5   PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD 64

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
            R  ++    +    +    L++ +     N   P  + +   FR V E+     F+   
Sbjct: 65  ARNEDEVTAFLN-AADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGR 123

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           E+ + +   G+G+        I    AT            ++AK  + ++ +S+A E   
Sbjct: 124 ESARLMLAHGQGK--------IFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMP 175

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                 + I    + DTA V +   +     A              +A A   L   
Sbjct: 176 KNIHVAHLIIDSGV-DTAWVRERREQMFGKDALANPD--LLMPPAAVAGAYWQLYQQ 229

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  154 bits (391), Expect = 5e-46
 Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 28/259 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-------------GRRKTVLRSAVAAL 56
           L+G+VA +TG   G G   +++L   GA I                      L      +
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72

Query: 57  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
              G  A+    DVR       +V   +  FG+LD++V  A         +L+   + TV
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV 132

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
           I ++  GT+      +  + + G        GG I+ +S++    AT    H SA+K  +
Sbjct: 133 IGVNLTGTWRTLRATVPAMIEAGN-------GGSIVVVSSSAGLKATPGNGHYSASKHGL 185

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIK-------DTAGVSKLAPEEIRSKATDYMAAYK 229
            ++T +LA+E G  Y IRVN I P  ++           +    P  + S     +    
Sbjct: 186 TALTNTLAIELGE-YGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNG 244

Query: 230 FGEKWDIAMAALYLASDAA 248
           F    ++A    +LA D +
Sbjct: 245 FMTADEVADVVAWLAGDGS 263

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  153 bits (389), Expect = 1e-45
 Identities = 61/258 (23%), Positives = 103/258 (39%), Gaps = 24/258 (9%)

Query: 4   PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA 63
           P    + + + A +TG  SGIG  ++  L   G A+    R    + +AV  L + G   
Sbjct: 16  PRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDV 75

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
            G   DV   ++    V + +  FG + ILVN+A  N      DL    +  V++ +  G
Sbjct: 76  DGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTG 135

Query: 124 TFIMCHEALKYL----KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
            F +  E L+         GR          I+NI++T       Y    +A+K  V   
Sbjct: 136 VFRVTREVLRAGGMREAGWGR----------IVNIASTGGKQGVMYAAPYTASKHGVVGF 185

Query: 180 TRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKF 230
           T+S+  E      I VN + PG +         +  A    +  +E+  +    +   ++
Sbjct: 186 TKSVGFELAK-TGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRY 244

Query: 231 GEKWDIAMAALYLASDAA 248
               ++A    YL +DAA
Sbjct: 245 STPEEVAGLVGYLVTDAA 262

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  151 bits (383), Expect = 2e-45
 Identities = 47/242 (19%), Positives = 94/242 (38%), Gaps = 25/242 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           +     ++TG GSG+G  +++ L + G  +++MGRR   L+     L   G   IG+  D
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVAD 57

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   ED      + +   G  +++++ A      P    +    R V+E + V T ++  
Sbjct: 58  LAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQ 117

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           + ++ + +          GG++ N+ ++        +    A+K  +     SL  E   
Sbjct: 118 QTVRLIGER---------GGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELK- 167

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY-LASDAA 248
           D  +R+  + P  I  +         E          +  F    D A   L  L + ++
Sbjct: 168 DSPLRLVNLYPSGI-RS---------EFWDNTDHVDPS-GFMTPEDAAAYMLDALEARSS 216

Query: 249 VH 250
            H
Sbjct: 217 CH 218

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  152 bits (387), Expect = 3e-45
 Identities = 68/265 (25%), Positives = 97/265 (36%), Gaps = 29/265 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM------------GRRKTVLRSAVAALH 57
           ++ KV L+TGG  G G   +++L + GA I +                   L  A   + 
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
             G  A   E DVR R    R + + +  FGKLD++V  A          L    F    
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG--ICPLGAHLPVQAFADAF 125

Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAV 176
           ++D VG     H AL YL  G     + S  G+I                   S AK  V
Sbjct: 126 DVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLV 185

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAY--- 228
           DS T  LA +     +IR N I P  +            +  P+       D + A+   
Sbjct: 186 DSYTLQLAAQLA-PQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAM 244

Query: 229 -----KFGEKWDIAMAALYLASDAA 248
                 + E  DI+ A  +LASD +
Sbjct: 245 QAMPTPYVEASDISNAVCFLASDES 269

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  152 bits (386), Expect = 4e-45
 Identities = 74/246 (30%), Positives = 111/246 (45%), Gaps = 24/246 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL------RSAVAALHSLGIPA 63
           LKGK  L+TGG SGIG  +S+   K GA IAI       L            +   G+  
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAI-----AYLDEEGDANETKQYVEKEGVKC 99

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSV 122
           + L GD+   +    +V+ T+   G L+ILVN  A  +     E ++         I+  
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF 159

Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
             F +   AL +LK+G            IIN ++ + Y      I  SA K A+ + TRS
Sbjct: 160 SYFHVTKAALSHLKQGDV----------IINTASIVAYEGNETLIDYSATKGAIVAFTRS 209

Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
           L+        IRVNG+APGPI  T  +     E+  S+    +   + G+ +++A A +Y
Sbjct: 210 LSQSLV-QKGIRVNGVAPGPI-WTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVY 267

Query: 243 LASDAA 248
           LAS  +
Sbjct: 268 LASSDS 273

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  150 bits (382), Expect = 5e-45
 Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 25/245 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKV +LT    GIG   +L   + GA +      ++ L+         GI    L  D
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP---GIQTRVL--D 58

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V K++     ++   N   +LD+L N A         D     +   + ++    ++M  
Sbjct: 59  VTKKKQ----IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWG 188
             L  +             G IIN+S+          +   S  KAAV  +T+S+A ++ 
Sbjct: 115 AFLPKMLAQK--------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI 166

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
               IR N + PG + DT  + +       PEE R+         +F    +IAM  +YL
Sbjct: 167 QQ-GIRCNCVCPGTV-DTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL 224

Query: 244 ASDAA 248
           ASD +
Sbjct: 225 ASDES 229

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  150 bits (381), Expect = 1e-44
 Identities = 55/255 (21%), Positives = 95/255 (37%), Gaps = 25/255 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           + G+V ++TG   GIG  I+LQL K GA + I GR    LR       SLG   + +  D
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62

Query: 70  VRKREDAVRVVEST-INHFGKLDILVNAAAGNFLV-------PAEDLSPNGFRTVIEIDS 121
             +  +   + E       G+LD+LVN A                +   + +  +  +  
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122

Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSI 179
            G +       + +   G         G+I+ IS   +L Y    + +     KAA D +
Sbjct: 123 RGHYFCSVYGARLMVPAG--------QGLIVVISSPGSLQYM---FNVPYGVGKAACDKL 171

Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEK-WDI 236
               A E    + +    + PG ++       +A EE+        + +A+   E     
Sbjct: 172 AADCAHELR-RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELS 230

Query: 237 AMAALYLASDAAVHR 251
               + LA+D  +  
Sbjct: 231 GKCVVALATDPNILS 245

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  151 bits (383), Expect = 1e-44
 Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 34/265 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM------------GRRKTVLRSAVAALH 57
           ++GKVA +TG   G G   ++ L + GA I  +                  L   V  + 
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTV 116
           +LG   I  + DVR  +     V+  +   G+LDI++ NAA  +       + P  +R +
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM 145

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
           I+++  G +I    A+ ++  G R       GG I+  S+           +  A+K  +
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKR-------GGSIVFTSSIGGLRGAENIGNYIASKHGL 198

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYK-- 229
             + R++ALE G    IRVN + P  +      +        P+       D+  A +  
Sbjct: 199 HGLMRTMALELGP-RNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQM 257

Query: 230 ------FGEKWDIAMAALYLASDAA 248
                 + E  DI+ A L+L SD A
Sbjct: 258 HVLPIPYVEPADISNAILFLVSDDA 282

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  150 bits (380), Expect = 2e-44
 Identities = 60/255 (23%), Positives = 100/255 (39%), Gaps = 30/255 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI--GLE 67
           LKGK AL+TG  +GIG  I+  L   GA + I GRR+  +   +  + +    AI   + 
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            D+   +    V+E     + K+DIL+N       V   D+    +  + E++ +    +
Sbjct: 68  ADLGTEQGCQDVIE----KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRL 123

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
               LK + +   G+        +I I++      +    H SA K    S++RSLA   
Sbjct: 124 TRSYLKKMIERKEGR--------VIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELT 175

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK--------------FGEK 233
                + VN I PG    T GV  +      ++      A K                  
Sbjct: 176 TG-TNVTVNTIMPGST-LTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRP 233

Query: 234 WDIAMAALYLASDAA 248
            +IA    +L+S  +
Sbjct: 234 EEIAHLVTFLSSPLS 248

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  150 bits (380), Expect = 2e-44
 Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 30/255 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              +VAL+TG  SGIG EI+ +LGK G  + +  R +  LR+ +  L   G+ A G   D
Sbjct: 20  QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCD 79

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           VR   +   +V + +  +G +D+LVN A    G       +L+   +  V+E +  G F 
Sbjct: 80  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATA---ELADELWLDVVETNLTGVFR 136

Query: 127 MCHEALKYL----KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
           +  + LK      +  GR          I+NI++T       +    SA+K  V   T++
Sbjct: 137 VTKQVLKAGGMLERGTGR----------IVNIASTGGKQGVVHAAPYSASKHGVVGFTKA 186

Query: 183 LALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
           L LE      I VN + PG +         +  + + +++ EE   + T  +   ++ + 
Sbjct: 187 LGLELAR-TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 245

Query: 234 WDIAMAALYLASDAA 248
            ++A    YL    A
Sbjct: 246 SEVAEMVAYLIGPGA 260

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  149 bits (379), Expect = 2e-44
 Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 23/251 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
           ++GK+A++T G SG+GF  +L+L ++GA + +  R +  L +A + + SL  G     + 
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           GD+R+  D  R+ E      G  DILV +  G       +L    +     + +     +
Sbjct: 65  GDIREPGDIDRLFE-KARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWV 123

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
              A + + + G         G ++ I +             +  +  V  + R+LALE 
Sbjct: 124 GRRAAEQMVEKG--------WGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALEL 175

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLA----------PEEIRSKATDYMAAYKFGEKWDIA 237
                + VN + P  I  T  V  LA           EE        +   + G+  ++A
Sbjct: 176 APH-GVTVNAVLPSLI-LTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELA 233

Query: 238 MAALYLASDAA 248
               +LAS+ A
Sbjct: 234 SVVAFLASEKA 244

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  150 bits (382), Expect = 3e-44
 Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 33/264 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------------LRSAVAALH 57
           L+GKVA +TG   G G   +++L + GA I  +   +              L+  V  + 
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
             G   I  + DVR       VV+  +  FG +DILV+    +       L+   +  ++
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDIL 163

Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
           + + +G +  C   L  + + G+       GG +I +S+T+       Q H +A+K  V 
Sbjct: 164 QTNLIGAWHACRAVLPSMIERGQ-------GGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216

Query: 178 SITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYK--- 229
            +  SLA E G  + IRVN + PG +      +   +    P        D    +    
Sbjct: 217 GLMLSLANEVGR-HNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLT 275

Query: 230 -----FGEKWDIAMAALYLASDAA 248
                + E  D++ A  +LASD A
Sbjct: 276 LLPIPWVEPEDVSNAVAWLASDEA 299

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  149 bits (378), Expect = 3e-44
 Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 22/247 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
              + AL+T G  G+G +++ +L   G ++ +      T + +       +      ++ 
Sbjct: 5   RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQA 64

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAG-----NFLVPAEDLSPNGFRTVIEIDSVG 123
           DV K+ED  ++VE  ++HFGK+D L+N A         LV   D   + +  +I+ +   
Sbjct: 65  DVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLV---DYEEDEWNEMIQGNLTA 121

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAAVDSITR 181
            F +    +  ++K   G+        IIN             Y+   +AAK  + S+T+
Sbjct: 122 VFHLLKLVVPVMRKQNFGR--------IINYGFQGADSAPGWIYRSAFAAAKVGLVSLTK 173

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
           ++A E    Y I  N + PG I           +E R          + G   DIA    
Sbjct: 174 TVAYEEAE-YGITANMVCPGDI-IGEMKEAT-IQEARQLKEHNTPIGRSGTGEDIARTIS 230

Query: 242 YLASDAA 248
           +L  D +
Sbjct: 231 FLCEDDS 237

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  148 bits (377), Expect = 4e-44
 Identities = 59/238 (24%), Positives = 95/238 (39%), Gaps = 25/238 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            + KV ++TG   GIG  +          +    R         +A          + GD
Sbjct: 26  NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR-----SIKPSA----DPDIHTVAGD 76

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           + K E A R+V   I  FG++D LVN A      P  +++   +   + ++  G F +  
Sbjct: 77  ISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQ 136

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSITRSLALEW 187
            A   + K G         G I++I+ +L             S  K  ++++TRSLA+E+
Sbjct: 137 RAAAEMLKQG--------SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEF 188

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
                +RVN ++PG I  T     + P E  S         + GE  D+  A LYL  
Sbjct: 189 S-RSGVRVNAVSPGVI-KTP----MHPAETHSTLAGLHPVGRMGEIRDVVDAVLYLEH 240

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  148 bits (376), Expect = 5e-44
 Identities = 45/242 (18%), Positives = 78/242 (32%), Gaps = 18/242 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
           L  K  +      GIG + S +L K      ++  R     +          +       
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 69  DV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           DV     ++ ++++   +    +DIL+N A    ++             I I+  G    
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAG---ILDDHQ-----IERTIAINFTGLVNT 114

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
               L +  K   G      GGII NI +   + A       SA+KAAV S T SLA   
Sbjct: 115 TTAILDFWDKRKGG-----PGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                +    I PG    T  V    +  ++  +  + + ++            +     
Sbjct: 170 PI-TGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA 227

Query: 247 AA 248
             
Sbjct: 228 NK 229

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  148 bits (376), Expect = 5e-44
 Identities = 39/243 (16%), Positives = 83/243 (34%), Gaps = 22/243 (9%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
             A++T      G   +L+L + G  +A             A            +     
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA------ETYPQLKPMS 55

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
            ++   ++E+  + +G++D+LV+         P +  +   +R  +E   +  F + +  
Sbjct: 56  EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
              +KK   G         II I++   +         ++A+A   ++  +L+ E G  Y
Sbjct: 116 ASQMKKRKSGH--------IIFITSATPFGPWKELSTYTSARAGACTLANALSKELGE-Y 166

Query: 192 AIRVNGIAPGPI------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
            I V  I P  +                  E  +      A  + G + ++     +LAS
Sbjct: 167 NIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLAS 226

Query: 246 DAA 248
            + 
Sbjct: 227 GSC 229

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  148 bits (375), Expect = 7e-44
 Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 23/242 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGL 66
            +  +A++TG   GIG  I+  L   G  + ++ R K  L      +          I L
Sbjct: 5   KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
             D+     A   ++     +G +DILVN AA  F+  +     + FR ++EI+ +  + 
Sbjct: 65  PLDITDCTKADTEIKDIHQKYGAVDILVN-AAAMFMDGSLSEPVDNFRKIMEINVIAQYG 123

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +     + +K    G         I N+++              + K A+  +  SL  E
Sbjct: 124 ILKTVTEIMKVQKNGY--------IFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRE 175

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                 IRV  + PG + +T         ++  KA       +  +  D+      L + 
Sbjct: 176 LA-PLGIRVTTLCPGWV-NT---------DMAKKAGTPFKDEEMIQPDDLLNTIRCLLNL 224

Query: 247 AA 248
           + 
Sbjct: 225 SE 226

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  148 bits (377), Expect = 8e-44
 Identities = 67/248 (27%), Positives = 97/248 (39%), Gaps = 27/248 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
           L  +  L+TGG  GIG  I+    + GA +A+  R    L S  A L        IG+  
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
           DV           + ++ FG LD++    AG      L     ++P     V++++  GT
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCA-NAGIFPEARLD---TMTPEQLSEVLDVNVKGT 154

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY----QIHVSAAKAAVDSIT 180
                  L  L   GRG+        +I  S+    T          H  A+KAA     
Sbjct: 155 VYTVQACLAPLTASGRGR--------VILTSSI---TGPVTGYPGWSHYGASKAAQLGFM 203

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           R+ A+E      + VN I PG I  T G+  +  EE  S     +     G   DI   A
Sbjct: 204 RTAAIELAP-RGVTVNAILPGNI-LTEGLVDM-GEEYISGMARSIPMGMLGSPVDIGHLA 260

Query: 241 LYLASDAA 248
            +LA+D A
Sbjct: 261 AFLATDEA 268

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  147 bits (372), Expect = 1e-43
 Identities = 39/241 (16%), Positives = 68/241 (28%), Gaps = 30/241 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            + +  L+ GG   +G             +A +   +    SA           + +   
Sbjct: 5   GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVI--------VKMTDS 56

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
             ++ D V      +    K+D ++  A G                 + +     + I  
Sbjct: 57  FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 116

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW- 187
           H A K+LK+GG           +    A      T   I    AK AV  + +SLA +  
Sbjct: 117 HLATKHLKEGGL----------LTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNS 166

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
           G         + P  + DT    K  PE   S          +     +        +  
Sbjct: 167 GMPSGAAAIAVLPVTL-DTPMNRKSMPEADFS---------SWTPLEFLVETFHDWITGN 216

Query: 248 A 248
            
Sbjct: 217 K 217

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  147 bits (374), Expect = 1e-43
 Identities = 53/256 (20%), Positives = 97/256 (37%), Gaps = 24/256 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSL-GIPAIGLE 67
            +   A++TGG   IG  I+++L + G  + +  R  +   +  VA L++     A+  +
Sbjct: 9   SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCK 68

Query: 68  GDVRKREDAV----RVVESTINHFGKLDILVNAA-----------AGNFLVPAEDLSPNG 112
           GD+      +     +++ +   FG+ D+LVN A                          
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128

Query: 113 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172
              +   ++V    +     +   +GG  ++ + S   ++N+   +           + A
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLS---VVNLCDAMTDLPLPGFCVYTMA 185

Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
           K A+  +TR+ ALE      IRVN +APG       + +   EE R K            
Sbjct: 186 KHALGGLTRAAALELA-PRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV---PLGQSEAS 241

Query: 233 KWDIAMAALYLASDAA 248
              IA A  +L S  A
Sbjct: 242 AAQIADAIAFLVSKDA 257

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  148 bits (375), Expect = 1e-43
 Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 11/206 (5%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           +   F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG
Sbjct: 17  LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 76

Query: 61  -IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
              A  + G +     A + V       G LD+L+     N  +       +  R  +E+
Sbjct: 77  AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 136

Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
           + +   ++   AL  LK+           G I+ +S+     A       SA+K A+D  
Sbjct: 137 NFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 187

Query: 180 TRSLALEWGTD-YAIRVNGIAPGPIK 204
             S+  E+      + +     G I 
Sbjct: 188 FSSIRKEYSVSRVNVSITLCVLGLID 213

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  146 bits (371), Expect = 4e-43
 Identities = 63/263 (23%), Positives = 100/263 (38%), Gaps = 36/263 (13%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM------------GRRKTVLRSAVAALH 57
           L GKVA +TG   G G   +++L   GA I  +                  L + V  + 
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
            +G   +  + DVR RE     +++ ++  G+LDI+V  A     +       +G+  VI
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAG----IAPMSAGDDGWHDVI 126

Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL----HYTATWYQIHVSAAK 173
           +++  G +     A+  L K G        GG I+ IS++       +A    +   AAK
Sbjct: 127 DVNLTGVYHTIKVAIPTLVKQGT-------GGSIVLISSSAGLAGVGSADPGSVGYVAAK 179

Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAY 228
             V  + R  A        IRVN I P  +      +      LA     +     M   
Sbjct: 180 HGVVGLMRVYANLLAG-QMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA 238

Query: 229 ---KFGEKWDIAMAALYLASDAA 248
              +     D+A A  +L SD A
Sbjct: 239 MPVEVLAPEDVANAVAWLVSDQA 261

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  145 bits (368), Expect = 6e-43
 Identities = 53/249 (21%), Positives = 92/249 (36%), Gaps = 27/249 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             GK   +TG G GIG+  +L   + GA +    +          A      P      D
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ----------AFTQEQYPFATEVMD 54

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V       +V +  +    +LD LVNAA    +   + LS   ++    ++  G F +  
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQ 114

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           + +   ++          GG I+ +++   +T         A+KAA+ S+  S+ LE   
Sbjct: 115 QTMNQFRRQR--------GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAG 166

Query: 190 DYAIRVNGIAPGPIK--------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
              +R N ++PG            +    +        +    +   K     +IA   L
Sbjct: 167 -SGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTIL 225

Query: 242 YLASDAAVH 250
           +LASD A H
Sbjct: 226 FLASDLASH 234

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  144 bits (367), Expect = 9e-43
 Identities = 73/246 (29%), Positives = 108/246 (43%), Gaps = 18/246 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
           LKGKVAL+TG   GIG  I+ +L   GA +AI  G RK      V  + S G  A  +  
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64

Query: 69  DVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
           ++        +  S  N         K DIL+N A        E+ +   F  ++ +++ 
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAK 124

Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
             F +  +AL  L+   R          IINIS+     +    I  S  K A++++T +
Sbjct: 125 APFFIIQQALSRLRDNSR----------IINISSAATRISLPDFIAYSMTKGAINTMTFT 174

Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
           LA + G    I VN I PG +K       L+   ++  AT   A  + GE  DIA  A +
Sbjct: 175 LAKQLG-ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAF 233

Query: 243 LASDAA 248
           LAS  +
Sbjct: 234 LASPDS 239

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  145 bits (369), Expect = 1e-42
 Identities = 54/260 (20%), Positives = 98/260 (37%), Gaps = 24/260 (9%)

Query: 6   KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPA 63
           +G  ++   A++TG    IG  I+++L + G  + I          ++A          A
Sbjct: 17  RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTA 76

Query: 64  IGLEGDVRKRE----DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS---------- 109
           +  + D+            ++ S    FG+ D+LVN A+  +  P               
Sbjct: 77  VVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTV 136

Query: 110 PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169
                 +I  +++  F++     +  K        +SS   I+N+   +           
Sbjct: 137 ETQVAELIGTNAIAPFLLTMSFAQRQKG--TNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194

Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229
           +  K A+  +T+S ALE    Y IRVNG+APG       +     EE + K    +   +
Sbjct: 195 NMGKHALVGLTQSAALELA-PYGIRVNGVAPGVSLLPVAM----GEEEKDKWRRKVPLGR 249

Query: 230 F-GEKWDIAMAALYLASDAA 248
                  IA A ++L S +A
Sbjct: 250 REASAEQIADAVIFLVSGSA 269

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  143 bits (362), Expect = 1e-41
 Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 23/245 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            + KVAL+TG G GIG EI+  L K  + +  + R +    S V  + S G  + G  GD
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 101

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
           V K+E+   V+   +     +DILVN  AG    N  +    +  + +  V+  +    F
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVN-NAGITRDNLFL---RMKNDEWEDVLRTNLNSLF 157

Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
            +     K +   + GR          IINIS+ +  T    Q + S++KA V   T+SL
Sbjct: 158 YITQPISKRMINNRYGR----------IINISSIVGLTGNVGQANYSSSKAGVIGFTKSL 207

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           A E  +   I VN IAPG I  +    K+  E+I+      + A + G   ++A  A +L
Sbjct: 208 AKELAS-RNITVNAIAPGFI-SSDMTDKI-SEQIKKNIISNIPAGRMGTPEEVANLACFL 264

Query: 244 ASDAA 248
           +SD +
Sbjct: 265 SSDKS 269

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  142 bits (360), Expect = 2e-41
 Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 23/245 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L  +VA++TG   GIG  I+L+L + GA +      +       AA    G+   G   +
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN 85

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
           V        +VEST+  FG L++LVN  AG       +    +  + +  VI+ +    F
Sbjct: 86  VNDATAVDALVESTLKEFGALNVLVN-NAGITQDQLAM---RMKDDEWDAVIDTNLKAVF 141

Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
            +    L+ +   +GGR          I+NI++ +       Q++ +AAKA V  +TR+L
Sbjct: 142 RLSRAVLRPMMKARGGR----------IVNITSVVGSAGNPGQVNYAAAKAGVAGMTRAL 191

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           A E G+   I VN +APG I DT     L P+E ++     +   + G   DIA A  +L
Sbjct: 192 AREIGS-RGITVNCVAPGFI-DTDMTKGL-PQEQQTALKTQIPLGRLGSPEDIAHAVAFL 248

Query: 244 ASDAA 248
           AS  A
Sbjct: 249 ASPQA 253

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  141 bits (357), Expect = 3e-41
 Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 24/246 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
           LKGK A++TG   G+G  I+ +LG  GA I + G    T L +      + GI  +  +G
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
           DV+  ED   +V++ ++ FG++DILVN  AG      ++    +S   +  V+  +    
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVN-NAGITRDTLML---KMSEKDWDDVLNTNLKSA 118

Query: 125 FIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
           ++      K +  +K G+          IINI++         Q + +A+KA +   T+S
Sbjct: 119 YLCTKAVSKIMLKQKSGK----------IINITSIAGIIGNAGQANYAASKAGLIGFTKS 168

Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
           +A E+     I  N +APG I  T     L P++++    + +   +FG   ++A    +
Sbjct: 169 IAKEFAA-KGIYCNAVAPGII-KTDMTDVL-PDKVKEMYLNNIPLKRFGTPEEVANVVGF 225

Query: 243 LASDAA 248
           LASD +
Sbjct: 226 LASDDS 231

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  141 bits (357), Expect = 6e-41
 Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 34/264 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------------LRSAVAALH 57
            +GK AL+TGG  G+G   ++ L + GA IAI  R +              L   VA + 
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 58  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
             G   I  + DV+ R      V    +  G +DI +  A  + +    ++    +  VI
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVI 127

Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
             +  GTF         + K           G I+ +S+ L ++A + Q    ++K  V 
Sbjct: 128 GTNLTGTFNTIAAVAPGMIKRN--------YGRIVTVSSMLGHSANFAQASYVSSKWGVI 179

Query: 178 SITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAY---- 228
            +T+  A +    Y I VN +APG I      +      + P+  +    D  + +    
Sbjct: 180 GLTKCAAHDLVG-YGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLH 238

Query: 229 ----KFGEKWDIAMAALYLASDAA 248
                F +  ++  A L+L  +A+
Sbjct: 239 LQYAPFLKPEEVTRAVLFLVDEAS 262

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  139 bits (354), Expect = 7e-41
 Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 24/247 (9%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLE 67
           +   K AL+TG   GIG  I+LQL + G  +A+     K    + V  + + G+ +  ++
Sbjct: 1   MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ 60

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVG 123
            +V   ++   +++  ++ FG LD+LVN  AG    N L+    +    +  VI+ +  G
Sbjct: 61  ANVADADEVKAMIKEVVSQFGSLDVLVN-NAGITRDNLLM---RMKEQEWDDVIDTNLKG 116

Query: 124 TFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
            F    +A   +  ++ G           IIN+S+ +       Q +  A KA V  +T+
Sbjct: 117 VFNCIQKATPQMLRQRSGA----------IINLSSVVGAVGNPGQANYVATKAGVIGLTK 166

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
           S A E  +   I VN +APG I  +     L  +E++ +    +   +FG+  DIA    
Sbjct: 167 SAARELAS-RGITVNAVAPGFI-VSDMTDAL-SDELKEQMLTQIPLARFGQDTDIANTVA 223

Query: 242 YLASDAA 248
           +LASD A
Sbjct: 224 FLASDKA 230

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  139 bits (354), Expect = 7e-41
 Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 24/247 (9%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLE 67
           +LKGKVAL+TG   GIG  I++ L K GA + +     +      V  +  LG  AI + 
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVG 123
            DV   ED   +V+ T++ FG++DILVN  AG    N L+    +    + TVI  +  G
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVN-NAGVTKDNLLM---RMKEEEWDTVINTNLKG 116

Query: 124 TFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
            F+      +++  ++ GR          I+NI++ +  T    Q +  AAKA V  +T+
Sbjct: 117 VFLCTKAVSRFMMRQRHGR----------IVNIASVVGVTGNPGQANYVAAKAGVIGLTK 166

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
           + A E  +   I VN IAPG I  T     L  E I+++    + A +FGE  DIA A  
Sbjct: 167 TSAKELAS-RNITVNAIAPGFI-ATDMTDVL-DENIKAEMLKLIPAAQFGEAQDIANAVT 223

Query: 242 YLASDAA 248
           + ASD +
Sbjct: 224 FFASDQS 230

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  139 bits (353), Expect = 9e-41
 Identities = 42/243 (17%), Positives = 81/243 (33%), Gaps = 27/243 (11%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIG 65
            + L+TG G GIG  I+L+  +           + +  R    L        + G     
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +  D+    D  R+    +  +G +D LVN A         DL+   F   +  +  GTF
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            +       +++   G         I  I++     A  +      +K     +  ++ L
Sbjct: 123 FLTQALFALMERQHSGH--------IFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRL 174

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
                  +R+  + PG +  T    K+  +E+++               DIA   +    
Sbjct: 175 YAR-KCNVRITDVQPGAV-YTPMWGKV-DDEMQALM---------MMPEDIAAPVVQAYL 222

Query: 246 DAA 248
             +
Sbjct: 223 QPS 225

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  139 bits (352), Expect = 2e-40
 Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 23/245 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L  KVAL+TG   GIGFE++  L   GA +      +        ++   G  A GL  +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +   E               +DILVN  AG    N ++    +S + +++VI  +    F
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVN-NAGITRDNLMM---RMSEDEWQSVINTNLSSIF 118

Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
            M  E ++ +  K+ GR          II+I + +       Q +  AAKA V   ++SL
Sbjct: 119 RMSKECVRGMMKKRWGR----------IISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSL 168

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           A E  +   I VN +APG I  T    KL  +E +S     + + + GE  DIA A  +L
Sbjct: 169 AYEVAS-RNITVNVVAPGFI-ATDMTDKL-TDEQKSFIATKIPSGQIGEPKDIAAAVAFL 225

Query: 244 ASDAA 248
           AS+ A
Sbjct: 226 ASEEA 230

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  138 bits (350), Expect = 4e-40
 Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 26/251 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP------- 62
           L+  +AL+TG GSGIG  +S++L   GA +A     +   +  V  L   G         
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64

Query: 63  AIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAG----NFLVPAEDLSPNGFRTVI 117
               + DV +   A  ++E     F +   ++V+  AG     FL+    +S + +  VI
Sbjct: 65  HAAFQADVSEARAARCLLEQVQACFSRPPSVVVS-CAGITQDEFLL---HMSEDDWDKVI 120

Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
            ++  GTF++   A + L   G         G IINIS+ +       Q + +A+KA V 
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGC-------RGSIINISSIVGKVGNVGQTNYAASKAGVI 173

Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
            +T++ A E G  + IR N + PG I  T    K+ P+++  K T+ +     G+  D+A
Sbjct: 174 GLTQTAARELGR-HGIRCNSVLPGFI-ATPMTQKV-PQKVVDKITEMIPMGHLGDPEDVA 230

Query: 238 MAALYLASDAA 248
               +LAS+ +
Sbjct: 231 DVVAFLASEDS 241

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  137 bits (348), Expect = 7e-40
 Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 24/246 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
           L+GKV+L+TG   GIG  I+ +L   G+ + I G      ++    + +  G+ A G+E 
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
           ++   E   +  E   N    +DILVN  AG       +    +S   +  V++++  GT
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVN-NAGITRDKLFL---RMSLLDWEEVLKVNLTGT 120

Query: 125 FIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
           F++   +L+ +  ++ GR          I+NIS+ + +T    Q++ S  KA +   T+S
Sbjct: 121 FLVTQNSLRKMIKQRWGR----------IVNISSVVGFTGNVGQVNYSTTKAGLIGFTKS 170

Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
           LA E      + VN +APG I +T   + L  EEI+ K  + +   +FG   ++A   L+
Sbjct: 171 LAKELAP-RNVLVNAVAPGFI-ETDMTAVL-SEEIKQKYKEQIPLGRFGSPEEVANVVLF 227

Query: 243 LASDAA 248
           L S+ A
Sbjct: 228 LCSELA 233

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  136 bits (346), Expect = 9e-40
 Identities = 71/253 (28%), Positives = 113/253 (44%), Gaps = 45/253 (17%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K  L+TG   GIG        K GA +      +  LR A        + A  +  D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE-----AVGAHPVVMD 57

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLV--PAEDLSPNGFRTVIEIDSVG 123
           V       R     + H G+LD +V+  AG    NF    P ED     +  V+ ++  G
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVH-YAGITRDNFHWKMPLED-----WELVLRVNLTG 111

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH--------YTATWYQIHVSAAKAA 175
           +F++   A + +++   G         I+  ++ ++        Y         +A+ A 
Sbjct: 112 SFLVAKAASEAMREKNPGS--------IVLTASRVYLGNLGQANY---------AASMAG 154

Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
           V  +TR+LALE G  + IRVN +APG I +T   +K+ PE++R KA       + G+  +
Sbjct: 155 VVGLTRTLALELGR-WGIRVNTLAPGFI-ETRMTAKV-PEKVREKAIAATPLGRAGKPLE 211

Query: 236 IAMAALYLASDAA 248
           +A AAL+L SD +
Sbjct: 212 VAYAALFLLSDES 224

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  137 bits (348), Expect = 1e-39
 Identities = 43/273 (15%), Positives = 86/273 (31%), Gaps = 41/273 (15%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-------------------MGRRKTVLR 50
               VAL+TG    +G  I+  L   G A+ +                          ++
Sbjct: 7   PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 66

Query: 51  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN--------------A 96
           + ++ + +  +        V        +V +   H+G+ D+LVN               
Sbjct: 67  ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 126

Query: 97  AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156
                 V   +        +   +++  + +       +           +   IIN+  
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG--TPAKHRGTNYSIINMVD 184

Query: 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216
            +           + AK A++ +TRS ALE      IRVNG+ PG       +    P  
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDDM----PPA 239

Query: 217 IRSKATDYMAAYK-FGEKWDIAMAALYLASDAA 248
           +       +  Y+      +++   ++L S  A
Sbjct: 240 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKA 272

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  138 bits (350), Expect = 2e-39
 Identities = 44/273 (16%), Positives = 87/273 (31%), Gaps = 41/273 (15%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-------------------MGRRKTVLR 50
               VAL+TG    +G  I+  L   G A+ +                          ++
Sbjct: 44  PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 103

Query: 51  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA------------- 97
           + ++ + +  +        V        +V +   H+G+ D+LVN A             
Sbjct: 104 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 163

Query: 98  -AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156
                 V   +        +   +++  + +       +           +   IIN+  
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG--TPAKHRGTNYSIINMVD 221

Query: 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216
            +           + AK A++ +TRS ALE      IRVNG+ PG       +    P  
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDDM----PPA 276

Query: 217 IRSKATDYMAAYK-FGEKWDIAMAALYLASDAA 248
           +       +  Y+      +++   ++L S  A
Sbjct: 277 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKA 309

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  136 bits (345), Expect = 2e-39
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 26/245 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG   GIG  I+  L + GA +      ++  ++       LG    G+  +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDY---LGDNGKGMALN 63

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
           V   E    V+++  + FG +DILVN  AG    N L+    +    +  ++E +    F
Sbjct: 64  VTNPESIEAVLKAITDEFGGVDILVN-NAGITRDNLLM---RMKEEEWSDIMETNLTSIF 119

Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
            +    L+ +  K+ GR          IIN+ + +       Q + +AAKA V   T+S+
Sbjct: 120 RLSKAVLRGMMKKRQGR----------IINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 169

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           A E  +   + VN +APG I +T     L  +E R+     + A + G+  +IA A  +L
Sbjct: 170 AREVAS-RGVTVNTVAPGFI-ETDMTKAL-NDEQRTATLAQVPAGRLGDPREIASAVAFL 226

Query: 244 ASDAA 248
           AS  A
Sbjct: 227 ASPEA 231

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  133 bits (338), Expect = 3e-38
 Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 26/245 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+ AL+TG   GIG  I+      GA + + G R+  L+   A    LG        +
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---LGKDVFVFSAN 81

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +  R+   ++ E        +DILVN  AG       V    +    +  V+ ++     
Sbjct: 82  LSDRKSIKQLAEVAEREMEGIDILVN-NAGITRDGLFV---RMQDQDWDDVLAVNLTAAS 137

Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
            +  E +  +  ++ GR          IINI++ +       Q +  AAKA +   +++L
Sbjct: 138 TLTRELIHSMMRRRYGR----------IINITSIVGVVGNPGQTNYCAAKAGLIGFSKAL 187

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           A E  +   I VN IAPG I  +A   KL  E+ +      +   + G   +IA A +YL
Sbjct: 188 AQEIAS-RNITVNCIAPGFI-KSAMTDKL-NEKQKEAIMAMIPMKRMGIGEEIAFATVYL 244

Query: 244 ASDAA 248
           ASD A
Sbjct: 245 ASDEA 249

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  132 bits (335), Expect = 3e-38
 Identities = 45/243 (18%), Positives = 75/243 (30%), Gaps = 34/243 (13%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           +     ++ GG   +G  I     K+G  +  +              +      I ++G+
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA----------NDQADSNILVDGN 50

Query: 70  VRKREDAVRVVESTIN--HFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFI 126
               E    ++E T +     ++D +   A G     A           +I+     + I
Sbjct: 51  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
               A  +LK GG           +    A      T   I    AKAAV  +T SLA +
Sbjct: 111 AAKLATTHLKPGGL----------LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAK 160

Query: 187 W-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
             G      V  I P  + DT    K  P    S          +     I+   L   +
Sbjct: 161 DSGLPDNSAVLTIMPVTL-DTPMNRKWMPNADHS---------SWTPLSFISEHLLKWTT 210

Query: 246 DAA 248
           + +
Sbjct: 211 ETS 213

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  133 bits (337), Expect = 3e-38
 Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 20/244 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           +  ++A +TGG  GIG  I  +L K G  +    G         +    +LG      EG
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEG 70

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
           +V   +   +  +      G++D+LVN  AG            ++   ++ VI+ +    
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVN-NAGITRDVVFR---KMTREDWQAVIDTNLTSL 126

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           F +  + +  + + G G+        IINIS+       + Q + S AKA +   T SLA
Sbjct: 127 FNVTKQVIDGMVERGWGR--------IINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLA 178

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
            E  T   + VN ++PG I  T  V  +   ++  K    +   + G   +I     +LA
Sbjct: 179 QEVAT-KGVTVNTVSPGYI-GTDMVKAI-RPDVLEKIVATIPVRRLGSPDEIGSIVAWLA 235

Query: 245 SDAA 248
           S+ +
Sbjct: 236 SEES 239

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  132 bits (335), Expect = 5e-38
 Identities = 41/245 (16%), Positives = 77/245 (31%), Gaps = 23/245 (9%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
            V  +TG  SGIG  +   L + G  +  + R +       A L + G     +   + +
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQA---DIEADLSTPGGRETAVAAVLDR 58

Query: 73  REDAVRVV-----ESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTF 125
               +  +              L + VN    + L+    E LS       + + S+   
Sbjct: 59  CGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT 118

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
                 L  ++            G                 +  + +K AV  + R   +
Sbjct: 119 QPGAAELPMVEAML--------AGDEARAIELAEQQG-QTHLAYAGSKYAVTCLARRNVV 169

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           +W     +R+N +APG + +T  +      P    S         +  E  ++A A  +L
Sbjct: 170 DWA-GRGVRLNVVAPGAV-ETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFL 227

Query: 244 ASDAA 248
               A
Sbjct: 228 LGPQA 232

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  132 bits (335), Expect = 7e-38
 Identities = 71/246 (28%), Positives = 123/246 (50%), Gaps = 27/246 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
           L  ++AL+TG   GIG  I+L+L   GA +A+            VAA+ + G  A  ++ 
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
           DV +  +   +  + I  +G+LD+LVN  AG      L+    +  + +++V++++  G 
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVN-NAGITRDTLLL---RMKRDDWQSVLDLNLGGV 141

Query: 125 FIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
           F+    A K +  ++ GR          IINI++ +       Q + SAAKA V  +T++
Sbjct: 142 FLCSRAAAKIMLKQRSGR----------IINIASVVGEMGNPGQANYSAAKAGVIGLTKT 191

Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
           +A E  +   I VN +APG I  T   S+LA E++       +   ++GE  ++A    +
Sbjct: 192 VAKELAS-RGITVNAVAPGFI-ATDMTSELAAEKLLEV----IPLGRYGEAAEVAGVVRF 245

Query: 243 LASDAA 248
           LA+D A
Sbjct: 246 LAADPA 251

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  131 bits (332), Expect = 2e-37
 Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 19/247 (7%)

Query: 7   GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIG 65
           G +   +VA +TGG  G+G  IS +L   G A+A+    R   + + +      G     
Sbjct: 20  GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKA 79

Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDS 121
              DV   E   R  E  +  FGK+D+L+N  AG       +    ++   +  V+  D 
Sbjct: 80  YAVDVADFESCERCAEKVLADFGKVDVLIN-NAGITRDATFM---KMTKGDWDAVMRTDL 135

Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
              F +  + +  + +   G+        I+NI +       + Q + ++AKA +   T+
Sbjct: 136 DAMFNVTKQFIAGMVERRFGR--------IVNIGSVNGSRGAFGQANYASAKAGIHGFTK 187

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
           +LALE      I VN ++PG +  TA V  +  + + +K    +   + G   ++A    
Sbjct: 188 TLALETAK-RGITVNTVSPGYL-ATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIA 245

Query: 242 YLASDAA 248
           +L SD A
Sbjct: 246 FLCSDDA 252

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  130 bits (330), Expect = 3e-37
 Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 25/239 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           ++ K  L+     GIG  ++  L + GA + I  R + +L+ +             +  D
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 67

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +RK       ++       ++DILV  A G      ++L+   F+  I+   +    +  
Sbjct: 68  LRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 121

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             L  +K+ G G+        I+ I++    +        ++A+ A+    ++L+ E   
Sbjct: 122 NYLPAMKEKGWGR--------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP 173

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            Y I VN +APG   +T  V +L  EE + +    +   +  +  +IA    +L S+ A
Sbjct: 174 -YGITVNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKA 230

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  129 bits (327), Expect = 9e-37
 Identities = 46/255 (18%), Positives = 82/255 (32%), Gaps = 26/255 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSL--GIPAI 64
           L   V +LTG   G G  ++ QL +    G+ + +  R +++LR     L +    +  +
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63

Query: 65  GLEGDVRKREDAVRVVESTIN----HFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVI 117
               D+       R++ +          +  +L+N AA                      
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
            ++      +    L   +              ++NIS+              A KAA D
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSP------GLSKTVVNISSLCALQPYKGWGLYCAGKAARD 177

Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDT----AGVSKLAPEEIRSKATDYMAAYKFGEK 233
            + + LA E   + ++RV   APGP+ D              E+RSK     +     + 
Sbjct: 178 MLYQVLAAE---EPSVRVLSYAPGPL-DNDMQQLARETSKDPELRSKLQKLKSDGALVDC 233

Query: 234 WDIAMAALYLASDAA 248
              A   L L     
Sbjct: 234 GTSAQKLLGLLQKDT 248

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  129 bits (326), Expect = 1e-36
 Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 25/244 (10%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
            V ++TG   GIG  I+L LGK G  + +   R           + + G  AI   GDV 
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           K  D   ++++ I+ +G +D++VN  AG      L+    +  + +  VI+++  G F+ 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVN-NAGITRDTLLI---RMKKSQWDEVIDLNLTGVFLC 117

Query: 128 CHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
              A K +  K+ GR          IINI++ +       Q + +AAKA V   +++ A 
Sbjct: 118 TQAATKIMMKKRKGR----------IINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAR 167

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA- 244
           E  +   I VN + PG I  +   +KL  E++  K    +   + G+  ++A    +LA 
Sbjct: 168 EGAS-RNINVNVVCPGFI-ASDMTAKL-GEDMEKKILGTIPLGRTGQPENVAGLVEFLAL 224

Query: 245 SDAA 248
           S AA
Sbjct: 225 SPAA 228

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  128 bits (325), Expect = 1e-36
 Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 25/244 (10%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIG-LEGDV 70
           + AL+TG   GIG  I+L+L + G A+AI  G+ +             G P +  L  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTFI 126
            + E A  +V       G LD LVN  AG      LV    +    +  V+E +    F 
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVN-NAGITRDTLLV---RMKDEDWEAVLEANLSAVFR 117

Query: 127 MCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
              EA+K +   + GR          I+NI++ +       Q +  A+KA +   TR++A
Sbjct: 118 TTREAVKLMMKARFGR----------IVNITSVVGILGNPGQANYVASKAGLIGFTRAVA 167

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
            E+     I VN +APG I +T    +L P+E++      + A +FG   ++A A  +L 
Sbjct: 168 KEYAQ-RGITVNAVAPGFI-ETEMTERL-PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLV 224

Query: 245 SDAA 248
           S+ A
Sbjct: 225 SEKA 228

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  128 bits (324), Expect = 3e-36
 Identities = 74/245 (30%), Positives = 111/245 (45%), Gaps = 30/245 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK +L+TG  SGIG  I+  L K G+ + I G  +  L+S   A   L         +
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA---LKDNYTIEVCN 68

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +  +E+      + I+    LDILV   AG       +    +    F  VI+I+    F
Sbjct: 69  LANKEE----CSNLISKTSNLDILVC-NAGITSDTLAI---RMKDQDFDKVIDINLKANF 120

Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
           I+  EA+K +  K+ GR          IINIS+ +       Q +  A+KA +  +T+SL
Sbjct: 121 ILNREAIKKMIQKRYGR----------IINISSIVGIAGNPGQANYCASKAGLIGMTKSL 170

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           + E  T   I VN +APG I  +    KL  E+ R      +    +G   D+A A  +L
Sbjct: 171 SYEVAT-RGITVNAVAPGFI-KSDMTDKL-NEKQREAIVQKIPLGTYGIPEDVAYAVAFL 227

Query: 244 ASDAA 248
           AS+ A
Sbjct: 228 ASNNA 232

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  128 bits (324), Expect = 4e-36
 Identities = 49/242 (20%), Positives = 90/242 (37%), Gaps = 12/242 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            +G  A+++GG  G+G     +L   G  + I        ++       LG  A  +  +
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTN 84

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSP---NGFRTVIEIDSVGT 124
           V   +  +  +E+          +V          +   D SP    GF   I++   GT
Sbjct: 85  VTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGT 144

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
           + +       +         +   G ++  ++   Y     Q   +AAKA V  +T + A
Sbjct: 145 YNVARLVAASIAA--AEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAA 202

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
            +      IRVN IAPG +  T  +  +  E +   A +     + G   + A AA +L 
Sbjct: 203 RDLS-SAGIRVNTIAPGTM-KTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLL 260

Query: 245 SD 246
           ++
Sbjct: 261 TN 262

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  128 bits (324), Expect = 6e-36
 Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 8/195 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             G+ A++TGG SGIG   + +  + GA + +    +  L  AV  L   G  A G+  D
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           VR  ++ VR+ +      G +D++ + A      P   ++ + +R VI+ID  G+     
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVE 148

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             L  L + G        GG I   ++               AK  V  +  +LA E   
Sbjct: 149 AFLPRLLEQGT-------GGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVK- 200

Query: 190 DYAIRVNGIAPGPIK 204
              I V+ + P  ++
Sbjct: 201 PNGIGVSVLCPMVVE 215

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  126 bits (319), Expect = 8e-36
 Identities = 52/238 (21%), Positives = 87/238 (36%), Gaps = 29/238 (12%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDV 70
            KVA++TG   GIG  I+  L + G A+A+  R    L      L    G+       DV
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
            K E      +  +  FG +D++V  A   +    E+LS   F  +IE++ +G +     
Sbjct: 62  SKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKA 121

Query: 131 ALKYLKKGGRGQASSSSGGIIINI-SATLHYTATW--YQIHVSAAKAAVDSITRSLALEW 187
            L  LK+ G        G  ++     +         Y     + K A  ++ R+  +E 
Sbjct: 122 FLDSLKRTG--------GLALVTTSDVSARLIPYGGGY----VSTKWAARALVRTFQIE- 168

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
             +  +R   + PG + DT                       + +  +IA A   L  
Sbjct: 169 --NPDVRFFELRPGAV-DT---------YFGGSKPGKPKEKGYLKPDEIAEAVRCLLK 214

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  126 bits (319), Expect = 1e-35
 Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 27/218 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
                 L+TG   GIG   +  L   G  + +M R +  L++  A L      A+ L GD
Sbjct: 3   GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG----ALPLPGD 58

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           VR+  D  R V +    FG+L  LVN A    + P  +L+   +R V++ +  G F+   
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIR 118

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLAL 185
            A+  L + G G         I+N+ +            Y    +A+K  +  +  +  L
Sbjct: 119 HAVPALLRRGGGT--------IVNVGSLAGKNPFKGGAAY----NASKFGLLGLAGAAML 166

Query: 186 EWGTDYAIRVNGIAPGPI------KDTAGVSKLAPEEI 217
           +   +  +RV  + PG +             KL PE++
Sbjct: 167 DLR-EANVRVVNVLPGSVDTGFAGNTPGQAWKLKPEDV 203

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  126 bits (318), Expect = 2e-35
 Identities = 64/245 (26%), Positives = 101/245 (41%), Gaps = 34/245 (13%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              +  L+TGG  GIG  I+ +L   G  +A+  R      S             G+E D
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR-----GSGAPK------GLFGVEVD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
           V   +   R   +   H G +++LV+  AG     FL+    ++   F  VI  +  G F
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVS-NAGLSADAFLM---RMTEEKFEKVINANLTGAF 117

Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
            +   A + +   K GR          +I I +         Q + +A+KA V  + RS+
Sbjct: 118 RVAQRASRSMQRNKFGR----------MIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           A E      +  N +APG I DT     L  E I+  A  ++ A + G   ++A    +L
Sbjct: 168 ARELSK-ANVTANVVAPGYI-DTDMTRAL-DERIQQGALQFIPAKRVGTPAEVAGVVSFL 224

Query: 244 ASDAA 248
           AS+ A
Sbjct: 225 ASEDA 229

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  123 bits (311), Expect = 6e-35
 Identities = 33/193 (17%), Positives = 61/193 (31%), Gaps = 34/193 (17%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
               LL G    +G  +  +L K  A +   GR                  +  +  D+ 
Sbjct: 3   AMKILLIGASGTLGSAVKERLEK-KAEVITAGRH-----------------SGDVTVDIT 44

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
             +   ++ E      GK+D +V+A       P  +L+P      I     G   +    
Sbjct: 45  NIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
           +  L   G               +  +           + A  AV +  +S A+E     
Sbjct: 101 IDSLNDKGS----------FTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRG- 149

Query: 192 AIRVNGIAPGPIK 204
            IR+N ++P  ++
Sbjct: 150 -IRINTVSPNVLE 161

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  124 bits (313), Expect = 1e-34
 Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 13/241 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK +V ++TG  SG+G  ++  L + GA +  +  +        A    LG        D
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNAD 61

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           V    DA   +      FG +  LVN A        L  +   + + F   + ++ +GTF
Sbjct: 62  VTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTF 121

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            M   A + + +      +    G+I+N ++   +     Q   +A+K  V ++T   A 
Sbjct: 122 NMIRLAAEVMSQ--GEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAR 179

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLA 244
           E    + IRV  IAPG   DT  ++ + P++++      +      G   + A    ++ 
Sbjct: 180 ELA-RFGIRVVTIAPGIF-DTPMMAGM-PQDVQDALAASVPFPPRLGRAEEYAALVKHIC 236

Query: 245 S 245
            
Sbjct: 237 E 237

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  123 bits (312), Expect = 1e-34
 Identities = 59/245 (24%), Positives = 100/245 (40%), Gaps = 34/245 (13%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              +  L+TGG  GIG  I+      G  +AI  R                   + ++ D
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYR-----SGEPPE------GFLAVKCD 67

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +   E   +  +      G +++L+   AG      L+    +S   F +V+E +  GTF
Sbjct: 68  ITDTEQVEQAYKEIEETHGPVEVLIA-NAGVTKDQLLM---RMSEEDFTSVVETNLTGTF 123

Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
            +   A + +   K GR          ++ IS+ +    +  Q + +A+KA +    RSL
Sbjct: 124 RVVKRANRAMLRAKKGR----------VVLISSVVGLLGSAGQANYAASKAGLVGFARSL 173

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           A E G+   I  N +APG + DT     L  +E R+     +   ++    +IA    +L
Sbjct: 174 ARELGS-RNITFNVVAPGFV-DTDMTKVL-TDEQRANIVSQVPLGRYARPEEIAATVRFL 230

Query: 244 ASDAA 248
           ASD A
Sbjct: 231 ASDDA 235

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  125 bits (316), Expect = 1e-34
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 5/197 (2%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
             G+ A +TGG +G+G  +  QL   G  +AI   R+  +  A+A L +   G   +G++
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ 65

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            DV  RE      +     FG + IL N A  N   P E+ S + +  ++ ++  G    
Sbjct: 66  LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNG 125

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
               +  + +  R +A    GG ++N ++   + A       +  K AV  ++ SL    
Sbjct: 126 VTTFVPRMVE--RVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL 183

Query: 188 GTDYAIRVNGIAPGPIK 204
              Y I V+ + PG +K
Sbjct: 184 L-KYEIGVSVLCPGLVK 199

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  123 bits (310), Expect = 3e-34
 Identities = 48/236 (20%), Positives = 91/236 (38%), Gaps = 23/236 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K+A++TG   G+G EI   L +     A+ GR    L +         I +     D
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHIVYAL-GRNPEHLAALAEIEGVEPIES-----D 56

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           + K       V+  + +   +D LV+AAA       E  S   +   ++++ +    +  
Sbjct: 57  IVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSR 115

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           + L  L+            G +I I++             +A+K A+  +  +   E   
Sbjct: 116 QLLPALRAA---------SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEA- 165

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           +  IRV+ ++PGP  +T  +  L   +  +          + E  +IA A  ++  
Sbjct: 166 NNGIRVSTVSPGPT-NTPMLQGLMDSQGTN-----FRPEIYIEPKEIANAIRFVID 215

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  121 bits (305), Expect = 2e-33
 Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 15/243 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           +KG VA++TGG SG+G   + +L   GA+  ++    +   +       LG   +    D
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPAD 66

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAED--LSPNGFRTVIEIDSVG 123
           V   +D    +      FG++D+ VN A    A       +    +   F+ V++++ +G
Sbjct: 67  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
           TF +       + +           G+IIN ++   +     Q   SA+K  +  +T  +
Sbjct: 127 TFNVIRLVAGEMGQ--NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 184

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALY 242
           A +      IRV  IAPG    T  ++ L PE++ +     +      G+  + A     
Sbjct: 185 ARDLA-PIGIRVMTIAPGLF-GTPLLTSL-PEKVCNFLASQVPFPSRLGDPAEYAHLVQA 241

Query: 243 LAS 245
           +  
Sbjct: 242 IIE 244

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  120 bits (303), Expect = 3e-33
 Identities = 71/240 (29%), Positives = 103/240 (42%), Gaps = 19/240 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TG  SGIG   +  L   GAA+AI  RR   LR+    L + G     LE D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  R+     V ST+   G LDILVN A    L P ED     +  +I+ + +G   M  
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTR 124

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLAL 185
            AL +L +           G ++ +S+         A  Y     A K  V++ + +L  
Sbjct: 125 AALPHLLRS---------KGTVVQMSSIAGRVNVRNAAVY----QATKFGVNAFSETLRQ 171

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
           E   +  +RV  I PG   DT     +     +      ++  +  +  DIA A  Y  +
Sbjct: 172 EVT-ERGVRVVVIEPGTT-DTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVT 229

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  118 bits (297), Expect = 3e-32
 Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 10/197 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           + G++ L+TG G GIG   + +  K  + + +    K  L    A    LG        D
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 88

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
              RED     +      G + ILVN A   +                E++ +  F    
Sbjct: 89  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK 148

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             L  + K   G         I+ +++   + +  + +   ++K A     ++L  E   
Sbjct: 149 AFLPAMTKNNHGH--------IVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAA 200

Query: 190 DYA--IRVNGIAPGPIK 204
                ++   + P  + 
Sbjct: 201 LQITGVKTTCLCPNFVN 217

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  117 bits (296), Expect = 6e-32
 Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 13/241 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
            + ++AL+TG   GIG  ++  L + G  +    R    +    A   S G P   I   
Sbjct: 30  WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 89

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            D+   ED + +  +  +    +DI +N A           S +G++ +  ++ +   I 
Sbjct: 90  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 149

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHV-SAAKAAVDSITRSLAL 185
             EA + +K+  R        G IINI++   H        H  SA K AV ++T  L  
Sbjct: 150 TREAYQSMKE--RNVDD----GHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 203

Query: 186 EWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
           E       IR   I+PG + +T   +    ++   KA       K  +  D+A A +Y+ 
Sbjct: 204 ELREAQTHIRATCISPGVV-ET-QFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVL 261

Query: 245 S 245
           S
Sbjct: 262 S 262

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  116 bits (293), Expect = 8e-32
 Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 15/242 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           ++  VA++TGG SG+G   + +L   GA + ++  R          +  LG  A     D
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR------GEDVVADLGDRARFAAAD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           V         ++      G L I+VN A    A   L      S   FR +++I+ VG+F
Sbjct: 61  VTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            +   A + + K      ++   G+IIN ++   +     Q   SA+K  V  +T  +A 
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLA 244
           +    + IRV  IAPG   DT  ++ L PEE R+     +      G   +    A+++ 
Sbjct: 180 DLA-SHRIRVMTIAPGLF-DTPLLASL-PEEARASLGKQVPHPSRLGNPDEYGALAVHII 236

Query: 245 SD 246
            +
Sbjct: 237 EN 238

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  116 bits (294), Expect = 9e-32
 Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 19/197 (9%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
           ++  KV L+TG   GIG  I+ +LG  GA I +  RR+  + +    +   G  A+    
Sbjct: 1   MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL 60

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV  R       ++ ++ +G++D+LVN A    L P   +  + +  +I+++  G     
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLA 184
              L  ++    GQ        IINI +         A  Y     A K AV +I+  L 
Sbjct: 121 GAVLPIMEAQRSGQ--------IINIGSIGALSVVPTAAVY----CATKFAVRAISDGLR 168

Query: 185 LEWGTDYAIRVNGIAPG 201
            E      IRV  + PG
Sbjct: 169 QE---STNIRVTCVNPG 182

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  115 bits (289), Expect = 3e-31
 Identities = 45/259 (17%), Positives = 80/259 (30%), Gaps = 49/259 (18%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
            + +++G  +GIG      L   G  I  +  R                    +  D+  
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR-----------------DAEVIADLST 44

Query: 73  REDAVRVVESTI-NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
            E   + +   +      +D LV  A    L P   +       V+ ++  G   +    
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAG---LGPQTKV----LGNVVSVNYFGATELMDAF 97

Query: 132 LKYLKKGGRG--------------------QASSSSGGIIINISATLHYTATWYQIHVSA 171
           L  LKKG +                       +  +G      +   H       +  + 
Sbjct: 98  LPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAG 157

Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMAAYK- 229
           +K A+    R  A  WG +  +R+N IAPG   +T  +   L           ++     
Sbjct: 158 SKNALTVAVRKRAAAWG-EAGVRLNTIAPGAT-ETPLLQAGLQDPRYGESIAKFVPPMGR 215

Query: 230 FGEKWDIAMAALYLASDAA 248
             E  ++A    +L S AA
Sbjct: 216 RAEPSEMASVIAFLMSPAA 234

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  111 bits (279), Expect = 3e-29
 Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 19/257 (7%)

Query: 2   ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAI-------AIMGRRKTVLRSA-- 52
           + P    ++ G+V ++TG G GIG   +L     GA +        + G   +   +A  
Sbjct: 17  QGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQS 76

Query: 53  -VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 111
            V  + + G  A+    +V   + A  ++++ +  FG LD+LVN A         + S  
Sbjct: 77  VVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEE 136

Query: 112 GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171
            F  VI +   G F     A  Y +  G  +A  +  G IIN S+      +  Q + SA
Sbjct: 137 EFDAVIAVHLKGHFATMRHAAAYWR--GLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSA 194

Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
           AKA + ++T   A E G  Y + VN IAP     T     +  E + ++       +   
Sbjct: 195 AKAGIATLTLVGAAEMGR-YGVTVNAIAPS--ARTRMTETVFAEMMATQD----QDFDAM 247

Query: 232 EKWDIAMAALYLASDAA 248
              +++   ++L S  A
Sbjct: 248 APENVSPLVVWLGSAEA 264

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  108 bits (272), Expect = 1e-28
 Identities = 51/244 (20%), Positives = 91/244 (37%), Gaps = 31/244 (12%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              K+ ++TG  SGIG  I+ +  + G  + ++ RR   L+ A+   ++L         D
Sbjct: 14  SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK-ALNLPNTLCAQV-----D 67

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  +      +      +G  D +VN A    L   +    N ++ + +++ +G      
Sbjct: 68  VTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQ 127

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLAL 185
             L  +K    G         IINIS+     T      Y       K AV +I+ ++  
Sbjct: 128 AVLAPMKARNCGT--------IINISSIAGKKTFPDHAAY----CGTKFAVHAISENVRE 175

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----DIAMAAL 241
           E      +RV  IAP  +  T  +S    ++I+     +              D+A A L
Sbjct: 176 EVA-ASNVRVMTIAPSAV-KTELLSHTTSQQIKDGYDAW---RVDMGGVLAADDVARAVL 230

Query: 242 YLAS 245
           +   
Sbjct: 231 FAYQ 234

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  108 bits (271), Expect = 4e-28
 Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 33/248 (13%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSLG 60
             G+V L+TG G G+G   +L   + GA + +         +G+  +     V  +   G
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
             A+     V   E   ++V++ ++ FG++D++VN A          +S   +  +  + 
Sbjct: 67  GKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVH 123

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
             G+F +   A  ++KK   G+        II  ++       + Q + SAAK  +  + 
Sbjct: 124 LRGSFQVTRAAWDHMKKQNYGR--------IIMTASASGIYGNFGQANYSAAKLGLLGLA 175

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
            +L +E G    I  N IAP     +     + PE++     + +          +A   
Sbjct: 176 NTLVIE-GRKNNIHCNTIAPNAG--SRMTETVMPEDLV----EALKPE------YVAPLV 222

Query: 241 LYLASDAA 248
           L+L  ++ 
Sbjct: 223 LWLCHESC 230

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  110 bits (276), Expect = 5e-28
 Identities = 58/250 (23%), Positives = 97/250 (38%), Gaps = 35/250 (14%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
           L GKVA++TG   GIG  I+    + GA +  +         A   L  +   +    L 
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDV-----DGAAEDLKRVADKVGGTALT 265

Query: 68  GDVRKREDAVRVVESTINHFG-KLDILVNAAAG----NFLV--PAEDLSPNGFRTVIEID 120
            DV   +   ++      H G K+DILVN  AG      L     +      +  VI ++
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVN-NAGITRDKLLANMDEKR-----WDAVIAVN 319

Query: 121 SVGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
            +    +    +    + +GGR          +I +S+         Q + +  KA +  
Sbjct: 320 LLAPQRLTEGLVGNGTIGEGGR----------VIGLSSMAGIAGNRGQTNYATTKAGMIG 369

Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
           +  +LA     D  I +N +APG I +T     + P   R       + ++ G+  D+A 
Sbjct: 370 LAEALAPVLA-DKGITINAVAPGFI-ETKMTEAI-PLATREVGRRLNSLFQGGQPVDVAE 426

Query: 239 AALYLASDAA 248
              Y AS A+
Sbjct: 427 LIAYFASPAS 436

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  105 bits (265), Expect = 8e-28
 Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 23/240 (9%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           + AL+TGG SG+G   +L L   G  + +              L   G   I +EGDV +
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVV------------LDLRREGEDLIYVEGDVTR 50

Query: 73  REDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
            ED  R V         L  +V+AA    A   L          FR V+E++ +GTF + 
Sbjct: 51  EEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A   +++           G+I+N ++   +     Q   +A+K  V ++T   A E  
Sbjct: 110 RLAAWAMRENPPDAEGQR--GVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA 167

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDA 247
             + IRV  +APG   DT  +  L PE+ ++     +      G   + A   L++  + 
Sbjct: 168 -GWGIRVVTVAPGLF-DTPLLQGL-PEKAKASLAAQVPFPPRLGRPEEYAALVLHILENP 224

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  104 bits (261), Expect = 7e-27
 Identities = 44/206 (21%), Positives = 75/206 (36%), Gaps = 18/206 (8%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
                           +TG  SG G   + +  + G ++ + GRR+  L+ A+A   S  
Sbjct: 10  SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQ-ALAGELSAK 68

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEI 119
              + L  DVR R      V++    F  L  L+N A       PA+    + + T+++ 
Sbjct: 69  TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDT 128

Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS---ATLHY-TATWYQIHVSAAKAA 175
           +  G        L  L   G       +G  I+N+        Y  +  Y       KA 
Sbjct: 129 NIKGLLYSTRLLLPRLIAHG-------AGASIVNLGSVAGKWPYPGSHVY----GGTKAF 177

Query: 176 VDSITRSLALEWGTDYAIRVNGIAPG 201
           V+  + +L  +      +RV  + PG
Sbjct: 178 VEQFSLNLRCDLQ-GTGVRVTNLEPG 202

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  103 bits (258), Expect = 9e-27
 Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 21/198 (10%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
           + L+TG  +G G  I+ +  + G  +   GRR+  L+  +     LG      + DVR R
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ-ELKD--ELGDNLYIAQLDVRNR 58

Query: 74  EDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
                ++ S    +  +DILVN A     + PA   S   + T+I+ ++ G   M    L
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 133 KYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLALEWG 188
             + +   G         IINI +T   +       Y     A KA V   + +L  +  
Sbjct: 119 PGMVERNHGH--------IINIGSTAGSWPYAGGNVY----GATKAFVRQFSLNLRTDL- 165

Query: 189 TDYAIRVNGIAPGPIKDT 206
              A+RV  I PG +  T
Sbjct: 166 HGTAVRVTDIEPGLVGGT 183

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  107 bits (268), Expect = 1e-26
 Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 33/248 (13%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSLG 60
            K KV ++TG G G+G   SL+  K GA + +          G         V  +   G
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
             A+    +V    D  ++VE+ + +FG + +++N A        + ++   ++ VI++ 
Sbjct: 66  GVAVADYNNV---LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVH 122

Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
             G F +   A  Y +K   G+        I+N S+       + Q + ++AK+A+    
Sbjct: 123 LNGAFAVTKAAWPYFQKQKYGR--------IVNTSSPAGLYGNFGQANYASAKSALLGFA 174

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
            +LA E G  Y I+ N IA  P+  +     + P  +     + +          +A   
Sbjct: 175 ETLAKE-GAKYNIKANAIA--PLARSRMTESIMPPPML----EKLGPE------KVAPLV 221

Query: 241 LYLASDAA 248
           LYL+S   
Sbjct: 222 LYLSSAEN 229

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 99.0 bits (247), Expect = 7e-24
 Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 29/250 (11%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHS 58
             S      LK KV L+TG G+G+G E +    K+GA + +             V  + +
Sbjct: 311 DASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKT----VDEIKA 366

Query: 59  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 118
            G  A   + DV   +D+  ++++ I+ +G +DILVN A          +S   + +V +
Sbjct: 367 AGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQ 424

Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
           +  +GTF +   A  Y  +           G IINI++T      + Q + S++KA +  
Sbjct: 425 VHLIGTFNLSRLAWPYFVEKQ--------FGRIINITSTSGIYGNFGQANYSSSKAGILG 476

Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
           +++++A+E G    I+VN +AP    +TA    +  E+ +    +   A        +A 
Sbjct: 477 LSKTMAIE-GAKNNIKVNIVAPH--AETAMTLSIMREQDK----NLYHAD------QVAP 523

Query: 239 AALYLASDAA 248
             +YL +D  
Sbjct: 524 LLVYLGTDDV 533

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  101 bits (255), Expect = 2e-26
 Identities = 38/214 (17%), Positives = 77/214 (35%), Gaps = 25/214 (11%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
            + ++TG  SG+G E++      G A  + GR ++ L   V     L         D+  
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLS-TVTN--CLSNNVGYRARDLAS 58

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
            ++  ++ E           +V++A   +    ++  P   +T+IE +      +  E +
Sbjct: 59  HQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           K  K              ++ I +T        +    A K AV  +  S+ LE      
Sbjct: 116 KRYKDQPVN---------VVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELK-GKP 165

Query: 193 IRVNGIAPGPI---------KDTAGVSKLAPEEI 217
           +++  + PG +         K     S ++ E+ 
Sbjct: 166 MKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDA 199

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  105 bits (263), Expect = 6e-26
 Identities = 59/250 (23%), Positives = 100/250 (40%), Gaps = 37/250 (14%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSLG 60
             G+VA++TG G+G+G E +L   + GA + +          G  +      V  +   G
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
             A+     V    D  +V+E+ I  FG++DILVN A           S   +  V ++ 
Sbjct: 77  GEAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVH 133

Query: 121 SVGTFIMCHEALKYLKK--GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
             G+F     A  Y+KK   GR   +SS+ GI  N            Q++ +AAK  +  
Sbjct: 134 LKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG----------QVNYTAAKMGLIG 183

Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
           +  ++A+E G    +  N I P     +     + P+ +     + +          IA 
Sbjct: 184 LANTVAIE-GARNNVLCNVIVPT--AASRMTEGILPDILF----NELKPKL------IAP 230

Query: 239 AALYLASDAA 248
              YL  ++ 
Sbjct: 231 VVAYLCHESC 240

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  101 bits (253), Expect = 1e-25
 Identities = 43/202 (21%), Positives = 70/202 (34%), Gaps = 23/202 (11%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIA---IMGRRKTVLRSAVAALHS--LGIPAI 64
           L  K  L+TG  +GIG   +L+  +         +  RR   L      +          
Sbjct: 31  LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90

Query: 65  GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVG 123
             + D+ + E     +E+    F  +DILVN A           ++    + V + +   
Sbjct: 91  VAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTA 150

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSI 179
              +    L   +    G         I+N+ +          + Y     A+K AV + 
Sbjct: 151 LINITQAVLPIFQAKNSGD--------IVNLGSIAGRDAYPTGSIY----CASKFAVGAF 198

Query: 180 TRSLALEWGTDYAIRVNGIAPG 201
           T SL  E   +  IRV  IAPG
Sbjct: 199 TDSLRKEL-INTKIRVILIAPG 219

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 98.0 bits (245), Expect = 3e-25
 Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 24/190 (12%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
            L+TG   G+G   +  L   G  + + GRR   L      + +  +PA     D+    
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVGARALPA-----DLADEL 55

Query: 75  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
           +A  ++E      G LD+LV+A          +   +    ++    +         LK+
Sbjct: 56  EAKALLE----EAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAA----FVLKH 107

Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
            +     +         +   A   Y         +AAK A+++   +   E      + 
Sbjct: 108 ARFQKGAR--------AVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELL-REGVH 158

Query: 195 VNGIAPGPIK 204
           +  +    + 
Sbjct: 159 LVLVRLPAVA 168

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 99.8 bits (249), Expect = 8e-25
 Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 34/234 (14%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-------AVAALHSLGIPA 63
             K+ L+TG  SG G   +  L   G  +    R      +         A  + + +  
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
           + L  DV+ +    R ++  I   G++D+L++ A      PAE  +P  F  + +I+ + 
Sbjct: 64  LEL--DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLS 121

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDS 178
           T  +   AL ++++   G         +I IS++     T      Y     AAKAA+D+
Sbjct: 122 TQRVNRAALPHMRRQKHGL--------LIWISSSSSAGGTPPYLAPY----FAAKAAMDA 169

Query: 179 ITRSLALE---WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAY 228
           I    A E   WG    I  + I PG     T   +     +  ++  +Y A  
Sbjct: 170 IAVQYARELSRWG----IETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGP 219

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 95.0 bits (237), Expect = 2e-23
 Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 26/199 (13%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KV L+TG  SG G  I+      G  +    RR   L   VAA +     AI L  DV  
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA-YPDRAEAISL--DVTD 62

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
            E    V    +  +G++D+LVN A    +   E+ +    R + E+   G   +    L
Sbjct: 63  GERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVSAAKAAVDSITRSLALE-- 186
             +    R + S    G ++NIS+     +      Y    SA KAA++ ++  LA E  
Sbjct: 123 PQM----RERGS----GSVVNISSFGGQLSFAGFSAY----SATKAALEQLSEGLADEVA 170

Query: 187 -WGTDYAIRVNGIAPGPIK 204
            +G    I+V  + PG  +
Sbjct: 171 PFG----IKVLIVEPGAFR 185

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 92.0 bits (229), Expect = 2e-22
 Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 14/207 (6%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGD 69
              VAL+TGG  GIG  I   L +  +   ++  R  T  ++AV  L + G+     + D
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   +    + +     +G LD+LVN A   F V             ++ +  GT  +C 
Sbjct: 63  IDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT 122

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT--RSLALEW 187
           E L  +K  GR          ++N+S+ +   A          K   ++IT    + L  
Sbjct: 123 ELLPLIKPQGR----------VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMN 172

Query: 188 GTDYAIRVNGIAPGPIKDTA-GVSKLA 213
                 +           +A GV+K+ 
Sbjct: 173 KFVEDTKKGVHQKEGWPSSAYGVTKIG 199

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 89.2 bits (221), Expect = 4e-21
 Identities = 48/250 (19%), Positives = 77/250 (30%), Gaps = 45/250 (18%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           M       + K + A++TGG  GIGFEI  QL  +G  + +  R  T    AV  L +  
Sbjct: 1   MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN 60

Query: 61  IP-AIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAED----------- 107
               +  + DV      +  + +    HFGKLDILVN A         D           
Sbjct: 61  HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120

Query: 108 -------------------LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 148
                               +       ++I+  G   +    +  L+         S  
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL--------SDS 172

Query: 149 GIIINISATLHYTATWYQIHVSAAKAAVDSIT----RSLALEWGTDYAIRVNGIAPGPIK 204
             I+N+S++                   D++T      +      D+   +      P  
Sbjct: 173 PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSF 232

Query: 205 DTA-GVSKLA 213
             A   SK  
Sbjct: 233 GAAYTTSKAC 242

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 87.8 bits (218), Expect = 6e-21
 Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 17/203 (8%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIA-IMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
              ++TG   GIG  +  QL K       I   R     + + ++    +  + L   V 
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPL--TVT 61

Query: 72  KREDAVRVVESTINHFG--KLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
             +     V       G   L +L+ NA          + +       +++++    ++ 
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 129 HEALKYLKKGG---RGQASSSSGGIIINISA-----TLHYTATWYQIHVS--AAKAAVDS 178
            + L  LK       G   S S   +I IS+     T + + +     ++   +KAA++ 
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 179 ITRSLALEWGTDYAIRVNGIAPG 201
             R+LA++   D  + V    PG
Sbjct: 182 FGRTLAVDLK-DDNVLVVNFCPG 203

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 83.2 bits (206), Expect = 4e-19
 Identities = 37/202 (18%), Positives = 67/202 (33%), Gaps = 16/202 (7%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIA--IMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
              L+TG   G+G  +   L              R       +  L         LE D+
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 81

Query: 71  RKREDAVRVVE--STINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           R  +   ++V     +     L++L  NA           +        ++ ++V   ++
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141

Query: 128 CHEALKYLKKGG---RGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSI 179
               L  LKK       Q        IIN+S+       +     Y    S  K+A+++ 
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTS--KSALNAA 199

Query: 180 TRSLALEWGTDYAIRVNGIAPG 201
           T+SL+++      I    + PG
Sbjct: 200 TKSLSVDLYPQ-RIMCVSLHPG 220

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 80.9 bits (200), Expect = 5e-18
 Identities = 56/262 (21%), Positives = 97/262 (37%), Gaps = 33/262 (12%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAA----IAIMGRRKTV--LRSAVAALHSLGIPAIGL 66
            V L+TG  SGIG  ++++L    +      A +   KT   L  A  AL         L
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           + DVR  +      E      G++D+LV  A    L P E L  +   +V++++ VGT  
Sbjct: 63  QLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVSAAKAAVDSITRS 182
           M    L  +K+ G G+        ++   +            Y     A+K A++ +  S
Sbjct: 121 MLQAFLPDMKRRGSGR--------VLVTGSVGGLMGLPFNDVY----CASKFALEGLCES 168

Query: 183 LALE---WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
           LA+    +G    + ++ I  GP+          +PEE+  +   +     +        
Sbjct: 169 LAVLLLPFG----VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQ 224

Query: 239 AALYLASD-AAVHRDLIHLLDD 259
                A +   V    +  L  
Sbjct: 225 VFREAAQNPEEVAEVFLTALRA 246

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 56/272 (20%), Positives = 95/272 (34%), Gaps = 55/272 (20%)

Query: 8   DILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPA 63
            +L GK  L++G  +   I F I+    + GA + +    R + + R        L   A
Sbjct: 3   GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT----DRLPAKA 58

Query: 64  IGLEGDVRKREDAVRVVESTINHFG---KLDILVNAAAGNFLVPAEDLSPN--------G 112
             LE DV+  E    +        G   KLD +V++    F +P   +  N         
Sbjct: 59  PLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIG--F-MPQTGMGINPFFDAPYAD 115

Query: 113 FRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQI 167
               I I S  ++  M    L  +  GG          I+      + +  +     Y  
Sbjct: 116 VSKGIHI-SAYSYASMAKALLPIMNPGG---------SIV-----GMDFDPSRAMPAYNW 160

Query: 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 227
            ++ AK+A++S+ R +A E G    +R N +A GPI+  A  + +               
Sbjct: 161 -MTVAKSALESVNRFVAREAGKY-GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLL 218

Query: 228 YKFGE-----KW------DIAMAALYLASDAA 248
            +  +      W       +A     L SD  
Sbjct: 219 EEGWDQRAPIGWNMKDATPVAKTVCALLSDWL 250

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 57/268 (21%), Positives = 99/268 (36%), Gaps = 61/268 (22%)

Query: 9   ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAI 64
            L GK  L+TG  S   I + I+  + + GA +A   +G+ K  +    A  +     A 
Sbjct: 23  FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNP----AA 78

Query: 65  GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTV 116
            L  DV   ++   +       +  LD +V++ A        GNF+   + ++  GF   
Sbjct: 79  VLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFI---DCVTREGFSIA 135

Query: 117 IEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVS 170
            +I S  +F  +  E    +K             ++      L Y         Y   + 
Sbjct: 136 HDI-SAYSFAALAKEGRSMMKNRN--------ASMV-----ALTYIGAEKAMPSYNT-MG 180

Query: 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 230
            AKA++++  R  AL  G D  I+VN ++ GPIK  A           S  +++     +
Sbjct: 181 VAKASLEATVRYTALALGED-GIKVNAVSAGPIKTLAA----------SGISNFKKMLDY 229

Query: 231 GEKW----------DIAMAALYLASDAA 248
                         ++     +L SD A
Sbjct: 230 NAMVSPLKKNVDIMEVGNTVAFLCSDMA 257

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 76.4 bits (188), Expect = 2e-16
 Identities = 67/291 (23%), Positives = 106/291 (36%), Gaps = 71/291 (24%)

Query: 10  LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAI------------------------MG 43
           L+G+ A + G     G G+ I+  L   GA +A+                        + 
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 44  RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--------HFGKLDILVN 95
               +  + V  L +       +  D++  +    V   TI           G +DILV+
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126

Query: 96  AAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSG 148
           + A         L    + S  G+       S  +F+ +       + +GG         
Sbjct: 127 SLANGPEVTKPLL----ETSRKGYLAASSN-SAYSFVSLLQHFGPIMNEGG--------- 172

Query: 149 GIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 203
             +     TL Y A       Y   +S+AKAA++S TR+LA E G  Y +RVN I+ GP+
Sbjct: 173 SAV-----TLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPL 227

Query: 204 KDTA--GVSKLAPEEIRSKATDYMAAYKFGEK----WDIAMAALYLASDAA 248
           K  A   + K   +     A DY        +     D+  AAL+L S  A
Sbjct: 228 KSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLA 278

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 75.9 bits (187), Expect = 3e-16
 Identities = 62/295 (21%), Positives = 98/295 (33%), Gaps = 85/295 (28%)

Query: 10  LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAI------------------------MG 43
           L+GK A + G     G G+ ++  L   GA I +                        + 
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 44  RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--------HFGKLDILVN 95
               +    V  L ++      +  DV+  +        T+          FG +DILV+
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 96  AAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSG 148
           + A         L    + S  G+   I   S  +F+ +    L  +  GG         
Sbjct: 126 SLANGPEVSKPLL----ETSRKGYLAAISA-SSYSFVSLLSHFLPIMNPGG--------- 171

Query: 149 GIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 203
             I     +L Y A+      Y   +S+AKAA++S TR LA E G    IRVN I+ GP+
Sbjct: 172 ASI-----SLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL 226

Query: 204 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----------DIAMAALYLASDAA 248
              A                     ++              ++  AA +L S  A
Sbjct: 227 GSRAA----------KAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLA 271

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 75.4 bits (186), Expect = 3e-16
 Identities = 62/265 (23%), Positives = 103/265 (38%), Gaps = 54/265 (20%)

Query: 9   ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIP- 62
            L+ K  ++ G  +   I F ++  L + GA +       R    R  +  L   L  P 
Sbjct: 29  NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER---SRKELEKLLEQLNQPE 85

Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFR 114
           A   + DV+  E+ +   E      G +D + ++ A        G F     + S  GF 
Sbjct: 86  AHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFS----ETSREGFL 141

Query: 115 TVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
              +I S  +   + HEA K + +GG   A++  GG      A  +Y        +  AK
Sbjct: 142 LAQDI-SSYSLTIVAHEAKKLMPEGGSIVATTYLGGE----FAVQNYNV------MGVAK 190

Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
           A++++  + LAL+ G D  IRVN I+ GPI+  +                +    K  E+
Sbjct: 191 ASLEANVKYLALDLGPD-NIRVNAISAGPIRTLSA----------KGVGGFNTILKEIEE 239

Query: 234 W----------DIAMAALYLASDAA 248
                      ++   A YL SD +
Sbjct: 240 RAPLKRNVDQVEVGKTAAYLLSDLS 264

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 74.9 bits (185), Expect = 4e-16
 Identities = 63/266 (23%), Positives = 106/266 (39%), Gaps = 58/266 (21%)

Query: 9   ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
            L GK AL+ G  +   +GF I+ +L + GA +A+  + + +   A     +LG  A+  
Sbjct: 5   DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLF 63

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
             DV + E+   +       FG LD LV+A A        G ++    D     +   +E
Sbjct: 64  RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYI----DTRRQDWLLALE 119

Query: 119 IDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSAA 172
           + S  + + +   A   L++GG         GI+     TL Y         Y + ++ A
Sbjct: 120 V-SAYSLVAVARRAEPLLREGG---------GIV-----TLTYYASEKVVPKYNV-MAIA 163

Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
           KAA+++  R LA E G    +RVN I+ GP++  A                +   Y    
Sbjct: 164 KAALEASVRYLAYELGPK-GVRVNAISAGPVRTVAA----------RSIPGFTKMYDRVA 212

Query: 233 KW----------DIAMAALYLASDAA 248
           +           ++    L+L S  A
Sbjct: 213 QTAPLRRNITQEEVGNLGLFLLSPLA 238

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 74.5 bits (184), Expect = 4e-16
 Identities = 55/265 (20%), Positives = 99/265 (37%), Gaps = 54/265 (20%)

Query: 9   ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGI-P 62
            L+G+  ++ G  +   I + I+  L + GA +     G R   L  +V  L  +L    
Sbjct: 4   SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER---LEKSVHELAGTLDRND 60

Query: 63  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFR 114
           +I L  DV    +      S     G +  + +  A        G +L    + + +GF 
Sbjct: 61  SIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYL----NTNRDGFL 116

Query: 115 TVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
               I S  +   +   A   + +GG     +  GG         +Y        +  AK
Sbjct: 117 LAHNI-SSYSLTAVVKAARPMMTEGGSIVTLTYLGGE----LVMPNYNV------MGVAK 165

Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
           A++D+  + LA + G +  IRVN I+ GPI+  +              +D+ +  K  E+
Sbjct: 166 ASLDASVKYLAADLGKE-NIRVNSISAGPIRTLSA----------KGISDFNSILKDIEE 214

Query: 234 W----------DIAMAALYLASDAA 248
                      ++   A +L SD +
Sbjct: 215 RAPLRRTTTPEEVGDTAAFLFSDMS 239

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 74.6 bits (184), Expect = 7e-16
 Identities = 61/267 (22%), Positives = 104/267 (38%), Gaps = 54/267 (20%)

Query: 6   KGDILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLG 60
            G +++GK  ++ G  +   + + I+  +   GA +A+  +       +  V  L  SLG
Sbjct: 24  TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET---FKKRVDPLAESLG 80

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNG 112
           +    +  DV   E    + +     +G LD +V+A A        G ++    D S   
Sbjct: 81  VKLT-VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYV----DTSLGN 135

Query: 113 FRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171
           F T + I S  +F  +  +A   +  GG     S  G          HY        +  
Sbjct: 136 FLTSMHI-SCYSFTYIASKAEPLMTNGGSILTLSYYGAE----KVVPHYNV------MGV 184

Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
            KAA+++  + LA++ G    IRVN I+ GP++  A           S  +D+     + 
Sbjct: 185 CKAALEASVKYLAVDLGKQ-QIRVNAISAGPVRTLAS----------SGISDFHYILTWN 233

Query: 232 EKW----------DIAMAALYLASDAA 248
           +            D+  AALYL SD  
Sbjct: 234 KYNSPLRRNTTLDDVGGAALYLLSDLG 260

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 74.2 bits (183), Expect = 8e-16
 Identities = 65/267 (24%), Positives = 99/267 (37%), Gaps = 54/267 (20%)

Query: 6   KGDILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLG 60
           +  +L+GK  L+ G  +   I + I+    + GA +A    G     L+  V  L   LG
Sbjct: 25  QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA---LKKRVEPLAEELG 81

Query: 61  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNG 112
                   DV        V E+    +GKLD LV+A          G ++    D S   
Sbjct: 82  AFVA-GHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYI----DTSEAN 136

Query: 113 FRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171
           F   + I SV +   +   A K +  GG     +  G          +Y        +  
Sbjct: 137 FTNTMLI-SVYSLTAVSRRAEKLMADGGSILTLTYYGAE----KVMPNYNV------MGV 185

Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
           AKAA+++  + LA++ G    IRVN I+ GPIK  A           S   D+    K+ 
Sbjct: 186 AKAALEASVKYLAVDLGPQ-NIRVNAISAGPIKTLAA----------SGIGDFRYILKWN 234

Query: 232 EKW----------DIAMAALYLASDAA 248
           E            ++    LY  SD +
Sbjct: 235 EYNAPLRRTVTIDEVGDVGLYFLSDLS 261

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 74.2 bits (183), Expect = 8e-16
 Identities = 67/269 (24%), Positives = 103/269 (38%), Gaps = 64/269 (23%)

Query: 9   ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIPA 63
            LKGK  L+ G  +   I + I+      GA +A   +      L   V  +   L  P 
Sbjct: 3   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES---LEKRVRPIAQELNSPY 59

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRT 115
           +  E DV K E    +  S     G LD +V++ A        G+ L    + S + F T
Sbjct: 60  V-YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLL----ETSKSAFNT 114

Query: 116 VIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHV 169
            +EI SV + I + +     L  G           ++     TL Y         Y + +
Sbjct: 115 AMEI-SVYSLIELTNTLKPLLNNGA---------SVL-----TLSYLGSTKYMAHYNV-M 158

Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229
             AKAA++S  R LA++ G    IRVN ++ GPI+  A           S   D+    K
Sbjct: 159 GLAKAALESAVRYLAVDLGKH-HIRVNALSAGPIRTLAS----------SGIADFRMILK 207

Query: 230 FGEKW----------DIAMAALYLASDAA 248
           + E            ++  A +YL S  +
Sbjct: 208 WNEINAPLRKNVSLEEVGNAGMYLLSSLS 236

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 73.7 bits (182), Expect = 9e-16
 Identities = 57/264 (21%), Positives = 97/264 (36%), Gaps = 53/264 (20%)

Query: 9   ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIPA 63
            L GK  L+TG  S   I + I+  + + GA +A      +   L+  V      LG   
Sbjct: 6   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK---LKGRVEEFAAQLGSDI 62

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRT 115
           + L+ DV +      +       + K D  V++          G+++     ++  GF+ 
Sbjct: 63  V-LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV---NAVTREGFKI 118

Query: 116 VIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
             +I S  +F+ M       L  G      S  G       A  +Y        +  AKA
Sbjct: 119 AHDI-SSYSFVAMAKACRSMLNPGSALLTLSYLGAE----RAIPNYNV------MGLAKA 167

Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
           ++++  R +A   G +  +RVN I+ GPI+  A           S   D+       E  
Sbjct: 168 SLEANVRYMANAMGPE-GVRVNAISAGPIRTLAA----------SGIKDFRKMLAHCEAV 216

Query: 235 ----------DIAMAALYLASDAA 248
                     D+  +A +L SD +
Sbjct: 217 TPIRRTVTIEDVGNSAAFLCSDLS 240

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 74.1 bits (182), Expect = 1e-15
 Identities = 70/310 (22%), Positives = 111/310 (35%), Gaps = 85/310 (27%)

Query: 4   PFKGDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAI-------------------- 41
           P   D L+GK A + G     G G+ I   L   GA + +                    
Sbjct: 2   PLPVD-LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFE 60

Query: 42  -----------------MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84
                              +   ++   +  L ++      +  +V   +    V   TI
Sbjct: 61  QDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTI 120

Query: 85  N--------HFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCH 129
           +          G++DILV++ A         L      S  G+   +   S  +F+ +  
Sbjct: 121 SEVAEAVRADVGQIDILVHSLANGPEVTKPLL----QTSRKGYLAAVSS-SSYSFVSLLQ 175

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLA 184
             L  +K+GG           +      L Y A+      Y   +S+AKAA++S  R+LA
Sbjct: 176 HFLPLMKEGG---------SAL-----ALSYIASEKVIPGYGGGMSSAKAALESDCRTLA 221

Query: 185 LEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKATDYMAAYKFGEK----WDIAM 238
            E G   A+RVN I+ GP+K  A   + K   +     A DY  A    +K     D+  
Sbjct: 222 FEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGR 281

Query: 239 AALYLASDAA 248
           AAL+L S  A
Sbjct: 282 AALFLLSPLA 291

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 73.4 bits (181), Expect = 1e-15
 Identities = 65/271 (23%), Positives = 94/271 (34%), Gaps = 53/271 (19%)

Query: 2   ESPFKGDILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL- 56
                   L GK  LLTG  S   I + I+    + GA +A   +G R    +  +    
Sbjct: 4   HHHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR---FKDRITEFA 60

Query: 57  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDL 108
              G   +    DV        +  S   H+  LD LV++          G+FL   + L
Sbjct: 61  AEFGSELV-FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFL---DGL 116

Query: 109 SPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167
           +   FR   +I S  +F  +   AL  L         S  G       A  +Y       
Sbjct: 117 TRENFRIAHDI-SAYSFPALAKAALPMLSDDASLLTLSYLGAE----RAIPNYNT----- 166

Query: 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 227
            +  AKAA+++  R LA+  G    +RVN I+ GPIK  A           S    +   
Sbjct: 167 -MGLAKAALEASVRYLAVSLGAK-GVRVNAISAGPIKTLAA----------SGIKSFGKI 214

Query: 228 YKFGEKW----------DIAMAALYLASDAA 248
             F E             +  A  +L SD A
Sbjct: 215 LDFVESNSPLKRNVTIEQVGNAGAFLLSDLA 245

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 73.0 bits (180), Expect = 2e-15
 Identities = 65/269 (24%), Positives = 107/269 (39%), Gaps = 63/269 (23%)

Query: 9   ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIPA 63
           +L+GK AL+TG  +   I + I+    + GA +A      +   L   V  +    G   
Sbjct: 18  LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK---LEKRVREIAKGFGSDL 74

Query: 64  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRT 115
           + ++ DV   ED   + +    ++G LDI+V++ A        G  +    D S  GF+ 
Sbjct: 75  V-VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVI----DTSREGFKI 129

Query: 116 VIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHV 169
            ++I SV + I +  E L  ++           G I+     TL Y         Y + +
Sbjct: 130 AMDI-SVYSLIALTRELLPLMEGRN--------GAIV-----TLSYYGAEKVVPHYNV-M 174

Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229
             AKAA++S  R LA +       R+N I+ GP+K  A              T +    +
Sbjct: 175 GIAKAALESTVRYLAYDIAKH-GHRINAISAGPVKTLAA----------YSITGFHLLME 223

Query: 230 FGEKW----------DIAMAALYLASDAA 248
              K           D+   A++L SD A
Sbjct: 224 HTTKVNPFGKPITIEDVGDTAVFLCSDWA 252

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 49/243 (20%), Positives = 82/243 (33%), Gaps = 65/243 (26%)

Query: 12  GKVALLTGGGS--GIGFEISLQLGKHGAAIAI------MGRRKTVLR------------- 50
             +  + G G   G G+ I+ +L K    I                +             
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 51  -------------SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 97
                        S   A             ++ +      V       +GK+++LV++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 98  A------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGI 150
           A       + L    + S  G+   +   S  + I +C   +  +K             I
Sbjct: 122 ANAKEVQKDLL----NTSRKGYLDALSK-SSYSLISLCKYFVNIMKPQS---------SI 167

Query: 151 IINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 205
           I     +L Y A+      Y   +S+AKAA++S TR LA   G +Y IR+N I+ GP+K 
Sbjct: 168 I-----SLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222

Query: 206 TAG 208
            A 
Sbjct: 223 RAA 225

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 9/103 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           +KGK A++  G   +G   +  L   GA + + GR+    ++A  +++           +
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAE 175

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAA-AGNFLVPAEDLSPN 111
                     V+           +  A   G  L+P       
Sbjct: 176 TADDASRAEAVKGA-------HFVFTAGAIGLELLPQAAWQNE 211

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 21/110 (19%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              +  ++TG  SG+G   + +L + GA + +  R      +A             + G 
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART----------MAGQ 63

Query: 70  VRKRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 113
           V  RE       +VR      +     D+L+N  AG   VP   L+ +GF
Sbjct: 64  VEVRELDLQDLSSVR---RFADGVSGADVLIN-NAGIMAVP-YALTVDGF 108

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	259
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	100.0
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.98
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.97
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.94
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.93
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.93
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.92
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.92
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.92
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.92
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.92
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.92
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.91
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.91
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.91
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.9
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.9
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.9
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.9
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.9
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.9
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.9
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.9
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.89
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.89
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.89
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.89
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.89
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.89
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.89
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.89
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.89
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.89
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.89
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.89
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.89
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.89
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.88
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.88
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.87
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.87
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.87
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.87
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.86
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.86
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.86
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.86
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.85
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.85
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.85
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.84
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.84
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.84
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.83
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.83
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.82
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.82
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.81
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.8
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.8
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.79
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.79
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.78
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.78
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.76
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.76
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.75
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.74
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.73
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.72
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.71
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.69
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.68
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.67
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.67
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.64
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.64
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.63
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.48
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.41
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.26
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.21
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.05
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.02
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.93
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.87
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.81
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.76
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.72
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.68
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.68
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.68
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.67
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.6
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.58
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.54
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.5
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.5
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.48
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.43
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.41
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.41
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.39
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.36
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.34
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.33
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.32
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.31
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.26
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.23
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.22
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.21
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.15
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.15
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.15
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.14
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.13
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.11
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.09
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.04
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.03
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.03
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.01
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.01
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.01
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.99
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.97
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.95
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.9
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.9
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.88
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.88
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.88
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.86
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.85
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.85
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.85
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.82
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.82
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.8
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.78
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.76
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.74
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.72
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.71
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.7
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.69
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.68
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.64
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.63
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.62
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.54
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.53
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.45
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.45
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.43
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.42
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.41
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.4
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.38
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.34
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.34
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.34
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.33
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.31
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.31
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.29
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.28
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.27
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.26
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.25
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.23
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.21
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.21
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.2
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.2
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.18
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.17
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.15
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.11
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.11
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.11
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.11
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.1
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.1
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.09
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.05
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.05
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	97.03
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.01
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.01
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.96
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.96
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.94
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.94
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.93
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.93
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.93
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.93
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.92
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.91
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.91
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.9
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.87
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.87
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.85
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.84
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.82
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.81
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.78
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.75
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.73
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.73
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.71
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.69
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.66
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.65
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.65
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.63
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.62
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.6
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.57
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.57
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.56
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.54
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.52
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.5
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.45
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.44
1lnq_A	336	MTHK channels, potassium channel related protein;	96.43
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.41
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.38
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.37
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.34
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.33
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.32
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.3
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.26
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.26
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.25
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.24
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.24
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.19
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.18
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.17
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.16
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.15
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.11
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	96.09
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.09
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.09
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.06
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.05
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.04
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.02
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.97
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	95.96
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.91
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.9
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.89
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.89
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.87
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.83

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.5e-63  Score=405.29  Aligned_cols=245  Identities=26%  Similarity=0.330  Sum_probs=231.7

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++|+||+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+.+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ||++|+||||||+...+++.+.++++|++.+++|+.++|+++|+++|+|.++..       +|+||++||..+..+.+..
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~-------~G~IVnisS~~~~~~~~~~  156 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAARPTV  156 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSBCTTC
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC-------CCEEEEEeehhhcCCCCCc
Confidence            999999999999998899999999999999999999999999999999976532       4999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++......+++..+.+.+..|++|+++|||||++++||+|+
T Consensus       157 ~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~  235 (255)
T 4g81_D          157 APYTAAKGGIKMLTCSMAAEWA-QFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSK  235 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999 999999999999999887655555677777888899999999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .++|+|||.|.+|
T Consensus       236 ~a~~iTG~~i~VD  248 (255)
T 4g81_D          236 ASDYINGQIIYVD  248 (255)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             hhCCCcCCEEEEC
Confidence            9999999999998

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.2e-62  Score=397.23  Aligned_cols=243  Identities=25%  Similarity=0.388  Sum_probs=224.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++|+||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.+.++.++++|++|+++++++++++.+.|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             CCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      |++|+||||||+.. ..++.+.++++|++.+++|+.++|+++|+++|+|++++.        |+||++||..+..+.+..
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--------G~IVnisS~~g~~~~~~~  154 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGK--------GVIVNTASIAGIRGGFAG  154 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTCSSSSC
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEechhhcCCCCCC
Confidence            99999999999764 578899999999999999999999999999999998875        999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH-HHHH-HhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRS-KATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ..|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++......++ ...+ ......|.+|+++|||||++++||+
T Consensus       155 ~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLa  233 (254)
T 4fn4_A          155 APYTVAKHGLIGLTRSIAAHYG-DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLA  233 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999 99999999999999988765554433 2233 3344567899999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      |+.++|+|||.|.+|
T Consensus       234 Sd~a~~iTG~~i~VD  248 (254)
T 4fn4_A          234 SDEASFVNGDAVVVD  248 (254)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CchhcCCcCCEEEeC
Confidence            999999999999998

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.3e-61  Score=388.87  Aligned_cols=241  Identities=29%  Similarity=0.325  Sum_probs=218.9

Q ss_pred             CCCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976            1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus         1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      |+.|   ++|+||+++||||++|||+++++.|+++|++|++++|+..  ++..+++.+.+.++..+.+|++|++++++++
T Consensus         1 M~n~---f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~   75 (247)
T 4hp8_A            1 MKNP---FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSF   75 (247)
T ss_dssp             --CT---TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSS
T ss_pred             CcCC---cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHH
Confidence            5655   4699999999999999999999999999999999999865  4566777777889999999999999988876


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +     +|++|+||||||+....++.+.++++|++.+++|+.++|+++|+++|+|.+++.       +|+||++||..+.
T Consensus        76 ~-----~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~-------~G~IVnisS~~~~  143 (247)
T 4hp8_A           76 T-----DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGR-------SGKVVNIASLLSF  143 (247)
T ss_dssp             T-----TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGT
T ss_pred             H-----hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC-------CcEEEEEechhhC
Confidence            4     489999999999988899999999999999999999999999999999987643       4999999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+.+....|++||+|+.+|+|+|+.||+ ++|||||+|+||+++|++......+++..+.+.+..|++|+++|||||+++
T Consensus       144 ~g~~~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v  222 (247)
T 4hp8_A          144 QGGIRVPSYTAAKHGVAGLTKLLANEWA-AKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAA  222 (247)
T ss_dssp             SCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999 999999999999999887655555566667778889999999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.++|+|||.|.+|
T Consensus       223 ~fLaSd~a~~iTG~~i~VD  241 (247)
T 4hp8_A          223 VFLSSAAADYVHGAILNVD  241 (247)
T ss_dssp             HHHTSGGGTTCCSCEEEES
T ss_pred             HHHhCchhcCCcCCeEEEC
Confidence            9999999999999999998

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=4.7e-60  Score=388.02  Aligned_cols=237  Identities=28%  Similarity=0.418  Sum_probs=215.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++   +.++..+++|++|+++++++++++.+.||
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999999999999888877776   56788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      +||+||||||+....++.+.++++|++.+++|+.++|+++|+++|+|++.          |+||++||..+..+.+....
T Consensus       103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~----------G~IInisS~~~~~~~~~~~~  172 (273)
T 4fgs_A          103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG----------SSVVLTGSTAGSTGTPAFSV  172 (273)
T ss_dssp             CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE----------EEEEEECCGGGGSCCTTCHH
T ss_pred             CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC----------CeEEEEeehhhccCCCCchH
Confidence            99999999999888999999999999999999999999999999999653          88999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-----hHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      |++||+|+.+|+|+|+.||+ ++|||||+|+||+++|++......     .++..+.+.+..|++|+++|||||++++||
T Consensus       173 Y~asKaav~~ltr~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FL  251 (273)
T 4fgs_A          173 YAASKAALRSFARNWILDLK-DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFL  251 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999 999999999999999877544332     133445677889999999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +|+.++|+|||.|.+|
T Consensus       252 aSd~a~~iTG~~i~VD  267 (273)
T 4fgs_A          252 ASDDSSFVTGAELFVD  267 (273)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             hCchhcCccCCeEeEC
Confidence            9999999999999998

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.1e-58  Score=378.16  Aligned_cols=240  Identities=28%  Similarity=0.296  Sum_probs=213.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++|+||+++||||++|||+++++.|+++|++|++++|+.+..+ ..+++.+.+.++.++.+|++|+++++++++++.+.|
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999999999999987654 445566667789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||+..... .+.+.++|++.+++|+.++++++|+++|+|++++         |+||++||..+..+.+...
T Consensus        82 G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~---------G~IVnisS~~~~~~~~~~~  151 (258)
T 4gkb_A           82 GRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR---------GAIVNISSKTAVTGQGNTS  151 (258)
T ss_dssp             SCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCTHHHHCCSSCH
T ss_pred             CCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---------CeEEEEeehhhccCCCCch
Confidence            99999999999865444 4789999999999999999999999999997653         9999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC----hHHHHHHhhhhccCC-CCCCHHHHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAY-KFGEKWDIAMAALY  242 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~dva~~~~~  242 (259)
                      .|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++......    +++..+.+....|++ |+++|||||++++|
T Consensus       152 ~Y~asKaav~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~f  230 (258)
T 4gkb_A          152 GYCASKGAQLALTREWAVALR-EHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVF  230 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999 999999999999999887654332    234455667778885 99999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.++|+|||.|.+|
T Consensus       231 LaS~~a~~iTG~~i~VD  247 (258)
T 4gkb_A          231 LLSPRASHTTGEWLFVD  247 (258)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCchhcCccCCeEEEC
Confidence            99999999999999998

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=8e-59  Score=373.38  Aligned_cols=230  Identities=29%  Similarity=0.362  Sum_probs=206.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..++||+++||||++|||+++++.|+++|++|++++|+.+.+++      ..+.++..+.+|++|+++++++++    .+
T Consensus         7 dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~   76 (242)
T 4b79_A            7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----AL   76 (242)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hc
Confidence            44799999999999999999999999999999999999776543      235578999999999999988775    57


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||+.  .++.+.+.++|++.+++|+.++|+++|+++|+|++++         |+||++||..+..+.+...
T Consensus        77 g~iDiLVNNAGi~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~---------G~IVnisS~~~~~~~~~~~  145 (242)
T 4b79_A           77 PRLDVLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG---------GSILNIASMYSTFGSADRP  145 (242)
T ss_dssp             SCCSEEEECCCCC--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC---------EEEEEECCGGGTSCCSSCH
T ss_pred             CCCCEEEECCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---------CeEEEEeeccccCCCCCCH
Confidence            9999999999975  4567889999999999999999999999999998653         9999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+|+.+|+|+|+.||+ ++|||||+|+||+++|++......+++..+.+.+..|++|+++|||||++++||+|+.
T Consensus       146 ~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~  224 (242)
T 4b79_A          146 AYSASKGAIVQLTRSLACEYA-AERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPG  224 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999 9999999999999998876665666777788888999999999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ++|+|||.|.+|
T Consensus       225 a~~iTG~~l~VD  236 (242)
T 4b79_A          225 ASFVTGAVLAVD  236 (242)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hcCccCceEEEC
Confidence            999999999998

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.7e-57  Score=369.67  Aligned_cols=242  Identities=23%  Similarity=0.225  Sum_probs=222.4

Q ss_pred             CCCCCCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      |++|+||+++||||+|  |||+++|+.|+++|++|++++|+++.++++.+++.+.+ .++.++++|++|+++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            5789999999999875  99999999999999999999999999999888887654 57999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           84 INHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      .+.||++|+||||||+...    .++.+.++++|...+++|+.+++.+++.+.+++.+          +|+||++||..+
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~----------~G~IVnisS~~~  150 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE----------GGSIVATTYLGG  150 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT----------CEEEEEEECGGG
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCEEEEEecccc
Confidence            9999999999999997543    45568889999999999999999999999887654          399999999999


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      ..+.+....|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++.......++..+.+.+..|++|+++|||||++
T Consensus       151 ~~~~~~~~~Y~asKaal~~ltr~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~  229 (256)
T 4fs3_A          151 EFAVQNYNVMGVAKASLEANVKYLALDLG-PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKT  229 (256)
T ss_dssp             TSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred             ccCcccchhhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999 99999999999999987766655667777888889999999999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+|+.++|+|||.|.+|
T Consensus       230 v~fL~Sd~a~~iTG~~i~VD  249 (256)
T 4fs3_A          230 AAYLLSDLSSGVTGENIHVD  249 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHhCchhcCccCCEEEEC
Confidence            99999999999999999998

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.2e-56  Score=363.12  Aligned_cols=225  Identities=24%  Similarity=0.286  Sum_probs=204.6

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|++|||||++|||+++|+.|+++|++|++++|+++.+++..    +.+.++.++++|++|+++++++++++.+.||++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999999999999977665443    3356789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +||||||+....++.+.+.++|++.+++|+.++|+++|+++|+|.+++         |+||++||..+..+.+....|++
T Consensus        78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~---------G~IInisS~~~~~~~~~~~~Y~a  148 (247)
T 3ged_A           78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK---------GRIINIASTRAFQSEPDSEAYAS  148 (247)
T ss_dssp             EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---------CEEEEECCGGGTSCCTTCHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC---------CcEEEEeecccccCCCCCHHHHH
Confidence            999999998889999999999999999999999999999999998763         99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHR  251 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  251 (259)
                      ||+|+.+|+|+||.|++ + |||||+|+||+++|++..      +..+...+..|++|+++|||||++++||+|+  +|+
T Consensus       149 sKaal~~ltk~lA~ela-~-~IrVN~I~PG~i~t~~~~------~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~i  218 (247)
T 3ged_A          149 AKGGIVALTHALAMSLG-P-DVLVNCIAPGWINVTEQQ------EFTQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFI  218 (247)
T ss_dssp             HHHHHHHHHHHHHHHHT-T-TSEEEEEEECSBCCCC---------CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSC
T ss_pred             HHHHHHHHHHHHHHHHC-C-CCEEEEEecCcCCCCCcH------HHHHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCC
Confidence            99999999999999998 7 899999999999976532      2233445678999999999999999999984  699


Q ss_pred             cccccccC
Q 024976          252 DLIHLLDD  259 (259)
Q Consensus       252 tG~~i~~D  259 (259)
                      |||.|.+|
T Consensus       219 TG~~i~VD  226 (247)
T 3ged_A          219 TGETIIVD  226 (247)
T ss_dssp             CSCEEEES
T ss_pred             CCCeEEEC
Confidence            99999998

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.3e-56  Score=366.96  Aligned_cols=234  Identities=20%  Similarity=0.214  Sum_probs=207.0

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++|+||+++||||++|||+++++.|+++|++|++++|+.++          ...+..++++|++++++++++++++.+.
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            358999999999999999999999999999999999997542          1223557899999999999999999999


Q ss_pred             cCCccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           87 FGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        87 ~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      ||++|+||||||+..  ..++.+.++++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+
T Consensus        76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--------G~Iv~isS~~~~~~~~  147 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGS--------GVVVHVTSIQRVLPLP  147 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCT
T ss_pred             cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCC--------ceEEEEEehhhccCCC
Confidence            999999999999754  457889999999999999999999999999999998875        9999999999998876


Q ss_pred             -cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---------CCh---HHHHHHhhhhccCCCCC
Q 024976          165 -YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAP---EEIRSKATDYMAAYKFG  231 (259)
Q Consensus       165 -~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---------~~~---~~~~~~~~~~~~~~~~~  231 (259)
                       ....|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++....         ...   ++.........|++|++
T Consensus       148 ~~~~~Y~asKaal~~lt~~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g  226 (261)
T 4h15_A          148 ESTTAYAAAKAALSTYSKAMSKEVS-PKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPA  226 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCB
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCc
Confidence             578899999999999999999999 9999999999999998753221         111   22334455678999999


Q ss_pred             CHHHHHHHHHHhcCccCCcccccccccC
Q 024976          232 EKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       232 ~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|||||++++||+|+.++|+|||.|.+|
T Consensus       227 ~peevA~~v~fLaS~~a~~itG~~i~VD  254 (261)
T 4h15_A          227 KPEEVANLIAFLASDRAASITGAEYTID  254 (261)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CHHHHHHHHHHHhCchhcCccCcEEEEC
Confidence            9999999999999999999999999998

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-53  Score=346.90  Aligned_cols=245  Identities=27%  Similarity=0.334  Sum_probs=225.3

Q ss_pred             CCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHHH
Q 024976            4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      |.+++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ .++.++.+|++|++++++++++
T Consensus         2 p~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (262)
T 3pk0_A            2 PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR   81 (262)
T ss_dssp             -CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH
Confidence            456778999999999999999999999999999999999999999999988887665 6799999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-c
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-T  161 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~  161 (259)
                      +.+.+|++|+||||||.....++.+.++++|++.+++|+.++++++|+++|+|++++.        |+||++||..+. .
T Consensus        82 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~  153 (262)
T 3pk0_A           82 AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGS--------GRVVLTSSITGPIT  153 (262)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSS--------CEEEEECCSBTTTB
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEechhhccC
Confidence            9999999999999999988888999999999999999999999999999999988764        899999999886 7


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +.++...|++||+++++|+++++.|++ ++|||||+|+||+++|++....  .++....+....|.+|+++|+|+|++++
T Consensus       154 ~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~  230 (262)
T 3pk0_A          154 GYPGWSHYGATKAAQLGFMRTAAIELA-PHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAA  230 (262)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHH-hhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            888899999999999999999999998 8999999999999998754432  3445566777889999999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+|+.+.|+|||.|.+|
T Consensus       231 ~L~s~~~~~itG~~i~vd  248 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVD  248 (262)
T ss_dssp             HHHSGGGTTCCSCEEEES
T ss_pred             HHhCccccCCcCCEEEEC
Confidence            999999999999999987

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.2e-52  Score=344.28  Aligned_cols=242  Identities=32%  Similarity=0.418  Sum_probs=224.5

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||.....++ +.++++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.++.
T Consensus        87 ~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~  157 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGG--------GAILNISSMAGENTNVRM  157 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTCCCTTC
T ss_pred             cCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEcCHHHcCCCCCc
Confidence            9999999999998877777 8899999999999999999999999999988764        999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|++||+|+++|+++++.|++ ++|||||+|+||+++|++..... .++..+.+....|.+|+++|+|+|++++||+|+
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~  235 (256)
T 3gaf_A          158 ASYGSSKAAVNHLTRNIAFDVG-PMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSP  235 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Confidence            9999999999999999999998 89999999999999977554333 445556677788999999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.|+|||.|.+|
T Consensus       236 ~~~~itG~~i~vd  248 (256)
T 3gaf_A          236 AAAWISGQVLTVS  248 (256)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             cccCccCCEEEEC
Confidence            9999999999987

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.1e-52  Score=343.11  Aligned_cols=241  Identities=25%  Similarity=0.330  Sum_probs=224.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .++|+++||||++|||++++++|+++|++|+++ +|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+|
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999986 8888888888899888788899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.++...
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~~~  153 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGG--------GHIVSISSLGSIRYLENYTT  153 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC--------EEEEEEEEGGGTSBCTTCHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEECchhhCCCCCCcHH
Confidence            9999999999887888889999999999999999999999999999998764        99999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||+|+++|+++++.|++ ++|||||+|+||+++|++.......++..+......|.+|+++|+|+|++++||+|+.+
T Consensus       154 Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~  232 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELS-PKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKA  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999998 89999999999999987765554455666777788899999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .|+|||.|.+|
T Consensus       233 ~~itG~~i~vd  243 (258)
T 3oid_A          233 DMIRGQTIIVD  243 (258)
T ss_dssp             TTCCSCEEEES
T ss_pred             CCccCCEEEEC
Confidence            99999999987

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=9.2e-53  Score=346.65  Aligned_cols=245  Identities=24%  Similarity=0.261  Sum_probs=219.4

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cC-CCeEEEEcCCCCHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LG-IPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+ .++.++.+|++|+++++++++++
T Consensus         2 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (265)
T 3lf2_A            2 KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC   81 (265)
T ss_dssp             -CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999998888875 33 35899999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+.+|++|+||||||.....++.+.++++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.
T Consensus        82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~  153 (265)
T 3lf2_A           82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRAD--------AAIVCVNSLLASQPE  153 (265)
T ss_dssp             HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT--------EEEEEEEEGGGTSCC
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--------eEEEEECCcccCCCC
Confidence            999999999999999988888999999999999999999999999999999988764        999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC--------ChHHHHHHhhh--hccCCCCCCH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------APEEIRSKATD--YMAAYKFGEK  233 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~  233 (259)
                      +....|++||+|+++|+|+++.|++ ++|||||+|+||+++|++.....        ..+........  ..|.+|+++|
T Consensus       154 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  232 (265)
T 3lf2_A          154 PHMVATSAARAGVKNLVRSMAFEFA-PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKP  232 (265)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCH
Confidence            9999999999999999999999998 89999999999999987543322        11222222222  2799999999


Q ss_pred             HHHHHHHHHhcCccCCcccccccccC
Q 024976          234 WDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+|++++||+|+.+.|+|||.|.+|
T Consensus       233 edvA~~v~fL~s~~~~~itG~~i~vd  258 (265)
T 3lf2_A          233 IEAARAILFLASPLSAYTTGSHIDVS  258 (265)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSEEEEES
T ss_pred             HHHHHHHHHHhCchhcCcCCCEEEEC
Confidence            99999999999999999999999988

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=6.5e-53  Score=347.70  Aligned_cols=245  Identities=25%  Similarity=0.332  Sum_probs=225.8

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|++|+++++++++++.+
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999988888865 577899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||.....++.+.++++|++.+++|+.++++++++++|.|.+++.       +|+||++||..++.+.++
T Consensus        95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~  167 (266)
T 4egf_A           95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE-------GGAIITVASAAALAPLPD  167 (266)
T ss_dssp             HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTT
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CeEEEEEcchhhccCCCC
Confidence            9999999999999988888889999999999999999999999999999987642       389999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+++++.|++ ++|||||+|+||+++|++.......++....+....|.+|+.+|+|+|++++||+|
T Consensus       168 ~~~Y~asK~a~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s  246 (266)
T 4egf_A          168 HYAYCTSKAGLVMATKVLARELG-PHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLAS  246 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999998 89999999999999987655444445556667778899999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.|+|||.|.+|
T Consensus       247 ~~~~~itG~~i~vd  260 (266)
T 4egf_A          247 DAASMINGVDIPVD  260 (266)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             chhcCccCcEEEEC
Confidence            99999999999988

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=4.8e-53  Score=349.20  Aligned_cols=244  Identities=25%  Similarity=0.331  Sum_probs=226.2

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||+....++.+.++++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.++.
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iV~isS~~~~~~~~~~  172 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGY--------GKIVNIGSLTSELARATV  172 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSBCTTC
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEccHHhCCCCCCc
Confidence            999999999999988888899999999999999999999999999999998764        899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|++||+|+++|+|+++.|++ ++|||||+|+||+++|++.......++..+.+....|.+|+++|+|+|++++||+|+
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~  251 (271)
T 4ibo_A          173 APYTVAKGGIKMLTRAMAAEWA-QYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSAS  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999998 899999999999999876543322345556677788999999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.|+|||.|.+|
T Consensus       252 ~~~~itG~~i~vd  264 (271)
T 4ibo_A          252 ASDYVNGQIIYVD  264 (271)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             cccCCCCcEEEEC
Confidence            9999999999987

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.1e-52  Score=345.72  Aligned_cols=245  Identities=31%  Similarity=0.375  Sum_probs=217.0

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999999999999987788899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--c
Q 024976           86 HFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--A  162 (259)
Q Consensus        86 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~  162 (259)
                      .+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..  +
T Consensus       102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~Iv~isS~~~~~~~~  173 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGG--------GAIVVVSSINGTRTFT  173 (283)
T ss_dssp             HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCSBTTTBCC
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------ceEEEEcChhhccCCC
Confidence            9999999999999864 478899999999999999999999999999999988764        9999999999987  7


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHH-----HHHhhhhccC--CCCCCHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-----RSKATDYMAA--YKFGEKWD  235 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~d  235 (259)
                      .++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++........+.     .+......|.  +|+++|||
T Consensus       174 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~ped  252 (283)
T 3v8b_A          174 TPGATAYTATKAAQVAIVQQLALELG-KHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSED  252 (283)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHH
Confidence            78899999999999999999999998 8999999999999998765443222221     2223445566  89999999


Q ss_pred             HHHHHHHhcCccCCcccccccccC
Q 024976          236 IAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       236 va~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ||++++||+|+.+.|+|||.|.+|
T Consensus       253 vA~~v~fL~s~~a~~itG~~i~vd  276 (283)
T 3v8b_A          253 VAELIRFLVSERARHVTGSPVWID  276 (283)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHcCccccCCcCCEEEEC
Confidence            999999999999999999999988

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.6e-52  Score=343.86  Aligned_cols=244  Identities=29%  Similarity=0.360  Sum_probs=223.2

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            55689999999999999999999999999999999999999999999998877788999999999999999999999999


Q ss_pred             cCCccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCc
Q 024976           87 FGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATW  164 (259)
Q Consensus        87 ~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~  164 (259)
                      +|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+. .+.+
T Consensus        83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  154 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGG--------GSLTFTSSFVGHTAGFA  154 (280)
T ss_dssp             HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCSBTTTBCCT
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEEcChhhCcCCCC
Confidence            99999999999976 4578888999999999999999999999999999998764        899999999998 7788


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC--ChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      +...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.....  ..++....+....|.+|+++|+|+|++++|
T Consensus       155 ~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  233 (280)
T 3tox_A          155 GVAPYAASKAGLIGLVQALAVELG-ARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALY  233 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHH
Confidence            899999999999999999999998 89999999999999988755422  234455566777899999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.+.|+|||.|.+|
T Consensus       234 L~s~~a~~itG~~i~vd  250 (280)
T 3tox_A          234 LASDGASFVTGAALLAD  250 (280)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCccccCCcCcEEEEC
Confidence            99999999999999988

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=7.5e-52  Score=337.98  Aligned_cols=239  Identities=27%  Similarity=0.305  Sum_probs=218.8

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..   +..++.+|++|+++++++++++.+.
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDE   80 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999888888777743   4788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||+....++.+.++++|++.+++|+.++++++|+++|+|.+++.        |+||++||..+..+.++.
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~  152 (248)
T 3op4_A           81 FGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQ--------GRIINVGSVVGTMGNAGQ  152 (248)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTTC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEEcchhhcCCCCCC
Confidence            999999999999988888889999999999999999999999999999988764        999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|++||+|+++|+|+++.|++ ++|||||+|+||+++|++.. ... ++.........|.+|+.+|+|+|++++||+|+
T Consensus       153 ~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~-~~~-~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~  229 (248)
T 3op4_A          153 ANYAAAKAGVIGFTKSMAREVA-SRGVTVNTVAPGFIETDMTK-ALN-DEQRTATLAQVPAGRLGDPREIASAVAFLASP  229 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSTTTT-TSC-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEeeCCCCCchhh-hcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence            9999999999999999999998 89999999999999976543 333 34455566778999999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.|+|||.|.+|
T Consensus       230 ~~~~itG~~i~vd  242 (248)
T 3op4_A          230 EAAYITGETLHVN  242 (248)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             ccCCccCcEEEEC
Confidence            9999999999987

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=6.1e-52  Score=341.74  Aligned_cols=243  Identities=26%  Similarity=0.301  Sum_probs=209.8

Q ss_pred             CCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         3 ~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      .|..++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|++++++++++
T Consensus        18 g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~   94 (266)
T 3grp_A           18 GPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEV   94 (266)
T ss_dssp             ---CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHH
Confidence            356677899999999999999999999999999999999999988877776654   56799999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +.+.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+
T Consensus        95 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~Iv~isS~~~~~~  166 (266)
T 3grp_A           95 AEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRY--------GRIINITSIVGVVG  166 (266)
T ss_dssp             HHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCC-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------cEEEEECCHHHcCC
Confidence            9999999999999999988888889999999999999999999999999999988764        99999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      .++...|++||+|+++|+|+++.|++ ++|||||+|+||+++|++... . .++..+.+....|.+|+++|+|+|++++|
T Consensus       167 ~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~-~-~~~~~~~~~~~~p~~r~~~~edvA~~v~~  243 (266)
T 3grp_A          167 NPGQTNYCAAKAGLIGFSKALAQEIA-SRNITVNCIAPGFIKSAMTDK-L-NEKQKEAIMAMIPMKRMGIGEEIAFATVY  243 (266)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSHHHHT-C-CHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCcCCCchhhc-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999998 889999999999999765433 2 34455667778899999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.+.|+|||.|.+|
T Consensus       244 L~s~~~~~itG~~i~vd  260 (266)
T 3grp_A          244 LASDEAAYLTGQTLHIN  260 (266)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCccccCccCCEEEEC
Confidence            99999999999999987

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=7.5e-52  Score=341.00  Aligned_cols=242  Identities=22%  Similarity=0.317  Sum_probs=222.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             CCccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      |++|+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|.|.+++         |+||++||..+..+.+..
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~~  157 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK---------GAVVNVNSMVVRHSQAKY  157 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT---------CEEEEECCGGGGCCCTTC
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---------CEEEEECcchhccCCCcc
Confidence            9999999999985 567888999999999999999999999999999998753         899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---------ChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      ..|++||+|+++|+|+++.|++ ++|||||+|+||+++|++.....         ..++..+.+....|.+|+++|+|+|
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  236 (264)
T 3ucx_A          158 GAYKMAKSALLAMSQTLATELG-EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVA  236 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHH
Confidence            9999999999999999999999 89999999999999987543221         2345556667788999999999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++||+|+.+.|+|||.|.+|
T Consensus       237 ~~v~~L~s~~~~~itG~~i~vd  258 (264)
T 3ucx_A          237 SAILFMASDLASGITGQALDVN  258 (264)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHcCccccCCCCCEEEEC
Confidence            9999999999999999999987

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=6.1e-52  Score=342.43  Aligned_cols=241  Identities=29%  Similarity=0.357  Sum_probs=222.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999999999999988888777789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+..+.++..
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~  175 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARG--------GRIVNITSVVGSAGNPGQV  175 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTTBH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEECchhhCCCCCCch
Confidence            99999999999988888889999999999999999999999999999988764        9999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+|+++|+++++.|++ ++||+||+|+||+++|++.. .. +++....+....|.+|+++|||+|++++||+|+.
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~-~~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  252 (270)
T 3ftp_A          176 NYAAAKAGVAGMTRALAREIG-SRGITVNCVAPGFIDTDMTK-GL-PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQ  252 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSHHHH-HS-CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeCCCcCcchh-hc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCC
Confidence            999999999999999999998 89999999999999976543 22 2344556667789999999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.|+||+.|.+|
T Consensus       253 ~~~itG~~i~vd  264 (270)
T 3ftp_A          253 AGYITGTTLHVN  264 (270)
T ss_dssp             GTTCCSCEEEES
T ss_pred             cCCccCcEEEEC
Confidence            999999999987

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.5e-51  Score=340.28  Aligned_cols=244  Identities=27%  Similarity=0.385  Sum_probs=220.5

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +.+.++++|+++||||++|||++++++|+++|++|++++++ .+.+++..+++...+.++.++.+|++|+++++++++++
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   90 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQA   90 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            44567999999999999999999999999999999997664 56677888888887888999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc-cccc
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTA  162 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~-~~~~  162 (259)
                      .+.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+.          |+||++||.. +..+
T Consensus        91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----------g~iv~isS~~~~~~~  160 (270)
T 3is3_A           91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG----------GRIVLTSSNTSKDFS  160 (270)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT----------CEEEEECCTTTTTCC
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC----------CeEEEEeCchhccCC
Confidence            9999999999999999888888999999999999999999999999999999662          8899999988 5678


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC----------CCChHHHHHHhhhhccCCCCCC
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----------KLAPEEIRSKATDYMAAYKFGE  232 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~  232 (259)
                      .+....|++||+|+++|+|+++.|++ ++|||||+|+||+++|++...          ...+++..+......|.+|+++
T Consensus       161 ~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  239 (270)
T 3is3_A          161 VPKHSLYSGSKGAVDSFVRIFSKDCG-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGW  239 (270)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCC
Confidence            88899999999999999999999998 899999999999999876532          2334555666777889999999


Q ss_pred             HHHHHHHHHHhcCccCCcccccccccC
Q 024976          233 KWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+|++++||+|+.+.|+|||.|.+|
T Consensus       240 p~dvA~~v~~L~s~~~~~itG~~i~vd  266 (270)
T 3is3_A          240 PQDVANVVGFLVSKEGEWVNGKVLTLD  266 (270)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHHcCCccCCccCcEEEeC
Confidence            999999999999999999999999988

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=6.9e-52  Score=339.95  Aligned_cols=244  Identities=40%  Similarity=0.595  Sum_probs=218.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+|
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999999999999998877777899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.       .|+||++||..+..+.++...
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  155 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-------KGNIINMVATYAWDAGPGVIH  155 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------CCEEEEECCGGGGSCCTTCHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-------CcEEEEECchhhccCCCCcHH
Confidence            9999999999888888889999999999999999999999999999955432       389999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC-ChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      |++||+|+++|+|+++.|++.++|||||+|+||+++|++..... ..++..+......|.+|+++|||+|++++||+|+.
T Consensus       156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  235 (257)
T 3imf_A          156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDE  235 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            99999999999999999995245999999999999987654432 22333445567789999999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.|+||+.|.+|
T Consensus       236 ~~~itG~~i~vd  247 (257)
T 3imf_A          236 AAYINGTCMTMD  247 (257)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hcCccCCEEEEC
Confidence            999999999987

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.6e-51  Score=343.53  Aligned_cols=243  Identities=28%  Similarity=0.317  Sum_probs=223.3

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ .++.++.+|++|+++++++++++.
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999999999999987665 579999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccC
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TAT  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~  163 (259)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+. .+.
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iV~isS~~~~~~~~  186 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGR--------GRVILTSSITGPVTGY  186 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSS--------CEEEEECCSBTTTBBC
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEEeChhhccCCC
Confidence            99999999999999988888999999999999999999999999999999988764        899999999986 788


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ++...|++||+++++|+++++.|++ ++||+||+|+||+++|++... .. ++..+.+....|.+|+++|+|+|++++||
T Consensus       187 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~-~~-~~~~~~~~~~~p~~r~~~p~dvA~~v~fL  263 (293)
T 3rih_A          187 PGWSHYGASKAAQLGFMRTAAIELA-PRGVTVNAILPGNILTEGLVD-MG-EEYISGMARSIPMGMLGSPVDIGHLAAFL  263 (293)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHH-TC-HHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEecCCCcCcchhh-cc-HHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            8899999999999999999999998 899999999999999765432 22 34556667788999999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +|+.+.|+||+.|.+|
T Consensus       264 ~s~~a~~itG~~i~vd  279 (293)
T 3rih_A          264 ATDEAGYITGQAIVVD  279 (293)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             hCccccCCCCCEEEEC
Confidence            9999999999999987

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=6.6e-52  Score=343.59  Aligned_cols=245  Identities=41%  Similarity=0.616  Sum_probs=222.6

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .+.+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|++|+++++++++++.
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999888888887753 46789999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+..+.+
T Consensus       101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~  172 (277)
T 4fc7_A          101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHG--------GVIVNITATLGNRGQA  172 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC--------EEEEEECCSHHHHTCT
T ss_pred             HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEECchhhCCCCC
Confidence            99999999999999887888889999999999999999999999999999987654        8999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC-ChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ....|++||+|+++|+|+++.|++ ++|||||+|+||+++|++..... .+++.........|.+|+++|+|+|++++||
T Consensus       173 ~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL  251 (277)
T 4fc7_A          173 LQVHAGSAKAAVDAMTRHLAVEWG-PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYL  251 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999998 89999999999999987543332 2344555667778999999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +|+.++|+|||.|.+|
T Consensus       252 ~s~~~~~itG~~i~vd  267 (277)
T 4fc7_A          252 ASPLASYVTGAVLVAD  267 (277)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             cCCccCCcCCCEEEEC
Confidence            9999999999999988

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=9.5e-52  Score=342.96  Aligned_cols=244  Identities=25%  Similarity=0.343  Sum_probs=220.4

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             ------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999887888999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHH--HHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK--YLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|  .|++++.        |+||++||..+..+.+
T Consensus        99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~--------g~iV~isS~~~~~~~~  170 (279)
T 3sju_A           99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGW--------GRIVNIASTGGKQGVM  170 (279)
T ss_dssp             HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTC--------EEEEEECCGGGTSCCT
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCC--------cEEEEECChhhccCCC
Confidence            99999999999998888888999999999999999999999999999  5777654        8999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---------CChHHHHHHhhhhccCCCCCCHHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWD  235 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d  235 (259)
                      +...|++||+|+++|+++++.|++ ++||+||+|+||+++|++....         ..+++..+.+....|.+|+++|+|
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  249 (279)
T 3sju_A          171 YAAPYTASKHGVVGFTKSVGFELA-KTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEE  249 (279)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHH-hhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHH
Confidence            999999999999999999999998 8999999999999998653221         134566677778889999999999


Q ss_pred             HHHHHHHhcCccCCcccccccccC
Q 024976          236 IAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       236 va~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|++++||+|+.+.|+|||.|.+|
T Consensus       250 vA~~v~~L~s~~a~~itG~~i~vd  273 (279)
T 3sju_A          250 VAGLVGYLVTDAAASITAQALNVC  273 (279)
T ss_dssp             HHHHHHHHTSSGGGGCCSCEEEES
T ss_pred             HHHHHHHHhCccccCcCCcEEEEC
Confidence            999999999999999999999987

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4.5e-51  Score=333.06  Aligned_cols=239  Identities=27%  Similarity=0.346  Sum_probs=219.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +.+|+++||||++|||++++++|+++|++|+++++ +.+.+++..+++...+.++.++.+|++|+++++++++++.+.+|
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999998877 45677888888887788899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.++...
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~  153 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRS--------GAIINLSSVVGAVGNPGQAN  153 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTTCHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEEcchhhcCCCCCChH
Confidence            9999999999988888899999999999999999999999999999988764        99999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|++.. .. .++..+......|.+|+++|+|+|++++||+|+.+
T Consensus       154 Y~~sK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~-~~-~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~  230 (246)
T 3osu_A          154 YVATKAGVIGLTKSAARELA-SRGITVNAVAPGFIVSDMTD-AL-SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKA  230 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBGGGCCS-CS-CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECCCcCCccc-cc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999998 89999999999999977543 33 34555666778899999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .|+||+.|.+|
T Consensus       231 ~~itG~~i~vd  241 (246)
T 3osu_A          231 KYITGQTIHVN  241 (246)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCCCCEEEeC
Confidence            99999999987

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=5.9e-51  Score=339.41  Aligned_cols=243  Identities=26%  Similarity=0.330  Sum_probs=215.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC----------------hhhHHHHHHHHHhcCCCeEEEEcCCC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----------------KTVLRSAVAALHSLGIPAIGLEGDVR   71 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~----------------~~~~~~~~~~~~~~~~~v~~~~~Dl~   71 (259)
                      ..++||+++||||++|||++++++|+++|++|++++|+                .+.+++..+++...+.++.++.+|++
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            46899999999999999999999999999999999887                66777777888777888999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCC-CCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 024976           72 KREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI  150 (259)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~  150 (259)
                      |+++++++++++.+.+|++|+||||||+.... ++.+.+.++|++.+++|+.++++++|+++|+|.+++.       +|+
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~  159 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR-------GGS  159 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC-------CcE
Confidence            99999999999999999999999999987655 4788999999999999999999999999999987642       389


Q ss_pred             EEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC------------CChHHHH
Q 024976          151 IINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------------LAPEEIR  218 (259)
Q Consensus       151 iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~------------~~~~~~~  218 (259)
                      ||++||..+..+.+....|++||+|+++|+++++.|++ ++|||||+|+||+++|++....            ..+.+..
T Consensus       160 iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T 3uve_A          160 IILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELG-QHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA  238 (286)
T ss_dssp             EEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred             EEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccCCcccccchhhhccccccccchhhHH
Confidence            99999999999999999999999999999999999998 8999999999999998765421            1111111


Q ss_pred             H--HhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          219 S--KATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       219 ~--~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      .  ......| +|+++|+|+|++++||+|+.++|+|||.|.+|
T Consensus       239 ~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vd  280 (286)
T 3uve_A          239 PICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPID  280 (286)
T ss_dssp             HHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeEC
Confidence            1  2344566 88999999999999999999999999999998

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.6e-51  Score=342.00  Aligned_cols=243  Identities=27%  Similarity=0.371  Sum_probs=222.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC---CeEEEEcCCCCHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.   ++.++.+|++|+++++++++++.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            568999999999999999999999999999999999999999999998876654   78999999999999999999999


Q ss_pred             HHcCCccEEEECCCC-CCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           85 NHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      +.+|++|+||||||. ....++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+..+.
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~  158 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGG--------GSFVGISSIAASNTH  158 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------EEEEEECCHHHHSCC
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEeCHHHcCCC
Confidence            999999999999997 45678889999999999999999999999999999988764        899999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +....|++||+++++|+|+++.|++ ++|||||+|+||+++|++.......++....+....|.+|+++|+|+|++++||
T Consensus       159 ~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l  237 (281)
T 3svt_A          159 RWFGAYGVTKSAVDHLMQLAADELG-ASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFL  237 (281)
T ss_dssp             TTCTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999998 899999999999999876544333455566677788999999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +|+.+.|+||+.|.+|
T Consensus       238 ~s~~~~~itG~~~~vd  253 (281)
T 3svt_A          238 LSDAASFVTGQVINVD  253 (281)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             hCcccCCCCCCEEEeC
Confidence            9999999999999987

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-50  Score=336.71  Aligned_cols=246  Identities=26%  Similarity=0.321  Sum_probs=215.3

Q ss_pred             CCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC------------hhhHHHHHHHHHhcCCCeEEEEcCCC
Q 024976            4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVR   71 (259)
Q Consensus         4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~   71 (259)
                      |.+|.++++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++
T Consensus         2 p~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   81 (281)
T 3s55_A            2 PGSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK   81 (281)
T ss_dssp             ----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCcccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence            556778999999999999999999999999999999999997            55667777777777888999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceE
Q 024976           72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII  151 (259)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i  151 (259)
                      |+++++++++++.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+|
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~i  153 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNY--------GRI  153 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEE
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEE
Confidence            999999999999999999999999999988888999999999999999999999999999999988764        999


Q ss_pred             EEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-----CC-------hHHHHH
Q 024976          152 INISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----LA-------PEEIRS  219 (259)
Q Consensus       152 v~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-----~~-------~~~~~~  219 (259)
                      |++||..+..+.++...|++||+|+++|+|+++.|++ ++|||||+|+||+++|++....     ..       ..+...
T Consensus       154 v~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (281)
T 3s55_A          154 VTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLV-GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVES  232 (281)
T ss_dssp             EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHH
T ss_pred             EEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccccchhhhccccccccccchhHHHH
Confidence            9999999999999999999999999999999999998 8999999999999998865421     10       111111


Q ss_pred             H--hhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          220 K--ATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       220 ~--~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      .  .....+ +|+++|+|+|++++||+|+.+.|+||+.|.+|
T Consensus       233 ~~~~~~~~~-~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vd  273 (281)
T 3s55_A          233 VFASLHLQY-APFLKPEEVTRAVLFLVDEASSHITGTVLPID  273 (281)
T ss_dssp             HHHHHCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHhhhccC-cCCCCHHHHHHHHHHHcCCcccCCCCCEEEEC
Confidence            1  122233 78999999999999999999999999999987

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2.8e-51  Score=339.51  Aligned_cols=241  Identities=24%  Similarity=0.332  Sum_probs=220.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--cc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WY  165 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~  165 (259)
                      |++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|.|.+++.       +|+||++||..+..+.  +.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~-------~g~iv~isS~~~~~~~~~~~  180 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL-------GGTIITTASMSGHIINIPQQ  180 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCCSSC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CcEEEEECchHhcccCCCCC
Confidence            99999999999988888889999999999999999999999999999987653       4899999999887654  35


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+++++.|++ ++|||||+|+||+++|++....   .+....+....|.+|+++|+|+|++++||+|
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  256 (276)
T 3r1i_A          181 VSHYCTSKAAVVHLTKAMAVELA-PHQIRVNSVSPGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYLAS  256 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSTTTGGG---GGGHHHHGGGSTTSSCBCGGGSHHHHHHHHS
T ss_pred             cchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcCCccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            78899999999999999999998 8999999999999998765432   2234455677899999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.|+|||.|.+|
T Consensus       257 ~~~~~itG~~i~vd  270 (276)
T 3r1i_A          257 AASSYMTGSDIVID  270 (276)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             ccccCccCcEEEEC
Confidence            99999999999988

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.8e-51  Score=335.60  Aligned_cols=240  Identities=28%  Similarity=0.356  Sum_probs=215.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4588999999999999999999999999999999999998888777766   5679999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||.....++.+.++++|++.+++|+.++++++|+++|+|++++.       .|+||++||..+..+.++..
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~  151 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK-------AGRVISIASNTFFAGTPNMA  151 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCTHHHHTCTTCH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-------CcEEEEECchhhccCCCCch
Confidence            99999999999988888889999999999999999999999999999987652       38999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+|+++|+++++.|++ ++|||||+|+||+++|++... ..++..........|.+|+++|+|+|++++||+|+.
T Consensus       152 ~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~  229 (247)
T 3rwb_A          152 AYVAAKGGVIGFTRALATELG-KYNITANAVTPGLIESDGVKA-SPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDD  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-SGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCcCccccc-cChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999998 899999999999999765433 222222222233378899999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.|+|||.|.+|
T Consensus       230 ~~~itG~~i~vd  241 (247)
T 3rwb_A          230 ARWITGQTLNVD  241 (247)
T ss_dssp             GTTCCSCEEEES
T ss_pred             ccCCCCCEEEEC
Confidence            999999999988

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-51  Score=338.67  Aligned_cols=242  Identities=28%  Similarity=0.357  Sum_probs=219.2

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++...+.++.++.+|++|+++++++.+ ..+.
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~~~  103 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAA  103 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH-HHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-HHHh
Confidence            356899999999999999999999999999999999965 55677778887777789999999999999999955 4556


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|.|++++.        |+||++||..+..+.++.
T Consensus       104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~IV~isS~~~~~~~~~~  175 (273)
T 3uf0_A          104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGS--------GRIVTIASMLSFQGGRNV  175 (273)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCSSC
T ss_pred             cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEcchHhcCCCCCC
Confidence            799999999999988888899999999999999999999999999999988765        999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|++||+|+++|+|+++.|++ ++||+||+|+||+++|++.......++....+....|.+|+++|+|+|++++||+|+
T Consensus       176 ~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~  254 (273)
T 3uf0_A          176 AAYAASKHAVVGLTRALASEWA-GRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASD  254 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999998 899999999999999876544434455566677788999999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.|+|||.|.+|
T Consensus       255 ~a~~itG~~i~vd  267 (273)
T 3uf0_A          255 AASYVHGQVLAVD  267 (273)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             hhcCCcCCEEEEC
Confidence            9999999999987

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.1e-50  Score=339.84  Aligned_cols=243  Identities=26%  Similarity=0.356  Sum_probs=215.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC------------hhhHHHHHHHHHhcCCCeEEEEcCCCCHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVRKRED   75 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~   75 (259)
                      .+++||+++||||++|||++++++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++|+++
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            46899999999999999999999999999999999987            667778888888778889999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCC-CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 024976           76 AVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI  154 (259)
Q Consensus        76 ~~~~~~~~~~~~g~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i  154 (259)
                      ++++++++.+.+|++|+||||||+..... +.+.+.++|++.+++|+.++++++++++|.|.+++.       +|+||++
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-------~g~Iv~i  176 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR-------GGSIVFT  176 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS-------CEEEEEE
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEE
Confidence            99999999999999999999999876654 889999999999999999999999999999887642       3899999


Q ss_pred             ccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC------------ChHHH--HHH
Q 024976          155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------------APEEI--RSK  220 (259)
Q Consensus       155 sS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~------------~~~~~--~~~  220 (259)
                      ||..+..+.+....|++||+|+++|+++++.|++ ++||+||+|+||+++|++.....            .....  ...
T Consensus       177 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (299)
T 3t7c_A          177 SSIGGLRGAENIGNYIASKHGLHGLMRTMALELG-PRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR  255 (299)
T ss_dssp             CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH
T ss_pred             CChhhccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhh
Confidence            9999999999999999999999999999999998 88999999999999987654211            01111  112


Q ss_pred             hhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          221 ATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       221 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      .....| +|+++|+|||++++||+|+.++|+|||.|.+|
T Consensus       256 ~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vd  293 (299)
T 3t7c_A          256 QMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVD  293 (299)
T ss_dssp             HHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeC
Confidence            334455 78999999999999999999999999999988

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.4e-51  Score=336.33  Aligned_cols=239  Identities=23%  Similarity=0.289  Sum_probs=214.9

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .|.+++||+++||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++.+|++|+++++++++++.+
T Consensus         2 ~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            2 VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999998888877776   45789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||.....++.+.++++|++.+++|+.++++++|+++|+|++.          |+||++||..+..+.++
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----------g~iv~isS~~~~~~~~~  148 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG----------GSIVFTSSVADEGGHPG  148 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEECCGGGSSBCTT
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC----------CEEEEECChhhcCCCCC
Confidence            99999999999999888888999999999999999999999999999988653          88999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH----HHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE----EIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      ...|++||+|+++|+|+++.|++ ++|||||+|+||+++|++......++    +..+......|.+|+++|||+|++++
T Consensus       149 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  227 (255)
T 4eso_A          149 MSVYSASKAALVSFASVLAAELL-PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVL  227 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999998 88999999999999987654322222    22334556789999999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+|+ ++|+|||.|.+|
T Consensus       228 ~L~s~-~~~itG~~i~vd  244 (255)
T 4eso_A          228 FLAFE-ATFTTGAKLAVD  244 (255)
T ss_dssp             HHHHT-CTTCCSCEEEES
T ss_pred             HHcCc-CcCccCCEEEEC
Confidence            99999 999999999988

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1e-50  Score=335.37  Aligned_cols=239  Identities=30%  Similarity=0.399  Sum_probs=217.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999998888877776   5678999999999999999999999999


Q ss_pred             CCccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           88 GKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        88 g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      |++|+||||||...  ..++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+.
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~  155 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGG--------GAIVNISSATAHAAYDM  155 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTSBCSS
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEECCHHHcCCCCC
Confidence            99999999999863  456678999999999999999999999999999988764        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++..... +++....+....|.+|+++|+|+|++++||+|
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s  233 (271)
T 3tzq_B          156 STAYACTKAAIETLTRYVATQYG-RHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLAS  233 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999998 89999999999999987655444 34555667778899999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.|+|||.|.+|
T Consensus       234 ~~~~~itG~~i~vd  247 (271)
T 3tzq_B          234 DRAAFITGQVIAAD  247 (271)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             cccCCcCCCEEEEC
Confidence            99999999999987

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.9e-51  Score=340.56  Aligned_cols=242  Identities=23%  Similarity=0.290  Sum_probs=212.7

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+
T Consensus        23 ~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           23 NHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             ----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHH
Confidence            335689999999999999999999999999999999999998888777766   56789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||+....++.+.++++|++.+++|+.++++++|+++|.|++++.        |+||++||..+..+.++
T Consensus       100 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~Iv~isS~~~~~~~~~  171 (277)
T 3gvc_A          100 AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGG--------GAIVNLSSLAGQVAVGG  171 (277)
T ss_dssp             HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTSCCTT
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEcchhhccCCCC
Confidence            9999999999999988888999999999999999999999999999999988764        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhh---hccCCCCCCHHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATD---YMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~dva~~~  240 (259)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++......  +.........   ..|.+|+++|||+|+++
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  250 (277)
T 3gvc_A          172 TGAYGMSKAGIIQLSRITAAELR-SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIV  250 (277)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHH
Confidence            99999999999999999999998 899999999999999875332111  1111122222   45678999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.+.|+|||.|.+|
T Consensus       251 ~~L~s~~a~~itG~~i~vd  269 (277)
T 3gvc_A          251 VFLLSDDASMITGTTQIAD  269 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHcCCccCCccCcEEEEC
Confidence            9999999999999999988

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.5e-50  Score=335.38  Aligned_cols=243  Identities=28%  Similarity=0.394  Sum_probs=218.6

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTT   96 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Confidence            4446789999999999999999999999999999999999988877777664   5678999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|.|++++.        |+||++||..+..+.+
T Consensus        97 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~  168 (277)
T 4dqx_A           97 AKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGG--------GSIINTTSYTATSAIA  168 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTC--------EEEEEECCGGGTSCCT
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------cEEEEECchhhCcCCC
Confidence            99999999999999888888899999999999999999999999999999987764        8999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC----CChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      +...|++||+|+++|+++++.|++ ++||+||+|+||+++|++....    .........+....|.+|+++|+|+|+++
T Consensus       169 ~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  247 (277)
T 4dqx_A          169 DRTAYVASKGAISSLTRAMAMDHA-KEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAM  247 (277)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHH
Confidence            999999999999999999999998 8999999999999998753221    12233334466778899999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.+.|+||+.|.+|
T Consensus       248 ~~L~s~~~~~itG~~i~vd  266 (277)
T 4dqx_A          248 LFLASDRSRFATGSILTVD  266 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCCccCCCcCCEEEEC
Confidence            9999999999999999987

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=5.4e-51  Score=338.17  Aligned_cols=243  Identities=28%  Similarity=0.427  Sum_probs=215.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-------------ChhhHHHHHHHHHhcCCCeEEEEcCCCCHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-------------RKTVLRSAVAALHSLGIPAIGLEGDVRKRE   74 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-------------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   74 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|             +.+.+++..+++...+.++.++.+|++|++
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            4689999999999999999999999999999999998             566777777888777888999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 024976           75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI  154 (259)
Q Consensus        75 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i  154 (259)
                      +++++++++.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.       +|+||++
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-------~g~iv~i  159 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR-------GGSIILI  159 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-------CCEEEEE
Confidence            999999999999999999999999988888889999999999999999999999999999987642       3899999


Q ss_pred             ccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC---------hHHHHHHhhhhc
Q 024976          155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDYM  225 (259)
Q Consensus       155 sS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~---------~~~~~~~~~~~~  225 (259)
                      ||..+..+.+....|++||+|+++|+++++.|++ ++|||||+|+||+++|++......         .++....+....
T Consensus       160 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (277)
T 3tsc_A          160 SSAAGMKMQPFMIHYTASKHAVTGLARAFAAELG-KHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFL  238 (277)
T ss_dssp             CCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSS
T ss_pred             ccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhcc
Confidence            9999999999999999999999999999999998 899999999999999876433111         011112223344


Q ss_pred             cCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          226 AAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       226 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |. |+.+|||+|++++||+|+.+.|+|||.|.+|
T Consensus       239 p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  271 (277)
T 3tsc_A          239 PD-WVAEPEDIADTVCWLASDESRKVTAAQIPVD  271 (277)
T ss_dssp             SC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeC
Confidence            54 7899999999999999999999999999988

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1e-50  Score=333.36  Aligned_cols=242  Identities=29%  Similarity=0.330  Sum_probs=218.4

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   79 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEH   79 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999998888777776   456899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||.....++.+.++++|++.+++|+.++++++++++|.|.+++.       +|+||++||..+..+.+..
T Consensus        80 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  152 (259)
T 4e6p_A           80 AGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGR-------GGKIINMASQAGRRGEALV  152 (259)
T ss_dssp             SSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTB
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CeEEEEECChhhccCCCCC
Confidence            999999999999988888889999999999999999999999999999987642       3899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---------CChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      ..|++||+++++|+++++.|++ ++||+||+|+||+++|++....         ...++....+.+..|.+|+++|+|+|
T Consensus       153 ~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva  231 (259)
T 4e6p_A          153 AIYCATKAAVISLTQSAGLDLI-KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLT  231 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHH
Confidence            9999999999999999999998 8999999999999998754321         11334445566778999999999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++||+|+.+.|+|||.|.+|
T Consensus       232 ~~v~~L~s~~~~~itG~~i~vd  253 (259)
T 4e6p_A          232 GMAIFLASAESDYIVSQTYNVD  253 (259)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEES
T ss_pred             HHHHHHhCCccCCCCCCEEEEC
Confidence            9999999999999999999987

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=3.4e-51  Score=337.85  Aligned_cols=241  Identities=28%  Similarity=0.353  Sum_probs=219.0

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      |..+++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.+|++|+++++++++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            3346789999999999999999999999999999999988 566777888888877888999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+..+.
T Consensus       101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~  172 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRS--------GRIINIASVVGEMGN  172 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCHHHHHCC
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECchhhcCCC
Confidence            999999999999999988888889999999999999999999999999999988764        899999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++..     ....+...+..|.+|+++|+|+|++++||
T Consensus       173 ~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~-----~~~~~~~~~~~p~~r~~~~~dvA~~v~~l  246 (269)
T 4dmm_A          173 PGQANYSAAKAGVIGLTKTVAKELA-SRGITVNAVAPGFIATDMTS-----ELAAEKLLEVIPLGRYGEAAEVAGVVRFL  246 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBTTSCSC-----HHHHHHHGGGCTTSSCBCHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEECCCcCcccc-----cccHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999998 89999999999999987542     22235566778999999999999999999


Q ss_pred             cCc-cCCcccccccccC
Q 024976          244 ASD-AAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~-~~~~~tG~~i~~D  259 (259)
                      +|+ .+.|+|||.|.+|
T Consensus       247 ~s~~~~~~itG~~i~vd  263 (269)
T 4dmm_A          247 AADPAAAYITGQVINID  263 (269)
T ss_dssp             HHCGGGGGCCSCEEEES
T ss_pred             hCCcccCCCcCCEEEEC
Confidence            998 8999999999987

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=7.6e-51  Score=337.79  Aligned_cols=244  Identities=25%  Similarity=0.310  Sum_probs=215.0

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-------------ChhhHHHHHHHHHhcCCCeEEEEcCCCCH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-------------RKTVLRSAVAALHSLGIPAIGLEGDVRKR   73 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-------------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   73 (259)
                      +.+++||+++||||++|||++++++|+++|++|++++|             +.+.+++..+++...+.++.++.+|++|+
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD   89 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            45689999999999999999999999999999999998             67778888888887788899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEE
Q 024976           74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN  153 (259)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  153 (259)
                      ++++++++++.+.+|++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.       +|+||+
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~  162 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN-------GGSIVV  162 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-------CEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CCEEEE
Confidence            9999999999999999999999999988888889999999999999999999999999999987642       389999


Q ss_pred             eccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHH------HHH--hhhhc
Q 024976          154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI------RSK--ATDYM  225 (259)
Q Consensus       154 isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~------~~~--~~~~~  225 (259)
                      +||..+..+.+....|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......+..      ...  .....
T Consensus       163 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
T 3pgx_A          163 VSSSAGLKATPGNGHYSASKHGLTALTNTLAIELG-EYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQ  241 (280)
T ss_dssp             ECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTB
T ss_pred             EcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccC
Confidence            99999999999999999999999999999999998 8999999999999998765321110111      001  12233


Q ss_pred             cCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          226 AAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       226 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |. |+.+|+|+|++++||+|+.+.|+|||.|.+|
T Consensus       242 ~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vd  274 (280)
T 3pgx_A          242 PN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVD  274 (280)
T ss_dssp             CS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEES
T ss_pred             CC-CCCCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence            44 7899999999999999999999999999987

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-51  Score=337.47  Aligned_cols=240  Identities=27%  Similarity=0.333  Sum_probs=210.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++++|+++||||++|||++++++|+++|++|+++ .|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999987 55666778888888877888999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++.          |+||++||..+..+.+..
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~----------g~iv~isS~~~~~~~~~~  172 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG----------GRIINMSTSQVGLLHPSY  172 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCTHHHHCCTTC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----------CeEEEEeChhhccCCCCc
Confidence            9999999999999888888899999999999999999999999999999653          889999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|++||+|+++|+++++.|++ ++|||||+|+||+++|++.... ..++..+.+....|.+|+++|+|+|++++||+|+
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  250 (267)
T 3u5t_A          173 GIYAAAKAGVEAMTHVLSKELR-GRDITVNAVAPGPTATDLFLEG-KSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGP  250 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT-TSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHST
T ss_pred             hHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEEECCCcCcccccc-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999998 8999999999999998765433 2334455666778999999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.|+|||.|.+|
T Consensus       251 ~~~~itG~~i~vd  263 (267)
T 3u5t_A          251 DGAWVNGQVLRAN  263 (267)
T ss_dssp             TTTTCCSEEEEES
T ss_pred             cccCccCCEEEeC
Confidence            9999999999988

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-50  Score=335.30  Aligned_cols=244  Identities=27%  Similarity=0.362  Sum_probs=211.5

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ++++++|+++||||++|||++++++|+++|++|++++| +.+.++...+++... +.++.++.+|++|+++++++++++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999 566777777887654 5679999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.+
T Consensus       100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~  171 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGW--------GRIINIASAHGLVASP  171 (281)
T ss_dssp             HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCT
T ss_pred             HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEECCcccccCCC
Confidence            99999999999999988888889999999999999999999999999999988765        9999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH---------H-HHHHhhhhccCCCCCCHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---------E-IRSKATDYMAAYKFGEKW  234 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~  234 (259)
                      ....|++||+|+++|+++++.|++ ++||+||+|+||+++|++........         + ..+.+.+..|.+|+++|+
T Consensus       172 ~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~e  250 (281)
T 3v2h_A          172 FKSAYVAAKHGIMGLTKTVALEVA-ESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVE  250 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC----------------------------CCTTCSCBCHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHH
Confidence            999999999999999999999998 89999999999999987654432211         1 122345667899999999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |+|++++||+|+.+.|+||+.|.+|
T Consensus       251 dvA~~v~~L~s~~a~~itG~~i~vd  275 (281)
T 3v2h_A          251 QVASLALYLAGDDAAQITGTHVSMD  275 (281)
T ss_dssp             HHHHHHHHHHSSGGGGCCSCEEEES
T ss_pred             HHHHHHHHHcCCCcCCCCCcEEEEC
Confidence            9999999999999999999999987

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.4e-51  Score=335.50  Aligned_cols=239  Identities=28%  Similarity=0.346  Sum_probs=214.8

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .+++++|+++||||++|||++++++|+++|++|++++++ .+.+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999998665 4667788888887788899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-Cc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TW  164 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-~~  164 (259)
                      .+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++.          |+||++||..+..+ .+
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~----------g~iv~isS~~~~~~~~~  175 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG----------GRIITIGSNLAELVPWP  175 (271)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT----------CEEEEECCGGGTCCCST
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC----------CEEEEEeChhhccCCCC
Confidence            99999999999999888888999999999999999999999999999998642          88999999777655 68


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      +...|++||+|+++|+++++.|++ ++|||||+|+||+++|++.....   +..+......|.+|+++|+|+|++++||+
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          176 GISLYSASKAALAGLTKGLARDLG-PRGITVNIVHPGSTDTDMNPADG---DHAEAQRERIATGSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSSSSCSSC---SSHHHHHHTCTTSSCBCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCCCcCCcccccc---hhHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            899999999999999999999998 89999999999999987654322   22344556788999999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      |+.+.|+|||.|.+|
T Consensus       252 s~~~~~itG~~i~vd  266 (271)
T 3v2g_A          252 GPQGKFVTGASLTID  266 (271)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CcccCCccCCEEEeC
Confidence            999999999999988

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-50  Score=330.54  Aligned_cols=243  Identities=26%  Similarity=0.338  Sum_probs=216.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45889999999999999999999999999999999999988888888887767789999999999999999999999999


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 -GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                       |++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..++.+.+..
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~  168 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQN--------GNVIFLSSIAGFSALPSV  168 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--------EEEEEECCGGGTSCCTTC
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcCHhhcCCCCCc
Confidence             99999999999887788889999999999999999999999999999987654        899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC----hHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ..|++||+++++|+++++.|++ ++||+||+|+||+++|++......    .++....+....|.+|+++|+|+|++++|
T Consensus       169 ~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  247 (273)
T 1ae1_A          169 SLYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAF  247 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999998 889999999999999876433222    22334445566788999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.+.|+||+.|.+|
T Consensus       248 l~s~~~~~~tG~~i~vd  264 (273)
T 1ae1_A          248 LCFPAASYITGQIIWAD  264 (273)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCccccCcCCCEEEEC
Confidence            99999999999999987

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=4.9e-51  Score=337.87  Aligned_cols=242  Identities=22%  Similarity=0.255  Sum_probs=218.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+. 
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-  107 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-  107 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            3589999999999999999999999999999999999999999999998887888999999999999999999999887 


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||.....++.+.++++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.+...
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~Iv~isS~~~~~~~~~~~  179 (275)
T 4imr_A          108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKW--------GRVVSIGSINQLRPKSVVT  179 (275)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTBH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEECCHHhCCCCCCch
Confidence            99999999999888888889999999999999999999999999999988764        9999999999999888889


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-hHHHHHHhhhhc-cCCCCCCHHHHHHHHHHhcC
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYM-AAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~s  245 (259)
                      .|++||+|+++|+++++.|++ ++||+||+|+||+++|++...... .++......... |.+|+++|+|+|++++||+|
T Consensus       180 ~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  258 (275)
T 4imr_A          180 AYAATKAAQHNLIQSQARDFA-GDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLAS  258 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999998 889999999999999875432211 123333444444 89999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.++|+|||.|.+|
T Consensus       259 ~~a~~itG~~i~vd  272 (275)
T 4imr_A          259 EACSFMTGETIFLT  272 (275)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             cccCCCCCCEEEeC
Confidence            99999999999998

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-50  Score=335.44  Aligned_cols=244  Identities=25%  Similarity=0.314  Sum_probs=198.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999985 677788888888877888999999999999999999999999


Q ss_pred             cCCccEEEECCCC--CCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           87 FGKLDILVNAAAG--NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        87 ~g~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +|++|+||||||.  ....++.+.+.++|++.+++|+.++++++|+++|.|.+++..     .+|+||++||..+..+.+
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-----~~g~Iv~isS~~~~~~~~  179 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDAR-----ASRSIINITSVSAVMTSP  179 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCC-----CCEEEEEECCC-------
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCC-----CCCEEEEEcchhhccCCC
Confidence            9999999999998  456788899999999999999999999999999999876411     138999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhh-hccCCCCCCHHHHHHHHHHh
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD-YMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l  243 (259)
                      +...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.... .+ +....... ..|.+|+++|+|+|++++||
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~~p~~r~~~pedvA~~v~~L  256 (280)
T 4da9_A          180 ERLDYCMSKAGLAAFSQGLALRLA-ETGIAVFEVRPGIIRSDMTAAV-SG-KYDGLIESGLVPMRRWGEPEDIGNIVAGL  256 (280)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CCBCHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEeecCCcCCchhhc-ch-hHHHHHhhcCCCcCCcCCHHHHHHHHHHH
Confidence            999999999999999999999998 8999999999999998764332 22 22222333 67889999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +|+.+.|+|||.|.+|
T Consensus       257 ~s~~~~~itG~~i~vd  272 (280)
T 4da9_A          257 AGGQFGFATGSVIQAD  272 (280)
T ss_dssp             HTSTTGGGTTCEEEES
T ss_pred             hCccccCCCCCEEEEC
Confidence            9999999999999988

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-50  Score=331.40  Aligned_cols=242  Identities=25%  Similarity=0.399  Sum_probs=218.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999999888888888877677899999999999999999999999999


Q ss_pred             CccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           89 KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        89 ~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+..+.+...
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~  155 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNY--------GRIVNTASMAGVKGPPNMA  155 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHSCCTTBH
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcchhhccCCCCCc
Confidence            999999999987 6677888999999999999999999999999999987654        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC------------CC-hHH-HHHHhhhhccCCCCCCH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------------LA-PEE-IRSKATDYMAAYKFGEK  233 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~  233 (259)
                      .|++||+++++|+++++.|++ ++|||||+|+||+++|++....            .. .++ ..+.+....|.+|+++|
T Consensus       156 ~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  234 (262)
T 1zem_A          156 AYGTSKGAIIALTETAALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI  234 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCG
T ss_pred             hHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCH
Confidence            999999999999999999998 8999999999999998764321            12 122 33445566789999999


Q ss_pred             HHHHHHHHHhcCccCCcccccccccC
Q 024976          234 WDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+|++++||+|+.+.|+||+.|.+|
T Consensus       235 ~dvA~~v~~l~s~~~~~itG~~i~vd  260 (262)
T 1zem_A          235 NEIPGVVAFLLGDDSSFMTGVNLPIA  260 (262)
T ss_dssp             GGSHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHcCchhcCcCCcEEecC
Confidence            99999999999999999999999987

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.5e-50  Score=332.25  Aligned_cols=241  Identities=23%  Similarity=0.327  Sum_probs=203.1

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .++++++|+++||||++|||++++++|+++|++|+++ +++.+..+...+++...+.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            2 SLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999988 666777778888888778889999999999999999999999


Q ss_pred             HHcCCccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-cc
Q 024976           85 NHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TA  162 (259)
Q Consensus        85 ~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~  162 (259)
                      +.+|++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++.          |+||++||..+. .+
T Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~----------g~iv~isS~~~~~~~  151 (259)
T 3edm_A           82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG----------GAIVTFSSQAGRDGG  151 (259)
T ss_dssp             HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEECCHHHHHCC
T ss_pred             HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CEEEEEcCHHhccCC
Confidence            9999999999999987 66788899999999999999999999999999998762          889999999988 77


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      .++...|++||+|+++|+|+++.|++ +. ||||+|+||+++|++... ...++..+.+....|.+|+++|+|+|++++|
T Consensus       152 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~-I~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~p~~r~~~pedva~~v~~  228 (259)
T 3edm_A          152 GPGALAYATSKGAVMTFTRGLAKEVG-PK-IRVNAVCPGMISTTFHDT-FTKPEVRERVAGATSLKREGSSEDVAGLVAF  228 (259)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEEEEEECCBCC-----------------------CCBCHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHC-CC-CEEEEEEECCCcCccccc-ccChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            88899999999999999999999998 65 999999999999765443 3334555666777899999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.+.|+||+.|.+|
T Consensus       229 L~s~~~~~itG~~i~vd  245 (259)
T 3edm_A          229 LASDDAAYVTGACYDIN  245 (259)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HcCccccCccCCEEEEC
Confidence            99999999999999988

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.1e-49  Score=336.17  Aligned_cols=245  Identities=26%  Similarity=0.369  Sum_probs=214.6

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC------------hhhHHHHHHHHHhcCCCeEEEEcCCCCH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVRKR   73 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   73 (259)
                      .+.+++||++|||||++|||+++++.|+++|++|++++|+            .+.+++..+++...+.++.++.+|++|+
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            3456899999999999999999999999999999999876            5667777777777788899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEE
Q 024976           74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN  153 (259)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  153 (259)
                      ++++++++++.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.       +|+||+
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-------~g~Iv~  192 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ-------GGSVIF  192 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS-------CEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-------CCEEEE
Confidence            9999999999999999999999999988888899999999999999999999999999999987642       489999


Q ss_pred             eccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC------------CCChHHHHHH-
Q 024976          154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS------------KLAPEEIRSK-  220 (259)
Q Consensus       154 isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~------------~~~~~~~~~~-  220 (259)
                      +||..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++...            ....++..+. 
T Consensus       193 isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (317)
T 3oec_A          193 VSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVG-RHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELF  271 (317)
T ss_dssp             ECCGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHH
T ss_pred             ECcHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHH
Confidence            99999999999999999999999999999999998 899999999999999875321            1111122221 


Q ss_pred             -hhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          221 -ATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       221 -~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                       .....| +|+++|+|||++++||+|+.+.|+|||.|.+|
T Consensus       272 ~~~~~~p-~~~~~pedvA~av~fL~s~~a~~itG~~i~vd  310 (317)
T 3oec_A          272 SQLTLLP-IPWVEPEDVSNAVAWLASDEARYIHGAAIPVD  310 (317)
T ss_dssp             TTTCSSS-SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hhhccCC-CCCCCHHHHHHHHHHHcCCcccCCCCCEEEEC
Confidence             122334 68899999999999999999999999999998

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=9.9e-50  Score=325.22  Aligned_cols=241  Identities=29%  Similarity=0.292  Sum_probs=222.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+..+.++..
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~  152 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRW--------GRIISIGSVVGSAGNPGQT  152 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTCH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------eEEEEEcchhhccCCCCcH
Confidence            99999999999988888889999999999999999999999999999988764        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+|+++|+++++.|++ ++||+||+|+||++.|++.. .. .++.........|.+|+.+|+|+|++++||+++.
T Consensus       153 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  229 (247)
T 3lyl_A          153 NYCAAKAGVIGFSKSLAYEVA-SRNITVNVVAPGFIATDMTD-KL-TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEE  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTT-TS-CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEeeCcEecccch-hc-cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCC
Confidence            999999999999999999998 88999999999999976543 33 3444555667788999999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.++||+.|.+|
T Consensus       230 ~~~~tG~~i~vd  241 (247)
T 3lyl_A          230 AKYITGQTLHVN  241 (247)
T ss_dssp             GTTCCSCEEEES
T ss_pred             cCCccCCEEEEC
Confidence            999999999987

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=9.9e-51  Score=339.19  Aligned_cols=242  Identities=27%  Similarity=0.315  Sum_probs=217.1

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh--hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .++++||++|||||++|||++++++|+++|++|++++|+.  +..+...+.+...+.++.++.+|++|+++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999873  34566667777778889999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           85 NHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      +.+|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+.          |+||++||..++.+.
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~----------g~Iv~isS~~~~~~~  193 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG----------ASIITTSSIQAYQPS  193 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT----------CEEEEECCGGGTSCC
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC----------CEEEEECChhhccCC
Confidence            99999999999999864 5678889999999999999999999999999988542          889999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +....|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......++....+....|.+|+++|+|+|++++||
T Consensus       194 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L  272 (294)
T 3r3s_A          194 PHLLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYL  272 (294)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999998 889999999999999876443333344455666778999999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +|+.+.|+||+.|.+|
T Consensus       273 ~s~~~~~itG~~i~vd  288 (294)
T 3r3s_A          273 ASQESSYVTAEVHGVC  288 (294)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             hCccccCCCCCEEEEC
Confidence            9999999999999987

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=5e-50  Score=335.26  Aligned_cols=242  Identities=22%  Similarity=0.219  Sum_probs=214.9

Q ss_pred             CCCCCCCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      .++++++|+++||||+|  |||++++++|+++|++|++++|+.+..+...+.....+ .+.++.+|++|+++++++++++
T Consensus        24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~  102 (296)
T 3k31_A           24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKVL  102 (296)
T ss_dssp             CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHHH
T ss_pred             chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHH
Confidence            44668999999999997  99999999999999999999999765555544444433 4789999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           84 INHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      .+.+|++|+||||||+...    .++.+.+.++|++.+++|+.++++++++++|.|.+  .        |+||++||..+
T Consensus       103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~--------g~IV~isS~~~  172 (296)
T 3k31_A          103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--G--------GSILTLSYYGA  172 (296)
T ss_dssp             HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--C--------EEEEEEECGGG
T ss_pred             HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--C--------CEEEEEEehhh
Confidence            9999999999999998754    67888999999999999999999999999999865  2        89999999999


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      ..+.+.+..|++||+|+++|+|+++.|++ ++|||||+|+||+++|++.......++.........|.+|+++|||+|++
T Consensus       173 ~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  251 (296)
T 3k31_A          173 EKVVPHYNVMGVCKAALEASVKYLAVDLG-KQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGA  251 (296)
T ss_dssp             TSCCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred             ccCCCCchhhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            99999999999999999999999999998 89999999999999987654332234455666778899999999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+|+.+.|+|||.|.+|
T Consensus       252 v~fL~s~~a~~itG~~i~vd  271 (296)
T 3k31_A          252 ALYLLSDLGRGTTGETVHVD  271 (296)
T ss_dssp             HHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHcCCccCCccCCEEEEC
Confidence            99999999999999999988

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.4e-49  Score=323.95  Aligned_cols=239  Identities=22%  Similarity=0.307  Sum_probs=213.3

Q ss_pred             CCCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCC--CCHHHHH
Q 024976            1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDV--RKREDAV   77 (259)
Q Consensus         1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl--~~~~~~~   77 (259)
                      |........+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|+  +|+++++
T Consensus         1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (252)
T 3f1l_A            1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQ   80 (252)
T ss_dssp             CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHH
T ss_pred             CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHH
Confidence            56555566799999999999999999999999999999999999999988888888654 34789999999  9999999


Q ss_pred             HHHHHHHHHcCCccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 024976           78 RVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA  156 (259)
Q Consensus        78 ~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS  156 (259)
                      ++++++.+.+|++|+||||||.. ...++.+.++++|++.+++|+.++++++|+++|+|++++.        |+||++||
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--------g~iv~isS  152 (252)
T 3f1l_A           81 QLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDA--------GSLVFTSS  152 (252)
T ss_dssp             HHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSS--------CEEEEECC
T ss_pred             HHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCC--------CEEEEECC
Confidence            99999999999999999999985 4568889999999999999999999999999999988764        89999999


Q ss_pred             ccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHH
Q 024976          157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI  236 (259)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  236 (259)
                      ..+..+.++...|++||+|+++|+++++.|++ +. ||||+|+||+++|++....          ....+..++.+|+|+
T Consensus       153 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~-irvn~v~PG~v~t~~~~~~----------~~~~~~~~~~~p~dv  220 (252)
T 3f1l_A          153 SVGRQGRANWGAYAASKFATEGMMQVLADEYQ-QR-LRVNCINPGGTRTAMRASA----------FPTEDPQKLKTPADI  220 (252)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEEEECCSBSSHHHHHH----------CTTCCGGGSBCTGGG
T ss_pred             hhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-CC-cEEEEEecCcccCchhhhh----------CCccchhccCCHHHH
Confidence            99999999999999999999999999999997 66 9999999999997543211          111223467899999


Q ss_pred             HHHHHHhcCccCCcccccccccC
Q 024976          237 AMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       237 a~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++++||+|+.+.|+||+.|.+|
T Consensus       221 a~~~~~L~s~~~~~itG~~i~vd  243 (252)
T 3f1l_A          221 MPLYLWLMGDDSRRKTGMTFDAQ  243 (252)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEESS
T ss_pred             HHHHHHHcCccccCCCCCEEEeC
Confidence            99999999999999999999988

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.6e-49  Score=326.42  Aligned_cols=243  Identities=30%  Similarity=0.403  Sum_probs=217.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999988888888887667789999999999999999999999999


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 -GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                       +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.++.
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~  156 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASER--------GNVVFISSVSGALAVPYE  156 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSS--------EEEEEECCGGGTSCCTTC
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcchhhccCCCCc
Confidence             89999999999877778888999999999999999999999999999987654        899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHH---HhhhhccCCCCCCHHHHHHHHHHh
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS---KATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ..|++||++++.|+++++.|++ ++||+||+|+||+++|++.......+...+   .+....|.+|+++|+|+|++++||
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l  235 (260)
T 2ae2_A          157 AVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFL  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999998 889999999999999775432222222222   445567889999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.++||+.|.+|
T Consensus       236 ~s~~~~~~tG~~~~vd  251 (260)
T 2ae2_A          236 CFPAASYVTGQIIYVD  251 (260)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             cCccccCCCCCEEEEC
Confidence            9999999999999887

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-49  Score=327.94  Aligned_cols=245  Identities=27%  Similarity=0.385  Sum_probs=215.6

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +..++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++
T Consensus         7 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   86 (267)
T 1iy8_A            7 PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT   86 (267)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999998888888877654  567999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           84 INHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      .+.+|++|+||||||.... .++.+.+.++|++.+++|+.+++.++++++|.|++++.        |+||++||..+..+
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~  158 (267)
T 1iy8_A           87 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGS--------GMVVNTASVGGIRG  158 (267)
T ss_dssp             HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSB
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEEcchhhccC
Confidence            9999999999999998765 67888999999999999999999999999999987654        89999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC--C-Ch---HHHHHHhhhhccCCCCCCHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--L-AP---EEIRSKATDYMAAYKFGEKWDI  236 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~--~-~~---~~~~~~~~~~~~~~~~~~~~dv  236 (259)
                      .++...|++||+++++|+++++.|++ ++||+||+|+||+++|++....  . .+   +...+.+....|.+|+++|+|+
T Consensus       159 ~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv  237 (267)
T 1iy8_A          159 IGNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEI  237 (267)
T ss_dssp             CSSBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHH
Confidence            99999999999999999999999998 8899999999999998753321  0 11   1111244456788999999999


Q ss_pred             HHHHHHhcCccCCcccccccccC
Q 024976          237 AMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       237 a~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |++++||+++.+.|+||+.|.+|
T Consensus       238 A~~v~~l~s~~~~~~tG~~i~vd  260 (267)
T 1iy8_A          238 AAVVAFLLSDDASYVNATVVPID  260 (267)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHcCccccCCCCCEEEEC
Confidence            99999999999999999999987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-49  Score=328.14  Aligned_cols=245  Identities=32%  Similarity=0.454  Sum_probs=217.3

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH-HhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +..++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ ...+.++.++.+|++|+++++++++++.
T Consensus        15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (267)
T 1vl8_A           15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   94 (267)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            335689999999999999999999999999999999999988888887777 4446678999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc-ccccC
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTAT  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~-~~~~~  163 (259)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||.. +..+.
T Consensus        95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~  166 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDN--------PSIINIGSLTVEEVTM  166 (267)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSS--------CEEEEECCGGGTCCCS
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------cEEEEECCcchhccCC
Confidence            99999999999999887778888999999999999999999999999999987654        8999999998 88888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +....|++||+++++|+++++.|++ ++||+||+|+||+++|++.......++....+....|.+|+.+|+|+|++++||
T Consensus       167 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l  245 (267)
T 1vl8_A          167 PNISAYAASKGGVASLTKALAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFL  245 (267)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHH
Confidence            8899999999999999999999998 889999999999999876432211123334445567889999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.++||+.|.+|
T Consensus       246 ~s~~~~~itG~~i~vd  261 (267)
T 1vl8_A          246 ASEEAKYVTGQIIFVD  261 (267)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             cCccccCCcCCeEEEC
Confidence            9999999999999987

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.6e-49  Score=331.69  Aligned_cols=241  Identities=22%  Similarity=0.184  Sum_probs=210.2

Q ss_pred             CCCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +.++++|+++||||+  +|||++++++|+++|++|++++|+.+..+.. +++.....++.++.+|++|+++++++++++.
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHH-HHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            456899999999999  5599999999999999999999996543333 3333333368899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           85 NHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +.+|++|+||||||+..    ..++.+.++++|++.+++|+.++++++++++|+|++.          |+||++||..+.
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~----------g~Iv~isS~~~~  174 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG----------GSILTLTYYGAE  174 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC----------EEEEEEECGGGT
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC----------CEEEEEeehhhc
Confidence            99999999999999875    5778889999999999999999999999999999752          899999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+.+.+..|++||+|+++|+|+++.|++ ++|||||+|+||+++|++.......++..+......|.+|+++|+|+|+++
T Consensus       175 ~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  253 (293)
T 3grk_A          175 KVMPNYNVMGVAKAALEASVKYLAVDLG-PQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVG  253 (293)
T ss_dssp             SBCTTTTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHh-HhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999998 899999999999999876554444456666777888999999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.+.|+||+.|.+|
T Consensus       254 ~~L~s~~~~~itG~~i~vd  272 (293)
T 3grk_A          254 LYFLSDLSRSVTGEVHHAD  272 (293)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHcCccccCCcceEEEEC
Confidence            9999999999999999987

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.9e-49  Score=323.45  Aligned_cols=240  Identities=33%  Similarity=0.427  Sum_probs=216.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            367999999999999999999999999999999999 7777888888887767789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.+...
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~  152 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRH--------GRIVNIASVVGVTGNPGQA  152 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTBH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECCHHhcCCCCCCc
Confidence            99999999999877778888999999999999999999999999999987654        8999999999988888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+++++|+++++.|++ ++||+||+|+||+++|++... .. ++....+....|.+|+.+|+|+|++++||+++.
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  229 (246)
T 2uvd_A          153 NYVAAKAGVIGLTKTSAKELA-SRNITVNAIAPGFIATDMTDV-LD-ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQ  229 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBGGGCSSC-CC-TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeccccCcchhh-cC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999999999999998 889999999999999775432 22 223334455678889999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.|+||+.|.+|
T Consensus       230 ~~~~tG~~~~vd  241 (246)
T 2uvd_A          230 SKYITGQTLNVD  241 (246)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hcCCCCCEEEEC
Confidence            999999999887

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=7.5e-51  Score=334.62  Aligned_cols=241  Identities=21%  Similarity=0.264  Sum_probs=205.1

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC---hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      .++++++|+++||||++|||++++++|+++|++|++++|.   .+.++++.+++...+.++.++.+|++|++++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            3467899999999999999999999999999999998764   4567777788877778899999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+          .|+||++||..+..+
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~----------~g~iv~isS~~~~~~  154 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP----------NGHIITIATSLLAAY  154 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE----------EEEEEEECCCHHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC----------CCEEEEEechhhccC
Confidence            9999999999999999988888889999999999999999999999999999843          289999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      .+....|++||+|+++|+++++.|++ ++|||||+|+||+++|++.... ..++.........|.+|+.+|||+|++++|
T Consensus       155 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~r~~~pedvA~~v~~  232 (262)
T 3ksu_A          155 TGFYSTYAGNKAPVEHYTRAASKELM-KQQISVNAIAPGPMDTSFFYGQ-ETKESTAFHKSQAMGNQLTKIEDIAPIIKF  232 (262)
T ss_dssp             HCCCCC-----CHHHHHHHHHHHHTT-TTTCEEEEEEECCCCTHHHHTC-C------------CCCCSCCGGGTHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCCCcCcccccc-CchHHHHHHHhcCcccCCCCHHHHHHHHHH
Confidence            88999999999999999999999998 8999999999999997664432 333444556667889999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+ +.|+|||.|.+|
T Consensus       233 L~s~-~~~itG~~i~vd  248 (262)
T 3ksu_A          233 LTTD-GWWINGQTIFAN  248 (262)
T ss_dssp             HHTT-TTTCCSCEEEES
T ss_pred             HcCC-CCCccCCEEEEC
Confidence            9999 999999999988

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=3.4e-49  Score=329.51  Aligned_cols=246  Identities=20%  Similarity=0.241  Sum_probs=214.7

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe-CChhhHHHHHHHHH-hcCCCeEEEEcCCCCHH----------
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALH-SLGIPAIGLEGDVRKRE----------   74 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~----------   74 (259)
                      ++++++|+++||||++|||++++++|+++|++|++++ |+.+.+++..+++. ..+.++.++.+|++|++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            3568899999999999999999999999999999999 99888888888886 55678999999999999          


Q ss_pred             -------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCC--------------HHHHHHHHhccchhHHHHHHHHHH
Q 024976           75 -------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--------------PNGFRTVIEIDSVGTFIMCHEALK  133 (259)
Q Consensus        75 -------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~  133 (259)
                             +++++++++.+.+|++|+||||||.....++.+.+              .++|++.+++|+.++++++++++|
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  163 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  163 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                   99999999999999999999999988777888888              999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC
Q 024976          134 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA  213 (259)
Q Consensus       134 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~  213 (259)
                      .|.+++...  ....|+||++||..+..+.++...|++||+++++|+++++.|++ ++||+||+|+||+++|++  . ..
T Consensus       164 ~m~~~~~~~--~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~--~-~~  237 (291)
T 1e7w_A          164 RVAGTPAKH--RGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD--D-MP  237 (291)
T ss_dssp             HHHTSCGGG--SCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGG--G-SC
T ss_pred             HHHhcCCCC--CCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeCCccCCc--c-CC
Confidence            998764100  00028999999999999999999999999999999999999998 899999999999999876  3 33


Q ss_pred             hHHHHHHhhhhccCC-CCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          214 PEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       214 ~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                       ++..+.+....|.+ |+.+|+|+|++++||+|+.+.|+||+.|.+|
T Consensus       238 -~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vd  283 (291)
T 1e7w_A          238 -PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD  283 (291)
T ss_dssp             -HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             -HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEEC
Confidence             44444555667888 9999999999999999999999999999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.3e-49  Score=328.54  Aligned_cols=240  Identities=26%  Similarity=0.329  Sum_probs=208.6

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC------------hhhHHHHHHHHHhcCCCeEEEEcCCCCHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVRKRE   74 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   74 (259)
                      ..+++||++|||||++|||++++++|+++|++|++++|+            .+.++...+++...+.++.++.+|++|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            456899999999999999999999999999999999987            66677777777777788999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 024976           75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI  154 (259)
Q Consensus        75 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i  154 (259)
                      +++++++++.+.+|++|+||||||+.....    +.++|++.+++|+.++++++++++|+|.+++.       +|+||++
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~i  156 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT-------GGSIVLI  156 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-------CEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CcEEEEE
Confidence            999999999999999999999999765433    58999999999999999999999999987642       3899999


Q ss_pred             ccccccccC----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHH---------Hh
Q 024976          155 SATLHYTAT----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS---------KA  221 (259)
Q Consensus       155 sS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~---------~~  221 (259)
                      ||..+..+.    ++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......+....         ..
T Consensus       157 sS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  235 (278)
T 3sx2_A          157 SSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLA-GQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAM  235 (278)
T ss_dssp             CCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTT
T ss_pred             ccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHh-ccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhh
Confidence            999998877    7788999999999999999999998 899999999999999876543322221111         12


Q ss_pred             hhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          222 TDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       222 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ....| +|+.+|+|+|++++||+|+.+.|+|||.|.+|
T Consensus       236 ~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vd  272 (278)
T 3sx2_A          236 GNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVD  272 (278)
T ss_dssp             SCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeEC
Confidence            23345 68899999999999999999999999999988

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=6.5e-49  Score=323.80  Aligned_cols=244  Identities=25%  Similarity=0.335  Sum_probs=213.1

Q ss_pred             CCCCCCcEEEEeCCc-cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~-~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ++++++|+++||||+ +|||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|++|+++++++++++.
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            456899999999998 59999999999999999999999999999988888655 3679999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.       +++||++||..+..+.+
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~  169 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH-------GGVIVNNASVLGWRAQH  169 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC-------CEEEEEECCGGGTCCCT
T ss_pred             HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CeEEEEeCCHHHcCCCC
Confidence            99999999999999888888889999999999999999999999999999987632       48999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      +...|++||+|+++|+++++.|++ ++||+||+|+||+++|++... ...++..+.+....|.+|+.+|+|+|++++||+
T Consensus       170 ~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~  247 (266)
T 3o38_A          170 SQSHYAAAKAGVMALTRCSAIEAV-EFGVRINAVSPSIARHKFLEK-TSSSELLDRLASDEAFGRAAEPWEVAATIAFLA  247 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeCCcccchhhhc-cCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999998 899999999999999765443 334455556667788999999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.++|||.|.+|
T Consensus       248 s~~~~~~tG~~i~vd  262 (266)
T 3o38_A          248 SDYSSYMTGEVVSVS  262 (266)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CccccCccCCEEEEc
Confidence            999999999999987

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-49  Score=328.65  Aligned_cols=239  Identities=24%  Similarity=0.251  Sum_probs=210.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +..+.++.+|++++++++++++    
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----
Confidence            5689999999999999999999999999999999999999998888888755  3567889999999999887764    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|.|++++.        |+||++||..++.+.+.
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  153 (267)
T 3t4x_A           82 KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKE--------GRVIFIASEAAIMPSQE  153 (267)
T ss_dssp             HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTE--------EEEEEECCGGGTSCCTT
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------CEEEEEcchhhccCCCc
Confidence            5789999999999988888889999999999999999999999999999988764        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC---------CCChHHHHHHh----hhhccCCCCCC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAPEEIRSKA----TDYMAAYKFGE  232 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~  232 (259)
                      ...|++||+|+++|+|+++.|++ ++|||||+|+||+++|++...         ....++..+..    ....|.+|+++
T Consensus       154 ~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  232 (267)
T 3t4x_A          154 MAHYSATKTMQLSLSRSLAELTT-GTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIR  232 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccC
Confidence            99999999999999999999998 999999999999999864321         11222222222    23356799999


Q ss_pred             HHHHHHHHHHhcCccCCcccccccccC
Q 024976          233 KWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |||+|++++||+|+.+.|+|||.|.+|
T Consensus       233 pedvA~~v~fL~s~~~~~itG~~i~vd  259 (267)
T 3t4x_A          233 PEEIAHLVTFLSSPLSSAINGSALRID  259 (267)
T ss_dssp             THHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHHcCccccCccCCeEEEC
Confidence            999999999999999999999999988

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=3.4e-49  Score=324.44  Aligned_cols=241  Identities=29%  Similarity=0.374  Sum_probs=210.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-HHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++|+++||||++|||++++++|+++|++|++++|+.+. +++..+++... +.++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999999999999887 77777777654 6678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.++..
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~  153 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGF--------GRIINIASAHGLVASANKS  153 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTCH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CEEEEECcHHhCcCCCCCc
Confidence            99999999999877778888999999999999999999999999999987654        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC---------hHHHHHHh-hhhccCCCCCCHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKA-TDYMAAYKFGEKWDIA  237 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~dva  237 (259)
                      .|++||+++++|+++++.|++ ++||+||+|+||+++|++......         .++..+.+ ....|.+|+++|+|+|
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva  232 (260)
T 1x1t_A          154 AYVAAKHGVVGFTKVTALETA-GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhc-cCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHH
Confidence            999999999999999999998 899999999999999876433211         01222233 4556889999999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++||+++.+.++||+.|.+|
T Consensus       233 ~~~~~l~s~~~~~~tG~~~~vd  254 (260)
T 1x1t_A          233 GTAVFLASDAAAQITGTTVSVD  254 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHhChhhcCCCCCEEEEC
Confidence            9999999999999999999987

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=4.4e-49  Score=323.80  Aligned_cols=245  Identities=26%  Similarity=0.328  Sum_probs=218.0

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ....+++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+
T Consensus         8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A            8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999888888888877677899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           86 HFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        86 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      .+|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..++.+.+
T Consensus        88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~  159 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGG--------GSVLIVSSVGAYHPFP  159 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTSCCT
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEEechhhcCCCC
Confidence            9999999999999764 467778899999999999999999999999999987654        8999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      +...|++||++++.|+++++.|++ ++|||||+|+||+++|++.......++....+....|.+|+++|+|+|++++||+
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~  238 (260)
T 2zat_A          160 NLGPYNVSKTALLGLTKNLAVELA-PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLC  238 (260)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHT
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999998 8899999999999998754322222333334455678899999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.|+||+.|.+|
T Consensus       239 s~~~~~~tG~~~~vd  253 (260)
T 2zat_A          239 SEDASYITGETVVVG  253 (260)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CcccCCccCCEEEEC
Confidence            999999999999887

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=5e-49  Score=323.57  Aligned_cols=244  Identities=30%  Similarity=0.378  Sum_probs=204.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            5689999999999999999999999999999999999998888877765   4579999999999999999999999999


Q ss_pred             CCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      |++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+++..    ...++||++||..+..+.+..
T Consensus        82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~----~~~~~iv~isS~~~~~~~~~~  157 (261)
T 3n74_A           82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAK----GQECVILNVASTGAGRPRPNL  157 (261)
T ss_dssp             SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTTTTSCCTTC
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC----CCCeEEEEeCchhhcCCCCCc
Confidence            99999999999865 5677788999999999999999999999999999875310    012789999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ..|++||+|+++|+++++.|++ ++||+||+|+||+++|++......  .++..+.+.+..|.+|+.+|+|+|++++||+
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  236 (261)
T 3n74_A          158 AWYNATKGWVVSVTKALAIELA-PAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLC  236 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999998 889999999999999876544322  3444556677889999999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      |+.+.++|||.|.+|
T Consensus       237 s~~~~~itG~~i~vd  251 (261)
T 3n74_A          237 SPQASMITGVALDVD  251 (261)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CCcccCcCCcEEEec
Confidence            999999999999987

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=4.9e-49  Score=322.77  Aligned_cols=244  Identities=22%  Similarity=0.285  Sum_probs=218.2

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe-CChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      .+....++|+++||||++|||++++++|+++|++|++++ |+.+..++..+++...+.++.++.+|++|+++++++++++
T Consensus         6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A            6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             -------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence            344668999999999999999999999999999999887 6667777788888777888999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.
T Consensus        86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~  157 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGW--------GRIINISSVNGQKGQ  157 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCCCGGGSC
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEcchhhccCC
Confidence            999999999999999988888899999999999999999999999999999998765        999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++... . .++..+.+....|.+|+.+|+|+|++++||
T Consensus       158 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  234 (256)
T 3ezl_A          158 FGQTNYSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYIGTDMVKA-I-RPDVLEKIVATIPVRRLGSPDEIGSIVAWL  234 (256)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-S-CHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHH-HhCCEEEEEEECcccCccccc-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999998 889999999999999765433 3 344556667778999999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +|+.+.++||+.|.+|
T Consensus       235 ~s~~~~~~tG~~i~vd  250 (256)
T 3ezl_A          235 ASEESGFSTGADFSLN  250 (256)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             hCCcccCCcCcEEEEC
Confidence            9999999999999987

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4.5e-49  Score=325.27  Aligned_cols=243  Identities=23%  Similarity=0.302  Sum_probs=214.5

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe-CChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..++++|+++||||++|||++++++|+++|++|++++ ++.+..+...+++...+.++.++.+|++|+++++++++++.+
T Consensus        20 ~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998 556666667777777778899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+..+.++
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  171 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRF--------GRIVNIGSVNGSRGAFG  171 (269)
T ss_dssp             HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTT
T ss_pred             HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEeCChhhccCCCC
Confidence            9999999999999988888889999999999999999999999999999988764        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++... ..++.....+....|.+|+.+|+|+|++++||++
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s  249 (269)
T 3gk3_A          172 QANYASAKAGIHGFTKTLALETA-KRGITVNTVSPGYLATAMVEA-VPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCS  249 (269)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTS
T ss_pred             cchHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCcccchhhhh-hchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhC
Confidence            99999999999999999999998 889999999999999766443 3333333356677889999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++|||.|.+|
T Consensus       250 ~~~~~itG~~i~vd  263 (269)
T 3gk3_A          250 DDAGFVTGADLAIN  263 (269)
T ss_dssp             TTCTTCCSCEEEES
T ss_pred             CCcCCeeCcEEEEC
Confidence            99999999999987

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=7.6e-49  Score=322.91  Aligned_cols=243  Identities=26%  Similarity=0.309  Sum_probs=216.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988888887777654 667999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.        |+||++||..++.+.+..
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~  154 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGG--------GAIIHNASICAVQPLWYE  154 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECchhhcCCCCCc
Confidence            999999999999887788889999999999999999999999999999987654        899999999999998899


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC---------hHHHHHHhhhh-ccCCCCCCHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDY-MAAYKFGEKWDI  236 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~dv  236 (259)
                      ..|++||++++.|+++++.|++ ++||+||+|+||+++|++......         .++....+... .|.+|+.+|+|+
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  233 (263)
T 3ai3_A          155 PIYNVTKAALMMFSKTLATEVI-KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEEL  233 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHH
Confidence            9999999999999999999998 889999999999999875322110         12222334444 788999999999


Q ss_pred             HHHHHHhcCccCCcccccccccC
Q 024976          237 AMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       237 a~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |++++||+++.+.++||+.|.+|
T Consensus       234 A~~~~~l~s~~~~~~~G~~~~vd  256 (263)
T 3ai3_A          234 ANFFVFLCSERATYSVGSAYFVD  256 (263)
T ss_dssp             HHHHHHHTSTTCTTCCSCEEEES
T ss_pred             HHHHHHHcCccccCCCCcEEEEC
Confidence            99999999999999999999887

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=4.4e-49  Score=323.43  Aligned_cols=240  Identities=22%  Similarity=0.226  Sum_probs=214.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh--HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +|+++||||++|||++++++|+++|++|++++|+.+.  +++..+++...+.++.++.+|++|+++++++++++.+.+|+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999999999887  77777888766778999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.       +|+||++||..+..+.+....|
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  154 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGV-------KGKIINAASIAAIQGFPILSAY  154 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CCEEEEECCGGGTSCCTTCHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC-------CcEEEEECcchhccCCCCchhH
Confidence            999999999877778888999999999999999999999999999987642       2789999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC-------Ch--HHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-------AP--EEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      ++||+++++|+++++.|++ ++||+||+|+||+++|++.....       .+  ++..+.+....|.+|+++|+|+|+++
T Consensus       155 ~~sK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  233 (258)
T 3a28_C          155 STTKFAVRGLTQAAAQELA-PKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLV  233 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-hhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            9999999999999999998 88999999999999987543211       01  22333444557889999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.+.|+||+.|.+|
T Consensus       234 ~~l~s~~~~~~tG~~i~vd  252 (258)
T 3a28_C          234 SFLASENSNYVTGQVMLVD  252 (258)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCcccCCCCCCEEEEC
Confidence            9999999999999999987

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-49  Score=324.92  Aligned_cols=242  Identities=21%  Similarity=0.282  Sum_probs=196.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF   79 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999999999999988877776665   4568999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCC----CCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           88 GKLDILVNAAAGNFLVPAE----DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      |++|+||||||.....++.    +.+.++|++.+++|+.++++++|+++|.|+++....  ....|+||++||..+..+.
T Consensus        80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~--~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDA--DGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCT--TSCCEEEEEECCTHHHHCC
T ss_pred             CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccC--CCCCeEEEEEechhhccCC
Confidence            9999999999987655443    678899999999999999999999999998752110  0124899999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccC-CCCCCHHHHHHHHHH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALY  242 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  242 (259)
                      ++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++... . +++..+.+....|. +|+++|+|+|++++|
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~-~-~~~~~~~~~~~~p~~~r~~~~~dva~~v~~  234 (257)
T 3tpc_A          158 IGQAAYAASKGGVAALTLPAARELA-RFGIRVVTIAPGIFDTPMMAG-M-PQDVQDALAASVPFPPRLGRAEEYAALVKH  234 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEeCCCCChhhcc-C-CHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999998 899999999999999876533 2 23344555667787 899999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++  .|+|||.|.+|
T Consensus       235 l~s~--~~itG~~i~vd  249 (257)
T 3tpc_A          235 ICEN--TMLNGEVIRLD  249 (257)
T ss_dssp             HHHC--TTCCSCEEEES
T ss_pred             Hccc--CCcCCcEEEEC
Confidence            9976  79999999987

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=8.6e-49  Score=323.95  Aligned_cols=242  Identities=26%  Similarity=0.321  Sum_probs=214.9

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .+++++|+++||||++|||++++++|+++|++|++++|+ .+..+...+++...+.++.++.+|++|+++++++++++.+
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999994 5556667777777788899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.        |+||++||..+..+.++
T Consensus       104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  175 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRF--------GSVVNVASIIGERGNMG  175 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTT
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCC--------CEEEEEechhhcCCCCC
Confidence            9999999999999988888888999999999999999999999999999988764        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|++.|+++++.|++ ..||+||+|+||+++|++... . +++....+....|.+|+.+|+|+|++++||++
T Consensus       176 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~-~-~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s  252 (271)
T 4iin_A          176 QTNYSASKGGMIAMSKSFAYEGA-LRNIRFNSVTPGFIETDMNAN-L-KDELKADYVKNIPLNRLGSAKEVAEAVAFLLS  252 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred             chHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeCcccCCchhh-h-cHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999998 889999999999999775433 2 23444556677889999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       253 ~~~~~itG~~i~vd  266 (271)
T 4iin_A          253 DHSSYITGETLKVN  266 (271)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             CCcCCCcCCEEEeC
Confidence            99999999999987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.3e-49  Score=324.73  Aligned_cols=246  Identities=25%  Similarity=0.302  Sum_probs=215.5

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.+|++|+++++++++++.+
T Consensus        23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~  101 (276)
T 2b4q_A           23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGE  101 (276)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999999988888888876545 788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++...    ..|+||++||..+..+.+.
T Consensus       102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~----~~g~iV~isS~~~~~~~~~  177 (276)
T 2b4q_A          102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAE----NPARVINIGSVAGISAMGE  177 (276)
T ss_dssp             HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSS----SCEEEEEECCGGGTCCCCC
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCC----CCCEEEEECCHHHcCCCCC
Confidence            999999999999988778888899999999999999999999999999998754210    1289999999999988888


Q ss_pred             ch-hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhh--hccCCCCCCHHHHHHHHHH
Q 024976          166 QI-HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD--YMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       166 ~~-~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~  242 (259)
                      .. .|++||++++.|+++++.|++ ++||+||+|+||+++|++.....  ......+..  ..|.+|+++|+|+|++++|
T Consensus       178 ~~~~Y~asK~a~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  254 (276)
T 2b4q_A          178 QAYAYGPSKAALHQLSRMLAKELV-GEHINVNVIAPGRFPSRMTRHIA--NDPQALEADSASIPMGRWGRPEEMAALAIS  254 (276)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSTTTHHHH--HCHHHHHHHHHTSTTSSCCCHHHHHHHHHH
T ss_pred             CccccHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccCcCcchhhcc--hhHHHHHHhhcCCCCCCcCCHHHHHHHHHH
Confidence            87 999999999999999999998 88999999999999987542211  111223333  5688999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.+.|+||+.|.+|
T Consensus       255 l~s~~~~~~tG~~i~vd  271 (276)
T 2b4q_A          255 LAGTAGAYMTGNVIPID  271 (276)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCccccCCCCCEEEeC
Confidence            99999999999999987

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-49  Score=322.23  Aligned_cols=240  Identities=28%  Similarity=0.335  Sum_probs=214.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+|++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999999888888888877677899999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.       .|+||++||..+..+.+....|++
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~a  154 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAVYSS  154 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CCEEEEECchhhcCCCCCchhHHH
Confidence            9999999877778888999999999999999999999999999987641       289999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---------ChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ||+++++|+++++.|++ ++||+||+|+||+++|++.....         ..++....+....|.+|+++|+|+|++++|
T Consensus       155 sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  233 (256)
T 1geg_A          155 SKFAVRGLTQTAARDLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSY  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-HcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999998 88999999999999976532210         012223344455788999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.+.|+||+.|.+|
T Consensus       234 l~s~~~~~~tG~~i~vd  250 (256)
T 1geg_A          234 LASPDSDYMTGQSLLID  250 (256)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCccccCCCCCEEEeC
Confidence            99999999999999987

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.3e-48  Score=318.99  Aligned_cols=237  Identities=30%  Similarity=0.376  Sum_probs=203.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+. +.+++   ++...+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999999987 65544   444456679999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..++.+.++..
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~  152 (249)
T 2ew8_A           81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGW--------GRIINLTSTTYWLKIEAYT  152 (249)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGGSCCSSCH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------eEEEEEcchhhccCCCCch
Confidence            99999999999877778888999999999999999999999999999987754        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-h-HHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-P-EEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      .|++||++++.|+++++.|++ ++||+||+|+||+++|++...... + ++..+.+.  .|.+|+.+|+|+|++++||++
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s  229 (249)
T 2ew8_A          153 HYISTKAANIGFTRALASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLAS  229 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHTS
T ss_pred             hHHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999998 889999999999999876431221 1 11112222  578899999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       230 ~~~~~~tG~~~~vd  243 (249)
T 2ew8_A          230 DDASFITGQTLAVD  243 (249)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             cccCCCCCcEEEEC
Confidence            99999999999887

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=3.1e-49  Score=329.69  Aligned_cols=240  Identities=30%  Similarity=0.414  Sum_probs=215.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|+++++++++++.+.
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999998764 44555566666778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      +|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++.          |+||++||..++.+.+.
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~----------g~iv~isS~~~~~~~~~  192 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG----------DVIINTASIVAYEGNET  192 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT----------CEEEEECCTHHHHCCTT
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC----------CEEEEEechHhcCCCCC
Confidence            999999999999764 4577888999999999999999999999999998542          78999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++..... .++....+....|.+|+++|+|+|++++||+|
T Consensus       193 ~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s  270 (291)
T 3ijr_A          193 LIDYSATKGAIVAFTRSLSQSLV-QKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNVPMQRPGQPYELAPAYVYLAS  270 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSTHHHHHS-CHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHS
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeCCCcCCcccccC-CHHHHHHHHccCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999998 88999999999999987654333 34445566777899999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.|+|||.|.+|
T Consensus       271 ~~~~~itG~~i~vd  284 (291)
T 3ijr_A          271 SDSSYVTGQMIHVN  284 (291)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             CccCCCcCCEEEEC
Confidence            99999999999987

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-49  Score=329.66  Aligned_cols=242  Identities=29%  Similarity=0.309  Sum_probs=209.2

Q ss_pred             CCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC------------hhhHHHHHHHHHhcCCCeEEEEcCCC
Q 024976            4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVR   71 (259)
Q Consensus         4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~   71 (259)
                      |.+|.+++||++|||||++|||++++++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++
T Consensus         2 p~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   81 (287)
T 3pxx_A            2 PGSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR   81 (287)
T ss_dssp             TTSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT
T ss_pred             CCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC
Confidence            556778999999999999999999999999999999999987            66677777777777888999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceE
Q 024976           72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII  151 (259)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i  151 (259)
                      |+++++++++++.+.+|++|+||||||+....  .+.+.++|++.+++|+.++++++++++|+|.+          +|+|
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~i  149 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLTS----------GASI  149 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT----------TCEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc----------CcEE
Confidence            99999999999999999999999999986554  33788999999999999999999999999833          2889


Q ss_pred             EEeccccccccC-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC--------
Q 024976          152 INISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------  212 (259)
Q Consensus       152 v~isS~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~--------  212 (259)
                      |++||..+..+.           ++...|++||+++++|+++++.|++ ++||+||+|+||+++|++.....        
T Consensus       150 v~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~  228 (287)
T 3pxx_A          150 ITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA-PQSIRANVIHPTNVNTDMLNSAPMYRQFRPD  228 (287)
T ss_dssp             EEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEESSBSSTTTSSHHHHHHHCTT
T ss_pred             EEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCccccccccccchhhhhccc
Confidence            999999887765           6778999999999999999999998 88999999999999987654211        


Q ss_pred             -C---hHHHHH--HhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          213 -A---PEEIRS--KATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       213 -~---~~~~~~--~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                       .   ..+...  ......| +|+++|+|||++++||+|+.++|+|||.|.+|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vd  280 (287)
T 3pxx_A          229 LEAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVD  280 (287)
T ss_dssp             SSSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeEC
Confidence             0   001111  1233344 78999999999999999999999999999988

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.2e-48  Score=324.55  Aligned_cols=237  Identities=24%  Similarity=0.313  Sum_probs=206.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+|
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999999988777665543   56799999999999999999999999999


Q ss_pred             CccEEEECCCCCCC-CCC----CCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           89 KLDILVNAAAGNFL-VPA----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        89 ~id~li~~ag~~~~-~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      ++|+||||||+... .++    .+.+.++|++.+++|+.++++++|+++|+|.+++         |+||++||..+..+.
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---------g~iv~isS~~~~~~~  149 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR---------GSVVFTISNAGFYPN  149 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGTSSS
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC---------CeEEEEecchhccCC
Confidence            99999999997543 222    2445678999999999999999999999998753         899999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--------hHHHHHHhhhhccCCCCCCHHH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--------PEEIRSKATDYMAAYKFGEKWD  235 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~d  235 (259)
                      +....|++||+|+++|+|+++.|++ ++ ||||+|+||+++|++......        ..+..+.+....|.+|+++|+|
T Consensus       150 ~~~~~Y~asKaa~~~l~~~la~e~~-~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  227 (281)
T 3zv4_A          150 GGGPLYTATKHAVVGLVRQMAFELA-PH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEE  227 (281)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHT-TT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGG
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhc-CC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHH
Confidence            9999999999999999999999998 76 999999999999876432211        1123455667789999999999


Q ss_pred             HHHHHHHhcC-ccCCcccccccccC
Q 024976          236 IAMAALYLAS-DAAVHRDLIHLLDD  259 (259)
Q Consensus       236 va~~~~~l~s-~~~~~~tG~~i~~D  259 (259)
                      +|++++||+| +.+.|+|||.|.+|
T Consensus       228 vA~~v~fL~s~~~~~~itG~~i~vd  252 (281)
T 3zv4_A          228 YTGAYVFFATRGDSLPATGALLNYD  252 (281)
T ss_dssp             GSHHHHHHHSTTTSTTCSSCEEEES
T ss_pred             HHHHHHHhhcccccccccCcEEEEC
Confidence            9999999999 88999999999988

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-48  Score=316.50  Aligned_cols=234  Identities=29%  Similarity=0.375  Sum_probs=209.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++   +  +.++.+|++|+++++++++++.+.+|
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLG   76 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999987776655443   2  78899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||.. ..+.++...
T Consensus        77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~-~~~~~~~~~  147 (245)
T 1uls_A           77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNP--------GSIVLTASRV-YLGNLGQAN  147 (245)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--------EEEEEECCGG-GGCCTTCHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEEccch-hcCCCCchh
Confidence            9999999999877778888999999999999999999999999999987654        9999999998 888888999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||+++++|+++++.|++ ++||+||+|+||+++|++.. ... ++....+....|.+|+.+|+|+|++++||+++.+
T Consensus       148 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~-~~~-~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~  224 (245)
T 1uls_A          148 YAASMAGVVGLTRTLALELG-RWGIRVNTLAPGFIETRMTA-KVP-EKVREKAIAATPLGRAGKPLEVAYAALFLLSDES  224 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTS-SSC-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEeCcCcCcchh-hcC-HHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999998 88999999999999987643 332 3334445566788999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .++||+.|.+|
T Consensus       225 ~~~tG~~~~vd  235 (245)
T 1uls_A          225 SFITGQVLFVD  235 (245)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCcCCEEEEC
Confidence            99999999887

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=8.5e-49  Score=326.16  Aligned_cols=233  Identities=22%  Similarity=0.286  Sum_probs=209.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-------hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-------~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+       .+++..+++...+.++.++.+|++|++++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            5589999999999999999999999999999999999876       467777778777788999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +++.+.+|++|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|.|++++.        |+||++||..+.
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~  156 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDN--------PHILTLSPPIRL  156 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSS--------CEEEECCCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECChhhc
Confidence            999999999999999999988888999999999999999999999999999999987664        899999999998


Q ss_pred             ccC-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecc-cccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          161 TAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       161 ~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      .+. +....|++||+|+++|+++++.|++ ++|||||+|+|| .+.|++.         ........|.+|+.+|||+|+
T Consensus       157 ~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~v~PG~~v~t~~~---------~~~~~~~~~~~r~~~pedvA~  226 (285)
T 3sc4_A          157 EPKWLRPTPYMMAKYGMTLCALGIAEELR-DAGIASNTLWPRTTVATAAV---------QNLLGGDEAMARSRKPEVYAD  226 (285)
T ss_dssp             SGGGSCSHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECSSCBCCHHH---------HHHHTSCCCCTTCBCTHHHHH
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeCCCccccHHH---------HhhccccccccCCCCHHHHHH
Confidence            886 7789999999999999999999998 899999999999 5765432         222334457889999999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+|+.+ ++|||.|.+|
T Consensus       227 ~~~~l~s~~~-~~tG~~i~~d  246 (285)
T 3sc4_A          227 AAYVVLNKPS-SYTGNTLLCE  246 (285)
T ss_dssp             HHHHHHTSCT-TCCSCEEEHH
T ss_pred             HHHHHhCCcc-cccceEEEEc
Confidence            9999999988 9999999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=5.6e-49  Score=324.59  Aligned_cols=235  Identities=26%  Similarity=0.340  Sum_probs=208.2

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .+..++++|++|||||++|||++++++|+++|++|++++|+.+..          ...+..+.+|++|+++++++++++.
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTT   76 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999986543          1246789999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..++.+.+
T Consensus        77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~  148 (269)
T 3vtz_A           77 KKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGH--------GSIINIASVQSYAATK  148 (269)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSBCT
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEECchhhccCCC
Confidence            99999999999999988888889999999999999999999999999999988764        9999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC------C---hHHHHHHhhhhccCCCCCCHHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------A---PEEIRSKATDYMAAYKFGEKWD  235 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~d  235 (259)
                      ....|++||+|+++|+++++.|++ + ||+||+|+||+++|++.....      .   .++..+.+....|.+|+++|+|
T Consensus       149 ~~~~Y~asKaa~~~l~~~la~e~~-~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  226 (269)
T 3vtz_A          149 NAAAYVTSKHALLGLTRSVAIDYA-P-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEE  226 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHT-T-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhc-C-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHH
Confidence            999999999999999999999998 7 899999999999987542211      0   1344455667789999999999


Q ss_pred             HHHHHHHhcCccCCcccccccccC
Q 024976          236 IAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       236 va~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|++++||+|+.+.|+||+.|.+|
T Consensus       227 vA~~v~~L~s~~~~~itG~~i~vd  250 (269)
T 3vtz_A          227 VAEVVAFLASDRSSFITGACLTVD  250 (269)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHhCCccCCCcCcEEEEC
Confidence            999999999999999999999987

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.4e-48  Score=323.67  Aligned_cols=244  Identities=27%  Similarity=0.347  Sum_probs=218.0

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      |.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            33588999999999999999999999999999999999998888888888776778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHH--HHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.  |.+++.        |+||++||..+..+.+
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~  168 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGT--------GRIVNIASTGGKQGVV  168 (277)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTE--------EEEEEECCGGGTSCCT
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCC--------eEEEEECccccccCCC
Confidence            999999999999877778888999999999999999999999999999  887654        8999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC---h------HHHHHHhhhhccCCCCCCHHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---P------EEIRSKATDYMAAYKFGEKWD  235 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~d  235 (259)
                      ....|++||++++.|+++++.|++ +.||+||+|+||+++|++......   +      ++....+....|.+|+++|+|
T Consensus       169 ~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~d  247 (277)
T 2rhc_B          169 HAAPYSASKHGVVGFTKALGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE  247 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHT-TTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHH
Confidence            999999999999999999999998 899999999999999765322110   1      223334455678899999999


Q ss_pred             HHHHHHHhcCccCCcccccccccC
Q 024976          236 IAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       236 va~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|++++||+++.+.++||+.|.+|
T Consensus       248 vA~~v~~l~s~~~~~~tG~~~~vd  271 (277)
T 2rhc_B          248 VAEMVAYLIGPGAAAVTAQALNVC  271 (277)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHhCchhcCCCCcEEEEC
Confidence            999999999999999999999887

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=2.1e-48  Score=319.79  Aligned_cols=242  Identities=23%  Similarity=0.286  Sum_probs=211.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999998888887777643  33789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+| +|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..++.+.++
T Consensus        83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  153 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGW--------GRMVYIGSVTLLRPWQD  153 (260)
T ss_dssp             TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTT
T ss_pred             hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEECchhhcCCCCC
Confidence            999 999999999877778888999999999999999999999999999987754        89999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC---------CCChHHHHHHhhhhccCCCCCCHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDI  236 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dv  236 (259)
                      ...|++||+++++|+++++.|++ ++||+||+|+||+++|++...         ...++.....+....|.+|+++|+|+
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv  232 (260)
T 2z1n_A          154 LALSNIMRLPVIGVVRTLALELA-PHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEEL  232 (260)
T ss_dssp             BHHHHHHTHHHHHHHHHHHHHHG-GGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHH
Confidence            99999999999999999999998 889999999999999876541         11111112334455788999999999


Q ss_pred             HHHHHHhcCccCCcccccccccC
Q 024976          237 AMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       237 a~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |++++||+++.+.++||+.|.+|
T Consensus       233 a~~v~~l~s~~~~~~tG~~i~vd  255 (260)
T 2z1n_A          233 ASVVAFLASEKASFITGAVIPVD  255 (260)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHhCccccCCCCCEEEeC
Confidence            99999999999999999999987

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=5.7e-48  Score=318.36  Aligned_cols=241  Identities=26%  Similarity=0.247  Sum_probs=216.6

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEE-EeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +.++.+|+++||||++|||++++++|+++|++|++ ..|+.+.+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999866 56777778888888887788899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHH-hcCCCCCCCCCCceEEEeccccccccCc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLK-KGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      .+|++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.|. +++        +|+||++||..+..+.+
T Consensus       101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~  172 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ--------GGRIITLSSVSGVMGNR  172 (267)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--------CEEEEEECCHHHHHCCT
T ss_pred             HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CcEEEEEcchHhccCCC
Confidence            999999999999998888888899999999999999999999999999887 333        39999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      +...|++||+|+++|+++++.|++ ++||+||+|+||+++|++....   ++.........|.+|+.+|+|+|++++||+
T Consensus       173 ~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L~  248 (267)
T 4iiu_A          173 GQVNYSAAKAGIIGATKALAIELA-KRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYLM  248 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999998 8899999999999998765432   445556667789999999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.++|||.|.+|
T Consensus       249 s~~~~~itG~~i~vd  263 (267)
T 4iiu_A          249 SDIAGYVTRQVISIN  263 (267)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CCcccCccCCEEEeC
Confidence            999999999999987

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=4.7e-48  Score=318.66  Aligned_cols=241  Identities=20%  Similarity=0.172  Sum_probs=216.5

Q ss_pred             CCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC-CeEEEEcCCCCHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +++++|+++||||+  +|||++++++|+++|++|++++|+.+..+...+.....+. ++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            46889999999999  6799999999999999999999987655555555555444 79999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           85 NHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +.+|++|+||||||...    ..++.+.+.++|++.+++|+.+++.++++++|+|++          +|+||++||..+.
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~  152 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE----------GGSIVTLTYLGGE  152 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT----------CEEEEEEECGGGT
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC----------CceEEEEeccccc
Confidence            99999999999999875    467788999999999999999999999999999864          2899999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+.+....|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......++....+....|.+|+.+|+|+|+++
T Consensus       153 ~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v  231 (266)
T 3oig_A          153 LVMPNYNVMGVAKASLDASVKYLAADLG-KENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTA  231 (266)
T ss_dssp             SCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             ccCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999998 899999999999999876655444456667777888999999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+++.+.++||+.|.+|
T Consensus       232 ~~l~s~~~~~~tG~~i~vd  250 (266)
T 3oig_A          232 AFLFSDMSRGITGENLHVD  250 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHcCCchhcCcCCEEEEC
Confidence            9999999999999999987

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-48  Score=324.73  Aligned_cols=243  Identities=23%  Similarity=0.298  Sum_probs=214.6

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC---CeEEEEcCCCCHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+.   ++.++.+|++|+++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            4458899999999999999999999999999999999999888888888876555   7899999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCC--CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           84 INHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      .+.+|++|+||||||.....+  +.+.+.++|++.+++|+.+++.++++++|.|.+++         |+||++||..+..
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---------g~IV~isS~~~~~  171 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK---------GEIVNVSSIVAGP  171 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---------CEEEEECCGGGSS
T ss_pred             HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC---------CEEEEEcCchhcc
Confidence            999999999999999876666  78899999999999999999999999999998753         8899999999988


Q ss_pred             cC-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC-Ch------HHHHHHhhhhccCCCCCCH
Q 024976          162 AT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-AP------EEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       162 ~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~  233 (259)
                      +. ++...|++||+++++|+++++.|++ ++||+||+|+||+++|++..... ..      ++....+....|.+|+++|
T Consensus       172 ~~~~~~~~Y~asKaa~~~l~~~la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  250 (297)
T 1xhl_A          172 QAHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKP  250 (297)
T ss_dssp             SCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCH
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCH
Confidence            87 8889999999999999999999998 88999999999999987643321 11      1222334455688999999


Q ss_pred             HHHHHHHHHhcCcc-CCcccccccccC
Q 024976          234 WDIAMAALYLASDA-AVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~-~~~~tG~~i~~D  259 (259)
                      +|+|++++||+++. +.|+||+.|.+|
T Consensus       251 edvA~~v~~l~s~~~~~~itG~~i~vd  277 (297)
T 1xhl_A          251 EEIANIIVFLADRNLSSYIIGQSIVAD  277 (297)
T ss_dssp             HHHHHHHHHHHCHHHHTTCCSCEEEES
T ss_pred             HHHHHHHHHHhCCcccCCccCcEEEEC
Confidence            99999999999998 999999999887

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=6.4e-49  Score=323.70  Aligned_cols=234  Identities=24%  Similarity=0.309  Sum_probs=208.2

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .++++++|+++||||++|||++++++|+++|++|++++|+.+.++           ....+.+|+++.++++++++++.+
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~~   90 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVAA   90 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHHH
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999865422           124468999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||....+++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.++
T Consensus        91 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~  162 (266)
T 3uxy_A           91 GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGG--------GAIVNVASCWGLRPGPG  162 (266)
T ss_dssp             HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCSBTTBCCTT
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEECCHHhCCCCCC
Confidence            9999999999999988888889999999999999999999999999999998764        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC-----CCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS-----KLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++...     ...+++....+....|.+|+++|+|+|+++
T Consensus       163 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  241 (266)
T 3uxy_A          163 HALYCLTKAALASLTQCMGMDHA-PQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVV  241 (266)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999999999998 889999999999999875432     123344446677788999999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.+.|+||+.|.+|
T Consensus       242 ~~L~s~~~~~itG~~i~vd  260 (266)
T 3uxy_A          242 LFLASDAARYLCGSLVEVN  260 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCchhcCCcCCEEEEC
Confidence            9999999999999999987

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.3e-48  Score=323.28  Aligned_cols=231  Identities=26%  Similarity=0.340  Sum_probs=204.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-------HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------LRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.       +++..+++...+.++.++.+|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            46889999999999999999999999999999999998653       66677777777788999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +++.+.+|++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+.
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~  153 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPN--------PHILTLAPPPSL  153 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSS--------CEEEECCCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCC--------ceEEEECChHhc
Confidence            999999999999999999988888889999999999999999999999999999988764        899999999998


Q ss_pred             cc--CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecc-cccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          161 TA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       161 ~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      .+  .+....|++||+|+++|+|+++.|++ ++|||||+|+|| .+.|++. ...          ...+..++.+|||+|
T Consensus       154 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~~v~T~~~-~~~----------~~~~~~~~~~pedvA  221 (274)
T 3e03_A          154 NPAWWGAHTGYTLAKMGMSLVTLGLAAEFG-PQGVAINALWPRTVIATDAI-NML----------PGVDAAACRRPEIMA  221 (274)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECSBCBCC------------------CCCGGGSBCTHHHH
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCEEEEEEECCcccccchh-hhc----------ccccccccCCHHHHH
Confidence            88  67888999999999999999999998 899999999999 5776543 111          112345578999999


Q ss_pred             HHHHHhcCccCCccccccccc
Q 024976          238 MAALYLASDAAVHRDLIHLLD  258 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~  258 (259)
                      ++++||+|+.+.++|||.|..
T Consensus       222 ~~v~~l~s~~~~~itG~~i~~  242 (274)
T 3e03_A          222 DAAHAVLTREAAGFHGQFLID  242 (274)
T ss_dssp             HHHHHHHTSCCTTCCSCEEEH
T ss_pred             HHHHHHhCccccccCCeEEEc
Confidence            999999999999999999843

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.6e-48  Score=316.88  Aligned_cols=237  Identities=18%  Similarity=0.163  Sum_probs=197.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+. 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            4578999999999999999999999999999999999999999999999887888999999999999999999999999 


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.        |+||++||..+..+.++..
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~  153 (252)
T 3h7a_A           82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQ--------GKIFFTGATASLRGGSGFA  153 (252)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEEEEGGGTCCCTTCH
T ss_pred             CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEECCHHHcCCCCCCc
Confidence            99999999999988888889999999999999999999999999999998764        9999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEE-EEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRV-NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v-~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      .|++||+|+++|+++++.|++ ++|||| |+|+||+++|++.....  ++.........|.+ +.+|+|+|++++||+++
T Consensus       154 ~Y~asKaa~~~l~~~la~e~~-~~gi~v~n~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~  229 (252)
T 3h7a_A          154 AFASAKFGLRAVAQSMARELM-PKNIHVAHLIIDSGVDTAWVRERR--EQMFGKDALANPDL-LMPPAAVAGAYWQLYQQ  229 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC------------------------------CCHHHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCCccCChhhhccc--hhhhhhhhhcCCcc-CCCHHHHHHHHHHHHhC
Confidence            999999999999999999998 899999 99999999987654432  22223344455666 89999999999999998


Q ss_pred             cCCcccccccc
Q 024976          247 AAVHRDLIHLL  257 (259)
Q Consensus       247 ~~~~~tG~~i~  257 (259)
                      ...+++|+-..
T Consensus       230 ~~~~~~~~i~~  240 (252)
T 3h7a_A          230 PKSAWTFEMEI  240 (252)
T ss_dssp             CGGGBCSEEEE
T ss_pred             chhcceeeEEe
Confidence            88888887543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-48  Score=321.45  Aligned_cols=241  Identities=22%  Similarity=0.320  Sum_probs=213.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC---CeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.   ++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888888888876555   789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCC----CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           86 HFGKLDILVNAAAGNFLVP----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      .+|++|+||||||.....+    +.+.+.++|++.+++|+.+++.++++++|.|.+++         |+||++||..+..
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---------g~iv~isS~~~~~  153 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK---------GEIVNVSSIVAGP  153 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGSS
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC---------CcEEEecCccccC
Confidence            9999999999999876666    67889999999999999999999999999998653         7899999999988


Q ss_pred             cC-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC-Ch------HHHHHHhhhhccCCCCCCH
Q 024976          162 AT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-AP------EEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       162 ~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~  233 (259)
                      +. ++...|++||+++++|+++++.|++ ++||+||+|+||+++|++..... ..      ++....+....|.+|+.+|
T Consensus       154 ~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p  232 (280)
T 1xkq_A          154 QAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKP  232 (280)
T ss_dssp             SCCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCH
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCH
Confidence            87 8889999999999999999999998 89999999999999987643321 11      1223334455688999999


Q ss_pred             HHHHHHHHHhcCcc-CCcccccccccC
Q 024976          234 WDIAMAALYLASDA-AVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~-~~~~tG~~i~~D  259 (259)
                      +|+|++++||+++. +.|+||+.|.+|
T Consensus       233 edvA~~v~~l~s~~~~~~~tG~~i~vd  259 (280)
T 1xkq_A          233 EHIANIILFLADRNLSFYILGQSIVAD  259 (280)
T ss_dssp             HHHHHHHHHHHCHHHHTTCCSCEEEES
T ss_pred             HHHHHHHHHhcCcccccCccCCeEEEC
Confidence            99999999999998 999999999887

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-48  Score=325.87  Aligned_cols=244  Identities=20%  Similarity=0.237  Sum_probs=213.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe-CChhhHHHHHHHHH-hcCCCeEEEEcCCCCHH------------
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALH-SLGIPAIGLEGDVRKRE------------   74 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~------------   74 (259)
                      ++++|+++||||++|||++++++|+++|++|++++ |+.+.++++.+++. ..+.++.++.+|++|++            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            48899999999999999999999999999999999 99888888888886 45667999999999999            


Q ss_pred             -----HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCC--------------HHHHHHHHhccchhHHHHHHHHHHHH
Q 024976           75 -----DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--------------PNGFRTVIEIDSVGTFIMCHEALKYL  135 (259)
Q Consensus        75 -----~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~  135 (259)
                           +++++++++.+.+|++|+||||||+....++.+.+              .++|++.+++|+.+++.++++++|.|
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  202 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  202 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 99999999999999999999999987777888888              89999999999999999999999999


Q ss_pred             HhcCCCCCCCCCCceEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH
Q 024976          136 KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE  215 (259)
Q Consensus       136 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~  215 (259)
                      .+++..  .....|+||++||..+..+.++...|++||+++++|+++++.|++ ++||+||+|+||+++|++  ...  +
T Consensus       203 ~~~~~~--~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~--~~~--~  275 (328)
T 2qhx_A          203 AGTPAK--HRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD--DMP--P  275 (328)
T ss_dssp             HHSCGG--GSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCCC--CSC--H
T ss_pred             HhcCCc--CCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCCc--ccc--H
Confidence            876400  000028999999999999999999999999999999999999998 889999999999999876  332  3


Q ss_pred             HHHHHhhhhccCC-CCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          216 EIRSKATDYMAAY-KFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       216 ~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +..+.+....|.+ |+++|+|+|++++||+++.+.++||+.|.+|
T Consensus       276 ~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vd  320 (328)
T 2qhx_A          276 AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD  320 (328)
T ss_dssp             HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence            3344455667888 9999999999999999999999999999987

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=7.2e-48  Score=321.09  Aligned_cols=246  Identities=23%  Similarity=0.280  Sum_probs=209.2

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHH-hcCCCeEEEEcCCCC----HHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALH-SLGIPAIGLEGDVRK----REDAVRVV   80 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~-~~~~~v~~~~~Dl~~----~~~~~~~~   80 (259)
                      .+++++|+++||||++|||++++++|+++|++|++++|+. +.+++..+++. ..+.++.++.+|++|    ++++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            3568899999999999999999999999999999999998 77888888876 556789999999999    99999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCC-----CC-----CCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPA-----ED-----LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI  150 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~  150 (259)
                      +++.+.+|++|+||||||+....++     .+     .+.++|++.+++|+.+++.++++++|.|.+++..  .....|+
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--~~~~~g~  175 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPN--CTSSNLS  175 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC----------CCCEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC--CCCCCeE
Confidence            9999999999999999998766666     56     7889999999999999999999999999765410  0011389


Q ss_pred             EEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCC
Q 024976          151 IINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF  230 (259)
Q Consensus       151 iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  230 (259)
                      ||++||..+..+.+....|++||+|+++|+++++.|++ ++||+||+|+||++.|++ .  ..++ ....+....|.+|+
T Consensus       176 iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~-~--~~~~-~~~~~~~~~p~~r~  250 (288)
T 2x9g_A          176 IVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELA-PYGIRVNGVAPGVSLLPV-A--MGEE-EKDKWRRKVPLGRR  250 (288)
T ss_dssp             EEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSCSCCT-T--SCHH-HHHHHHHTCTTTSS
T ss_pred             EEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhh-ccCeEEEEEEeccccCcc-c--cChH-HHHHHHhhCCCCCC
Confidence            99999999999999999999999999999999999998 889999999999999876 2  2232 23444556788898


Q ss_pred             -CCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          231 -GEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       231 -~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                       .+|+|+|++++||+++.+.|+||+.|.+|
T Consensus       251 ~~~pedvA~~v~~l~s~~~~~itG~~i~vd  280 (288)
T 2x9g_A          251 EASAEQIADAVIFLVSGSAQYITGSIIKVD  280 (288)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CCCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence             99999999999999999999999999987

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=5.3e-48  Score=320.66  Aligned_cols=243  Identities=21%  Similarity=0.182  Sum_probs=215.0

Q ss_pred             CCCCCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      ..|.++++|+++||||+  +|||++++++|+++|++|++++|+.  .++..+++.....++.++.+|++|++++++++++
T Consensus        19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   96 (280)
T 3nrc_A           19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVE   96 (280)
T ss_dssp             ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHH
Confidence            34567899999999988  7899999999999999999999987  3444555554445689999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC----CCCCC-CCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           83 TINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                      +.+.++++|+||||||....    .++.+ .+.++|++.+++|+.++++++++++|.|.++.         |+||++||.
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---------g~iv~isS~  167 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRN---------ASMVALTYI  167 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT---------CEEEEEECG
T ss_pred             HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---------CeEEEEecc
Confidence            99999999999999998654    44555 89999999999999999999999999998652         899999999


Q ss_pred             cccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          158 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      .+..+.+....|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......++.........|.+|+.+|+|+|
T Consensus       168 ~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA  246 (280)
T 3nrc_A          168 GAEKAMPSYNTMGVAKASLEATVRYTALALG-EDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVG  246 (280)
T ss_dssp             GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHH
T ss_pred             ccccCCCCchhhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHH
Confidence            9999999999999999999999999999998 899999999999999877655554566677777888999999999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++||+++.+.++||+.|.+|
T Consensus       247 ~~v~~l~s~~~~~~tG~~i~vd  268 (280)
T 3nrc_A          247 NTVAFLCSDMATGITGEVVHVD  268 (280)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEES
T ss_pred             HHHHHHhCcccCCcCCcEEEEC
Confidence            9999999999999999999987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-48  Score=316.45  Aligned_cols=237  Identities=30%  Similarity=0.388  Sum_probs=208.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+. ++..+++.    + .++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~   75 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL   75 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999876 66655553    4 789999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.+...
T Consensus        76 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~~  147 (256)
T 2d1y_A           76 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGG--------GAIVNVASVQGLFAEQENA  147 (256)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC--------EEEEEECCGGGTSBCTTBH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEccccccCCCCCCh
Confidence            99999999999887778889999999999999999999999999999987654        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC----CChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      .|++||++++.|+++++.|++ ++||+||+|+||+++|++....    ..+++....+....|.+|+.+|+|+|++++||
T Consensus       148 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l  226 (256)
T 2d1y_A          148 AYNASKGGLVNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFL  226 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999998 8899999999999997653221    11122223344556888999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.+++|+.|.+|
T Consensus       227 ~s~~~~~~~G~~~~v~  242 (256)
T 2d1y_A          227 ASEKASFITGAILPVD  242 (256)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             hCchhcCCCCCEEEEC
Confidence            9999999999999887

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.9e-48  Score=318.72  Aligned_cols=239  Identities=28%  Similarity=0.381  Sum_probs=185.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999999999999999998878889999999999999999999999999


Q ss_pred             CCccEEEECCCCC---CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           88 GKLDILVNAAAGN---FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        88 g~id~li~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      |++|+||||||..   ...++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..++   +
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~---~  153 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGG--------GAIVNQSSTAAW---L  153 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------EEEEEECC--------
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------CEEEEECCcccc---C
Confidence            9999999999973   3456778999999999999999999999999999988764        999999999877   4


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ....|++||+|+++|+++++.|++ ++||+||+|+||+++|++... ..+++..+.+.+..|.+|+.+|+|+|++++||+
T Consensus       154 ~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  231 (253)
T 3qiv_A          154 YSNYYGLAKVGINGLTQQLSRELG-GRNIRINAIAPGPIDTEANRT-TTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLL  231 (253)
T ss_dssp             ------CCHHHHHHHHHHHHHHTT-TTTEEEEEEEC--------------------------------CCHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEecCCcccchhh-cCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHc
Confidence            566799999999999999999998 899999999999999775443 334455566677788899999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.++||+.|.+|
T Consensus       232 s~~~~~~tG~~~~vd  246 (253)
T 3qiv_A          232 SDEASWITGQIFNVD  246 (253)
T ss_dssp             SGGGTTCCSCEEEC-
T ss_pred             CccccCCCCCEEEEC
Confidence            999999999999987

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=5.7e-48  Score=316.99  Aligned_cols=233  Identities=19%  Similarity=0.191  Sum_probs=194.2

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..++++++|+++||||++|||++++++|+++|++|++++|+.+.+.+..++.     .+.++.+|++|+++++++++++.
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-----GAVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-----TCEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-----CCeEEECCCCCHHHHHHHHHHHH
Confidence            4456789999999999999999999999999999999999987654433332     27889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.+|++|+||||||...... .+.++++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.+
T Consensus        95 ~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~  165 (260)
T 3gem_A           95 TQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEV--------ADIVHISDDVTRKGSS  165 (260)
T ss_dssp             HHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSS--------CEEEEECCGGGGTCCS
T ss_pred             HhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cEEEEECChhhcCCCC
Confidence            99999999999999876555 56788999999999999999999999999998764        8999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      +...|++||+|+++|+++++.|++ + +|+||+|+||++.|++..    .+..........|.+|+++|+|+|++++||+
T Consensus       166 ~~~~Y~asKaa~~~l~~~la~e~~-~-~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          166 KHIAYCATKAGLESLTLSFAARFA-P-LVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHHH
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHC-C-CCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999998 6 699999999999976532    2334445566788999999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                        .+.|+||+.|.+|
T Consensus       240 --~~~~itG~~i~vd  252 (260)
T 3gem_A          240 --DSTYVTGTTLTVN  252 (260)
T ss_dssp             --HCSSCCSCEEEES
T ss_pred             --hCCCCCCCEEEEC
Confidence              5789999999987

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.3e-49  Score=326.99  Aligned_cols=239  Identities=21%  Similarity=0.202  Sum_probs=211.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC---eEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~---~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      .++++|+++||||++|||++++++|+++|+   +|++++|+.+.++++.+++...  +.++.++.+|++|++++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            347899999999999999999999999998   9999999999999988888754  56789999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           83 TINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      +.+.+|++|+||||||... ..++.+.+.++|++.+++|+.++++++|+++|.|++++.        |+||++||..+..
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~IV~isS~~~~~  180 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNS--------GDIVNLGSIAGRD  180 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTS
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CeEEEECChhhcC
Confidence            9999999999999999865 678889999999999999999999999999999988764        9999999999999


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      +.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++......  ++........    ....+|+|||++
T Consensus       181 ~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~p~~pedvA~~  255 (287)
T 3rku_A          181 AYPTGSIYCASKFAVGAFTDSLRKELI-NTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD----TTPLMADDVADL  255 (287)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTT-TSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT----SCCEEHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc----cCCCCHHHHHHH
Confidence            999999999999999999999999998 899999999999999876432221  2222222222    334489999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+|+.+.+++|+.|.+|
T Consensus       256 v~~l~s~~~~~i~g~~i~v~  275 (287)
T 3rku_A          256 IVYATSRKQNTVIADTLIFP  275 (287)
T ss_dssp             HHHHHTSCTTEEEEEEEEEE
T ss_pred             HHHHhCCCCCeEecceEEee
Confidence            99999999999999999876

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-47  Score=314.41  Aligned_cols=233  Identities=20%  Similarity=0.161  Sum_probs=206.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +|+++||||++|||++++++|+++|  +.|++++|+.+.++++.+++   +.++.++.+|++|+++++++++++.+.+|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999999986  67889999988888777766   457899999999999999999999999999


Q ss_pred             ccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           90 LDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        90 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      +|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++         |+||++||..+..+.++...
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~---------g~iv~isS~~~~~~~~~~~~  149 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN---------GNVVFVSSDACNMYFSSWGA  149 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCSCCCCSSCCSHH
T ss_pred             ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---------CeEEEEcCchhccCCCCcch
Confidence            999999999854 47888999999999999999999999999999998763         89999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-------hHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      |++||+|+++|+++++.|+   .|||||+|+||+++|++......       .++..+.+....|.+|+++|+|+|++++
T Consensus       150 Y~asK~a~~~~~~~la~e~---~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~  226 (254)
T 3kzv_A          150 YGSSKAALNHFAMTLANEE---RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYA  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHC---TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhc---cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHH
Confidence            9999999999999999997   37999999999999876543221       3555667777889999999999999999


Q ss_pred             HhcCcc-CCcccccccccC
Q 024976          242 YLASDA-AVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~-~~~~tG~~i~~D  259 (259)
                      ||+|+. +.|+|||.|.+|
T Consensus       227 ~L~s~~~~~~itG~~i~vd  245 (254)
T 3kzv_A          227 KLALHGIPDGVNGQYLSYN  245 (254)
T ss_dssp             HHHHHCCCGGGTTCEEETT
T ss_pred             HHHhhcccCCCCccEEEec
Confidence            999999 499999999987

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.9e-48  Score=318.08  Aligned_cols=245  Identities=27%  Similarity=0.334  Sum_probs=212.9

Q ss_pred             CCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ...++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.   .++.++.+|++|+++++++++++
T Consensus         4 m~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~   80 (263)
T 3ak4_A            4 MAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKA   80 (263)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHH
Confidence            334566899999999999999999999999999999999999877766655443   26788999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+.+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.       .|+||++||..+..+.
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~  153 (263)
T 3ak4_A           81 IDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNT-------KGVIVNTASLAAKVGA  153 (263)
T ss_dssp             HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCC
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CeEEEEecccccccCC
Confidence            999999999999999877778888999999999999999999999999999987651       2899999999999998


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---------ChHHHHHHhhhhccCCCCCCHH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKW  234 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~  234 (259)
                      +....|++||++++.|+++++.|++ ++||+||+|+||+++|++.....         ..++....+....|.+|+.+|+
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  232 (263)
T 3ak4_A          154 PLLAHYSASKFAVFGWTQALAREMA-PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPE  232 (263)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHh-HcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHH
Confidence            8999999999999999999999998 88999999999999976532211         0123333445567889999999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |+|++++||+++.++++||+.|.+|
T Consensus       233 dvA~~v~~l~s~~~~~~tG~~~~vd  257 (263)
T 3ak4_A          233 DVADVVVFLASDAARFMTGQGINVT  257 (263)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhCccccCCCCCEEEEC
Confidence            9999999999999999999999887

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=4.1e-48  Score=319.17  Aligned_cols=240  Identities=28%  Similarity=0.354  Sum_probs=215.4

Q ss_pred             CCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhH-HHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVL-RSAVAALH-SLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~-~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +++++|+++||||+  +|||++++++|+++|++|++++|+.+.. ++..+++. ..+.++.++.+|++|+++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            46899999999999  9999999999999999999998886654 56666665 33678999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~  167 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGT--------GSLVITASMSGHIAN  167 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSCC
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCC--------ceEEEEccccccccC
Confidence            999999999999999988888889999999999999999999999999999998764        899999999988765


Q ss_pred             --ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       164 --~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                        +....|++||+|+++|+++++.|++ +. |+||+|+||+++|++.. .. +++....+....|.+|+++|+|+|++++
T Consensus       168 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~-i~v~~v~PG~v~t~~~~-~~-~~~~~~~~~~~~~~~r~~~~~dva~~~~  243 (267)
T 3gdg_A          168 FPQEQTSYNVAKAGCIHMARSLANEWR-DF-ARVNSISPGYIDTGLSD-FV-PKETQQLWHSMIPMGRDGLAKELKGAYV  243 (267)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEEEEECCEECSCGG-GS-CHHHHHHHHTTSTTSSCEETHHHHHHHH
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHhc-cC-cEEEEEECCccccchhh-hC-CHHHHHHHHhcCCCCCCcCHHHHHhHhh
Confidence              5788999999999999999999997 66 99999999999976543 32 4455666777889999999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+|+.+.|+||+.|.+|
T Consensus       244 ~l~s~~~~~itG~~i~vd  261 (267)
T 3gdg_A          244 YFASDASTYTTGADLLID  261 (267)
T ss_dssp             HHHSTTCTTCCSCEEEES
T ss_pred             eeecCccccccCCEEEEC
Confidence            999999999999999988

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=8.1e-48  Score=315.41  Aligned_cols=239  Identities=25%  Similarity=0.308  Sum_probs=210.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +++|+++||||++|||++++++|+++|++|++++|+.+  +...+++...+.++.++.+|++|+++++++++++.+.+|+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999999876  4556666655667899999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.+....|
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~Y  151 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNW--------GRIINIASVHGLVGSTGKAAY  151 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTSCCTTBHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEcCchhccCCCCchhH
Confidence            999999999877777888999999999999999999999999999988754        899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-hHHH---H----HHh-hhhccCCCCCCHHHHHHHH
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEI---R----SKA-TDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~---~----~~~-~~~~~~~~~~~~~dva~~~  240 (259)
                      ++||+++++|+++++.|++ ++||+||+|+||+++|++...... .++.   .    ..+ ....|.+|+++|+|+|+++
T Consensus       152 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  230 (255)
T 2q2v_A          152 VAAKHGVVGLTKVVGLETA-TSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence            9999999999999999998 899999999999999865432110 0111   1    223 4556888999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+++.+.++||+.|.+|
T Consensus       231 ~~l~s~~~~~~tG~~~~vd  249 (255)
T 2q2v_A          231 LFLCSEAGSQVRGAAWNVD  249 (255)
T ss_dssp             HHHTSGGGTTCCSCEEEES
T ss_pred             HHHhCCccCCCCCCEEEEC
Confidence            9999999999999999887

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-48  Score=319.17  Aligned_cols=243  Identities=22%  Similarity=0.171  Sum_probs=209.9

Q ss_pred             CCCCCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      .....+++|+++||||+  +|||++++++|+++|++|++++|+....+. .+++.....++.++.+|++|++++++++++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   85 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSELVFPCDVADDAQIDALFAS   85 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHHcCCcEEEECCCCCHHHHHHHHHH
Confidence            44567899999999999  999999999999999999999998654443 444433334588999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC----CCCCC-CCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           83 TINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                      +.+.+|++|+||||||+...    .++.+ .+.++|++.+++|+.++++++++++|.|++.          |+||++||.
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------g~iv~isS~  155 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDD----------ASLLTLSYL  155 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEE----------EEEEEEECG
T ss_pred             HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccC----------ceEEEEecc
Confidence            99999999999999998754    56666 8999999999999999999999999998752          889999999


Q ss_pred             cccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          158 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      .+..+.+....|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......++..+......|.+|+.+|+|+|
T Consensus       156 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva  234 (271)
T 3ek2_A          156 GAERAIPNYNTMGLAKAALEASVRYLAVSLG-AKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVG  234 (271)
T ss_dssp             GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHH
T ss_pred             ccccCCCCccchhHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHH
Confidence            9999999999999999999999999999998 899999999999999876544333455666777788999999999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++||+++.+.++||+.|.+|
T Consensus       235 ~~i~~l~s~~~~~~tG~~i~vd  256 (271)
T 3ek2_A          235 NAGAFLLSDLASGVTAEVMHVD  256 (271)
T ss_dssp             HHHHHHHSGGGTTCCSEEEEES
T ss_pred             HHHHHHcCcccCCeeeeEEEEC
Confidence            9999999999999999999987

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=5.1e-48  Score=316.43  Aligned_cols=241  Identities=30%  Similarity=0.347  Sum_probs=218.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++|+++||||++|||++++++|+++|++|+++ +|+.+.+++..+++...+.++.++.+|+++.++++++++++.+.
T Consensus         3 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            3 SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999885 77777788888888877888999999999999999999999887


Q ss_pred             cC------CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           87 FG------KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        87 ~g------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      ++      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+.          |+||++||..+.
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------~~iv~isS~~~~  152 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN----------SRIINISSAATR  152 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE----------EEEEEECCGGGT
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCC----------CEEEEeCChhhc
Confidence            64      49999999998877888889999999999999999999999999998442          889999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+.+....|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......+..........|.+|+.+|+|+|+++
T Consensus       153 ~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  231 (255)
T 3icc_A          153 ISLPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTA  231 (255)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             cCCCCcchhHHhHHHHHHHHHHHHHHHH-hcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHH
Confidence            9999999999999999999999999998 889999999999999887666555555566677778899999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.+.++||+.|.+|
T Consensus       232 ~~l~s~~~~~~tG~~i~vd  250 (255)
T 3icc_A          232 AFLASPDSRWVTGQLIDVS  250 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCcccCCccCCEEEec
Confidence            9999999999999999987

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=9e-48  Score=314.16  Aligned_cols=231  Identities=21%  Similarity=0.208  Sum_probs=200.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--C-CCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--G-IPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~-~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  + .++.++.+|++|+++++++++++.+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999988888654  3 5789999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||.....++ +.+.++|++.+++|+.+++.++++++|+|++++.        |+||++||..+..+.++
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  154 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKN--------GYIFNVASRAAKYGFAD  154 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECC-------CC
T ss_pred             hcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------eEEEEEccHHhcCCCCC
Confidence            99999999999998877777 7889999999999999999999999999988764        99999999999987777


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+|+++.|++ ++|||||+|+||+++|++..          ......|.+|+.+|+|+|++++||++
T Consensus       155 ~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~----------~~~~~~~~~~~~~p~dva~~v~~l~s  223 (250)
T 3nyw_A          155 GGIYGSTKFALLGLAESLYRELA-PLGIRVTTLCPGWVNTDMAK----------KAGTPFKDEEMIQPDDLLNTIRCLLN  223 (250)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCSHHHH----------HTTCCSCGGGSBCHHHHHHHHHHHHT
T ss_pred             CcchHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCchhh----------hcCCCcccccCCCHHHHHHHHHHHHc
Confidence            89999999999999999999998 89999999999999975432          12233466788999999999999999


Q ss_pred             c-cCCcccccccccC
Q 024976          246 D-AAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~-~~~~~tG~~i~~D  259 (259)
                      + ...+++++.|.+|
T Consensus       224 ~~~~~~~~~~~i~vd  238 (250)
T 3nyw_A          224 LSENVCIKDIVFEMK  238 (250)
T ss_dssp             SCTTEECCEEEEEEH
T ss_pred             CCCceEeeEEEEEee
Confidence            4 5667888888887

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.9e-48  Score=317.83  Aligned_cols=237  Identities=29%  Similarity=0.286  Sum_probs=209.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999999988777666555   44688999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.+++.++|+++|.|++++.        |+||++||..+..+.+....
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~  150 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGG--------GSIVNISSAAGLMGLALTSS  150 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTCHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEECchhhccCCCCchh
Confidence            9999999999877777888999999999999999999999999999987654        89999999999999899999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCC-CHHHHHHHHHHhcCcc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG-EKWDIAMAALYLASDA  247 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~~  247 (259)
                      |++||+++++|+++++.|++ ++||+||+|+||+++|++.... .+ +....+....|.+|+. +|+|+|++++||+++.
T Consensus       151 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~-~~-~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~  227 (254)
T 1hdc_A          151 YGASKWGVRGLSKLAAVELG-TDRIRVNSVHPGMTYTPMTAET-GI-RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHH-TC-CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecccCcCcccccc-ch-hHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCch
Confidence            99999999999999999998 8899999999999997653221 11 1112233445778899 9999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.++||+.|.+|
T Consensus       228 ~~~~tG~~~~vd  239 (254)
T 1hdc_A          228 SSYVTGAELAVD  239 (254)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hcCCCCCEEEEC
Confidence            999999999887

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5e-48  Score=317.91  Aligned_cols=234  Identities=26%  Similarity=0.337  Sum_probs=206.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   ..++.++.+|++|+++++++++++.+.+|
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999988777665554   25688999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.| ++ .        |+||++||..++ +.++...
T Consensus        80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~--------g~iv~isS~~~~-~~~~~~~  148 (263)
T 2a4k_A           80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-G--------GSLVLTGSVAGL-GAFGLAH  148 (263)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-T--------CEEEEECCCTTC-CHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-C--------CEEEEEecchhc-CCCCcHH
Confidence            99999999998877788889999999999999999999999999999 44 3        899999999998 8788899


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||+++++|+++++.|++ ++||+||+|+||+++|++... .. ++....+....|.+|+.+|+|+|++++||+++.+
T Consensus       149 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~~-~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~  225 (263)
T 2a4k_A          149 YAAGKLGVVGLARTLALELA-RKGVRVNVLLPGLIQTPMTAG-LP-PWAWEQEVGASPLGRAGRPEEVAQAALFLLSEES  225 (263)
T ss_dssp             HHHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECSBCCGGGTT-SC-HHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeCcCcCchhhh-cC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999998 899999999999999876433 32 3344445566788999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .++||+.|.+|
T Consensus       226 ~~~tG~~i~vd  236 (263)
T 2a4k_A          226 AYITGQALYVD  236 (263)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCcCCEEEEC
Confidence            99999999887

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.8e-47  Score=316.75  Aligned_cols=243  Identities=22%  Similarity=0.241  Sum_probs=207.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhc-CCCeEEEEcCCCCH----HHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKR----EDAVRVVES   82 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~----~~~~~~~~~   82 (259)
                      .+++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++... +.++.++.+|++|+    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            468999999999999999999999999999999999 888888888888654 66799999999999    999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCH-----------HHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceE
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSP-----------NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII  151 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i  151 (259)
                      +.+.+|++|+||||||.....++.+.+.           ++|++.+++|+.++++++++++|+|. ++.  .....+|+|
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~--~~~~~~g~i  164 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGG--AWRSRNLSV  164 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC----------CCCEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCC--CCCCCCcEE
Confidence            9999999999999999877777888888           99999999999999999999999986 321  000113899


Q ss_pred             EEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCC-C
Q 024976          152 INISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-F  230 (259)
Q Consensus       152 v~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~  230 (259)
                      |++||..++.+.++...|++||+++++|+++++.|++ ++||+||+|+||++.|+   .... ++....+....|.+| +
T Consensus       165 v~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~PG~v~t~---~~~~-~~~~~~~~~~~p~~r~~  239 (276)
T 1mxh_A          165 VNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELA-PRHIRVNAVAPGLSLLP---PAMP-QETQEEYRRKVPLGQSE  239 (276)
T ss_dssp             EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCC---SSSC-HHHHHHHHTTCTTTSCC
T ss_pred             EEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcccCC---ccCC-HHHHHHHHhcCCCCCCC
Confidence            9999999999999999999999999999999999998 88999999999999987   2232 334444555678888 9


Q ss_pred             CCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          231 GEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      .+|+|+|++++||+++.+.++||+.|.+|
T Consensus       240 ~~~~dva~~v~~l~s~~~~~~tG~~~~vd  268 (276)
T 1mxh_A          240 ASAAQIADAIAFLVSKDAGYITGTTLKVD  268 (276)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence            99999999999999999999999999887

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-48  Score=315.17  Aligned_cols=237  Identities=30%  Similarity=0.349  Sum_probs=210.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999988877777666   55789999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++         |+||++||..++.+.+....
T Consensus        80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~~~~  150 (253)
T 1hxh_A           80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG---------GSIINMASVSSWLPIEQYAG  150 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC---------EEEEEECCGGGTSCCTTBHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC---------CEEEEEcchhhcCCCCCCcc
Confidence            999999999988777888999999999999999999999999999998653         88999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCC--CeEEEEEecccccCCcccCCCChHHHHHH-hhh---hccCCCCCCHHHHHHHHHH
Q 024976          169 VSAAKAAVDSITRSLALEWGTDY--AIRVNGIAPGPIKDTAGVSKLAPEEIRSK-ATD---YMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~--gi~v~~i~pg~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~dva~~~~~  242 (259)
                      |++||++++.|+++++.|++ ++  ||+||+|+||+++|++......+ +.... +..   ..|.+|+.+|+|+|++++|
T Consensus       151 Y~~sK~a~~~~~~~la~e~~-~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~  228 (253)
T 1hxh_A          151 YSASKAAVSALTRAAALSCR-KQGYAIRVNSIHPDGIYTPMMQASLPK-GVSKEMVLHDPKLNRAGRAYMPERIAQLVLF  228 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEEESEECCHHHHHHSCT-TCCHHHHBCBTTTBTTCCEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hcCCCeEEEEEEeCCccCchhhhccch-hhhHHHHhhhhccCccCCCCCHHHHHHHHHH
Confidence            99999999999999999998 77  99999999999998754321111 11112 333   5678899999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.+.++||+.|.+|
T Consensus       229 l~s~~~~~~tG~~~~vd  245 (253)
T 1hxh_A          229 LASDESSVMSGSELHAD  245 (253)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HcCccccCCCCcEEEEC
Confidence            99999999999999887

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-47  Score=314.36  Aligned_cols=235  Identities=24%  Similarity=0.282  Sum_probs=201.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999999999999999887888999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.++...|
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~IV~isS~~~~~~~~~~~~Y  153 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRS--------GQIINIGSIGALSVVPTAAVY  153 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTCCCTTCHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------eEEEEEcCHHHcccCCCChhH
Confidence            999999999988888899999999999999999999999999999988764        999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      ++||+|+++|+++++.|+  + |||||+|+||+++|++..... .++..... . ....++.+|+|+|++++||+|+...
T Consensus       154 ~asKaal~~l~~~la~e~--~-gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~-~-~~~~~~~~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          154 CATKFAVRAISDGLRQES--T-NIRVTCVNPGVVESELAGTIT-HEETMAAM-D-TYRAIALQPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHC--S-SEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHhC--C-CCEEEEEecCCCcCccccccc-chhHHHHH-H-hhhccCCCHHHHHHHHHHHhcCCcc
Confidence            999999999999999997  4 899999999999987643322 21111111 1 1112357999999999999999999


Q ss_pred             ccccccccc
Q 024976          250 HRDLIHLLD  258 (259)
Q Consensus       250 ~~tG~~i~~  258 (259)
                      +++|+.+..
T Consensus       228 ~~~~~i~i~  236 (264)
T 3tfo_A          228 VDTTEITIR  236 (264)
T ss_dssp             EEEEEEEEE
T ss_pred             CccceEEEe
Confidence            999987754

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-47  Score=308.77  Aligned_cols=236  Identities=22%  Similarity=0.288  Sum_probs=209.3

Q ss_pred             CCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCC--CCHHHHHHHH
Q 024976            4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDV--RKREDAVRVV   80 (259)
Q Consensus         4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl--~~~~~~~~~~   80 (259)
                      +..+.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ .++.++.+|+  ++.+++++++
T Consensus         6 ~~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~   85 (247)
T 3i1j_A            6 SAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELA   85 (247)
T ss_dssp             CCCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHH
T ss_pred             CCCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHH
Confidence            345567899999999999999999999999999999999999999999998887664 5677777777  9999999999


Q ss_pred             HHHHHHcCCccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           81 ESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      +++.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++.        |+||++||..+
T Consensus        86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~~  157 (247)
T 3i1j_A           86 ARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSED--------ASIAFTSSSVG  157 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS--------EEEEEECCGGG
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------CeEEEEcchhh
Confidence            99999999999999999985 4567888999999999999999999999999999987654        89999999999


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          160 YTATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      ..+.++...|++||+|+++|+++++.|++ . .|||||+|+||+++|++.....          ...+..++.+|+|+|+
T Consensus       158 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~p~dva~  226 (247)
T 3i1j_A          158 RKGRANWGAYGVSKFATEGLMQTLADELE-GVTAVRANSINPGATRTGMRAQAY----------PDENPLNNPAPEDIMP  226 (247)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTSSEEEEEEECCCCSSHHHHHHS----------TTSCGGGSCCGGGGTH
T ss_pred             cCCCCCcchhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCcccCccchhcc----------cccCccCCCCHHHHHH
Confidence            99999999999999999999999999997 5 8999999999999975432111          1112245678999999


Q ss_pred             HHHHhcCccCCccccccccc
Q 024976          239 AALYLASDAAVHRDLIHLLD  258 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~  258 (259)
                      +++||+|+.++|+|||.|.+
T Consensus       227 ~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          227 VYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHhCchhccccCeeecC
Confidence            99999999999999999865

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.4e-47  Score=318.56  Aligned_cols=241  Identities=29%  Similarity=0.398  Sum_probs=211.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+. .+...+++...+.++.++.+|++|+++++++++++.+.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998654 55666777776778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-  165 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  165 (259)
                      +|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.  +        .|+||++||..+..+.+. 
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~--------~g~iv~isS~~~~~~~~~~  174 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I--------GGRLILMGSITGQAKAVPK  174 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T--------TCEEEEECCGGGTCSSCSS
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c--------CCeEEEEechhhccCCCCC
Confidence            99999999999988777888899999999999999999999999999982  2        289999999999887764 


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----C-----hHHHHHHhhh--hccCCCCCCHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----A-----PEEIRSKATD--YMAAYKFGEKW  234 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----~-----~~~~~~~~~~--~~~~~~~~~~~  234 (259)
                      ...|++||+++++|+++++.|++ ++||+||+|+||+++|++.....    .     .++....+..  ..|.+|+++|+
T Consensus       175 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  253 (283)
T 1g0o_A          175 HAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI  253 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHH
Confidence            88999999999999999999998 88999999999999987532210    0     1233344444  67889999999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |+|++++||+|+.+.|+||+.|.+|
T Consensus       254 dvA~~v~~l~s~~~~~itG~~i~vd  278 (283)
T 1g0o_A          254 DIARVVCFLASNDGGWVTGKVIGID  278 (283)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhCccccCcCCCEEEeC
Confidence            9999999999999999999999987

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=1.6e-47  Score=315.32  Aligned_cols=234  Identities=20%  Similarity=0.191  Sum_probs=204.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..      ..++.++.+|++|+++++++++++.+.+
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEKIY   85 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence            3478999999999999999999999999999999999977654321      2368899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.++..
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~--------g~IV~isS~~~~~~~~~~~  157 (266)
T 3p19_A           86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNC--------GTIINISSIAGKKTFPDHA  157 (266)
T ss_dssp             CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSCCTTCH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEcChhhCCCCCCCc
Confidence            99999999999988888999999999999999999999999999999988765        9999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhh-hhccCCCCCCHHHHHHHHHHhcCc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      .|++||+|+++|+++++.|++ ++|||||+|+||+++|++...... .+...... ...|.+|+++|+|||++++||++.
T Consensus       158 ~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~  235 (266)
T 3p19_A          158 AYCGTKFAVHAISENVREEVA-ASNVRVMTIAPSAVKTELLSHTTS-QQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQ  235 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBSSSGGGGCSC-HHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHS
T ss_pred             hHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCccccchhhcccc-hhhhHHHHhhcccccCCCCHHHHHHHHHHHHcC
Confidence            999999999999999999998 899999999999999876544433 33332222 245889999999999999999999


Q ss_pred             cCCcccccccc
Q 024976          247 AAVHRDLIHLL  257 (259)
Q Consensus       247 ~~~~~tG~~i~  257 (259)
                      ...+++++-++
T Consensus       236 ~~~~~~~~i~i  246 (266)
T 3p19_A          236 PQNVCIREIAL  246 (266)
T ss_dssp             CTTEEEEEEEE
T ss_pred             CCCccceeeEE
Confidence            88887776553

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=9e-48  Score=325.27  Aligned_cols=247  Identities=24%  Similarity=0.297  Sum_probs=211.5

Q ss_pred             CCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC----------hhhHHHHHHHHHhcCCCeEEEEcCCCCH
Q 024976            4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----------KTVLRSAVAALHSLGIPAIGLEGDVRKR   73 (259)
Q Consensus         4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~----------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   73 (259)
                      |..+.+++||+++||||++|||++++++|+++|++|++++|+          .+.+++..+++...+.++.++.+|++|+
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW   98 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            455667999999999999999999999999999999999987          6778888888887788899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEE
Q 024976           74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN  153 (259)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  153 (259)
                      ++++++++++.+.+|++|+||||||.....++.+.+.++|++.+++|+.+++.+++++.++|.+.....  ...+|+||+
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~--~~~~g~IV~  176 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAG--KAVDGRIIN  176 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCCEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccC--CCCCcEEEE
Confidence            999999999999999999999999998888888999999999999999999999999999997542100  011379999


Q ss_pred             eccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCH
Q 024976          154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       154 isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (259)
                      +||..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+|| +.|++....... ...    ...+..+..+|
T Consensus       177 isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG-~~t~~~~~~~~~-~~~----~~~~~~~~~~p  249 (322)
T 3qlj_A          177 TSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMG-RYGVTVNAIAPS-ARTRMTETVFAE-MMA----TQDQDFDAMAP  249 (322)
T ss_dssp             ECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCG
T ss_pred             EcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEecCC-CCCccchhhhhh-hhh----ccccccCCCCH
Confidence            99999999999999999999999999999999998 899999999999 877665443322 111    11222356799


Q ss_pred             HHHHHHHHHhcCccCCcccccccccC
Q 024976          234 WDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+|++++||+|+.+.|+||+.|.+|
T Consensus       250 edva~~v~~L~s~~~~~itG~~i~vd  275 (322)
T 3qlj_A          250 ENVSPLVVWLGSAEARDVTGKVFEVE  275 (322)
T ss_dssp             GGTHHHHHHHTSGGGGGCCSCEEEEE
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEEC
Confidence            99999999999999999999999886

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-47  Score=316.61  Aligned_cols=241  Identities=27%  Similarity=0.321  Sum_probs=201.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH---HhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---HSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~---~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++   ...+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888887777   33345688999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCC----CHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-c
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDL----SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-Y  160 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~  160 (259)
                      .+|++|+||||||.....++.+.    +.++|++.+++|+.++++++++++|.|++++         |+||++||..+ .
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---------g~iv~isS~~~~~  153 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK---------GEIVNISSIASGL  153 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCTTSSS
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC---------CeEEEEecccccc
Confidence            99999999999998766777777    9999999999999999999999999998753         88999999998 8


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-hHHH------HHHhhhhccCCCCCCH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEI------RSKATDYMAAYKFGEK  233 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~  233 (259)
                      .+.++...|++||+++++|+++++.|++ ++||+||+|+||++.|++...... .+..      ...+....|.+|+++|
T Consensus       154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  232 (278)
T 1spx_A          154 HATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQP  232 (278)
T ss_dssp             SCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCH
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCH
Confidence            8888899999999999999999999998 889999999999999876433211 1111      2334455688899999


Q ss_pred             HHHHHHHHHhcCccCCc-ccccccccC
Q 024976          234 WDIAMAALYLASDAAVH-RDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~-~tG~~i~~D  259 (259)
                      +|+|++++||+++.+.+ +||+.|.+|
T Consensus       233 ~dvA~~v~~l~s~~~~~~~tG~~~~vd  259 (278)
T 1spx_A          233 QDIAEVIAFLADRKTSSYIIGHQLVVD  259 (278)
T ss_dssp             HHHHHHHHHHHCHHHHTTCCSCEEEES
T ss_pred             HHHHHHHHHHcCccccCcccCcEEEEC
Confidence            99999999999988887 999999887

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=2.5e-47  Score=311.58  Aligned_cols=233  Identities=23%  Similarity=0.320  Sum_probs=191.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.        ...  .+.++.+|++|+++++++++++.+.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY--PFATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC--SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC--CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999998652        111  27889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.+...
T Consensus        73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~~  144 (250)
T 2fwm_X           73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRG--------GAIVTVASDAAHTPRIGMS  144 (250)
T ss_dssp             SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSCCTTCH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCC--------CEEEEECchhhCCCCCCCc
Confidence            99999999999887788889999999999999999999999999999987754        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHH-Hhhh-------hccCCCCCCHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KATD-------YMAAYKFGEKWDIAMA  239 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~dva~~  239 (259)
                      .|++||++++.|+++++.|++ ++||+||+|+||+++|++......+++..+ .+..       ..|.+|+.+|+|+|++
T Consensus       145 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~  223 (250)
T 2fwm_X          145 AYGASKAALKSLALSVGLELA-GSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANT  223 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC------------------------------------CHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhC-ccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHH
Confidence            999999999999999999998 889999999999999876433211111112 2222       4678899999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+++.+.++||+.|.+|
T Consensus       224 v~~l~s~~~~~~tG~~i~vd  243 (250)
T 2fwm_X          224 ILFLASDLASHITLQDIVVD  243 (250)
T ss_dssp             HHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHhCccccCCCCCEEEEC
Confidence            99999999999999999987

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-47  Score=313.60  Aligned_cols=240  Identities=23%  Similarity=0.264  Sum_probs=203.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3567999999999999999999999999999999776544 445555555556789999999999999999999999999


Q ss_pred             CCccEEEECCC--CCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc-cc-cccC
Q 024976           88 GKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LH-YTAT  163 (259)
Q Consensus        88 g~id~li~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~-~~~~  163 (259)
                      |++|+||||||  .....++.+.+.++|++.+++|+.+++.++++++|.|++++.        |+||++||. .+ ..+.
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~iss~~~~~~~~~  155 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNF--------GRIINYGFQGADSAPGW  155 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTTGGGCCCC
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--------CeEEEEeechhcccCCC
Confidence            99999999999  445577888999999999999999999999999999988765        999999987 44 5666


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ++...|++||+|+++|+++++.|++ ++||+||+|+||++.|++....  .++.........|.+|+++|+|+|++++||
T Consensus       156 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l  232 (264)
T 3i4f_A          156 IYRSAFAAAKVGLVSLTKTVAYEEA-EYGITANMVCPGDIIGEMKEAT--IQEARQLKEHNTPIGRSGTGEDIARTISFL  232 (264)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCGGGGSCC--HHHHHHC--------CCCCHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEccCCccCccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence            7789999999999999999999998 8899999999999997764432  244455556678899999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.++|||.|.+|
T Consensus       233 ~s~~~~~itG~~i~vd  248 (264)
T 3i4f_A          233 CEDDSDMITGTIIEVT  248 (264)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             cCcccCCCCCcEEEEc
Confidence            9999999999999987

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=7.7e-48  Score=315.01  Aligned_cols=236  Identities=23%  Similarity=0.290  Sum_probs=197.7

Q ss_pred             CCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHH
Q 024976            2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus         2 ~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ++|....++++|+++||||++|||++++++|+++|++|++++|+.+.++           .+.++.+|++|+++++++++
T Consensus        11 ~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~   79 (253)
T 2nm0_A           11 SSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYK   79 (253)
T ss_dssp             ---------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHH
Confidence            3466677899999999999999999999999999999999999865432           27789999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        82 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      ++.+.+|++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.        |+||++||..+..
T Consensus        80 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~  151 (253)
T 2nm0_A           80 EIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKK--------GRVVLISSVVGLL  151 (253)
T ss_dssp             HHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTC--------EEEEEECCCCCCC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CEEEEECchhhCC
Confidence            99999999999999999887778888899999999999999999999999999987654        8999999999998


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +.+....|++||++++.|+++++.|++ +.||+||+|+||+++|++... .. ++....+....|.+|+.+|+|+|++++
T Consensus       152 ~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~-~~-~~~~~~~~~~~p~~~~~~p~dvA~~i~  228 (253)
T 2nm0_A          152 GSAGQANYAASKAGLVGFARSLARELG-SRNITFNVVAPGFVDTDMTKV-LT-DEQRANIVSQVPLGRYARPEEIAATVR  228 (253)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchhh-cC-HHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            888899999999999999999999998 899999999999999775432 22 222233445568889999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+++.+.++||+.|.+|
T Consensus       229 ~l~s~~~~~~tG~~i~vd  246 (253)
T 2nm0_A          229 FLASDDASYITGAVIPVD  246 (253)
T ss_dssp             HHHSGGGTTCCSCEEEES
T ss_pred             HHhCccccCCcCcEEEEC
Confidence            999999999999999987

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-47  Score=315.10  Aligned_cols=237  Identities=32%  Similarity=0.433  Sum_probs=206.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.++...+++.    ++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF   80 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999887776665542    37889999999999999999999999


Q ss_pred             CCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      |++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.++.         |+||++||..+..+.+..
T Consensus        81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~~  151 (270)
T 1yde_A           81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ---------GNVINISSLVGAIGQAQA  151 (270)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCHHHHHCCTTC
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC---------CEEEEEcCccccCCCCCC
Confidence            99999999999864 46778899999999999999999999999999997652         899999999998888889


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---CC-hHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---LA-PEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ..|++||+++++|+++++.|++ ++||+||+|+||+++|++....   .. ............|.+|+++|+|+|++++|
T Consensus       152 ~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~  230 (270)
T 1yde_A          152 VPYVATKGAVTAMTKALALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVF  230 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999998 8999999999999998753211   11 11112222345688999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+ ++|+|||.|.+|
T Consensus       231 L~s~-~~~itG~~i~vd  246 (270)
T 1yde_A          231 LASE-ANFCTGIELLVT  246 (270)
T ss_dssp             HHHH-CTTCCSCEEEES
T ss_pred             Hccc-CCCcCCCEEEEC
Confidence            9998 799999999987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3e-47  Score=315.35  Aligned_cols=239  Identities=23%  Similarity=0.204  Sum_probs=209.3

Q ss_pred             CCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.+ .++..+++......+.++.+|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999876 44455555433234789999999999999999999999


Q ss_pred             cCCccEEEECCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           87 FGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        87 ~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +|++|+||||||....    .++.+.+.++|++.+++|+.++++++++++|.|++          +|+||++||..+..+
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~  151 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN----------GASVLTLSYLGSTKY  151 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSB
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc----------CCEEEEEecchhcCC
Confidence            9999999999998653    57778899999999999999999999999999864          289999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      .+....|++||+++++|+++++.|++ ++||+||+|+||+++|++.......++....+....|.+|+.+|+|+|++++|
T Consensus       152 ~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~  230 (275)
T 2pd4_A          152 MAHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMY  230 (275)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence            99999999999999999999999998 89999999999999987654322223444455566788999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.+.++||+.|.+|
T Consensus       231 l~s~~~~~~tG~~~~vd  247 (275)
T 2pd4_A          231 LLSSLSSGVSGEVHFVD  247 (275)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCccccCCCCCEEEEC
Confidence            99999999999999876

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2e-46  Score=305.77  Aligned_cols=234  Identities=29%  Similarity=0.335  Sum_probs=207.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999999888888888877677899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++         |+||++||..+..+.++...
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~~~~  154 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK---------GTVVQMSSIAGRVNVRNAAV  154 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGTCCCTTCHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC---------CEEEEEccHHhcCCCCCCcH
Confidence            999999999988778888999999999999999999999999999998753         78999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCC--CCHHHHHHHHHHhcCc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF--GEKWDIAMAALYLASD  246 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~l~s~  246 (259)
                      |++||+++++|+++++.|++ ++||+||+|+||+++|++... ...+...... ...| +|+  .+|+|+|++++||+++
T Consensus       155 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~-~~~~-~~~~~~~pedvA~~v~~l~s~  230 (247)
T 2jah_A          155 YQATKFGVNAFSETLRQEVT-ERGVRVVVIEPGTTDTELRGH-ITHTATKEMY-EQRI-SQIRKLQAQDIAEAVRYAVTA  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBSSSGGGG-CCCHHHHHHH-HHHT-TTSCCBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECCCCCCcchhc-ccchhhHHHH-Hhcc-cccCCCCHHHHHHHHHHHhCC
Confidence            99999999999999999998 899999999999999876433 2222222222 2234 566  8999999999999999


Q ss_pred             cCCcccccc
Q 024976          247 AAVHRDLIH  255 (259)
Q Consensus       247 ~~~~~tG~~  255 (259)
                      .+.+++++-
T Consensus       231 ~~~~~~~~i  239 (247)
T 2jah_A          231 PHHATVHEI  239 (247)
T ss_dssp             CTTEEEEEE
T ss_pred             CccCccceE
Confidence            888888763

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=2e-47  Score=314.15  Aligned_cols=240  Identities=24%  Similarity=0.242  Sum_probs=208.9

Q ss_pred             CCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +++++|+++||||+  +|||++++++|+++|++|++++|+.+ .++..+++......+.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999  99999999999999999999999875 3444445543222478999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           86 HFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      .+|++|+||||||....    .++.+.+.++|++.+++|+.++++++++++|.|++          +|+||++||..+..
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~  152 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE----------GGGIVTLTYYASEK  152 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE----------EEEEEEEECGGGTS
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc----------CCEEEEEecccccC
Confidence            99999999999998653    67778899999999999999999999999998864          28899999999999


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +.+....|++||++++.|+++++.|++ ++||+||+|+||+++|++.......++..+.+....|.+|+.+|+|+|++++
T Consensus       153 ~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~  231 (261)
T 2wyu_A          153 VVPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGL  231 (261)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            988999999999999999999999998 8899999999999998764332223444455566678899999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+++.+.++||+.|.+|
T Consensus       232 ~l~s~~~~~~tG~~~~vd  249 (261)
T 2wyu_A          232 FLLSPLASGITGEVVYVD  249 (261)
T ss_dssp             HHHSGGGTTCCSCEEEES
T ss_pred             HHcChhhcCCCCCEEEEC
Confidence            999999999999999887

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=9.7e-47  Score=310.18  Aligned_cols=236  Identities=25%  Similarity=0.283  Sum_probs=205.6

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .+|.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.
T Consensus        22 ~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           22 KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             chhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHH
Confidence            34566899999999999999999999999999999999999999999999998878889999999999999999999999


Q ss_pred             HHcCCccEEEECCCC-CCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           85 NHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      +.+|++|+||||||. ...+++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.
T Consensus       102 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~  173 (262)
T 3rkr_A          102 AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKR--------GHIINISSLAGKNPV  173 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------CEEEEECSSCSSCCC
T ss_pred             HhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------ceEEEEechhhcCCC
Confidence            999999999999998 45677888999999999999999999999999999988764        899999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ++...|++||+++++|+++++.|++ +.||+||+|+||+++|++....          ....+..++.+|+|+|++++||
T Consensus       174 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~p~dvA~~v~~l  242 (262)
T 3rkr_A          174 ADGAAYTASKWGLNGLMTSAAEELR-QHQVRVSLVAPGSVRTEFGVGL----------SAKKSALGAIEPDDIADVVALL  242 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCCcCCccccc----------ccccccccCCCHHHHHHHHHHH
Confidence            9999999999999999999999998 8899999999999997654321          1223456788999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++...+++|+.++.+
T Consensus       243 ~s~~~~~~~g~~~i~p  258 (262)
T 3rkr_A          243 ATQADQSFISEVLVRP  258 (262)
T ss_dssp             HTCCTTCCEEEEEEEC
T ss_pred             hcCccccccCcEEecc
Confidence            9999999999988754

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.4e-48  Score=316.35  Aligned_cols=240  Identities=25%  Similarity=0.317  Sum_probs=197.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..   .+   ..+.++.++.+|++|+++++++++.+.+ +
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~   77 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VA---DLGDRARFAAADVTDEAAVASALDLAET-M   77 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HH---HTCTTEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HH---hcCCceEEEECCCCCHHHHHHHHHHHHH-h
Confidence            568999999999999999999999999999999999965432   22   2356799999999999999999998877 8


Q ss_pred             CCccEEEECCCCCCCC----CCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           88 GKLDILVNAAAGNFLV----PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        88 g~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      |++|+||||||.....    +..+.+.++|++.+++|+.++++++++++|+|.+..........+|+||++||..+..+.
T Consensus        78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tl3_A           78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ  157 (257)
T ss_dssp             SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence            9999999999975432    233588999999999999999999999999998732111111224899999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccC-CCCCCHHHHHHHHHH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALY  242 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  242 (259)
                      ++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++... . +++....+....|. +|+++|+|+|++++|
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~-~-~~~~~~~~~~~~~~~~r~~~p~dva~~v~~  234 (257)
T 3tl3_A          158 IGQAAYSASKGGVVGMTLPIARDLA-SHRIRVMTIAPGLFDTPLLAS-L-PEEARASLGKQVPHPSRLGNPDEYGALAVH  234 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEecCccChhhhh-c-cHHHHHHHHhcCCCCCCccCHHHHHHHHHH
Confidence            9999999999999999999999998 899999999999999876543 3 34455566667787 899999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++  .|+|||.|.+|
T Consensus       235 l~s~--~~itG~~i~vd  249 (257)
T 3tl3_A          235 IIEN--PMLNGEVIRLD  249 (257)
T ss_dssp             HHHC--TTCCSCEEEES
T ss_pred             HhcC--CCCCCCEEEEC
Confidence            9986  79999999988

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1e-46  Score=313.70  Aligned_cols=240  Identities=25%  Similarity=0.226  Sum_probs=208.4

Q ss_pred             CCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.+ .++..+++......+.++.+|++|+++++++++++.+.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4889999999999  99999999999999999999999875 44445555432224788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           87 FGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        87 ~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +|++|+||||||....    .++.+.+.++|++.+++|+.++++++++++|.|.++         +|+||++||..+..+
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~  167 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR---------NGAIVTLSYYGAEKV  167 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS---------CCEEEEEECGGGTSB
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---------CCEEEEEccchhccC
Confidence            9999999999998653    567788999999999999999999999999998753         289999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      .+....|++||+++++|+++++.|++ ++||+||+|+||.++|++.......++..+.+....|.+|+.+|+|+|++++|
T Consensus       168 ~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~  246 (285)
T 2p91_A          168 VPHYNVMGIAKAALESTVRYLAYDIA-KHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVF  246 (285)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            88899999999999999999999998 89999999999999987643322223444455566788999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.+.++||+.|.+|
T Consensus       247 l~s~~~~~~tG~~~~vd  263 (285)
T 2p91_A          247 LCSDWARAITGEVVHVD  263 (285)
T ss_dssp             HTSGGGTTCCSCEEEES
T ss_pred             HcCCcccCCCCCEEEEC
Confidence            99999999999999887

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-47  Score=306.31  Aligned_cols=223  Identities=20%  Similarity=0.275  Sum_probs=192.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+|+++||||++|||++++++|+++|++|++++|+.+++++..+++..   ++.++.+|++|+++++++++++.+.+|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999999999988888877732   58999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++         ++||++||..+..+.+....|+
T Consensus        79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---------~~iv~isS~~~~~~~~~~~~Y~  149 (235)
T 3l6e_A           79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG---------GVLANVLSSAAQVGKANESLYC  149 (235)
T ss_dssp             SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---------EEEEEECCEECCSSCSSHHHHH
T ss_pred             cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---------CEEEEEeCHHhcCCCCCCcHHH
Confidence            9999999998778888999999999999999999999999999998753         7999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC-ccCC
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS-DAAV  249 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~  249 (259)
                      +||+|+++|+++++.|++ ++|||||+|+||+++|++......           .+..++.+|+|+|++++||++ +.+.
T Consensus       150 asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~~~~  217 (235)
T 3l6e_A          150 ASKWGMRGFLESLRAELK-DSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSSC  217 (235)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCCSSE
T ss_pred             HHHHHHHHHHHHHHHHhh-ccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCCCCc
Confidence            999999999999999998 899999999999999875432211           233578899999999999998 7889


Q ss_pred             cccccccc
Q 024976          250 HRDLIHLL  257 (259)
Q Consensus       250 ~~tG~~i~  257 (259)
                      +++|..+.
T Consensus       218 ~i~~i~~~  225 (235)
T 3l6e_A          218 HVTDLFIG  225 (235)
T ss_dssp             EEEEEEEE
T ss_pred             ceeeEEEe
Confidence            99998764

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=7.1e-47  Score=312.61  Aligned_cols=244  Identities=25%  Similarity=0.324  Sum_probs=206.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.++|+++||||++|||++++++|+++|++|+++ +|+.+.++...+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999999776 778888888888888778889999999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc-c
Q 024976           88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-Y  165 (259)
Q Consensus        88 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~  165 (259)
                      |++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.++..+     .+|+||++||..+..+.+ .
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~  177 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSG-----QGGAIVNVSSMAAILGSATQ  177 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCTHHHHCCTTT
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccC-----CCCEEEEEcchHhccCCCCC
Confidence            999999999998764 778889999999999999999999999999999874211     138999999999988766 6


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|++.|+++++.|++ ++||+||+|+||+++|++..... .++.........|.+|+++|+|+|++++||++
T Consensus       178 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s  255 (272)
T 4e3z_A          178 YVDYAASKAAIDTFTIGLAREVA-AEGIRVNAVRPGIIETDLHASGG-LPDRAREMAPSVPMQRAGMPEEVADAILYLLS  255 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHS
T ss_pred             cchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCCCcCCcccccC-ChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhC
Confidence            78899999999999999999998 88999999999999987654422 23334455666788999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       256 ~~~~~~tG~~i~vd  269 (272)
T 4e3z_A          256 PSASYVTGSILNVS  269 (272)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             CccccccCCEEeec
Confidence            99999999999887

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=4.1e-47  Score=312.90  Aligned_cols=239  Identities=21%  Similarity=0.192  Sum_probs=207.3

Q ss_pred             CCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+. ..++..+++........++.+|++|+++++++++++.+.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999  9999999999999999999999987 444455555433223578999999999999999999999


Q ss_pred             cCCccEEEECCCCCCC----CCCCC-CCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           87 FGKLDILVNAAAGNFL----VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      +|++|+||||||....    .++.+ .+.++|++.+++|+.++++++++++|.|.+.          |+||++||..+..
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------g~iv~isS~~~~~  154 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG----------SALLTLSYLGAER  154 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEEECGGGTS
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC----------CEEEEEcchhhcc
Confidence            9999999999997653    56667 8999999999999999999999999998642          8899999999999


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +.+....|++||+++++|+++++.|++ ++||+||+|+||+++|++.......++..+.+....|.+|+.+|+|+|++++
T Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~  233 (265)
T 1qsg_A          155 AIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA  233 (265)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            988899999999999999999999998 8999999999999998765432222344445556678899999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+++.+.++||+.|.+|
T Consensus       234 ~l~s~~~~~~tG~~~~vd  251 (265)
T 1qsg_A          234 FLCSDLSAGISGEVVHVD  251 (265)
T ss_dssp             HHTSGGGTTCCSCEEEES
T ss_pred             HHhCchhcCccCCEEEEC
Confidence            999999999999999887

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.8e-46  Score=308.22  Aligned_cols=232  Identities=29%  Similarity=0.359  Sum_probs=208.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..   ++.++.+|++|+++++++++++.+.+|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999998877776666542   488899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..++.+.++...
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~  152 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGR--------GSIINISSIEGLAGTVACHG  152 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTBHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEEeehhhcCCCCCchh
Confidence            9999999999887778888999999999999999999999999999987654        89999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||++++.|+++++.|++ ++||+||+|+||++.|++..  ..++    .+. ..|.+|+.+|+|+|++++||+++.+
T Consensus       153 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~--~~~~----~~~-~~~~~~~~~~~dvA~~v~~l~s~~~  224 (260)
T 1nff_A          153 YTATKFAVRGLTKSTALELG-PSGIRVNSIHPGLVKTPMTD--WVPE----DIF-QTALGRAAEPVEVSNLVVYLASDES  224 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSGGGT--TSCT----TCS-CCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEeCCCCCCccc--cchh----hHH-hCccCCCCCHHHHHHHHHHHhCccc
Confidence            99999999999999999998 88999999999999987543  2111    111 4577899999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      .++||+.|.+|
T Consensus       225 ~~~~G~~~~v~  235 (260)
T 1nff_A          225 SYSTGAEFVVD  235 (260)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCcCCEEEEC
Confidence            99999999887

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.8e-47  Score=312.13  Aligned_cols=227  Identities=26%  Similarity=0.350  Sum_probs=202.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..+         ..++.++.+|++|+++++++++++.+.+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            4578999999999999999999999999999999999865421         2368999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--Ccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWY  165 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~  165 (259)
                      |++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+  ..+
T Consensus        95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~~  166 (260)
T 3un1_A           95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGS--------GHIVSITTSLVDQPMVGMP  166 (260)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCTTTTSCBTTCC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------cEEEEEechhhccCCCCCc
Confidence            99999999999988888889999999999999999999999999999998765        99999999887643  445


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++..     ++....+....|.+|+++|+|+|++++||  
T Consensus       167 ~~~Y~~sKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~-----~~~~~~~~~~~p~~r~~~~~dva~av~~L--  238 (260)
T 3un1_A          167 SALASLTKGGLNAVTRSLAMEFS-RSGVRVNAVSPGVIKTPMHP-----AETHSTLAGLHPVGRMGEIRDVVDAVLYL--  238 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEEECCBCCTTSC-----GGGHHHHHTTSTTSSCBCHHHHHHHHHHH--
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEEeecCCCCCCCC-----HHHHHHHhccCCCCCCcCHHHHHHHHHHh--
Confidence            68899999999999999999998 89999999999999987643     23344556678999999999999999999  


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       239 ~~~~~itG~~i~vd  252 (260)
T 3un1_A          239 EHAGFITGEILHVD  252 (260)
T ss_dssp             HHCTTCCSCEEEES
T ss_pred             cccCCCCCcEEEEC
Confidence            67889999999987

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.2e-46  Score=318.81  Aligned_cols=230  Identities=26%  Similarity=0.294  Sum_probs=206.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-------HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------LRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      ++++||+++||||++|||++++++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            56899999999999999999999999999999999998764       56777788777888999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +++.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+.
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~--------g~IV~iSS~~~~  192 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKV--------AHILNISPPLNL  192 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSS--------CEEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCC--------CEEEEECCHHHc
Confidence            999999999999999999988888999999999999999999999999999999988764        899999999998


Q ss_pred             cc--CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeccc-ccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          161 TA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP-IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       161 ~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      .+  .+....|++||+++++|+++++.|++  .||+||+|+||. +.|+.          .+.+....+.+|+.+|+|+|
T Consensus       193 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~gIrvn~v~PG~~i~T~~----------~~~~~~~~~~~r~~~pedvA  260 (346)
T 3kvo_A          193 NPVWFKQHCAYTIAKYGMSMYVLGMAEEFK--GEIAVNALWPKTAIHTAA----------MDMLGGPGIESQCRKVDIIA  260 (346)
T ss_dssp             CGGGTSSSHHHHHHHHHHHHHHHHHHHHTT--TTCEEEEEECSBCBCCHH----------HHHHCC--CGGGCBCTHHHH
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCccccHH----------HHhhccccccccCCCHHHHH
Confidence            77  67889999999999999999999995  689999999995 76532          22334445678899999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++||+++ +.++||+.| +|
T Consensus       261 ~~v~~L~s~-~~~itG~~i-vd  280 (346)
T 3kvo_A          261 DAAYSIFQK-PKSFTGNFV-ID  280 (346)
T ss_dssp             HHHHHHHTS-CTTCCSCEE-EH
T ss_pred             HHHHHHHhc-CCCCCceEE-EC
Confidence            999999999 999999987 55

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=2.5e-47  Score=313.21  Aligned_cols=240  Identities=20%  Similarity=0.168  Sum_probs=209.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHH---cCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~---~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      +++++|+++||||++|||++++++|++   +|++|++++|+.+.+++..+++...  +.++.++.+|++|++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            457899999999999999999999999   8999999999998888888888654  55789999999999999999999


Q ss_pred             HHH--HcCCcc--EEEECCCCCCC--CCCCC-CCHHHHHHHHhccchhHHHHHHHHHHHHHhc--CCCCCCCCCCceEEE
Q 024976           83 TIN--HFGKLD--ILVNAAAGNFL--VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKG--GRGQASSSSGGIIIN  153 (259)
Q Consensus        83 ~~~--~~g~id--~li~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~~~~~~g~iv~  153 (259)
                      +.+  .+|++|  +||||||....  .++.+ .+.++|++.+++|+.++++++++++|.|+++  +        +|+||+
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--------~g~iv~  153 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL--------SKTVVN  153 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC--------EEEEEE
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--------CceEEE
Confidence            988  678899  99999997643  46667 6899999999999999999999999999765  3        389999


Q ss_pred             eccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---ChHHHHHHhhhhccCCCC
Q 024976          154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKF  230 (259)
Q Consensus       154 isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~  230 (259)
                      +||..++.+.++...|++||+|+++|+++++.|++ +  ||||+|+||+++|++.....   ..++..+.+....|.+|+
T Consensus       154 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~  230 (259)
T 1oaa_A          154 ISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEP-S--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGAL  230 (259)
T ss_dssp             ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCT-T--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCS
T ss_pred             EcCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCC-C--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCc
Confidence            99999999999999999999999999999999996 4  99999999999976532211   123334445566788999


Q ss_pred             CCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          231 GEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      .+|+|+|++++||+++ ..|+|||.|.+|
T Consensus       231 ~~p~dvA~~v~~l~~~-~~~itG~~i~vd  258 (259)
T 1oaa_A          231 VDCGTSAQKLLGLLQK-DTFQSGAHVDFY  258 (259)
T ss_dssp             BCHHHHHHHHHHHHHH-CCSCTTEEEETT
T ss_pred             CCHHHHHHHHHHHHhh-ccccCCcEEecc
Confidence            9999999999999986 789999999987

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.9e-46  Score=304.47  Aligned_cols=230  Identities=30%  Similarity=0.375  Sum_probs=203.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++||||++|||++++++|+++|++|++++|+.++   ..+++   +  +.++.+|+++ ++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id   72 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH   72 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999998765   23333   2  7789999999 999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--ccchhh
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQIHV  169 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~Y  169 (259)
                      +||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.        |+||++||..++.+.  ++...|
T Consensus        73 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~~~Y  144 (239)
T 2ekp_A           73 VLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGW--------GRVLFIGSVTTFTAGGPVPIPAY  144 (239)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTSCCHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECchhhccCCCCCCCccH
Confidence            9999999887788889999999999999999999999999999987654        899999999998887  888999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      ++||++++.|+++++.|++ ++||+||+|+||++.|++.......++....+....|.+|+.+|+|+|++++||+++.+.
T Consensus       145 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~  223 (239)
T 2ekp_A          145 TTAKTALLGLTRALAKEWA-RLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAE  223 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            9999999999999999998 889999999999999875432111233334455567889999999999999999999999


Q ss_pred             cccccccccC
Q 024976          250 HRDLIHLLDD  259 (259)
Q Consensus       250 ~~tG~~i~~D  259 (259)
                      ++||+.|.+|
T Consensus       224 ~~tG~~~~vd  233 (239)
T 2ekp_A          224 YLTGQAVAVD  233 (239)
T ss_dssp             TCCSCEEEES
T ss_pred             CCCCCEEEEC
Confidence            9999999987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.6e-47  Score=314.46  Aligned_cols=239  Identities=26%  Similarity=0.313  Sum_probs=199.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC-CeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+. .+.++.+|++|+++++++++++.+.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999988888888865433 3589999999999999999999999


Q ss_pred             cCCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           87 FGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      +|++|+||||||.... .++.+.+.++|++.+++|+.++++++|+++|.|++++.      .+|+||++||..+..+.++
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~------~~g~IV~isS~~~~~~~~~  182 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTP------RGGRIINNGSISAQTPRPN  182 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS------CCEEEEEECCGGGTCCCTT
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC------CCcEEEEECCHHhCCCCCC
Confidence            9999999999998654 68889999999999999999999999999999988641      0389999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++...... .  ........+.+|+.+|||+|++++||+|
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~-~--~~~~~~~~~~~~~~~pedvA~~v~fL~s  258 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGR-MHDIACGQIDIGNAATDMTARMST-G--VLQANGEVAAEPTIPIEHIAEAVVYMAS  258 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEECBCC-------C-E--EECTTSCEEECCCBCHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECcCcChhhhhhcc-h--hhhhhhcccccCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999998 899999999999999875432211 1  0111233566789999999999999999


Q ss_pred             cc-CCccccccc
Q 024976          246 DA-AVHRDLIHL  256 (259)
Q Consensus       246 ~~-~~~~tG~~i  256 (259)
                      .+ ...+++..|
T Consensus       259 ~~~~~~i~~~~i  270 (281)
T 4dry_A          259 LPLSANVLTMTV  270 (281)
T ss_dssp             SCTTEEEEEEEE
T ss_pred             CCccCccccEEE
Confidence            54 555665554

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=6.3e-46  Score=304.74  Aligned_cols=246  Identities=27%  Similarity=0.319  Sum_probs=218.2

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +..+++++|+++||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|++|+++++++++++.
T Consensus         6 ~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            6 MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             TGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            33456899999999999999999999999999999999999888888888887767789999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           85 NHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      +.++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++.|.|.+++.        ++||++||..+..+.
T Consensus        86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~  157 (260)
T 3awd_A           86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQ--------GVIVAIGSMSGLIVN  157 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCC
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCC--------CEEEEEecchhcccC
Confidence            99999999999999876 677888999999999999999999999999999987654        899999999988877


Q ss_pred             ccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          164 WYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       164 ~~~--~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +..  ..|+++|++++.|+++++.|++ ++||+++.|+||.++|+........++....+....|.+++.+|+|+|++++
T Consensus       158 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (260)
T 3awd_A          158 RPQQQAAYNASKAGVHQYIRSLAAEWA-PHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQ  236 (260)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHH
T ss_pred             CCCCccccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence            766  8999999999999999999998 8899999999999998765412222334444555678889999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+++.+.+++|+.|.+|
T Consensus       237 ~l~~~~~~~~~G~~~~v~  254 (260)
T 3awd_A          237 FLASDAASLMTGAIVNVD  254 (260)
T ss_dssp             HHHSGGGTTCCSCEEEES
T ss_pred             HHhCchhccCCCcEEEEC
Confidence            999998999999999886

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=8.8e-47  Score=307.82  Aligned_cols=232  Identities=25%  Similarity=0.318  Sum_probs=197.3

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++           +..+.+|++|+++++++++++.+
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~   77 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEE   77 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHH
Confidence            3356889999999999999999999999999999999998754322           22488999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.+.
T Consensus        78 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  149 (247)
T 1uzm_A           78 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKF--------GRMIFIGSVSGLWGIGN  149 (247)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCCCC-----C
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------CEEEEECCHhhccCCCC
Confidence            9999999999999887778888999999999999999999999999999987654        89999999999998889


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||++++.|+++++.|++ ++||+||+|+||+++|++.. ... ++....+....|.+|+.+|+|+|++++||++
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~-~~~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s  226 (247)
T 1uzm_A          150 QANYAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTR-ALD-ERIQQGALQFIPAKRVGTPAEVAGVVSFLAS  226 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-HSC-HHHHHHHGGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCCcccchh-hcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            99999999999999999999998 88999999999999976533 222 3333445556788899999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.+.++||+.|.+|
T Consensus       227 ~~~~~~~G~~i~vd  240 (247)
T 1uzm_A          227 EDASYISGAVIPVD  240 (247)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             ccccCCcCCEEEEC
Confidence            99999999999987

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.1e-46  Score=310.20  Aligned_cols=232  Identities=22%  Similarity=0.276  Sum_probs=206.1

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+.           +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999998654           346889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.        |+||++||..+..+.++.
T Consensus        72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~  143 (264)
T 2dtx_A           72 YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRD--------PSIVNISSVQASIITKNA  143 (264)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS--------CEEEEECCGGGTSCCTTB
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------cEEEEECCchhccCCCCc
Confidence            999999999999887788889999999999999999999999999999987654        899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC-----ChH----HHHHHhhhhccCCCCCCHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APE----EIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      ..|++||++++.|+++++.|++ +. |+||+|+||+++|++.....     ..+    +....+....|.+|+++|+|+|
T Consensus       144 ~~Y~~sK~a~~~~~~~la~e~~-~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA  221 (264)
T 2dtx_A          144 SAYVTSKHAVIGLTKSIALDYA-PL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVA  221 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-TT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhc-CC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHH
Confidence            9999999999999999999998 77 99999999999976532210     011    2333444567889999999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++||+++.+.++||+.|.+|
T Consensus       222 ~~v~~l~s~~~~~~tG~~i~vd  243 (264)
T 2dtx_A          222 SAVAFLASREASFITGTCLYVD  243 (264)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHhCchhcCCCCcEEEEC
Confidence            9999999999999999999887

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=3.7e-47  Score=313.81  Aligned_cols=237  Identities=24%  Similarity=0.242  Sum_probs=203.4

Q ss_pred             CCCCCcEEEEeCC--ccchHHHHHHHHHHcCCeEEEEeCChhh-HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         8 ~~l~~k~~lItGa--~~giG~~~a~~l~~~G~~vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .++++|+++||||  ++|||++++++|+++|++|++++|+.++ +++..++   .+.++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHH
Confidence            3578999999999  9999999999999999999999998755 2443332   24568899999999999999999999


Q ss_pred             HHcC---CccEEEECCCCCC-----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 024976           85 NHFG---KLDILVNAAAGNF-----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA  156 (259)
Q Consensus        85 ~~~g---~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS  156 (259)
                      +.+|   ++|+||||||...     ..++.+.++++|++.+++|+.++++++++++|+|.++          |+||++||
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------g~iv~iss  149 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG----------GSIVGMDF  149 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEEEC
T ss_pred             HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC----------CeEEEEcC
Confidence            9999   9999999999865     4677889999999999999999999999999998653          88999999


Q ss_pred             ccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC---ChHH-------HHHHhhhhcc
Q 024976          157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEE-------IRSKATDYMA  226 (259)
Q Consensus       157 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~---~~~~-------~~~~~~~~~~  226 (259)
                      ..+ .+.+.+..|++||+++++|+++++.|++ ++|||||+|+||+++|++.....   .+++       ..+.+....|
T Consensus       150 ~~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  227 (269)
T 2h7i_A          150 DPS-RAMPAYNWMTVAKSALESVNRFVAREAG-KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP  227 (269)
T ss_dssp             CCS-SCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCT
T ss_pred             ccc-cccCchHHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCC
Confidence            876 6677889999999999999999999998 89999999999999987543210   1111       1233445678


Q ss_pred             CC-CCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          227 AY-KFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       227 ~~-~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      .+ |+++|+|+|++++||+|+.+.|+|||.|.+|
T Consensus       228 ~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vd  261 (269)
T 2h7i_A          228 IGWNMKDATPVAKTVCALLSDWLPATTGDIIYAD  261 (269)
T ss_dssp             TCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEES
T ss_pred             cccCCCCHHHHHHHHHHHhCchhccCcceEEEec
Confidence            88 6999999999999999999999999999987

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.2e-46  Score=309.42  Aligned_cols=236  Identities=25%  Similarity=0.359  Sum_probs=189.3

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +.++.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   99 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEK   99 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999998888877776   357899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           87 FGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      +|++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|++++.      .+|+||++||..+..+.++
T Consensus       100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~------~~g~IV~isS~~~~~~~~~  173 (272)
T 4dyv_A          100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP------RGGRIINNGSISATSPRPY  173 (272)
T ss_dssp             HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS------CCEEEEEECCSSTTSCCTT
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC------CCcEEEEECchhhcCCCCC
Confidence            9999999999998654 67888999999999999999999999999999987641      0289999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++..... ..  ........|.+|+.+|+|+|++++||+|
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~-~~--~~~~~~~~~~~~~~~pedvA~~v~fL~s  249 (272)
T 4dyv_A          174 SAPYTATKHAITGLTKSTSLDGR-VHDIACGQIDIGNADTPMAQKMK-AG--VPQADLSIKVEPVMDVAHVASAVVYMAS  249 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhC-ccCEEEEEEEECcccChhhhhhc-cc--chhhhhcccccCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999998 89999999999999987543321 11  1122234567889999999999999999


Q ss_pred             ccC-Ccccccc
Q 024976          246 DAA-VHRDLIH  255 (259)
Q Consensus       246 ~~~-~~~tG~~  255 (259)
                      .+. .++++..
T Consensus       250 ~~~~~~~~~i~  260 (272)
T 4dyv_A          250 LPLDANVQFMT  260 (272)
T ss_dssp             SCTTSCCCEEE
T ss_pred             CCCcCccceEE
Confidence            544 4444443

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-47  Score=307.69  Aligned_cols=234  Identities=24%  Similarity=0.287  Sum_probs=202.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+++++.. ++    .++.++.+|++|++++++    +.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~----~~~~~   72 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQ----FANEV   72 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHH----HHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHH----HHHHh
Confidence            3478999999999999999999999999999999999977655433 22    268899999999999884    44567


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc-cc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~  166 (259)
                      +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.+ +.
T Consensus        73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~  144 (246)
T 2ag5_A           73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKS--------GNIINMSSVASSVKGVVNR  144 (246)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCSBTTTBCCTTB
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------ceEEEEechHhCcCCCCCC
Confidence            89999999999877778888999999999999999999999999999987654        8999999999988877 88


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----ChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ..|++||++++.|+++++.|++ ++||+||+|+||+++|++.....    .+++....+....|.+|+.+|+|+|++++|
T Consensus       145 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~  223 (246)
T 2ag5_A          145 CVYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVY  223 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999998 88999999999999987533211    123333445556788899999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.+.++||+.|.+|
T Consensus       224 l~s~~~~~~tG~~i~vd  240 (246)
T 2ag5_A          224 LASDESAYVTGNPVIID  240 (246)
T ss_dssp             HHSGGGTTCCSCEEEEC
T ss_pred             HhCccccCCCCCEEEEC
Confidence            99999999999999987

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=3.9e-46  Score=306.20  Aligned_cols=244  Identities=30%  Similarity=0.470  Sum_probs=215.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999 777777888888766777899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.+++++++.|.+++.       .++||++||..+..+.++.
T Consensus        83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~  155 (261)
T 1gee_A           83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLF  155 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-------CCEEEEeCCHHhcCCCCCc
Confidence            999999999999877777788899999999999999999999999999987641       2899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|++||++++.|+++++.|++ +.||++|.|+||+++|++.......++....+....|.+++.+|+|+|++++||+++
T Consensus       156 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  234 (261)
T 1gee_A          156 VHYAASKGGMKLMTETLALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASS  234 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             cHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999998 889999999999999875432211123333444556788899999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.+++|+.|.+|
T Consensus       235 ~~~~~~G~~~~v~  247 (261)
T 1gee_A          235 EASYVTGITLFAD  247 (261)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             cccCCCCcEEEEc
Confidence            8999999999887

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=3.7e-46  Score=307.27  Aligned_cols=244  Identities=26%  Similarity=0.335  Sum_probs=191.3

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++.++++++++++.+
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            33568899999999999999999999999999999999998888888888877677899999999999999999999999


Q ss_pred             Hc-CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           86 HF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        86 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      .+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        ++||++||..+..+.+
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~  159 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGC--------GNIIFMSSIAGVVSAS  159 (266)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--------CEEEEEC---------
T ss_pred             HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEccchhccCCC
Confidence            99 89999999999877778888999999999999999999999999999987654        8999999999998888


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ....|+++|++++.|+++++.|++ ++||++|+|+||++.|++..... .+..........|.+++.+|+|+|++++||+
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (266)
T 1xq1_A          160 VGSIYSATKGALNQLARNLACEWA-SDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLC  237 (266)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHh-HhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            889999999999999999999998 88999999999999987654322 2223333445567788999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.+++|+.|.+|
T Consensus       238 ~~~~~~~~G~~~~v~  252 (266)
T 1xq1_A          238 MPAASYITGQTICVD  252 (266)
T ss_dssp             SGGGTTCCSCEEECC
T ss_pred             CccccCccCcEEEEc
Confidence            999999999999887

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=7.3e-46  Score=302.66  Aligned_cols=239  Identities=24%  Similarity=0.373  Sum_probs=212.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH-HhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ ...+.++.++.+|++|+++++++++++.+.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999988888877777 4445678999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCC---CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           91 DILVNAAAGNFLVP---AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        91 d~li~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |+||||||.....+   +.+.+.++|++.+++|+.+++.++++++|.|++++.        ++||++||..+..+.++..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~  153 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGA--------GVIVNIASVASLVAFPGRS  153 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTCH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------CEEEEECChhhccCCCCch
Confidence            99999999866555   778899999999999999999999999999987754        8999999999999988999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.|+++++.|++ ++||+++.|+||+++|++.......+.....+....|.+++++|+|+|+++++|+++.
T Consensus       154 ~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  232 (250)
T 2cfc_A          154 AYTTSKGAVLQLTKSVAVDYA-GSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGED  232 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTT
T ss_pred             hHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999999999999998 8899999999999998764331222334444555678889999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.++||+.|.+|
T Consensus       233 ~~~~~G~~~~v~  244 (250)
T 2cfc_A          233 ATYVNGAALVMD  244 (250)
T ss_dssp             CTTCCSCEEEES
T ss_pred             hhcccCCEEEEC
Confidence            999999999887

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-46  Score=304.37  Aligned_cols=238  Identities=30%  Similarity=0.311  Sum_probs=195.8

Q ss_pred             CCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +....++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.   .++.++.+|+++.+++++++++ 
T Consensus         6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~-   81 (249)
T 3f9i_A            6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISK-   81 (249)
T ss_dssp             ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHT-
T ss_pred             ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHh-
Confidence            345567999999999999999999999999999999999999988888777663   4688999999999999888764 


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                         ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.        |+||++||..++.+.
T Consensus        82 ---~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~  150 (249)
T 3f9i_A           82 ---TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRY--------GRIINISSIVGIAGN  150 (249)
T ss_dssp             ---CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCCCC--CC
T ss_pred             ---cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------cEEEEEccHHhccCC
Confidence               378999999999887777788889999999999999999999999999988764        899999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ++...|++||+|+++|+++++.|++ ++||+||+|+||++.|++... . .++....+....|.+|+.+|+|+|++++||
T Consensus       151 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  227 (249)
T 3f9i_A          151 PGQANYCASKAGLIGMTKSLSYEVA-TRGITVNAVAPGFIKSDMTDK-L-NEKQREAIVQKIPLGTYGIPEDVAYAVAFL  227 (249)
T ss_dssp             SCSHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBC-------C-CHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCccccCcccc-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999998 889999999999999765433 3 344455666778899999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.++||+.|.+|
T Consensus       228 ~s~~~~~~tG~~~~vd  243 (249)
T 3f9i_A          228 ASNNASYITGQTLHVN  243 (249)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             cCCccCCccCcEEEEC
Confidence            9999999999999887

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.2e-46  Score=307.69  Aligned_cols=241  Identities=22%  Similarity=0.245  Sum_probs=200.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH-c
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-F   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~-~   87 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            367999999999999999999999999999999999998888888888766777999999999999999999999886 8


Q ss_pred             CCccEEEECCC--CC-----CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           88 GKLDILVNAAA--GN-----FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        88 g~id~li~~ag--~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      |++|+||||||  ..     ...++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+.
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~  153 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQ--------GLIVVISSPGSL  153 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTC--------CEEEEECCGGGT
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCC--------cEEEEEcChhhc
Confidence            99999999995  32     3467788899999999999999999999999999987654        899999999887


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHH-HH-hh-hhccCCCCCCHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR-SK-AT-DYMAAYKFGEKWDIA  237 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~dva  237 (259)
                      .+. +...|++||+++++|+++++.|++ ++||+||+|+||+++|++.......+... .. .. ...|.+|..+|||+|
T Consensus       154 ~~~-~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va  231 (260)
T 2qq5_A          154 QYM-FNVPYGVGKAACDKLAADCAHELR-RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSG  231 (260)
T ss_dssp             SCC-SSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHH
T ss_pred             CCC-CCCchHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHH
Confidence            754 467899999999999999999998 88999999999999987654322211110 11 11 123456677999999


Q ss_pred             HHHHHhcCccC-CcccccccccC
Q 024976          238 MAALYLASDAA-VHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~-~~~tG~~i~~D  259 (259)
                      ++++||+|+.+ .|+||+.|.+|
T Consensus       232 ~~v~~l~s~~~~~~itG~~i~~~  254 (260)
T 2qq5_A          232 KCVVALATDPNILSLSGKVLPSC  254 (260)
T ss_dssp             HHHHHHHTCTTGGGGTTCEEEHH
T ss_pred             HHHHHHhcCcccccccceeechh
Confidence            99999999986 59999999764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-45  Score=305.26  Aligned_cols=241  Identities=29%  Similarity=0.341  Sum_probs=215.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.+++|+++||||++|||+++++.|+++|++|++++|+.+.++...+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999888888888887767789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.        ++||++||..+..+.++..
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~  191 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRY--------GRIINISSIVGLTGNVGQA  191 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTCH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------CEEEEECChhhccCCCCCc
Confidence            99999999999887788888999999999999999999999999999987654        8999999999998888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||++++.|+++++.|++ +.||+||+|+||.++|++... . .+.....+....|.+++.+|+|+|+++++|+++.
T Consensus       192 ~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~  268 (285)
T 2c07_A          192 NYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTDK-I-SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDK  268 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC------C-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeCcEecCchhh-c-CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCC
Confidence            999999999999999999998 889999999999999775432 2 2334444555678889999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.+++|+.|.+|
T Consensus       269 ~~~~~G~~i~v~  280 (285)
T 2c07_A          269 SGYINGRVFVID  280 (285)
T ss_dssp             GTTCCSCEEEES
T ss_pred             cCCCCCCEEEeC
Confidence            999999999887

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.1e-45  Score=306.76  Aligned_cols=242  Identities=22%  Similarity=0.247  Sum_probs=208.4

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++ +.
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~  100 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQ  100 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TT
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HH
Confidence            45689999999999999999999999999999999999998888877776   457999999999999999999999 88


Q ss_pred             cCCccEEEEC-CCCCCCCCC-----CCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           87 FGKLDILVNA-AAGNFLVPA-----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        87 ~g~id~li~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      ++++|++||| +|.....++     .+.+.++|++.+++|+.+++++++++++.|.+....  ....+|+||++||..+.
T Consensus       101 ~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~~~~g~iv~isS~~~~  178 (281)
T 3ppi_A          101 LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPR--ENGERGALVLTASIAGY  178 (281)
T ss_dssp             SSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCC--TTSCCEEEEEECCGGGT
T ss_pred             hCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccc--ccCCCeEEEEEeccccc
Confidence            8999999999 554444443     367889999999999999999999999999863210  00114899999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccC-CCCCCHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMA  239 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~  239 (259)
                      .+.++...|++||+|+++|+++++.|++ ++||+||+|+||++.|++... .. ++....+....|. +|+.+|+|+|++
T Consensus       179 ~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~-~~-~~~~~~~~~~~~~~~~~~~pedvA~~  255 (281)
T 3ppi_A          179 EGQIGQTAYAAAKAGVIGLTIAAARDLS-SAGIRVNTIAPGTMKTPIMES-VG-EEALAKFAANIPFPKRLGTPDEFADA  255 (281)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-TC-HHHHHHHHHTCCSSSSCBCHHHHHHH
T ss_pred             CCCCCCcccHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcCCchhhhc-cc-HHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            9999999999999999999999999998 889999999999999765433 33 3445556666777 899999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+++  .++||+.|.+|
T Consensus       256 v~~l~s~--~~~tG~~i~vd  273 (281)
T 3ppi_A          256 AAFLLTN--GYINGEVMRLD  273 (281)
T ss_dssp             HHHHHHC--SSCCSCEEEES
T ss_pred             HHHHHcC--CCcCCcEEEEC
Confidence            9999975  79999999987

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=3e-45  Score=299.70  Aligned_cols=239  Identities=29%  Similarity=0.357  Sum_probs=210.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCe-EEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++ .++.+|++|.++++++++++.+ 
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~-   82 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEA-   82 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHh-
Confidence            4578999999999999999999999999999999999988877777666   3356 8899999999999999999988 


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.        ++||++||..+..+.+..
T Consensus        83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~  154 (254)
T 2wsb_A           83 VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGA--------GAIVNLGSMSGTIVNRPQ  154 (254)
T ss_dssp             HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCSSS
T ss_pred             hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEecchhccCCCCC
Confidence            899999999999877778888999999999999999999999999999988754        899999999988877777


Q ss_pred             --hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          167 --IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       167 --~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                        ..|++||++++.++++++.|++ ++||+++.|+||.+.|++.......++....+....|.+++.+|+|+|+++++|+
T Consensus       155 ~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  233 (254)
T 2wsb_A          155 FASSYMASKGAVHQLTRALAAEWA-GRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLA  233 (254)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence              8999999999999999999998 8899999999999997654322112233444555668889999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.+++|+.|.+|
T Consensus       234 ~~~~~~~~G~~~~v~  248 (254)
T 2wsb_A          234 SPAASYVTGAILAVD  248 (254)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CcccccccCCEEEEC
Confidence            999999999999886

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=2e-45  Score=304.88  Aligned_cols=240  Identities=25%  Similarity=0.353  Sum_probs=212.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..+...+.+...+.++.++.+|++|.++++++++++.+.+
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999999887777777776667789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCC-CCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--C
Q 024976           88 GKLDILVNAAAGNFL-VPAE-DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--T  163 (259)
Q Consensus        88 g~id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~  163 (259)
                      |++|+||||||.... .++. +.+.++|++.+++|+.+++.+++.+++.|++++.        ++||++||..+..+  .
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~  181 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGK--------GSLIITSSISGKIVNIP  181 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCCTTSCC---
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CeEEEECchHhccCCCC
Confidence            999999999998765 6666 7888999999999999999999999999987654        89999999999887  7


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +....|++||++++.|+++++.|++ ++| +||+|+||+++|++.. .. +++....+....|.+|+.+|+|+|++++||
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~~-~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  257 (279)
T 3ctm_A          182 QLQAPYNTAKAACTHLAKSLAIEWA-PFA-RVNTISPGYIDTDITD-FA-SKDMKAKWWQLTPLGREGLTQELVGGYLYL  257 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTT-TTC-EEEEEEECSBSSTTTS-SC-CHHHHHHHHHHSTTCSCBCGGGTHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhc-ccC-CEEEEeccCCcccccc-cc-ChHHHHHHHHhCCccCCcCHHHHHHHHHHH
Confidence            7889999999999999999999998 889 9999999999987652 22 334444455667888999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.++||+.|.+|
T Consensus       258 ~s~~~~~~tG~~i~vd  273 (279)
T 3ctm_A          258 ASNASTFTTGSDVVID  273 (279)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             hCccccCccCCEEEEC
Confidence            9999999999999887

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=7.6e-45  Score=297.42  Aligned_cols=241  Identities=30%  Similarity=0.431  Sum_probs=216.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999999988888888887767789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||.....++ +.+.++|++.+++|+.++++++++++|.|.+++.        ++||++||..++.+.++..
T Consensus        87 ~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~  157 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGG--------GVILTITSMAAENKNINMT  157 (255)
T ss_dssp             SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTCCCTTCH
T ss_pred             CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcchhhcCCCCCCc
Confidence            999999999998766666 6889999999999999999999999999987654        8999999999999988999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.|+++++.|++ ..||++|.|+||.+.|++...... ++.........|.+++++|+|+|+++++|+++.
T Consensus       158 ~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  235 (255)
T 1fmc_A          158 SYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA  235 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHTTCC-HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGG
T ss_pred             ccHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecccCcchhhhhccC-hHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCc
Confidence            999999999999999999998 889999999999999765443333 334444555678889999999999999999998


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.+++|+.+.+|
T Consensus       236 ~~~~~G~~~~v~  247 (255)
T 1fmc_A          236 ASWVSGQILTVS  247 (255)
T ss_dssp             GTTCCSCEEEES
T ss_pred             cccCCCcEEEEC
Confidence            999999998876

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2e-46  Score=305.13  Aligned_cols=230  Identities=17%  Similarity=0.132  Sum_probs=199.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEE-e--CChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIM-G--RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~--r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +|+++||||++|||++++++|+++|++|+++ +  |+.+.+++..+++  .+       +|+.|+++++++++++.+.+|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999 6  9988777766665  12       123378888899999999999


Q ss_pred             CccEEEECCCCCCC---CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           89 KLDILVNAAAGNFL---VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        89 ~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      ++|+||||||....   .++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.+.
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~  143 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGG--------ASVIFITSSVGKKPLAY  143 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTSCCTT
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECChhhCCCCCC
Confidence            99999999998777   78889999999999999999999999999999988754        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCccc--CCCChHHHHHHhhh-hccCCCCCCHHHHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV--SKLAPEEIRSKATD-YMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~  242 (259)
                      ...|++||+++++|+++++.|++ ++||+||+|+||+++|++..  .....++....+.+ ..|.+|+.+|+|+|++++|
T Consensus       144 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~  222 (244)
T 1zmo_A          144 NPLYGPARAATVALVESAAKTLS-RDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITF  222 (244)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999998 88999999999999987641  21111122233344 5788999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.+.++||+.|.+|
T Consensus       223 l~s~~~~~~tG~~i~vd  239 (244)
T 1zmo_A          223 LASRRAAPIVGQFFAFT  239 (244)
T ss_dssp             HHTTTTGGGTTCEEEES
T ss_pred             HcCccccCccCCEEEeC
Confidence            99999999999999987

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=4.9e-45  Score=295.32  Aligned_cols=227  Identities=24%  Similarity=0.294  Sum_probs=202.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++|+++||||++|||++++++|+++|++|++++|+.+++++..+++. ..+.++.++.+|++|+++++++++++.+.+|+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999999999988888876 45778999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.++.         +++|+++|..+..+.+....|
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---------~~ii~~sS~~~~~~~~~~~~Y  151 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG---------GLALVTTSDVSARLIPYGGGY  151 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGSSCCTTCHHH
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---------CcEEEEecchhcccCCCcchH
Confidence            99999999998888899999999999999999999999999999996542         889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      ++||+++++|+++++  +. ..|||||+|+||+++|++.......          .+..++.+|+|+|++++||+++...
T Consensus       152 ~~sKaa~~~~~~~l~--~~-~~~i~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~p~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          152 VSTKWAARALVRTFQ--IE-NPDVRFFELRPGAVDTYFGGSKPGK----------PKEKGYLKPDEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             HHHHHHHHHHHHHHH--HH-CTTSEEEEEEECSBSSSTTTCCSCC----------CGGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHHHh--hc-CCCeEEEEEeCCccccccccccCCc----------ccccCCCCHHHHHHHHHHHHcCCCC
Confidence            999999999999994  44 6689999999999998765433221          1112678999999999999999999


Q ss_pred             cccccccccC
Q 024976          250 HRDLIHLLDD  259 (259)
Q Consensus       250 ~~tG~~i~~D  259 (259)
                      +++|+.++.|
T Consensus       219 ~~~~~~~~~~  228 (235)
T 3l77_A          219 VRVEELMLRS  228 (235)
T ss_dssp             CCCCEEEECC
T ss_pred             CccceEEEee
Confidence            9999998876

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-45  Score=300.78  Aligned_cols=243  Identities=21%  Similarity=0.347  Sum_probs=211.3

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.. .+.++.++.+|++|+++++++++++.+
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999976666655555542 356799999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++.       +++||++||..+..+.+.
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~  161 (265)
T 1h5q_A           89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQS  161 (265)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCEE
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCC-------CceEEEeCCchhhccccc
Confidence            9999999999999887778888999999999999999999999999999987542       389999999888766543


Q ss_pred             -------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          166 -------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       166 -------~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                             ...|++||++++.|+++++.|++ ++||+|+.|+||++.|++... . .++....+....|.+|+.+|+|+|+
T Consensus       162 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~  238 (265)
T 1h5q_A          162 SLNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYVNTDQTAH-M-DKKIRDHQASNIPLNRFAQPEEMTG  238 (265)
T ss_dssp             ETTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGGG-S-CHHHHHHHHHTCTTSSCBCGGGGHH
T ss_pred             cccccccccccHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCccccccccc-c-chhHHHHHHhcCcccCCCCHHHHHH
Confidence                   67899999999999999999998 889999999999999775443 2 2333444555678889999999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+++.+.+++|+.|.+|
T Consensus       239 ~~~~l~~~~~~~~~G~~~~v~  259 (265)
T 1h5q_A          239 QAILLLSDHATYMTGGEYFID  259 (265)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEC
T ss_pred             HHHhhccCchhcCcCcEEEec
Confidence            999999999999999999887

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=3.5e-45  Score=298.09  Aligned_cols=240  Identities=28%  Similarity=0.385  Sum_probs=193.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++||||++|||++++++|+++|++|+++ +|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999998 677777777778887767789999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        ++||++||..+..+.+...
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~  153 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKS--------GKIINITSIAGIIGNAGQA  153 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTC--------EEEEEECC---------CH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcChhhccCCCCCc
Confidence            99999999999877677778888999999999999999999999999987654        8999999998888888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.|+++++.|++ ..||++|.|+||++.|++.. .. ++.....+....|.+++.+|+|+|+++++|+++.
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  230 (247)
T 2hq1_A          154 NYAASKAGLIGFTKSIAKEFA-AKGIYCNAVAPGIIKTDMTD-VL-PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDD  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-TS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEEEEEeccchh-hc-chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999998 88999999999999876432 22 2333444555667888999999999999999998


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.+++|+.+.+|
T Consensus       231 ~~~~~G~~~~v~  242 (247)
T 2hq1_A          231 SNYITGQVINID  242 (247)
T ss_dssp             GTTCCSCEEEES
T ss_pred             cccccCcEEEeC
Confidence            999999998876

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.8e-46  Score=304.30  Aligned_cols=227  Identities=19%  Similarity=0.205  Sum_probs=199.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHH-cCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .++|+++||||++|||++++++|++ .|++|++++|+.+.          ....+.++.+|++|+++++++++.+.  ++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~   69 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--NV   69 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--TC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--hC
Confidence            4689999999999999999999999 78899999987651          12357899999999999999996553  78


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|+++          |+||++||..+..+.++...
T Consensus        70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~----------g~iv~~sS~~~~~~~~~~~~  139 (244)
T 4e4y_A           70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG----------ASIVFNGSDQCFIAKPNSFA  139 (244)
T ss_dssp             CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE----------EEEEEECCGGGTCCCTTBHH
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC----------cEEEEECCHHHccCCCCCch
Confidence            99999999999888889999999999999999999999999999998664          78999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC---------hHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|++......         .++.........|.+|+.+|+|+|++
T Consensus       140 Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  218 (244)
T 4e4y_A          140 YTLSKGAIAQMTKSLALDLA-KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAEL  218 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHH-HcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence            99999999999999999998 899999999999999775432211         12244556677889999999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+|+.+.|+||+.|.+|
T Consensus       219 v~~l~s~~~~~itG~~i~vd  238 (244)
T 4e4y_A          219 VIFLLSDKSKFMTGGLIPID  238 (244)
T ss_dssp             HHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHhcCccccccCCeEeEC
Confidence            99999999999999999987

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.5e-44  Score=302.83  Aligned_cols=246  Identities=32%  Similarity=0.502  Sum_probs=214.1

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +..++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|++|.++++++++++.
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            445689999999999999999999999999999999999998888888877654 6679999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.+|++|+||||||.....++.+.+.++|++.+++|+.+++.+++++++.|.++..       .++||++||..+..+.+
T Consensus       100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~  172 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSG  172 (302)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CEEEEEECCTHHHHCCT
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-------CCEEEEEcccccccCCC
Confidence            99999999999999877777888899999999999999999999999999974321       38999999999999988


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH-HHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      +...|++||++++.|+++++.|++ ++||++++|+||.+.|+.+.....+. .....+....|.+++++|+|+|+++++|
T Consensus       173 ~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l  251 (302)
T 1w6u_A          173 FVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFL  251 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence            999999999999999999999998 88999999999999987444333222 2223445567888999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++.+.+++|+.+.+|
T Consensus       252 ~~~~~~~~~G~~~~v~  267 (302)
T 1w6u_A          252 CSDYASWINGAVIKFD  267 (302)
T ss_dssp             TSGGGTTCCSCEEEES
T ss_pred             cCCcccccCCCEEEEC
Confidence            9999999999999876

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.8e-44  Score=294.53  Aligned_cols=242  Identities=27%  Similarity=0.359  Sum_probs=212.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++...+++... .++.++.+|++|+++++++++++.+.++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999988777777766432 5689999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.       +++||++||..++.+.++...
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~  154 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGA  154 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS-------CEEEEEECCGGGTSCCTTCHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC-------CCEEEEeCCchhccCCCCCcc
Confidence            9999999999887778888999999999999999999999999999987542       278999999999999899999


Q ss_pred             hHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          169 VSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      |++||++++.|+++++.|++ .+.||+++.|+||+++|++... ..............|.+++.+|+|+|+++++|+++.
T Consensus       155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  233 (251)
T 1zk4_A          155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE  233 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999974 2579999999999999765433 333333333445567888999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.+++|+.+.+|
T Consensus       234 ~~~~~G~~~~v~  245 (251)
T 1zk4_A          234 SKFATGSEFVVD  245 (251)
T ss_dssp             GTTCCSCEEEES
T ss_pred             cccccCcEEEEC
Confidence            999999999887

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.8e-45  Score=299.64  Aligned_cols=241  Identities=27%  Similarity=0.336  Sum_probs=207.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-------CCeEEEEcCCCCHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-------IPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-------~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+       .++.++.+|++|.++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4679999999999999999999999999999999999888777766665443       568899999999999999999


Q ss_pred             HHHHHcCCc-cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           82 STINHFGKL-DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        82 ~~~~~~g~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      ++.+.+|++ |+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|.+++.       .|+||++||..+.
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~  156 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC-------RGSIINISSIVGK  156 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCTHHH
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC-------CceEEEECChhhc
Confidence            999999999 99999999877777888899999999999999999999999999987641       2899999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+.++...|++||++++.|+++++.|++ ++||++++|+||++.|++... . .++....+....|.+++.+|+|+|+++
T Consensus       157 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (264)
T 2pd6_A          157 VGNVGQTNYAASKAGVIGLTQTAARELG-RHGIRCNSVLPGFIATPMTQK-V-PQKVVDKITEMIPMGHLGDPEDVADVV  233 (264)
T ss_dssp             HCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHH
T ss_pred             cCCCCChhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeecccccchhh-c-CHHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence            8989999999999999999999999998 889999999999999875432 2 223334444556778899999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++++.+.+++|+.+.+|
T Consensus       234 ~~l~~~~~~~~~G~~~~v~  252 (264)
T 2pd6_A          234 AFLASEDSGYITGTSVEVT  252 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHcCCcccCCCCCEEEEC
Confidence            9999998999999999876

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.3e-44  Score=294.76  Aligned_cols=240  Identities=28%  Similarity=0.377  Sum_probs=214.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++...+++.. .+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999999999998888887777754 46679999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++.        ++||++||..+..+.++..
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~  155 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRW--------GRIVNISSVVGFTGNVGQV  155 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTC--------EEEEEECCHHHHHCCTTCH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------cEEEEEccHHhcCCCCCCc
Confidence            99999999999877777788899999999999999999999999999987654        8999999998888888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|++++.|+++++.|++ +.||+++.|+||+++|++.. ... +.....+....|.+++.+|+|+|+++++|+++.
T Consensus       156 ~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~v~t~~~~-~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  232 (248)
T 2pnf_A          156 NYSTTKAGLIGFTKSLAKELA-PRNVLVNAVAPGFIETDMTA-VLS-EEIKQKYKEQIPLGRFGSPEEVANVVLFLCSEL  232 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGG-GSC-HHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeceecCchhh-hcc-HHHHHHHHhcCCCCCccCHHHHHHHHHHHhCch
Confidence            999999999999999999998 88999999999999976543 222 333344455567888999999999999999998


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.+++|+.+.+|
T Consensus       233 ~~~~~G~~~~v~  244 (248)
T 2pnf_A          233 ASYITGEVIHVN  244 (248)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hhcCCCcEEEeC
Confidence            899999999876

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=8.2e-45  Score=295.41  Aligned_cols=237  Identities=27%  Similarity=0.356  Sum_probs=211.6

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEE-EeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ||+++||||++|||++++++|+++|++|++ .+|+.+..+...+++...+.++.++.+|++|+++++++++++.+.+|++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999988 4888888888777777666789999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|.+++.        ++||++||..+..+.++...|+
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~Y~  152 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK--------GRIINIASVVGLIGNIGQANYA  152 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTCHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC--------CEEEEECChhhcCCCCCCccch
Confidence            99999999877777888899999999999999999999999999987654        8999999999988888899999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc-CccCC
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAAV  249 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~  249 (259)
                      ++|++++.|+++++.|++ +.||++|.|+||++.|++... .. +..........|.+|+.+|+|+|++++||+ ++.+.
T Consensus       153 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  229 (244)
T 1edo_A          153 AAKAGVIGFSKTAAREGA-SRNINVNVVCPGFIASDMTAK-LG-EDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAAS  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHT-TC-HHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGG
T ss_pred             hhHHHHHHHHHHHHHHhh-hcCCEEEEEeeCccccchhhh-cC-hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccC
Confidence            999999999999999998 889999999999999765432 22 233344555678889999999999999999 78889


Q ss_pred             cccccccccC
Q 024976          250 HRDLIHLLDD  259 (259)
Q Consensus       250 ~~tG~~i~~D  259 (259)
                      +++|+.|.+|
T Consensus       230 ~~~G~~~~v~  239 (244)
T 1edo_A          230 YITGQAFTID  239 (244)
T ss_dssp             GCCSCEEEES
T ss_pred             CcCCCEEEeC
Confidence            9999999886

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=4.9e-45  Score=297.62  Aligned_cols=232  Identities=23%  Similarity=0.250  Sum_probs=193.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++.   .++.++.+|++|+++++++++++.+.+|++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            689999999999999999999999999999999888777776663   46899999999999999999999999999999


Q ss_pred             EEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           93 LVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        93 li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.++...|++
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~~~Y~a  149 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH--------GHIINIGSTAGSWPYAGGNVYGA  149 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSCCTTCHHHHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------ceEEEEccchhccCCCCCchHHH
Confidence            999999863 567788999999999999999999999999999987654        89999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeccccc-CCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVH  250 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (259)
                      ||+++++|+++++.|++ ++|||||+|+||+++ |++.........  ...........+.+|+|+|++++||+|+ ..+
T Consensus       150 sKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~gT~~~~~~~~~~~--~~~~~~~~~~~~~~p~dvA~~v~~l~s~-~~~  225 (248)
T 3asu_A          150 TKAFVRQFSLNLRTDLH-GTAVRVTDIEPGLVGGTEFSNVRFKGDD--GKAEKTYQNTVALTPEDVSEAVWWVSTL-PAH  225 (248)
T ss_dssp             HHHHHHHHHHHHHHHTT-TSCCEEEEEEECSBCC------------------------CCBCHHHHHHHHHHHHHS-CTT
T ss_pred             HHHHHHHHHHHHHHHhh-hcCcEEEEEeccccccCcchhhcccCch--HHHHHHHhccCCCCHHHHHHHHHHHhcC-Ccc
Confidence            99999999999999998 899999999999999 775432111110  0011111122356999999999999997 578


Q ss_pred             ccccccccC
Q 024976          251 RDLIHLLDD  259 (259)
Q Consensus       251 ~tG~~i~~D  259 (259)
                      ++|+.|.+|
T Consensus       226 ~~g~~i~v~  234 (248)
T 3asu_A          226 VNINTLEMM  234 (248)
T ss_dssp             CCCCEEEEC
T ss_pred             ceeeEEEEc
Confidence            999998865

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-44  Score=302.55  Aligned_cols=242  Identities=32%  Similarity=0.497  Sum_probs=212.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-----cCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.++...+++..     .+.++.++.+|++|++++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            468899999999999999999999999999999999999888888888865     356799999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +.+.+|++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.+.++..        ++||++||.. ..+
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~-~~~  164 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHG--------GSIVNIIVPT-KAG  164 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC--------EEEEEECCCC-TTC
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC--------CeEEEEEeec-ccC
Confidence            9999999999999999877777788899999999999999999999999996554433        8999999988 778


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+....|+++|+++.+|+++++.|++ ++||++|+|+||++.|+.......  .++....+....|.+|+.+|+|+|+++
T Consensus       165 ~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i  243 (303)
T 1yxm_A          165 FPLAVHSGAARAGVYNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVV  243 (303)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHH
T ss_pred             CCcchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHH
Confidence            88889999999999999999999998 889999999999999874322221  122333445566888999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+++.+.++||+.|.+|
T Consensus       244 ~~l~~~~~~~~~G~~~~v~  262 (303)
T 1yxm_A          244 CFLLSPAASFITGQSVDVD  262 (303)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCcccccCCCcEEEEC
Confidence            9999999999999999886

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.5e-45  Score=302.21  Aligned_cols=238  Identities=19%  Similarity=0.248  Sum_probs=197.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+++ |+++||||++|||++++++|+++|++|++++|+.+.+++..+++... .++.++.+|++|+++++++++++.+.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4466 99999999999999999999999999999999998888887777543 568899999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEeccccccccCcc
Q 024976           88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATLHYTATWY  165 (259)
Q Consensus        88 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~~~  165 (259)
                      |++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|++++.        | +||++||..+..+.+.
T Consensus        96 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~--------g~~IV~isS~~~~~~~~~  167 (272)
T 2nwq_A           96 ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGA--------GASIVNLGSVAGKWPYPG  167 (272)
T ss_dssp             SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCT--------TCEEEEECCGGGTSCCTT
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CcEEEEeCCchhccCCCC
Confidence            999999999998753 77888999999999999999999999999999987654        7 9999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|+++|+++++|+++++.|++ ++||+||+|+||+++|++.........  ...........+.+|+|+|++++||++
T Consensus       168 ~~~Y~asKaa~~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~~l~s  244 (272)
T 2nwq_A          168 SHVYGGTKAFVEQFSLNLRCDLQ-GTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPEDIAETIFWIMN  244 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTCT-TSCCEEEEEEECSBC----------------------CCCCBCHHHHHHHHHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEcCCCcCcchhcccccch--HHHHHhhccCCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999998 899999999999999876432211110  001111112235799999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      + ..+++|+.|.+|
T Consensus       245 ~-~~~~~g~~i~v~  257 (272)
T 2nwq_A          245 Q-PAHLNINSLEIM  257 (272)
T ss_dssp             S-CTTEEEEEEEEE
T ss_pred             C-CccCccceEEEe
Confidence            7 578999998775

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.6e-45  Score=301.65  Aligned_cols=229  Identities=17%  Similarity=0.202  Sum_probs=200.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||++|||++++++|+++|++|++++|+.+.++...+ +...+.++..+     |+++++++++++.+.+|++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999999887777665 65545555544     677888899999999999999


Q ss_pred             EEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           93 LVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        93 li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      ||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.+....|++
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~Y~~  147 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKS--------GHIIFITSATPFGPWKELSTYTS  147 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCSTTTSCCTTCHHHHH
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECCcccccCCCCchHHHH
Confidence            99999987 6678888999999999999999999999999999987654        89999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccc---------cCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ||+++++|+++++.|++ ++||+||+|+||++         +|++...   .++....+....|.+|+.+|+|+|++++|
T Consensus       148 sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~  223 (254)
T 1zmt_A          148 ARAGACTLANALSKELG-EYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAF  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHG-GGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhh-hcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence            99999999999999998 88999999999999         6543221   12333444556788999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+++.+.++||+.|.+|
T Consensus       224 l~s~~~~~~tG~~~~vd  240 (254)
T 1zmt_A          224 LASGSCDYLTGQVFWLA  240 (254)
T ss_dssp             HHTTSCGGGTTCEEEES
T ss_pred             HhCcccCCccCCEEEEC
Confidence            99999999999999887

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=6.7e-47  Score=320.78  Aligned_cols=238  Identities=21%  Similarity=0.192  Sum_probs=201.1

Q ss_pred             CCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCCh---------hhHHHHHHHHHhc---CCCeEEEEcCCCCH--H
Q 024976           11 KGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRK---------TVLRSAVAALHSL---GIPAIGLEGDVRKR--E   74 (259)
Q Consensus        11 ~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~~---------~~~~~~~~~~~~~---~~~v~~~~~Dl~~~--~   74 (259)
                      ++|+++||||++  |||+++|++|+++|++|++.+++.         ++++...+.+...   ...+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999777664         2222222211111   12367899999988  7


Q ss_pred             ------------------HHHHHHHHHHHHcCCccEEEECCCCC--CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHH
Q 024976           75 ------------------DAVRVVESTINHFGKLDILVNAAAGN--FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY  134 (259)
Q Consensus        75 ------------------~~~~~~~~~~~~~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  134 (259)
                                        +++++++++.+.+|++|+||||||+.  ...++.+.+.++|++.+++|+.++++++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999974  4678889999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCceEEEeccccccccCccch-hhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecccccCCcccCCC
Q 024976          135 LKKGGRGQASSSSGGIIINISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKL  212 (259)
Q Consensus       135 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~i~pg~v~t~~~~~~~  212 (259)
                      |+++          |+||++||..+..+.+... .|++||+|+.+|+++|+.|++ + +||+||+|+||+++|++.....
T Consensus       161 m~~~----------g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~-~~~gI~vn~v~PG~v~T~~~~~~~  229 (329)
T 3lt0_A          161 MKPQ----------SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTISAGPLKSRAATAIN  229 (329)
T ss_dssp             EEEE----------EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCCCHHHHTCC
T ss_pred             HhhC----------CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhC-CccCeEEEEEecceeechhHhhhh
Confidence            9764          8899999999999999885 999999999999999999998 7 8999999999999987644321


Q ss_pred             C-------------------------------------------hHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          213 A-------------------------------------------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       213 ~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      .                                           .++..+......|.+|+++|+|||++++||+|+.+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~  309 (329)
T 3lt0_A          230 KLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESR  309 (329)
T ss_dssp             ------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGT
T ss_pred             hhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhc
Confidence            1                                           011244566778999999999999999999999999


Q ss_pred             cccccccccC
Q 024976          250 HRDLIHLLDD  259 (259)
Q Consensus       250 ~~tG~~i~~D  259 (259)
                      |+||+.|.+|
T Consensus       310 ~itG~~i~vd  319 (329)
T 3lt0_A          310 AITGQTIYVD  319 (329)
T ss_dssp             TCCSCEEEES
T ss_pred             cccCcEEEEc
Confidence            9999999988

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.9e-44  Score=296.75  Aligned_cols=242  Identities=22%  Similarity=0.288  Sum_probs=204.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF   84 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4688999999999999999999999999999999999988877777666   4578999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCC------CCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           88 GKLDILVNAAAGNFLVPAE------DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      |++|+||||||.....++.      +.+.++|++.+++|+.+++.+++++.|.|.++....  ....++||++||..+..
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~--~~~~~~iv~isS~~~~~  162 (265)
T 2o23_A           85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQ--GGQRGVIINTASVAAFE  162 (265)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCT--TSCCEEEEEECCTHHHH
T ss_pred             CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccc--CCCCcEEEEeCChhhcC
Confidence            9999999999987655444      378899999999999999999999999998762100  00138999999999999


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccC-CCCCCHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAA  240 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~  240 (259)
                      +.++...|++||++++.|+++++.|++ ++||+||+|+||+++|++... . +++....+....|. +|+.+|+|+|+++
T Consensus       163 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~dva~~~  239 (265)
T 2o23_A          163 GQVGQAAYSASKGGIVGMTLPIARDLA-PIGIRVMTIAPGLFGTPLLTS-L-PEKVCNFLASQVPFPSRLGDPAEYAHLV  239 (265)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeccccCccccc-c-CHHHHHHHHHcCCCcCCCCCHHHHHHHH
Confidence            988999999999999999999999998 889999999999999775432 2 22233334455677 8899999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||++  +.++||+.|.+|
T Consensus       240 ~~l~~--~~~~~G~~i~vd  256 (265)
T 2o23_A          240 QAIIE--NPFLNGEVIRLD  256 (265)
T ss_dssp             HHHHH--CTTCCSCEEEES
T ss_pred             HHHhh--cCccCceEEEEC
Confidence            99994  579999999887

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.2e-43  Score=293.81  Aligned_cols=242  Identities=25%  Similarity=0.290  Sum_probs=209.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..+...+++.. ..++.++.+|++|+++++++++++.+.+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            568999999999999999999999999999999999998777776666632 2368999999999999999999999999


Q ss_pred             CCccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc-
Q 024976           88 GKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-  164 (259)
Q Consensus        88 g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  164 (259)
                      +++|+||||||...  ..++.+.+.++|++.+++|+.++++++++++|.|.+++.        ++||++||..++.+.+ 
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~  162 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKK--------GSIVFTASISSFTAGEG  162 (278)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTC--------EEEEEECCGGGTCCCTT
T ss_pred             CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--------CeEEEEeeccccCCCCC
Confidence            99999999999764  357788899999999999999999999999999987654        8999999999998877 


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-hHHHHHHhhhh--ccCCCCCCHHHHHHHHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDY--MAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~dva~~~~  241 (259)
                      ....|+++|++++.|+++++.|++ ++||+++.|+||.+.|++...... .++....+...  .+.+++.+|+|+|++++
T Consensus       163 ~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (278)
T 2bgk_A          163 VSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVA  241 (278)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHH
Confidence            788999999999999999999998 889999999999999876544322 12222223222  24578999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+++.+.+++|+.+.+|
T Consensus       242 ~l~~~~~~~~~G~~~~v~  259 (278)
T 2bgk_A          242 YLAGDESKYVSGLNLVID  259 (278)
T ss_dssp             HHHSGGGTTCCSCEEEES
T ss_pred             HHcCcccccCCCCEEEEC
Confidence            999999999999999886

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=3.1e-44  Score=292.07  Aligned_cols=236  Identities=25%  Similarity=0.302  Sum_probs=204.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.    .+.++.+|++|+++++++++    .+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc
Confidence            45889999999999999999999999999999999999877766655432    35677999999999998876    56


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++++++++.+.|.+++.       .++||++||..+..+.++..
T Consensus        75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~  147 (244)
T 3d3w_A           75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRAVTNHS  147 (244)
T ss_dssp             CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred             CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CcEEEEeCchhhccCCCCCc
Confidence            89999999999877777888899999999999999999999999999987641       28999999999999988999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||++++.|+++++.|++ ++||+++.|+||.+.|++.......+.....+....|.+++.+|+|+|+++++|+++.
T Consensus       148 ~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 3d3w_A          148 VYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999998 8899999999999998764432222233344455678889999999999999999998


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.+++|+.+.+|
T Consensus       227 ~~~~~G~~~~v~  238 (244)
T 3d3w_A          227 SGMTTGSTLPVE  238 (244)
T ss_dssp             GTTCCSCEEEES
T ss_pred             ccCCCCCEEEEC
Confidence            899999999886

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=2.3e-44  Score=316.30  Aligned_cols=238  Identities=21%  Similarity=0.245  Sum_probs=203.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+++|+++||||++|||++++++|+++|++|++++|+... +...+.....  .+.++.||++|.++++++++++.+.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999987432 2333333222  35789999999999999999999999


Q ss_pred             CC-ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GK-LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ++ +|+||||||+...+.+.+.+.++|++.+++|+.+++++.+++.+.|.+++.        ++||++||..+..+.+++
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~--------g~iV~iSS~a~~~g~~g~  357 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEG--------GRVIGLSSMAGIAGNRGQ  357 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTT--------CEEEEECCHHHHHCCTTC
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC--------CEEEEEeChHhCCCCCCC
Confidence            86 999999999988888899999999999999999999999999999877654        899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+++|+++++|+++++.|++ ++||+||+|+||+++|++.... . ....+......+.+|+++|+|+|+++.||+|+
T Consensus       358 ~~YaasKaal~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~  434 (454)
T 3u0b_A          358 TNYATTKAGMIGLAEALAPVLA-DKGITINAVAPGFIETKMTEAI-P-LATREVGRRLNSLFQGGQPVDVAELIAYFASP  434 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEcCcccChhhhhc-c-hhhHHHHHhhccccCCCCHHHHHHHHHHHhCC
Confidence            9999999999999999999998 8999999999999998764332 1 12223334456788999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .+.|+|||.|.+|
T Consensus       435 ~a~~itG~~i~vd  447 (454)
T 3u0b_A          435 ASNAVTGNTIRVC  447 (454)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             ccCCCCCcEEEEC
Confidence            9999999999987

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=6.7e-44  Score=290.12  Aligned_cols=237  Identities=28%  Similarity=0.355  Sum_probs=211.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEE-EEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~-~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +|+++||||++|||++++++|+++|++|+++ +|+.+.+++..+++...+.++.+ +.+|++|.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4799999999999999999999999999988 89888888888888766667777 999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.        ++||++||..+..+.++...|
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~Y  152 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARF--------GRIVNITSVVGILGNPGQANY  152 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCSSBHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC--------CEEEEEeChhhccCCCCCcch
Confidence            999999999877777788899999999999999999999999999987654        899999999988888889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      +++|++++.++++++.|++ +.||+++.|+||++.|++.. ... +.....+....|.+++.+|+|+|+++++++++.+.
T Consensus       153 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  229 (245)
T 2ph3_A          153 VASKAGLIGFTRAVAKEYA-QRGITVNAVAPGFIETEMTE-RLP-QEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAG  229 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-TSC-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHH-HcCeEEEEEEEEeecCcchh-hcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999998 88999999999999976543 222 33344445566778899999999999999999889


Q ss_pred             cccccccccC
Q 024976          250 HRDLIHLLDD  259 (259)
Q Consensus       250 ~~tG~~i~~D  259 (259)
                      +++|+.+.+|
T Consensus       230 ~~~G~~~~v~  239 (245)
T 2ph3_A          230 YITGQTLCVD  239 (245)
T ss_dssp             TCCSCEEEES
T ss_pred             cccCCEEEEC
Confidence            9999999876

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=3.4e-44  Score=293.92  Aligned_cols=245  Identities=21%  Similarity=0.291  Sum_probs=213.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+ .+.++...+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999999 788888888887767789999999999999999999999999


Q ss_pred             CCccEEEECCCC-CCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cCcc
Q 024976           88 GKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWY  165 (259)
Q Consensus        88 g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~  165 (259)
                      |++|+||||||. ....++.+.+.++|++.+++|+.+++.++++++|.|.+++...   ...++||++||..+.. +.++
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~~~~~~~  160 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKAS---GQTSAVISTGSIAGHTGGGPG  160 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH---TSCEEEEEECCTHHHHCCCTT
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCC---CCCcEEEEecchhhccCCCCC
Confidence            999999999997 5667778889999999999999999999999999987542000   0027899999999887 7888


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||++++.++++++.|++ ++||++|.|+||.+.|++... . .+.....+....|.+++.+|+|+|++++++++
T Consensus       161 ~~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  237 (258)
T 3afn_B          161 AGLYGAAKAFLHNVHKNWVDFHT-KDGVRFNIVSPGTVDTAFHAD-K-TQDVRDRISNGIPMGRFGTAEEMAPAFLFFAS  237 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSGGGTT-C-CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhc-ccCeEEEEEeCCCcccccccc-c-CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhC
Confidence            89999999999999999999998 889999999999999775433 2 23344455566788899999999999999999


Q ss_pred             ccCC-cccccccccC
Q 024976          246 DAAV-HRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~-~~tG~~i~~D  259 (259)
                      +... +++|+.+.+|
T Consensus       238 ~~~~~~~~G~~~~v~  252 (258)
T 3afn_B          238 HLASGYITGQVLDIN  252 (258)
T ss_dssp             HHHHTTCCSEEEEES
T ss_pred             cchhccccCCEEeEC
Confidence            8777 9999999876

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=6.9e-44  Score=298.70  Aligned_cols=234  Identities=21%  Similarity=0.245  Sum_probs=199.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999999999999999999999999998878889999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|+|.+++.       +|+||++||..+..+.++..
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~  179 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT-------GGHIAFTASFAGLVPNAGLG  179 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-------CEEEEEECCGGGTSCCTTBH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCCCCch
Confidence            99999999999988888889999999999999999999999999999987652       38999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh--------HHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--------EEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      .|++||+|+++|+++++.|++ +.||+||+|+||+++|++.......        ......+.......++.+|+|+|+.
T Consensus       180 ~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~  258 (301)
T 3tjr_A          180 TYGVAKYGVVGLAETLAREVK-PNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARL  258 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHH
Confidence            999999999999999999998 8899999999999998754321100        0000111111223457799999999


Q ss_pred             HHHhcCccCC
Q 024976          240 ALYLASDAAV  249 (259)
Q Consensus       240 ~~~l~s~~~~  249 (259)
                      ++.++.....
T Consensus       259 i~~~l~~~~~  268 (301)
T 3tjr_A          259 TADAILANRL  268 (301)
T ss_dssp             HHHHHHHTCS
T ss_pred             HHHHHhcCCe
Confidence            9998865433

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-43  Score=286.65  Aligned_cols=229  Identities=18%  Similarity=0.229  Sum_probs=206.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-------eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-------~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ++|+++||||++|||++++++|+++|+       +|++++|+.+.++...+++...+.++.++.+|++|+++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            378999999999999999999999999       9999999988888888888766778999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+.++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.        ++||++||..++.+.
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~  152 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHS--------GHIFFITSVAATKAF  152 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCC
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------CEEEEEecchhcCCC
Confidence            999999999999999887778888999999999999999999999999999987654        899999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ++...|++||+++++|+++++.|++ ++||+++.|+||++.|++.... ..+.          ..++.+|+|+|++++++
T Consensus       153 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~-~~~~----------~~~~~~~~dva~~~~~l  220 (244)
T 2bd0_A          153 RHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAVYTPMWGKV-DDEM----------QALMMMPEDIAAPVVQA  220 (244)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCSTTTCCC-CSTT----------GGGSBCHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhh-ccCcEEEEEECCCccchhhhhc-cccc----------cccCCCHHHHHHHHHHH
Confidence            9999999999999999999999998 8999999999999998764332 1110          12578999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +++...+++|+.+..|
T Consensus       221 ~~~~~~~~~g~~~~~~  236 (244)
T 2bd0_A          221 YLQPSRTVVEEIILRP  236 (244)
T ss_dssp             HTSCTTEEEEEEEEEE
T ss_pred             HhCCccccchheEEec
Confidence            9999999999988764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=2.2e-44  Score=289.31  Aligned_cols=212  Identities=25%  Similarity=0.290  Sum_probs=187.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+                    +|++|+++++++++++    
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~----   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI----   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH----
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh----
Confidence            4678999999999999999999999999999999998764                    8999999999998754    


Q ss_pred             CCccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      |++|+||||||.. ..+++.+.+.++|++.+++|+.++++++++++|+|++.          |+||++||..+..+.++.
T Consensus        58 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----------g~iv~~sS~~~~~~~~~~  127 (223)
T 3uce_A           58 GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG----------GSITLTSGMLSRKVVANT  127 (223)
T ss_dssp             CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE----------EEEEEECCGGGTSCCTTC
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC----------eEEEEecchhhccCCCCc
Confidence            8999999999987 56788899999999999999999999999999998653          889999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH---HHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ..|+++|+++++|+++++.|++ +  ||||+|+||+++|++... ..+.   ...+...+..|.+|+.+|+|+|++++||
T Consensus       128 ~~Y~asK~a~~~~~~~la~e~~-~--i~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l  203 (223)
T 3uce_A          128 YVKAAINAAIEATTKVLAKELA-P--IRVNAISPGLTKTEAYKG-MNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFA  203 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-T--SEEEEEEECSBCSGGGTT-SCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhc-C--cEEEEEEeCCCcchhhhh-cchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHH
Confidence            9999999999999999999997 5  999999999999765443 3332   2334556778999999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      ++  +.++||+.|.+|
T Consensus       204 ~~--~~~~tG~~i~vd  217 (223)
T 3uce_A          204 IQ--NSYMTGTVIDVD  217 (223)
T ss_dssp             HH--CTTCCSCEEEES
T ss_pred             cc--CCCCCCcEEEec
Confidence            97  589999999987

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3e-44  Score=289.85  Aligned_cols=221  Identities=17%  Similarity=0.174  Sum_probs=188.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|+++.++++++++++.+   .+|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~   75 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS---IPST   75 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS---CCSE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh---cCCE
Confidence            68999999999999999999999999999999988877766655   55788999999999999999887654   3499


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      ||||||....+++.+.+.++|++.+++|+.++++++++++|.|.+++         ++||++||..+..+.+....|++|
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---------~~iv~isS~~~~~~~~~~~~Y~as  146 (230)
T 3guy_A           76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP---------VNVVMIMSTAAQQPKAQESTYCAV  146 (230)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC---------CEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CeEEEEeecccCCCCCCCchhHHH
Confidence            99999988888888999999999999999999999999999998753         689999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC-ccCCcc
Q 024976          173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS-DAAVHR  251 (259)
Q Consensus       173 K~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~  251 (259)
                      |+|+++|+++++.|++ ++||+||+|+||+++|++....          ....+.+++.+|+|+|++++|+++ +.+.|+
T Consensus       147 Kaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~i  215 (230)
T 3guy_A          147 KWAVKGLIESVRLELK-GKPMKIIAVYPGGMATEFWETS----------GKSLDTSSFMSAEDAALMIHGALANIGNGYV  215 (230)
T ss_dssp             HHHHHHHHHHHHHHTT-TSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCEETTEEE
T ss_pred             HHHHHHHHHHHHHHHH-hcCeEEEEEECCcccChHHHhc----------CCCCCcccCCCHHHHHHHHHHHHhCcCCCCc
Confidence            9999999999999998 8999999999999997654321          122356789999999999999987 789999


Q ss_pred             cccccccC
Q 024976          252 DLIHLLDD  259 (259)
Q Consensus       252 tG~~i~~D  259 (259)
                      ||+++..|
T Consensus       216 tg~~~~~~  223 (230)
T 3guy_A          216 SDITVNRE  223 (230)
T ss_dssp             EEEEEEC-
T ss_pred             cceeecCC
Confidence            99998765

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-43  Score=292.12  Aligned_cols=241  Identities=26%  Similarity=0.400  Sum_probs=213.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-ChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999 777777777888777778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCcc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~  165 (259)
                      ++++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.|++          +++||++||..++ .+.+.
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~  166 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR----------GGRIILTSSIAAVMTGIPN  166 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE----------EEEEEEECCGGGTCCSCCS
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------CCEEEEEcChHhccCCCCC
Confidence            999999999999877777778899999999999999999999999999873          2789999999988 77888


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC-----------CCChHHHHHHhhhhccCCCCCCHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS-----------KLAPEEIRSKATDYMAAYKFGEKW  234 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  234 (259)
                      ...|+++|++++.|+++++.|++ ..||+++.|+||.+.|++...           ....++....+....|.+++.+++
T Consensus       167 ~~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (274)
T 1ja9_A          167 HALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA  245 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHH
Confidence            99999999999999999999998 889999999999999765431           222134444555667888999999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+++++|+++...+++|+.+.+|
T Consensus       246 dva~~i~~l~~~~~~~~~G~~~~v~  270 (274)
T 1ja9_A          246 DIGRAVSALCQEESEWINGQVIKLT  270 (274)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhCcccccccCcEEEec
Confidence            9999999999998999999999876

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=1.3e-44  Score=305.02  Aligned_cols=243  Identities=24%  Similarity=0.229  Sum_probs=194.3

Q ss_pred             CCCCCCCcEEEEeCC--ccchHHHHHHHHHHcCCeEEEEeCChh------hHH-HHHHHHHhc--CC---CeEEEEcCC-
Q 024976            6 KGDILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKT------VLR-SAVAALHSL--GI---PAIGLEGDV-   70 (259)
Q Consensus         6 ~~~~l~~k~~lItGa--~~giG~~~a~~l~~~G~~vv~~~r~~~------~~~-~~~~~~~~~--~~---~v~~~~~Dl-   70 (259)
                      ..+++++|+++||||  ++|||++++++|+++|++|++++|+..      ... ...+++...  +.   .+.++.+|+ 
T Consensus         3 ~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   82 (315)
T 2o2s_A            3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAA   82 (315)
T ss_dssp             -CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTT
T ss_pred             CcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            345589999999999  899999999999999999999997641      000 001111111  11   124444443 


Q ss_pred             -----------C--------CHHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHH
Q 024976           71 -----------R--------KREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCH  129 (259)
Q Consensus        71 -----------~--------~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~  129 (259)
                                 +        |+++++++++++.+.+|++|+||||||+..  ..++.+.+.++|++.+++|+.++++++|
T Consensus        83 ~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           83 FDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             CSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                       3        356899999999999999999999999763  5677889999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecccccCCc
Q 024976          130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~i~pg~v~t~~  207 (259)
                      +++|+|++.          |+||++||..+..+.+.. ..|++||+|+++|+++++.|++ + +|||||+|+||+++|++
T Consensus       163 ~~~~~m~~~----------g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrvn~v~PG~v~T~~  231 (315)
T 2o2s_A          163 HFGPIMNEG----------GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAG-QKYGVRVNAISAGPLKSRA  231 (315)
T ss_dssp             HHSTTEEEE----------EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEECCCCCHH
T ss_pred             HHHHHHhcC----------CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhC-cccCeEEEEEecccccchh
Confidence            999998652          889999999999888877 5899999999999999999997 5 89999999999999865


Q ss_pred             ccCCCC--h----HHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          208 GVSKLA--P----EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       208 ~~~~~~--~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ......  .    ++..+.+....|.+|+++|+|+|++++||+|+.+.|+||+.|.+|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  289 (315)
T 2o2s_A          232 ASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVD  289 (315)
T ss_dssp             HHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEEC
Confidence            322110  0    122223345578999999999999999999999999999999987

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=4.4e-44  Score=324.39  Aligned_cols=227  Identities=24%  Similarity=0.313  Sum_probs=196.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh---------hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---------TVLRSAVAALHSLGIPAIGLEGDVRKREDAVR   78 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~   78 (259)
                      +++++|+++||||++|||+++++.|+++|++|++.+|+.         +.+++..+++...+.++   .+|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence            458899999999999999999999999999999998765         56777778887655433   358888888999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      +++++.+.||++|+||||||+....++.+.+.++|++.+++|+.|+++++|+++|+|++++.        |+||++||..
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~--------G~IVnisS~a  152 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKY--------GRIVNTSSPA  152 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEECCHH
Confidence            99999999999999999999887788999999999999999999999999999999988764        9999999999


Q ss_pred             ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      +..+.+....|++||+|+.+|+|+|+.|++ ++|||||+|+|| +.|++..... +++.          .+..+|||+|.
T Consensus       153 g~~~~~~~~~Y~asKaal~~lt~~la~El~-~~gIrVn~v~Pg-~~T~m~~~~~-~~~~----------~~~~~pe~vA~  219 (604)
T 2et6_A          153 GLYGNFGQANYASAKSALLGFAETLAKEGA-KYNIKANAIAPL-ARSRMTESIM-PPPM----------LEKLGPEKVAP  219 (604)
T ss_dssp             HHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-CCCHHHHTTS-CHHH----------HTTCSHHHHHH
T ss_pred             HcCCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEccC-CcCccccccC-Chhh----------hccCCHHHHHH
Confidence            999999999999999999999999999998 999999999998 5655422211 1111          12358999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+|+. .|+||+.|.+|
T Consensus       220 ~v~~L~s~~-~~itG~~~~vd  239 (604)
T 2et6_A          220 LVLYLSSAE-NELTGQFFEVA  239 (604)
T ss_dssp             HHHHHTSSS-CCCCSCEEEEE
T ss_pred             HHHHHhCCc-ccCCCCEEEEC
Confidence            999999998 99999999876

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-43  Score=286.11  Aligned_cols=236  Identities=25%  Similarity=0.298  Sum_probs=204.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    ..+.++.+|++|+++++++++    .+
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc
Confidence            4578999999999999999999999999999999999987766655443    246677999999999998876    56


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++.+++++.+.|.+++.       .++||++||..++.+.++..
T Consensus        75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~  147 (244)
T 1cyd_A           75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVTFPNLI  147 (244)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-------CeEEEEEcchhhcCCCCCcc
Confidence            88999999999877777888899999999999999999999999999987641       28999999999999988999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||++++.|+++++.|++ .+||+++.|+||.+.|++.......+.....+.+..|.+++.+++|+++++++++++.
T Consensus       148 ~Y~~sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 1cyd_A          148 TYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCch
Confidence            999999999999999999998 8899999999999997654322233344445555678889999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +.+++|+.|.+|
T Consensus       227 ~~~~~G~~~~v~  238 (244)
T 1cyd_A          227 SASTSGGGILVD  238 (244)
T ss_dssp             GTTCCSSEEEES
T ss_pred             hhcccCCEEEEC
Confidence            999999999876

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-43  Score=289.66  Aligned_cols=228  Identities=21%  Similarity=0.265  Sum_probs=194.2

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ....+++|+++||||++|||++++++|+++|++|++++|+.+..+    ++   + ++.++ +|+  .++++++++++  
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~--~~~~~~~~~~~--   79 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDL--RKDLDLLFEKV--   79 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCT--TTCHHHHHHHS--
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeH--HHHHHHHHHHh--
Confidence            345689999999999999999999999999999999999873322    22   2 56777 999  55667766654  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                        .++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.        |+||++||..++.+.++
T Consensus        80 --~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~  149 (249)
T 1o5i_A           80 --KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGW--------GRIVAITSFSVISPIEN  149 (249)
T ss_dssp             --CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTT
T ss_pred             --cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEcchHhcCCCCC
Confidence              38999999999877778888999999999999999999999999999988764        89999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHH-HhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ...|++||++++.|+++++.|++ ++||+||+|+||+++|++.... .+ .... .+....|.+|+.+|+|+|++++||+
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~-~~-~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~  226 (249)
T 1o5i_A          150 LYTSNSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKEL-LS-EEKKKQVESQIPMRRMAKPEEIASVVAFLC  226 (249)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHHH-SC-HHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCccCccccc-ch-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999998 8899999999999998764321 11 2222 3445678889999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.++||+.|.+|
T Consensus       227 s~~~~~~tG~~~~vd  241 (249)
T 1o5i_A          227 SEKASYLTGQTIVVD  241 (249)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CccccCCCCCEEEEC
Confidence            999999999999887

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.2e-43  Score=321.51  Aligned_cols=226  Identities=26%  Similarity=0.327  Sum_probs=194.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++||+++||||++|||+++++.|+++|++|++.+++.  +++..+++...+.++..+.+|++  .+.+++++++.+.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999998642  35566777666667778888884  55678899999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||+....++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+++.
T Consensus       394 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--------G~IVnisS~ag~~~~~~~~  465 (604)
T 2et6_A          394 GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQF--------GRIINITSTSGIYGNFGQA  465 (604)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCHHHHSCCTTBH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEECChhhccCCCCCh
Confidence            99999999999887788999999999999999999999999999999988764        9999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+|+.+|+|+|+.|++ ++|||||+|+||. .|++..... +++          ..+..+|+|||++++||+|+.
T Consensus       466 ~Y~asKaal~~lt~~la~El~-~~gIrVn~v~PG~-~T~m~~~~~-~~~----------~~~~~~pe~vA~~v~~L~s~~  532 (604)
T 2et6_A          466 NYSSSKAGILGLSKTMAIEGA-KNNIKVNIVAPHA-ETAMTLSIM-REQ----------DKNLYHADQVAPLLVYLGTDD  532 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred             hHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEcCCC-CCccccccC-chh----------hccCCCHHHHHHHHHHHhCCc
Confidence            999999999999999999998 9999999999995 766532211 111          123568999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      +. +||+.|.+|
T Consensus       533 ~~-itG~~~~vd  543 (604)
T 2et6_A          533 VP-VTGETFEIG  543 (604)
T ss_dssp             CC-CCSCEEEEE
T ss_pred             cC-CCCcEEEEC
Confidence            99 999999876

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=9e-44  Score=302.14  Aligned_cols=235  Identities=12%  Similarity=0.016  Sum_probs=196.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHH-cCCeEEEEeCChhhHH------------HHHHHHHhcCCCeEEEEcCCCCHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLR------------SAVAALHSLGIPAIGLEGDVRKREDA   76 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~-~G~~vv~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~Dl~~~~~~   76 (259)
                      -.+|++|||||++|||+++++.|++ +|++|++++|+.+..+            ...+++...+.++..+.+|++|++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4689999999999999999999999 9999999988755422            23445566677899999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHhccch
Q 024976           77 VRVVESTINHFGKLDILVNAAAGN-------------FLVPA---------------------EDLSPNGFRTVIEIDSV  122 (259)
Q Consensus        77 ~~~~~~~~~~~g~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~  122 (259)
                      +++++++.+.||++|+||||||..             ..+++                     .+.++++|++.+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            999999999999999999999974             23455                     67899999999999999


Q ss_pred             hHH-HHHHHHHHH-HHhcCCCCCCCCCCceEEEeccccccccCccc--hhhHHHHHHHHHHHHHHHHHhcCCC-CeEEEE
Q 024976          123 GTF-IMCHEALKY-LKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDY-AIRVNG  197 (259)
Q Consensus       123 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~-gi~v~~  197 (259)
                      +.| .+++++.+. |.++         +|+||++||..+..+.+.+  ..|++||+++++|+|+|+.|++ ++ |||||+
T Consensus       205 ~~~~~~~~~~~~~~m~~~---------gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela-~~~GIRVNa  274 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAE---------GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLA-AHGGGDARV  274 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEE---------EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH-TTTSCEEEE
T ss_pred             hHHHHHHHHHHHHhhhhC---------CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhC-cccCeEEEE
Confidence            998 788887764 4432         3899999999999988877  9999999999999999999999 99 999999


Q ss_pred             EecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          198 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       198 i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |+||.+.|++.......+.....+.  .+++|+++|||+++++.||+|+   +++|+.+.+|
T Consensus       275 VaPG~i~T~~s~~ip~~p~y~~~l~--~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D  331 (405)
T 3zu3_A          275 SVLKAVVSQASSAIPMMPLYLSLLF--KVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMD  331 (405)
T ss_dssp             EECCCCCCHHHHTSTTHHHHHHHHH--HHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBC
T ss_pred             EEeCCCcCchhhcCCCCcHHHHHHH--HHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcC
Confidence            9999999765433322222222222  2688999999999999999988   7788888777

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.2e-44  Score=305.82  Aligned_cols=241  Identities=25%  Similarity=0.222  Sum_probs=164.1

Q ss_pred             CCCCCcEEEEeCC--ccchHHHHHHHHHHcCCeEEEEeCCh-----------hhHH-----------HHHHHHHhcCC--
Q 024976            8 DILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRK-----------TVLR-----------SAVAALHSLGI--   61 (259)
Q Consensus         8 ~~l~~k~~lItGa--~~giG~~~a~~l~~~G~~vv~~~r~~-----------~~~~-----------~~~~~~~~~~~--   61 (259)
                      +++++|+++||||  ++|||++++++|+++|++|++++|+.           +.++           +..+++...+.  
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            4578999999999  89999999999999999999998753           1111           12233322221  


Q ss_pred             -CeEEEEcC--C----------CC--------HHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCCHHHHHHHHh
Q 024976           62 -PAIGLEGD--V----------RK--------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIE  118 (259)
Q Consensus        62 -~v~~~~~D--l----------~~--------~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~  118 (259)
                       ...++.+|  +          +|        +++++++++++.+.+|++|+||||||+..  ..++.+.+.++|++.++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence             12444443  2          32        45899999999999999999999999753  56778899999999999


Q ss_pred             ccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEE
Q 024976          119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVN  196 (259)
Q Consensus       119 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~  196 (259)
                      +|+.++++++|+++|+|.+.          |+||++||..+..+.+.. ..|++||+|+++|+|+++.|++ + +|||||
T Consensus       165 vN~~g~~~l~~~~~~~m~~~----------g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrvn  233 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKEG----------GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAG-RARAVRVN  233 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEEE----------EEEEEEEECC------------------THHHHHHHHHHHH-HHHCCEEE
T ss_pred             HhhHHHHHHHHHHHHHHhcC----------ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhc-cccCeeEE
Confidence            99999999999999999652          889999999999888877 6899999999999999999997 6 799999


Q ss_pred             EEecccccCCcccCCCC--hH----HHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          197 GIAPGPIKDTAGVSKLA--PE----EIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       197 ~i~pg~v~t~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+||+++|++......  .+    +..+.+....|.+|+++|+|+|++++||+|+.+.|+||+.|.+|
T Consensus       234 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vd  302 (319)
T 2ptg_A          234 CISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVD  302 (319)
T ss_dssp             EEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             EEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEEC
Confidence            99999999876432110  01    11122234568889999999999999999999999999999987

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=2.6e-43  Score=294.79  Aligned_cols=241  Identities=24%  Similarity=0.220  Sum_probs=194.7

Q ss_pred             CCCCCcEEEEeCCc--cchHHHHHHHHHHcCCeEEEEeCChhhHH-------HHHHHHHhc--CC--C-eEEEEcC----
Q 024976            8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLR-------SAVAALHSL--GI--P-AIGLEGD----   69 (259)
Q Consensus         8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~vv~~~r~~~~~~-------~~~~~~~~~--~~--~-v~~~~~D----   69 (259)
                      +++++|+++||||+  +|||++++++|+++|++|++++|+.....       ...+++...  +.  . ...+.+|    
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            45889999999999  99999999999999999999987632110       000111111  11  0 2334443    


Q ss_pred             ----CC----C--------HHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHH
Q 024976           70 ----VR----K--------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEA  131 (259)
Q Consensus        70 ----l~----~--------~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  131 (259)
                          ++    |        +++++++++++.+.+|++|+||||||+..  ..++.+.+.++|++.+++|+.++++++|++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                33    2        56899999999999999999999999753  567788999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCCceEEEeccccccccCccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecccccCCccc
Q 024976          132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGV  209 (259)
Q Consensus       132 ~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~i~pg~v~t~~~~  209 (259)
                      +|+|++.          |+||++||..+..+.+.. ..|++||+|+++|+++++.|++ + +|||||+|+||+++|++..
T Consensus       164 ~~~m~~~----------g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~~gi~vn~v~PG~v~T~~~~  232 (297)
T 1d7o_A          164 LPIMNPG----------GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKQNIRVNTISAGPLGSRAAK  232 (297)
T ss_dssp             GGGEEEE----------EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCBCCCSS
T ss_pred             HHHhccC----------ceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhC-cccCcEEEEEeccccccchhh
Confidence            9998652          889999999999888887 6899999999999999999997 5 7999999999999987654


Q ss_pred             CCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          210 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      .....++.........|.+|+.+|+|+|++++||+|+.+.++||+.|.+|
T Consensus       233 ~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vd  282 (297)
T 1d7o_A          233 AIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVD  282 (297)
T ss_dssp             CCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence            32222334444555678899999999999999999999999999999887

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=4.3e-43  Score=291.21  Aligned_cols=228  Identities=23%  Similarity=0.240  Sum_probs=194.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|.++++++++++.+.+|
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999999999999988777665543   55799999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.        |+||++||..+..+.++...
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~  150 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGS--------GSVVNISSFGGQLSFAGFSA  150 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTCCCTTCHH
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CEEEEEcCccccCCCCCchH
Confidence            9999999999887788889999999999999999999999999999988764        89999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC------ChH-----HHHHHhhhhccCCCCCCHHHHH
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APE-----EIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~------~~~-----~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      |++||+++++|+++++.|++ ++||+||+|+||++.|++.....      .+.     ..........+.+++.+|+|+|
T Consensus       151 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  229 (281)
T 3m1a_A          151 YSATKAALEQLSEGLADEVA-PFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAA  229 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHH
Confidence            99999999999999999998 88999999999999987643221      111     1112334446678899999999


Q ss_pred             HHHHHhcCccC
Q 024976          238 MAALYLASDAA  248 (259)
Q Consensus       238 ~~~~~l~s~~~  248 (259)
                      ++++++++...
T Consensus       230 ~a~~~~~~~~~  240 (281)
T 3m1a_A          230 AAIRLALDTEK  240 (281)
T ss_dssp             HHHHHHHHSSS
T ss_pred             HHHHHHHhCCC
Confidence            99999987643

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1e-43  Score=304.40  Aligned_cols=237  Identities=15%  Similarity=0.059  Sum_probs=194.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHH-cCCeEEEEeCChhhHH------------HHHHHHHhcCCCeEEEEcCCCCHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLR------------SAVAALHSLGIPAIGLEGDVRKREDAV   77 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~-~G~~vv~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~Dl~~~~~~~   77 (259)
                      .+|++|||||++|||+++++.|++ +|++|++++|+.+.++            ...+++...+.++..+.+|++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            589999999999999999999999 9999999998865432            234556666778999999999999999


Q ss_pred             HHHHHHHHHc-CCccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHhccch
Q 024976           78 RVVESTINHF-GKLDILVNAAAGN-------------FLVPA---------------------EDLSPNGFRTVIEIDSV  122 (259)
Q Consensus        78 ~~~~~~~~~~-g~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~  122 (259)
                      ++++++.+.| |++|+||||||..             ..+++                     .+.+.++|++.+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999972             23444                     36799999999999999


Q ss_pred             hHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 024976          123 GTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  199 (259)
Q Consensus       123 ~~~-~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~  199 (259)
                      +.+ .+++++.+.+....        +|+||++||..+..+.+.+  ..|++||+|+.+|+|+|+.|++ ++|||||+|+
T Consensus       220 ~~~~~~~~a~~~~~m~~~--------gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela-~~GIRVNaVa  290 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLAD--------GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLA-KHGGGANVAV  290 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEE--------EEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhhC--------CCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhC-ccCEEEEEEE
Confidence            987 78888876433222        3899999999999888877  8999999999999999999999 9999999999


Q ss_pred             cccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCccc-ccccccC
Q 024976          200 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRD-LIHLLDD  259 (259)
Q Consensus       200 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~t-G~~i~~D  259 (259)
                      ||++.|++.. .++..... ......|++|.++|||+++.+.||+|+.- |.+ |+...+|
T Consensus       291 PG~i~T~~~~-~ip~~~~~-~~~~~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d  348 (422)
T 3s8m_A          291 LKSVVTQASA-AIPVMPLY-ISMVYKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVD  348 (422)
T ss_dssp             ECCCCCTTGG-GSTHHHHH-HHHHHHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCC
T ss_pred             cCCCcChhhh-cCCCChHH-HHHHHhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccC
Confidence            9999987643 33322211 11223478999999999999999999854 765 5544244

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.9e-42  Score=290.97  Aligned_cols=240  Identities=21%  Similarity=0.254  Sum_probs=194.2

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC--CeEEEEcCCCCHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI--PAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      .++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.  ++.++.+|++|+++++++++++
T Consensus         2 ~m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            2 SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             -CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999999998888876554  7999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+.+|++|+||||||+...+++.+.+.++|++.+++|+.|+++++++++|.|.++....  ...+|+||++||..+..+.
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~--~~~~g~iV~isS~a~~~~~  159 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAG--EQKGGHVVNTASMAAFLAA  159 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTT--SCCCCEEEEECCGGGTCCC
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhcc--CCCCcEEEEecccccccCC
Confidence            99999999999999998888899999999999999999999999999999998750000  0013899999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHH-HH--------hhhhccC-CCCCCH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR-SK--------ATDYMAA-YKFGEK  233 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-~~--------~~~~~~~-~~~~~~  233 (259)
                      +....|++||+|+++|+++++.|++ +.||+|++|+||+|.|++........... ..        .....+. ....+|
T Consensus       160 ~~~~~Y~aSKaal~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  238 (319)
T 3ioy_A          160 GSPGIYNTTKFAVRGLSESLHYSLL-KYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEP  238 (319)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCCBC-----------------------------CCGGGSSBCH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCH
Confidence            9999999999999999999999998 88999999999999987654322111110 00        0011111 122689


Q ss_pred             HHHHHHHHHhcCccC
Q 024976          234 WDIAMAALYLASDAA  248 (259)
Q Consensus       234 ~dva~~~~~l~s~~~  248 (259)
                      +|+|+.++..+....
T Consensus       239 e~vA~~~~~al~~~~  253 (319)
T 3ioy_A          239 DVIGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHcCC
Confidence            999999999876543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.8e-42  Score=283.39  Aligned_cols=241  Identities=22%  Similarity=0.230  Sum_probs=202.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC--CCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...+  .++.++.+|++|+++++++++++.+
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999988888888887654  4588899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc--ccC
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY--TAT  163 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--~~~  163 (259)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++.+++.+++.|++++.+      +++||++||..+.  .+.
T Consensus       108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~------~g~iv~isS~~~~~~~~~  181 (279)
T 1xg5_A          108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD------DGHIININSMSGHRVLPL  181 (279)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC------SCEEEEECCGGGTSCCSC
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------CceEEEEcChhhcccCCC
Confidence            99999999999998877788889999999999999999999999999999876410      2799999999888  577


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ++...|+++|++++.|+++++.|++ ...||++|.|+||++.|++.........  .......+..++.+|+|+|++++|
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~dvA~~i~~  259 (279)
T 1xg5_A          182 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPEDVAEAVIY  259 (279)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH--HHHHHHHC---CBCHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh--hHHhhhcccccCCCHHHHHHHHHH
Confidence            7888999999999999999999985 2578999999999999875322211110  112223345678899999999999


Q ss_pred             hcCccCCccccccc
Q 024976          243 LASDAAVHRDLIHL  256 (259)
Q Consensus       243 l~s~~~~~~tG~~i  256 (259)
                      ++++...+.+|+-+
T Consensus       260 l~~~~~~~~~g~i~  273 (279)
T 1xg5_A          260 VLSTPAHIQIGDIQ  273 (279)
T ss_dssp             HHHSCTTEEEEEEE
T ss_pred             HhcCCcceEeeeEE
Confidence            99998888888543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=6.8e-42  Score=276.63  Aligned_cols=222  Identities=25%  Similarity=0.316  Sum_probs=190.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.++...+++.    ++.++.+|++|.++++++++++.+.++++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999999887776655542    58899999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |+||||||.....++.+.+.++|++.+++|+.+++++++.+++.|++++.        ++||++||..+..+.++...|+
T Consensus        80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~  151 (234)
T 2ehd_A           80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGG--------GTIVNVGSLAGKNPFKGGAAYN  151 (234)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC--------EEEEEECCTTTTSCCTTCHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------cEEEEECCchhcCCCCCCchhh
Confidence            99999999877778888999999999999999999999999999987654        8999999999999988999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCc
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVH  250 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  250 (259)
                      ++|++++.++++++.|++ ++||+++.|+||+++|++... . ++.    +       .+.+|+|+|+++++++++...+
T Consensus       152 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~----~-------~~~~~~dvA~~~~~l~~~~~~~  217 (234)
T 2ehd_A          152 ASKFGLLGLAGAAMLDLR-EANVRVVNVLPGSVDTGFAGN-T-PGQ----A-------WKLKPEDVAQAVLFALEMPGHA  217 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHG-GGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCCSS
T ss_pred             HHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCCcccc-c-ccc----c-------CCCCHHHHHHHHHHHhCCCccc
Confidence            999999999999999998 889999999999999765321 1 110    0       1469999999999999999999


Q ss_pred             cccccccc
Q 024976          251 RDLIHLLD  258 (259)
Q Consensus       251 ~tG~~i~~  258 (259)
                      ++|+.+..
T Consensus       218 ~~g~~~~~  225 (234)
T 2ehd_A          218 MVSEIELR  225 (234)
T ss_dssp             CCCEEECC
T ss_pred             ccceEEEe
Confidence            99987654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-42  Score=284.80  Aligned_cols=235  Identities=27%  Similarity=0.327  Sum_probs=194.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999988877777777542  346889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||...        .++|++.+++|+.+++.++++++|.|.+++..     ..|+||++||..++.+.+..
T Consensus        84 ~g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~  150 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQ  150 (267)
T ss_dssp             HSCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCGGGTSCCTTC
T ss_pred             cCCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCC-----CCCEEEEeCCccccCCCCCC
Confidence            999999999999642        35689999999999999999999999765310     02899999999999998899


Q ss_pred             hhhHHHHHHHHHHHHHH--HHHhcCCCCeEEEEEecccccCCcccCCCChHHH------HHHhhhhccCCCCCCHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSL--ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI------RSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~l--a~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~dva~  238 (259)
                      ..|++||+++++|++++  +.|++ +.|||||+|+||+++|++......++..      ........+..++.+|+|+|+
T Consensus       151 ~~Y~~sK~a~~~~~~~~ala~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~  229 (267)
T 2gdz_A          151 PVYCASKHGIVGFTRSAALAANLM-NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIAN  229 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhc-cCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHH
Confidence            99999999999999985  68898 8999999999999997653321111111      011111223345779999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+++.  ++||+.|.+|
T Consensus       230 ~v~~l~s~~--~~~G~~~~v~  248 (267)
T 2gdz_A          230 GLITLIEDD--ALNGAIMKIT  248 (267)
T ss_dssp             HHHHHHHCT--TCSSCEEEEE
T ss_pred             HHHHHhcCc--CCCCcEEEec
Confidence            999999875  4899998775

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=3.6e-42  Score=290.17  Aligned_cols=231  Identities=22%  Similarity=0.295  Sum_probs=196.6

Q ss_pred             CCCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe---------CChhhHHHHHHHHHhcCCCeEEEEcCCC
Q 024976            1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG---------RRKTVLRSAVAALHSLGIPAIGLEGDVR   71 (259)
Q Consensus         1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~---------r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   71 (259)
                      |.++   +++++|+++||||++|||++++++|+++|++|++++         |+.++++...+++...+..   ..+|++
T Consensus         1 M~~~---~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~   74 (319)
T 1gz6_A            1 MASP---LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYD   74 (319)
T ss_dssp             --CC---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECC
T ss_pred             CCCC---CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCC
Confidence            5544   358899999999999999999999999999999964         4667777777887665432   358999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceE
Q 024976           72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII  151 (259)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i  151 (259)
                      +.++++++++++.+.+|++|+||||||+....++.+.+.++|+..+++|+.++++++++++|+|++++.        |+|
T Consensus        75 ~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------grI  146 (319)
T 1gz6_A           75 SVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY--------GRI  146 (319)
T ss_dssp             CGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------EEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEE
Confidence            999999999999999999999999999877777888999999999999999999999999999988754        899


Q ss_pred             EEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCC
Q 024976          152 INISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG  231 (259)
Q Consensus       152 v~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (259)
                      |++||..+..+.++...|++||++++.|+++++.|++ ++||+||+|+||.+ |++..... +++..          +..
T Consensus       147 V~vsS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~-~~gI~vn~v~PG~~-t~~~~~~~-~~~~~----------~~~  213 (319)
T 1gz6_A          147 IMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNAG-SRMTETVM-PEDLV----------EAL  213 (319)
T ss_dssp             EEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEECC-STTTGGGS-CHHHH----------HHS
T ss_pred             EEECChhhccCCCCCHHHHHHHHHHHHHHHHHHHHhc-ccCEEEEEEeCCCc-cccccccC-Chhhh----------ccC
Confidence            9999999988888899999999999999999999998 89999999999998 65432222 22111          135


Q ss_pred             CHHHHHHHHHHhcCccCCcccccccccC
Q 024976          232 EKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       232 ~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+|+|++++||+++. .+++|+.|.+|
T Consensus       214 ~p~dvA~~~~~l~s~~-~~~tG~~~~v~  240 (319)
T 1gz6_A          214 KPEYVAPLVLWLCHES-CEENGGLFEVG  240 (319)
T ss_dssp             CGGGTHHHHHHHTSTT-CCCCSCEEEEE
T ss_pred             CHHHHHHHHHHHhCch-hhcCCCEEEEC
Confidence            8999999999999984 58999988765

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-41  Score=287.04  Aligned_cols=190  Identities=25%  Similarity=0.347  Sum_probs=168.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-----hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-----KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-----~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ++++|+++||||++|||++++++|+++|++|++++|+     .+.++.+.+.+...+.++.++.+|++|+++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999987665     45566666666666778999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-c
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-A  162 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~  162 (259)
                      .+.+|++|+||||||+...+++.+.+.++|++.+++|+.|+++++++++|+|++++.        |+||++||..+.. +
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~--------g~iV~isS~~~~~~~  153 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKH--------GLLIWISSSSSAGGT  153 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCC
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEecchhccCC
Confidence            999999999999999888888899999999999999999999999999999998765        9999999999884 4


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~  207 (259)
                      .+....|++||+|+++|+++++.|++ +.||+||+|+||.+.|+.
T Consensus       154 ~~~~~~Y~asKaa~~~~~~~la~el~-~~gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          154 PPYLAPYFAAKAAMDAIAVQYARELS-RWGIETSIIVPGAFTSGT  197 (324)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECCC----
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEECCccccCc
Confidence            56678899999999999999999998 899999999999998654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.1e-42  Score=314.47  Aligned_cols=232  Identities=24%  Similarity=0.297  Sum_probs=186.0

Q ss_pred             CCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC---------ChhhHHHHHHHHHhcCCCeEEEEcCCCCH
Q 024976            3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR---------RKTVLRSAVAALHSLGIPAIGLEGDVRKR   73 (259)
Q Consensus         3 ~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r---------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   73 (259)
                      .+....+++||+++||||++|||+++|++|+++|++|++++|         +.+.++...+++...+..+   .+|+++.
T Consensus        10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~   86 (613)
T 3oml_A           10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSV   86 (613)
T ss_dssp             -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCG
T ss_pred             CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCH
Confidence            355667899999999999999999999999999999999987         6677788888887665543   4799999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEE
Q 024976           74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN  153 (259)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  153 (259)
                      ++++++++++.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||+
T Consensus        87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~--------g~IV~  158 (613)
T 3oml_A           87 IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNY--------GRIIM  158 (613)
T ss_dssp             GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--------EEEEE
T ss_pred             HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------CEEEE
Confidence            9999999999999999999999999988888999999999999999999999999999999998765        99999


Q ss_pred             eccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCH
Q 024976          154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       154 isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (259)
                      +||..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||.+ |++..... ++..          .+..+|
T Consensus       159 isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~-~~gI~vn~v~Pg~~-t~~~~~~~-~~~~----------~~~~~p  225 (613)
T 3oml_A          159 TSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA-RNNVLCNVIVPTAA-SRMTEGIL-PDIL----------FNELKP  225 (613)
T ss_dssp             ECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-------CCCC-CHHH----------HTTCCG
T ss_pred             ECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEECCCC-Chhhhhcc-chhh----------hhcCCH
Confidence            99999999999999999999999999999999998 89999999999976 45443332 2221          124589


Q ss_pred             HHHHHHHHHhcCccCCcccccccccC
Q 024976          234 WDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+|++++||+|+. .++||+.|.+|
T Consensus       226 edvA~~v~~L~s~~-~~~tG~~i~vd  250 (613)
T 3oml_A          226 KLIAPVVAYLCHES-CEDNGSYIESA  250 (613)
T ss_dssp             GGTHHHHHHTTSTT-CCCCSCEEEEE
T ss_pred             HHHHHHHHHhcCCC-cCCCceEEEEC
Confidence            99999999999998 89999999876

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2.6e-42  Score=282.07  Aligned_cols=220  Identities=19%  Similarity=0.142  Sum_probs=191.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ....+|+++||||++|||++++++|+++|++|++++|+.+..+            -..+.+|++|.++++++++++.+.+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHc
Confidence            3456899999999999999999999999999999999876422            2357899999999999999999999


Q ss_pred             CCccEEEECCCCCCCCC-CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      |++|+||||||.....+ +.+.+.++|++.+++|+.+++.++++++|.|++.          |+||++||..+..+.+..
T Consensus        86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------g~iv~isS~~~~~~~~~~  155 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG----------GLFVLTGASAALNRTSGM  155 (251)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCGGGGSCCTTB
T ss_pred             CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC----------CEEEEEechhhccCCCCC
Confidence            99999999999876554 6778899999999999999999999999998653          889999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          167 IHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ..|++||+|++.|+++++.|++ .++||+||+|+||+++|++.          .......+.+++.+|+|+|+++++|++
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~----------~~~~~~~~~~~~~~~~dva~~i~~l~~  225 (251)
T 3orf_A          156 IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN----------RKYMSDANFDDWTPLSEVAEKLFEWST  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH----------HHHCTTSCGGGSBCHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch----------hhhcccccccccCCHHHHHHHHHHHhc
Confidence            9999999999999999999963 26899999999999997542          222333456778999999999999999


Q ss_pred             c-cCCcccccccccC
Q 024976          246 D-AAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~-~~~~~tG~~i~~D  259 (259)
                      + .+.++||+.|.++
T Consensus       226 ~~~~~~~tG~~i~v~  240 (251)
T 3orf_A          226 NSDSRPTNGSLVKFE  240 (251)
T ss_dssp             CGGGCCCTTCEEEEE
T ss_pred             CccccCCcceEEEEe
Confidence            9 9999999998763

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=2.3e-42  Score=280.65  Aligned_cols=221  Identities=14%  Similarity=0.021  Sum_probs=190.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-   87 (259)
                      +.++|+++||||++|||++++++|+++|++|++++|+.+..+          ....++.+|++|+++++++++++.+.+ 
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            356899999999999999999999999999999999876432          135678999999999999999999999 


Q ss_pred             -CCccEEEECCCCCCCCCC-CCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           88 -GKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        88 -g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                       |++|+||||||.....++ .+.+.++|++.+++|+.+++.++++++|.|++.          |+||++||..+..+.++
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~----------g~iv~isS~~~~~~~~~  143 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG----------GLLTLAGAKAALDGTPG  143 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCGGGGSCCTT
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC----------CEEEEECCHHHccCCCC
Confidence             799999999998777777 788899999999999999999999999998652          88999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          166 QIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      ...|++||+++++|+++++.|++ .++||+||+|+||+++|++.......          .+..++.+|+|+|+++++++
T Consensus       144 ~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~vA~~v~~l~  213 (241)
T 1dhr_A          144 MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLEFLVETFHDWI  213 (241)
T ss_dssp             BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc----------hhhccCCCHHHHHHHHHHHh
Confidence            99999999999999999999984 15799999999999997643211110          11233567999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.++||+.|.+|
T Consensus       214 ~~~~~~~~G~~~~v~  228 (241)
T 1dhr_A          214 TGNKRPNSGSLIQVV  228 (241)
T ss_dssp             TTTTCCCTTCEEEEE
T ss_pred             cCCCcCccceEEEEe
Confidence            999999999999876

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1e-42  Score=290.41  Aligned_cols=229  Identities=18%  Similarity=0.150  Sum_probs=184.5

Q ss_pred             CCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +..+++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++
T Consensus         8 ~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A            8 AADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             GGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             hhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc
Confidence            44557799999999999999999999999999999999999988777666554   557999999999999999998866


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-  162 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  162 (259)
                          +++|+||||||+..  +..+.+.++|++.+++|+.++++++++++|.|.+            +||++||..++.+ 
T Consensus        85 ----~~iD~lv~nAg~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~------------riv~isS~~~~~~~  146 (291)
T 3rd5_A           85 ----SGADVLINNAGIMA--VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD------------RVVTVSSMAHWPGR  146 (291)
T ss_dssp             ----CCEEEEEECCCCCS--CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE------------EEEEECCGGGTTCC
T ss_pred             ----CCCCEEEECCcCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------heeEeechhhccCC
Confidence                78999999999764  3356788899999999999999999999998753            5999999988755 


Q ss_pred             ------------CccchhhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEecccccCCcccCCCChHHHHHHhhhhccCC
Q 024976          163 ------------TWYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY  228 (259)
Q Consensus       163 ------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  228 (259)
                                  .++...|++||+|++.|+++++.|++ ++|  |+||+|+||+++|++.... . +.....+ ...+.+
T Consensus       147 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~g~~i~v~~v~PG~v~T~~~~~~-~-~~~~~~~-~~~~~~  222 (291)
T 3rd5_A          147 INLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLT-AAGSPLRALAAHPGYSHTNLQGAS-G-RKLGDAL-MSAATR  222 (291)
T ss_dssp             CCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECCSGGGSCC---------------------
T ss_pred             CCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHh-hCCCCEEEEEeeCCCCcccccccc-c-hHHHHHH-HHHHHH
Confidence                        35667899999999999999999998 777  9999999999998765432 1 1222222 224556


Q ss_pred             CCCC-HHHHHHHHHHhcCccCCcccccccccC
Q 024976          229 KFGE-KWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       229 ~~~~-~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +... |+|+|++++||+++  .++||+.|.+|
T Consensus       223 ~~~~~~~~~A~~~~~l~~~--~~~~G~~~~vd  252 (291)
T 3rd5_A          223 VVATDADFGARQTLYAASQ--DLPGDSFVGPR  252 (291)
T ss_dssp             --CHHHHHHHHHHHHHHHS--CCCTTCEEEET
T ss_pred             HHhCCHHHHHHHHHHHHcC--CCCCCceeCCc
Confidence            6665 99999999999998  48999999876

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-41  Score=276.82  Aligned_cols=224  Identities=16%  Similarity=0.186  Sum_probs=198.8

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence            34668999999999999999999999999999999999999888888888877777899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.        ++||++||..++.+.+.
T Consensus       105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~  176 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNH--------GHIVTVASAAGHVSVPF  176 (272)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCCC-CCCHHH
T ss_pred             HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEEechhhcCCCCC
Confidence            9999999999999877777888889999999999999999999999999987754        89999999999998888


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          166 QIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~--~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ...|+++|++++.|+++++.|++  .+.||+|++|+||+++|++...            ...+.+++.+|+|+|++++++
T Consensus       177 ~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~------------~~~~~~~~~~~~dva~~i~~~  244 (272)
T 1yb1_A          177 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN------------PSTSLGPTLEPEEVVNRLMHG  244 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC------------THHHHCCCCCHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc------------ccccccCCCCHHHHHHHHHHH
Confidence            99999999999999999999984  1468999999999999875321            112346788999999999999


Q ss_pred             cCccCC
Q 024976          244 ASDAAV  249 (259)
Q Consensus       244 ~s~~~~  249 (259)
                      +.....
T Consensus       245 ~~~~~~  250 (272)
T 1yb1_A          245 ILTEQK  250 (272)
T ss_dssp             HHTTCS
T ss_pred             HHcCCC
Confidence            876544

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-41  Score=273.21  Aligned_cols=226  Identities=17%  Similarity=0.161  Sum_probs=189.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++|+++||||++|||++++++|+++|  ++|++++|+.+.++.+.+.   .+.++.++.+|++|+++++++++++.+.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            357999999999999999999999999  9999999998776554322   25679999999999999999999999999


Q ss_pred             C--CccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhc------CCCCCCCCCCceEEEecccc
Q 024976           88 G--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG------GRGQASSSSGGIIINISATL  158 (259)
Q Consensus        88 g--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~~~~~~~g~iv~isS~~  158 (259)
                      |  ++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.++      +..   ....++||++||..
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~iv~isS~~  154 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQL---SVSRAAVITISSGL  154 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCC---CTTTCEEEEECCGG
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcc---cCCCcEEEEeccCc
Confidence            8  9999999999876 6788889999999999999999999999999999865      200   00138999999998


Q ss_pred             ccccC-------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCC
Q 024976          159 HYTAT-------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG  231 (259)
Q Consensus       159 ~~~~~-------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (259)
                      +..+.       ++...|++||++++.|+++++.|++ ++||++++|+||+++|++...                 .++.
T Consensus       155 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~  216 (250)
T 1yo6_A          155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPGWVQTNLGGK-----------------NAAL  216 (250)
T ss_dssp             GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECCCC----------------------------
T ss_pred             cccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEcCCceecCCCCC-----------------CCCC
Confidence            88776       5778999999999999999999998 889999999999999765321                 1356


Q ss_pred             CHHHHHHHHHHhcCccCCcccccccccC
Q 024976          232 EKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       232 ~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +|+|+|+.+++++++...+++|+.+.+|
T Consensus       217 ~~~~~a~~~~~~~~~~~~~~~G~~~~~~  244 (250)
T 1yo6_A          217 TVEQSTAELISSFNKLDNSHNGRFFMRN  244 (250)
T ss_dssp             --HHHHHHHHHHHTTCCGGGTTCEEETT
T ss_pred             CHHHHHHHHHHHHhcccccCCCeEEEEC
Confidence            8999999999999998889999998876

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-42  Score=276.14  Aligned_cols=220  Identities=18%  Similarity=0.099  Sum_probs=189.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc--
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~--   87 (259)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..+          ....++.+|++|+++++++++++.+.+  
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999999999999876532          135678999999999999999999999  


Q ss_pred             CCccEEEECCCCCCCCCC-CCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +++|+||||||.....++ .+.+.++|++.+++|+.+++.++++++|.|.+.          |+||++||..+..+.++.
T Consensus        71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------g~iv~isS~~~~~~~~~~  140 (236)
T 1ooe_A           71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG----------GLLQLTGAAAAMGPTPSM  140 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCGGGGSCCTTB
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC----------CEEEEECchhhccCCCCc
Confidence            799999999998777777 778889999999999999999999999998652          889999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH-Hhc
Q 024976          167 IHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL-YLA  244 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~l~  244 (259)
                      ..|++||+++++|+++++.|++ .++||+||+|+||+++|++......          ..+..++.+|+|+|++++ +|+
T Consensus       141 ~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~----------~~~~~~~~~~~dvA~~i~~~l~  210 (236)
T 1ooe_A          141 IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP----------NADHSSWTPLSFISEHLLKWTT  210 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST----------TCCGGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC----------CccccccCCHHHHHHHHHHHHc
Confidence            9999999999999999999984 2678999999999999764321110          011234678999999998 555


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      ++.+.++||+.|.+|
T Consensus       211 s~~~~~~~G~~~~v~  225 (236)
T 1ooe_A          211 ETSSRPSSGALLKIT  225 (236)
T ss_dssp             CGGGCCCTTCEEEEE
T ss_pred             CCCcccccccEEEEe
Confidence            999999999999875

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=9.3e-42  Score=288.76  Aligned_cols=236  Identities=20%  Similarity=0.205  Sum_probs=189.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh------cCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS------LGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~------~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.++...+.+..      .+.++.++.+|++|+++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            479999999999999999999999999988887765444333333321      23578999999999999999999873


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                        +|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.        |+||++||..+..+.+
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~--------g~IV~isS~~~~~~~~  150 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGS--------GRVLVTGSVGGLMGLP  150 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEEEEGGGTSCCT
T ss_pred             --cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEECCcccccCCC
Confidence              589999999999877778888999999999999999999999999999987654        9999999999999988


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh---------HHHHHHhhhh-----ccCCCC
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---------EEIRSKATDY-----MAAYKF  230 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~---------~~~~~~~~~~-----~~~~~~  230 (259)
                      ....|++||+++++|+++++.|++ ++||+||+|+||+++|++.......         ++....+...     .+.+|+
T Consensus       151 ~~~~Y~aSK~a~~~~~~~la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (327)
T 1jtv_A          151 FNDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREA  229 (327)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhc
Confidence            999999999999999999999998 8999999999999998765432211         1111111111     122343


Q ss_pred             -CCHHHHHHHHHHhcCc---cCCcccccccc
Q 024976          231 -GEKWDIAMAALYLASD---AAVHRDLIHLL  257 (259)
Q Consensus       231 -~~~~dva~~~~~l~s~---~~~~~tG~~i~  257 (259)
                       .+|+|+|++++++++.   ..+|++|+.+.
T Consensus       230 ~~~pedvA~~i~~l~~~~~~~~~~~tg~~~~  260 (327)
T 1jtv_A          230 AQNPEEVAEVFLTALRAPKPTLRYFTTERFL  260 (327)
T ss_dssp             CBCHHHHHHHHHHHHHCSSCCSEEESCSTTH
T ss_pred             CCCHHHHHHHHHHHHcCCCCCeEEEeCchHH
Confidence             4899999999999874   57899998763

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-40  Score=269.14  Aligned_cols=228  Identities=24%  Similarity=0.293  Sum_probs=194.0

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++||||++|||++++++|+++|++|++++|+.+ .           .++.++.+|++|+++++++++++ +.++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence            689999999999999999999999999999999865 1           23588999999999999999999 8889999


Q ss_pred             EEEECCCCCCCCCCCCCC----HHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           92 ILVNAAAGNFLVPAEDLS----PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ++|||||.....++.+.+    .++|++.+++|+.+++.+++++.+.|.+++...  ....++||++||..+..+.++..
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~  146 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDA--EGQRGVIVNTASVAAFEGQIGQA  146 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCT--TSCSEEEEEECCTHHHHCCTTCH
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC--CCCCeEEEEeCChhhccCCCCCc
Confidence            999999987666655544    449999999999999999999999998754100  00125999999999999988999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccC-CCCCCHHHHHHHHHHhcCc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~  246 (259)
                      .|++||++++.++++++.|++ ++||+++.|+||+++|++... .. +.....+....|. +++.+|+|+|+++++|+++
T Consensus       147 ~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  223 (242)
T 1uay_A          147 AYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQG-LP-EKAKASLAAQVPFPPRLGRPEEYAALVLHILEN  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHT-SC-HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeccCcchhhhc-cc-hhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence            999999999999999999998 889999999999999765432 22 3334445556677 8899999999999999987


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                        .+++|+.|.+|
T Consensus       224 --~~~~G~~~~v~  234 (242)
T 1uay_A          224 --PMLNGEVVRLD  234 (242)
T ss_dssp             --TTCCSCEEEES
T ss_pred             --CCCCCcEEEEc
Confidence              78999999886

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=4.1e-41  Score=275.38  Aligned_cols=229  Identities=21%  Similarity=0.185  Sum_probs=185.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCH-HHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKR-EDAVRVVESTI   84 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~-~~~~~~~~~~~   84 (259)
                      ++++|+++||||++|||++++++|+++|++ |++++|+.+.  +..+++.+.  +.++.++.+|++|+ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            478999999999999999999999999997 9999998642  222333222  44688999999998 99999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                      +.++++|+||||||..        +.++|++.+++|+.++++++++++|.|.+++..     .+|+||++||..++.+.+
T Consensus        80 ~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~  146 (254)
T 1sby_A           80 DQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGG-----PGGIIANICSVTGFNAIH  146 (254)
T ss_dssp             HHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCGGGTSCCT
T ss_pred             HhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCC-----CCCEEEEECchhhccCCC
Confidence            9999999999999963        456789999999999999999999999765310     128999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh---HHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      ....|++||++++.|+++++.+++ ++||+||+|+||+++|++.......   ...........|   +.+|+|+|++++
T Consensus       147 ~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dvA~~i~  222 (254)
T 1sby_A          147 QVPVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP---TQTSEQCGQNFV  222 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSC---CEEHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCC---CCCHHHHHHHHH
Confidence            999999999999999999999997 7899999999999998754321110   111111222223   348999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++   .+++|+.+.+|
T Consensus       223 ~~~~---~~~~G~~~~v~  237 (254)
T 1sby_A          223 KAIE---ANKNGAIWKLD  237 (254)
T ss_dssp             HHHH---HCCTTCEEEEE
T ss_pred             HHHH---cCCCCCEEEEe
Confidence            9995   57899988775

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=7e-40  Score=275.19  Aligned_cols=227  Identities=23%  Similarity=0.223  Sum_probs=185.9

Q ss_pred             CCCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCH-HHHHH
Q 024976            1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKR-EDAVR   78 (259)
Q Consensus         1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~-~~~~~   78 (259)
                      |....++.++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|+ +++++
T Consensus         1 m~~~~~~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~   80 (311)
T 3o26_A            1 MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSS   80 (311)
T ss_dssp             -----------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHH
T ss_pred             CCCCCCCccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHH
Confidence            555556667899999999999999999999999999999999999999999888887654 5799999999998 99999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCC------------------------------CCCCCCCHHHHHHHHhccchhHHHHH
Q 024976           79 VVESTINHFGKLDILVNAAAGNFL------------------------------VPAEDLSPNGFRTVIEIDSVGTFIMC  128 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~l~  128 (259)
                      +++.+.+.+|++|+||||||+...                              .++.+.+.++|++.+++|+.+++.++
T Consensus        81 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  160 (311)
T 3o26_A           81 LADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVT  160 (311)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHH
Confidence            999999999999999999997632                              24556788999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------------------------------------------cc
Q 024976          129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------------------------------------------WY  165 (259)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------~~  165 (259)
                      ++++|.|++++.        |+||++||..+..+.                                           +.
T Consensus       161 ~~~~~~l~~~~~--------~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (311)
T 3o26_A          161 EVLIPLLQLSDS--------PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSF  232 (311)
T ss_dssp             HHHHHHHTTSSS--------CEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSS
T ss_pred             HHhhHhhccCCC--------CeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCccc
Confidence            999999987654        899999999887653                                           35


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+++++.|++ +  |+||+|+||+|.|++....                 ...++++.++.+++++.
T Consensus       233 ~~~Y~~SK~a~~~~~~~la~e~~-~--i~v~~v~PG~v~T~~~~~~-----------------~~~~~~~~a~~~~~~~~  292 (311)
T 3o26_A          233 GAAYTTSKACLNAYTRVLANKIP-K--FQVNCVCPGLVKTEMNYGI-----------------GNYTAEEGAEHVVRIAL  292 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCT-T--SEEEEECCCSBCSGGGTTC-----------------CSBCHHHHHHHHHHHHT
T ss_pred             chhhHHHHHHHHHHHHHHHhhcC-C--ceEEEecCCceecCCcCCC-----------------CCCCHHHHHHHHHHHHh
Confidence            57899999999999999999986 4  9999999999997654321                 12478999999999877


Q ss_pred             ccCCcccccc
Q 024976          246 DAAVHRDLIH  255 (259)
Q Consensus       246 ~~~~~~tG~~  255 (259)
                      ......+|..
T Consensus       293 ~~~~~~~g~~  302 (311)
T 3o26_A          293 FPDDGPSGFF  302 (311)
T ss_dssp             CCSSCCCSCE
T ss_pred             CCCCCCCceE
Confidence            5555444443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=8.6e-40  Score=269.26  Aligned_cols=235  Identities=17%  Similarity=0.114  Sum_probs=196.5

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcC---CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHG---AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G---~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      +..++++|+++||||++|||++++++|+++|   ++|++++|+.+..+.+ +++...+.++.++.+|++|.+++++++++
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   93 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVAD   93 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHH
Confidence            3456899999999999999999999999999   9999999997765543 44444456799999999999999999999


Q ss_pred             HHHHcC--CccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCC---CCCCCCCceEEEecc
Q 024976           83 TINHFG--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINISA  156 (259)
Q Consensus        83 ~~~~~g--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~g~iv~isS  156 (259)
                      +.+.++  ++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.++...   .......++||++||
T Consensus        94 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS  173 (267)
T 1sny_A           94 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS  173 (267)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred             HHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEec
Confidence            999998  8999999999876 6777888999999999999999999999999999875100   000001289999999


Q ss_pred             ccccccCc---cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCH
Q 024976          157 TLHYTATW---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       157 ~~~~~~~~---~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (259)
                      ..+..+.+   +...|+++|++++.|+++++.|++ ++||++++|+||+++|++...                 .+..+|
T Consensus       174 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~  235 (267)
T 1sny_A          174 ILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLY-PQRIMCVSLHPGWVKTDMGGS-----------------SAPLDV  235 (267)
T ss_dssp             GGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCSBCSTTTCT-----------------TCSBCH
T ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEeCCcceecCCCCC-----------------CCCCCH
Confidence            98877653   677899999999999999999998 889999999999999765421                 135689


Q ss_pred             HHHHHHHHHhcCccCCcccccccccC
Q 024976          234 WDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++|+.+++++++...+++|+.|.+|
T Consensus       236 ~~~a~~~~~~~~~~~~~~~G~~~~~~  261 (267)
T 1sny_A          236 PTSTGQIVQTISKLGEKQNGGFVNYD  261 (267)
T ss_dssp             HHHHHHHHHHHHHCCGGGTTCEECTT
T ss_pred             HHHHHHHHHHHHhcCcCCCCcEEccC
Confidence            99999999999988899999988765

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1.6e-40  Score=286.83  Aligned_cols=237  Identities=14%  Similarity=0.031  Sum_probs=195.0

Q ss_pred             CCCcEEEEeCCccchHHH--HHHHHHHcCCeEEEEeCChhh------------HHHHHHHHHhcCCCeEEEEcCCCCHHH
Q 024976           10 LKGKVALLTGGGSGIGFE--ISLQLGKHGAAIAIMGRRKTV------------LRSAVAALHSLGIPAIGLEGDVRKRED   75 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~--~a~~l~~~G~~vv~~~r~~~~------------~~~~~~~~~~~~~~v~~~~~Dl~~~~~   75 (259)
                      ..+|+++||||++|||++  +++.|+++|++|++++|+...            .+...+.+...+.++.++.+|++|+++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            679999999999999999  999999999999999987543            244455556667789999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHhccc
Q 024976           76 AVRVVESTINHFGKLDILVNAAAGN-------------FLVPA---------------------EDLSPNGFRTVIEIDS  121 (259)
Q Consensus        76 ~~~~~~~~~~~~g~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~  121 (259)
                      ++++++++.+.+|++|+||||||..             ..+++                     .+.+.++|++.+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            9999999999999999999999974             23333                     3568999999999999


Q ss_pred             hhHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc--hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEE
Q 024976          122 VGTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTD-YAIRVNG  197 (259)
Q Consensus       122 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~  197 (259)
                      .+.+ .+++++.+.+....        +|+||++||..+..+.+.+  ..|++||+|+++|+|+|+.|++ + +|||||+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~--------gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa-~~~GIrVN~  288 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSD--------KATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLN-RVIGGRAFV  288 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEE--------EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH-HHHSCEEEE
T ss_pred             HHHHHHHHHHHHHHhhhcC--------CcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC-CccCeEEEE
Confidence            9988 77888776544332        3899999999999988888  9999999999999999999999 8 8999999


Q ss_pred             EecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          198 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       198 i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |+||++.|++.......+.....+.  .+++|.+++||+++.+.||+++  .+.+|+.|.+|
T Consensus       289 V~PG~v~T~~s~~ip~~p~y~~~~~--~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D  346 (418)
T 4eue_A          289 SVNKALVTKASAYIPTFPLYAAILY--KVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFD  346 (418)
T ss_dssp             EECCCCCCHHHHTSTTHHHHHHHHH--HHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCC
T ss_pred             EECCcCcChhhhcCCCCcHHHHHHH--HHHhhcCChHHHHHHHHHHhhc--cccCCCccccC
Confidence            9999999765433322222222222  2566789999999999999988  56688887776

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=8.6e-41  Score=272.06  Aligned_cols=217  Identities=20%  Similarity=0.226  Sum_probs=158.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++||||++|||++++++|++ |++|++++|+.+.++...+     ..++.++.+|+++.++ .+.+.+..+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   74 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNLD   74 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhcC
Confidence            57899999999999999999999988 9999999999877665443     2358899999999877 555555566788


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++         |+||++||..+..+.++...
T Consensus        75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~~~~  145 (245)
T 3e9n_A           75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS---------GCVIYINSGAGNGPHPGNTI  145 (245)
T ss_dssp             CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEEC----------CHH
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC---------CeEEEEcCcccccCCCCchH
Confidence            999999999988888888899999999999999999999999999998753         88999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||+|++.|+++++.|++ ++||+||+|+||++.|++......      ......+.+++.+|+|+|++++||++...
T Consensus       146 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          146 YAASKHALRGLADAFRKEEA-NNGIRVSTVSPGPTNTPMLQGLMD------SQGTNFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCCccCchhhhhhh------hhhcccccccCCCHHHHHHHHHHHHcCCC
Confidence            99999999999999999998 889999999999999875433221      11223455678899999999999998654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=6.2e-41  Score=274.59  Aligned_cols=214  Identities=20%  Similarity=0.208  Sum_probs=170.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||++|||++++++|+++|++|++++|+.++++.            . +.+|++|.++++++++++   ++++|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~---~~~id~   65 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC---SKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh---CCCCCE
Confidence            689999999999999999999999999999998764321            1 678999999999888743   389999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc------------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY------------  160 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------  160 (259)
                      ||||||.....       +.|++.+++|+.+++.++++++|.|++++.        |+||++||..++            
T Consensus        66 lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~~~~~  130 (257)
T 1fjh_A           66 LVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQ--------PAAVVISSVASAHLAFDKNPLALA  130 (257)
T ss_dssp             EEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSS--------CEEEEECCGGGGSSCGGGCTTHHH
T ss_pred             EEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCC--------cEEEEECChhhhccccccchhhhh
Confidence            99999975411       238999999999999999999999987654        899999999888            


Q ss_pred             ----------------ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhh-
Q 024976          161 ----------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD-  223 (259)
Q Consensus       161 ----------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-  223 (259)
                                      .+.+....|++||++++.|+++++.|++ ++||+||+|+||++.|++........ ....... 
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~  208 (257)
T 1fjh_A          131 LEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQDP-RYGESIAK  208 (257)
T ss_dssp             HHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC----------------------
T ss_pred             hcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCccchhhccch-hHHHHHHh
Confidence                            4555778999999999999999999998 88999999999999987654321211 1111222 


Q ss_pred             -hccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          224 -YMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       224 -~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                       ..|.+|+.+|+|+|++++||+++.+.++||+.|.+|
T Consensus       209 ~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vd  245 (257)
T 1fjh_A          209 FVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVID  245 (257)
T ss_dssp             CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             cccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEEC
Confidence             457788999999999999999999999999999887

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.8e-39  Score=268.05  Aligned_cols=219  Identities=23%  Similarity=0.272  Sum_probs=189.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHH-cCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .++|+++||||++|||++++++|++ +|++|++++|+.+..++..+++...+.++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999 999999999998888888888877677899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCC-HHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 024976           89 KLDILVNAAAGNFLVPAEDLS-PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----  163 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  163 (259)
                      ++|+||||||...... .+.+ .+++++.+++|+.+++++++++++.|++.          |+||++||..++.+.    
T Consensus        82 ~id~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------g~iv~~sS~~~~~~~~~~~  150 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ----------GRVVNVSSIMSVRALKSCS  150 (276)
T ss_dssp             SEEEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEECCHHHHHHHHTSC
T ss_pred             CCCEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC----------CEEEEECChhhhcccccCC
Confidence            9999999999765443 3334 58899999999999999999999988652          789999998776320    


Q ss_pred             -------------------------------------ccchhhHHHHHHHHHHHHHHHHHhcCC----CCeEEEEEeccc
Q 024976          164 -------------------------------------WYQIHVSAAKAAVDSITRSLALEWGTD----YAIRVNGIAPGP  202 (259)
Q Consensus       164 -------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~----~gi~v~~i~pg~  202 (259)
                                                           .+...|++||++++.|++.++.+++ +    .||+|++|+||+
T Consensus       151 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~~~~~i~v~~v~PG~  229 (276)
T 1wma_A          151 PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLS-EQRKGDKILLNACCPGW  229 (276)
T ss_dssp             HHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHH-HHCTTSCCEEEEEECCS
T ss_pred             hhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhh-cccCCCceEEEEecCCc
Confidence                                                 1237899999999999999999997 6    799999999999


Q ss_pred             ccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc--CCcccccccc
Q 024976          203 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA--AVHRDLIHLL  257 (259)
Q Consensus       203 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~--~~~~tG~~i~  257 (259)
                      +.|++...                 .++.+|+|+|+.++||++..  +.+++|+.|.
T Consensus       230 v~t~~~~~-----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          230 VRTDMAGP-----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             BCSTTTCT-----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             cccCcCCc-----------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            99765431                 24679999999999999854  4799999875

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=5.1e-38  Score=261.33  Aligned_cols=218  Identities=22%  Similarity=0.275  Sum_probs=187.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC-CeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+. ++.++.+|++|.++++++++++.+.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999999988888887765543 6889999999999999999999999


Q ss_pred             cCCccEEEEC-CCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           87 FGKLDILVNA-AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        87 ~g~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      +|++|+|||| +|.. ..++.+.+.++|++.+++|+.+++.++++++|.|.++.         |+||++||..+..+.++
T Consensus       104 ~g~iD~li~naag~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~  173 (286)
T 1xu9_A          104 MGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN---------GSIVVVSSLAGKVAYPM  173 (286)
T ss_dssp             HTSCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEEEEGGGTSCCTT
T ss_pred             cCCCCEEEECCccCC-CCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC---------CEEEEECCcccccCCCC
Confidence            9999999999 4654 34555678999999999999999999999999987642         89999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHh--cCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          166 QIHVSAAKAAVDSITRSLALEW--GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~--~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      ...|++||++++.|+++++.|+  . ..||+++.|+||+++|++......         .. ......+|+|+|+.++..
T Consensus       174 ~~~Y~asK~a~~~~~~~l~~e~~~~-~~~i~v~~v~Pg~v~t~~~~~~~~---------~~-~~~~~~~~~~vA~~i~~~  242 (286)
T 1xu9_A          174 VAAYSASKFALDGFFSSIRKEYSVS-RVNVSITLCVLGLIDTETAMKAVS---------GI-VHMQAAPKEECALEIIKG  242 (286)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEECCBCCHHHHHHSC---------GG-GGGGCBCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEeecCccCChhHHHhcc---------cc-ccCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999  5 789999999999999764321111         00 112356899999999988


Q ss_pred             cCc
Q 024976          244 ASD  246 (259)
Q Consensus       244 ~s~  246 (259)
                      +..
T Consensus       243 ~~~  245 (286)
T 1xu9_A          243 GAL  245 (286)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            754

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-38  Score=300.86  Aligned_cols=236  Identities=17%  Similarity=0.184  Sum_probs=196.2

Q ss_pred             CCCCCcEEEEeCCccc-hHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHh----cCCCeEEEEcCCCCHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus         8 ~~l~~k~~lItGa~~g-iG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      +++++|++|||||++| ||++++++|+++|++|+++ +|+.+.+++..+++..    .+.++.++.+|++|+++++++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            4588999999999998 9999999999999999988 6766666666666632    25578999999999999999999


Q ss_pred             HHHHH-----cC-CccEEEECCCCCCCC-CCCCCC--HHHHHHHHhccchhHHHHHHHH--HHHHHhcCCCCCCCCCCce
Q 024976           82 STINH-----FG-KLDILVNAAAGNFLV-PAEDLS--PNGFRTVIEIDSVGTFIMCHEA--LKYLKKGGRGQASSSSGGI  150 (259)
Q Consensus        82 ~~~~~-----~g-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~~~g~  150 (259)
                      ++.+.     +| ++|+||||||+.... ++.+.+  .++|++.+++|+.+++.+++++  +|.|.+++.        |+
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krgg--------Gr  623 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPA--------QV  623 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCE--------EE
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCC--------CE
Confidence            99988     77 999999999987777 788888  8999999999999999999999  777776543        89


Q ss_pred             EEEeccccccccCccchhhHHHHHHHHHH-HHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCC
Q 024976          151 IINISATLHYTATWYQIHVSAAKAAVDSI-TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK  229 (259)
Q Consensus       151 iv~isS~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  229 (259)
                      ||++||..+..+  +...|++||+|+++| .+.++.+++ +. |+||+|+||++.|+.+....   +.........+. |
T Consensus       624 IVnISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla-~~-IRVNaVaPG~V~TT~M~~~~---e~~~~~l~~ipl-R  695 (1688)
T 2pff_A          624 ILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWA-NQ-LTVCGAIIGWTRGTGLMSAN---NIIAEGIEKMGV-R  695 (1688)
T ss_dssp             CCCCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCT-TT-EECCCCCCCCCCCCSSSCTT---TTCSTTTSSSSC-C
T ss_pred             EEEEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEEEECcCcCCcccCCc---hHHHHHHHhCCC-C
Confidence            999999988877  577899999999999 788888887 66 99999999999943332221   111112223343 5


Q ss_pred             CCCHHHHHHHHHHhcCcc-CCcccccccccC
Q 024976          230 FGEKWDIAMAALYLASDA-AVHRDLIHLLDD  259 (259)
Q Consensus       230 ~~~~~dva~~~~~l~s~~-~~~~tG~~i~~D  259 (259)
                      ..+|+|+|++++||+|+. +.++||+.|.+|
T Consensus       696 ~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VD  726 (1688)
T 2pff_A          696 TFSQKEMAFNLLGLLTPEVVELCQKSPVMAD  726 (1688)
T ss_dssp             CCCCCTTHHHHHHHTSTTHHHHHTTSCCCCC
T ss_pred             CCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence            679999999999999998 789999999875

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=9e-38  Score=303.98  Aligned_cols=235  Identities=16%  Similarity=0.169  Sum_probs=195.1

Q ss_pred             CCCCCcEEEEeCCccc-hHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHh----cCCCeEEEEcCCCCHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus         8 ~~l~~k~~lItGa~~g-iG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ++++||++|||||++| ||++++++|+++|++|+++ +|+.+.+++..+++..    .+.++.++.||++|.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4588999999999998 9999999999999999998 5777777666666532    25678999999999999999999


Q ss_pred             HHHHH-----cC-CccEEEECCCCCCCC-CCCCCC--HHHHHHHHhccchhHHHHHHHH--HHHHHhcCCCCCCCCCCce
Q 024976           82 STINH-----FG-KLDILVNAAAGNFLV-PAEDLS--PNGFRTVIEIDSVGTFIMCHEA--LKYLKKGGRGQASSSSGGI  150 (259)
Q Consensus        82 ~~~~~-----~g-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~~~g~  150 (259)
                      ++.+.     +| ++|+||||||+...+ ++.+.+  .++|++.+++|+.+++.+++++  +|.|.+++        +|+
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~--------~G~  822 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP--------AQV  822 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC--------EEE
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC--------CCE
Confidence            99988     66 999999999987777 888888  8999999999999999999988  67776554        389


Q ss_pred             EEEeccccccccCccchhhHHHHHHHHHH-HHHHHHHhcCCCCeEEEEEeccccc-CCcccCCCChHHHHHHhhhhccCC
Q 024976          151 IINISATLHYTATWYQIHVSAAKAAVDSI-TRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAY  228 (259)
Q Consensus       151 iv~isS~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~e~~~~~gi~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~  228 (259)
                      ||++||..+..+  +...|++||+|+.+| ++.++.+++ ++ |+||+|+||++. |++....-.    ........+. 
T Consensus       823 IVnISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela-~~-IrVNaV~PG~V~tT~m~~~~~~----~~~~~~~~pl-  893 (1887)
T 2uv8_A          823 ILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWA-NQ-LTVCGAIIGWTRGTGLMSANNI----IAEGIEKMGV-  893 (1887)
T ss_dssp             EEEECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCT-TT-EEEEEEEECCEECC-----CCT----THHHHHTTSC-
T ss_pred             EEEEcChHhccC--CCchHHHHHHHHHHHHHHHHHHHhC-CC-eEEEEEEecccccccccccchh----HHHHHHhcCC-
Confidence            999999998877  577899999999999 999999997 66 999999999999 554322111    1112223344 


Q ss_pred             CCCCHHHHHHHHHHhcCcc-CCcccccccccC
Q 024976          229 KFGEKWDIAMAALYLASDA-AVHRDLIHLLDD  259 (259)
Q Consensus       229 ~~~~~~dva~~~~~l~s~~-~~~~tG~~i~~D  259 (259)
                      |..+|+|+|++++||+|+. +.|+||+.|.+|
T Consensus       894 r~~sPEEVA~avlfLaSd~~as~iTGq~I~VD  925 (1887)
T 2uv8_A          894 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMAD  925 (1887)
T ss_dssp             CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEE
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence            6679999999999999998 789999999864

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.4e-36  Score=295.11  Aligned_cols=235  Identities=17%  Similarity=0.183  Sum_probs=194.3

Q ss_pred             CCCCCcEEEEeCCccc-hHHHHHHHHHHcCCeEEEEe-CChhhHHHHHHHHH----hcCCCeEEEEcCCCCHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALH----SLGIPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus         8 ~~l~~k~~lItGa~~g-iG~~~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ++++||++|||||++| ||++++++|+++|++|++++ |+.+.+++..+++.    ..+.++.++.||++|.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            3588999999999999 99999999999999999985 55666655555442    235679999999999999999999


Q ss_pred             HHHHH---cC-CccEEEECCCCCCCC-CCCCCC--HHHHHHHHhccchhHHHHHHH--HHHHHHhcCCCCCCCCCCceEE
Q 024976           82 STINH---FG-KLDILVNAAAGNFLV-PAEDLS--PNGFRTVIEIDSVGTFIMCHE--ALKYLKKGGRGQASSSSGGIII  152 (259)
Q Consensus        82 ~~~~~---~g-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~~~~~~~~g~iv  152 (259)
                      ++.+.   +| ++|+||||||+...+ ++.+.+  .++|++.+++|+.+++.++++  +++.|.+++        .|+||
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~--------~G~IV  799 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP--------AQVIL  799 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC--------EEECC
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC--------CCEEE
Confidence            99988   89 999999999987776 888888  899999999999999999987  677776554        28999


Q ss_pred             EeccccccccCccchhhHHHHHHHHHHHHHHHH-HhcCCCCeEEEEEeccccc-CCcccCCCChHHHHHHhhhhccCCCC
Q 024976          153 NISATLHYTATWYQIHVSAAKAAVDSITRSLAL-EWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKF  230 (259)
Q Consensus       153 ~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~-e~~~~~gi~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~  230 (259)
                      ++||..+..+  ....|++||+|+++|++.++. +++ +. |+||+|+||++. |++...    .+.........+. |.
T Consensus       800 nISS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla-~~-IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~~pl-r~  870 (1878)
T 2uv9_A          800 PLSPNHGTFG--NDGLYSESKLALETLFNRWYSESWG-NY-LTICGAVIGWTRGTGLMSA----NNLVAEGVEKLGV-RT  870 (1878)
T ss_dssp             EECSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTT-TT-EEEEEEEECCBCCTTSCSH----HHHTHHHHHTTTC-CC
T ss_pred             EEcchhhccC--CchHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEEEecceecCccccc----chhhHHHHHhcCC-CC
Confidence            9999998877  467899999999999987665 476 55 999999999998 765432    1122222233443 56


Q ss_pred             CCHHHHHHHHHHhcCccC-CcccccccccC
Q 024976          231 GEKWDIAMAALYLASDAA-VHRDLIHLLDD  259 (259)
Q Consensus       231 ~~~~dva~~~~~l~s~~~-~~~tG~~i~~D  259 (259)
                      .+|+|+|++++||+|+.+ .|+||+.|.+|
T Consensus       871 ~sPeEVA~avlfLaSd~a~s~iTGq~I~VD  900 (1878)
T 2uv9_A          871 FSQQEMAFNLLGLMAPAIVNLCQSDPVFAD  900 (1878)
T ss_dssp             BCHHHHHHHHHHHHSHHHHHHHTTSCEEEE
T ss_pred             CCHHHHHHHHHHHhCCcccccccCcEEEEE
Confidence            699999999999999987 89999998864

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=3.1e-36  Score=238.05  Aligned_cols=198  Identities=18%  Similarity=0.210  Sum_probs=174.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||++|||++++++|+ +|++|++++|+.+                 ++.+|++|+++++++++++    +++|+|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~d~v   62 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKVDAI   62 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence            79999999999999999999 9999999999864                 4789999999999998764    789999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK  173 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  173 (259)
                      |||||.....++.+.+.++|++.+++|+.+++.+++++.+.|.+.          ++||++||..+..+.++...|+++|
T Consensus        63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------~~iv~~sS~~~~~~~~~~~~Y~~sK  132 (202)
T 3d7l_A           63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK----------GSFTLTTGIMMEDPIVQGASAAMAN  132 (202)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE----------EEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC----------CEEEEEcchhhcCCCCccHHHHHHH
Confidence            999998777778888999999999999999999999999988542          7899999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccc
Q 024976          174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDL  253 (259)
Q Consensus       174 ~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG  253 (259)
                      ++++.+++.++.|+  ++||+++.|+||++.|++.           ...+..+..++.+++|+|+++++++   ..+++|
T Consensus       133 ~~~~~~~~~~~~e~--~~gi~v~~v~pg~v~~~~~-----------~~~~~~~~~~~~~~~dva~~~~~~~---~~~~~G  196 (202)
T 3d7l_A          133 GAVTAFAKSAAIEM--PRGIRINTVSPNVLEESWD-----------KLEPFFEGFLPVPAAKVARAFEKSV---FGAQTG  196 (202)
T ss_dssp             HHHHHHHHHHTTSC--STTCEEEEEEECCBGGGHH-----------HHGGGSTTCCCBCHHHHHHHHHHHH---HSCCCS
T ss_pred             HHHHHHHHHHHHHc--cCCeEEEEEecCccCCchh-----------hhhhhccccCCCCHHHHHHHHHHhh---hccccC
Confidence            99999999999987  4689999999999987542           1123345567889999999999888   357899


Q ss_pred             cccccC
Q 024976          254 IHLLDD  259 (259)
Q Consensus       254 ~~i~~D  259 (259)
                      +.+.+|
T Consensus       197 ~~~~vd  202 (202)
T 3d7l_A          197 ESYQVY  202 (202)
T ss_dssp             CEEEEC
T ss_pred             ceEecC
Confidence            999887

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=2.4e-35  Score=233.70  Aligned_cols=201  Identities=16%  Similarity=0.107  Sum_probs=171.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||++|||++++++|+++  +|++++|+.++++...+++..     .++.+|++|++++++++++    ++++|+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~~~id~   69 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----AGPLDL   69 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----HCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----cCCCCE
Confidence            58999999999999999999999  999999998877776666531     7889999999999999886    689999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      ||||||.....++.+.+.++|++.+++|+.+++++++++    .+++        .++||++||..++.+.++...|+++
T Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~s  137 (207)
T 2yut_A           70 LVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK--------GARAVFFGAYPRYVQVPGFAAYAAA  137 (207)
T ss_dssp             EEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE--------EEEEEEECCCHHHHSSTTBHHHHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC--------CcEEEEEcChhhccCCCCcchHHHH
Confidence            999999877778888899999999999999999999998    2332        2899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       173 K~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      |++++.++++++.|++ ++||+++.|+||.+.|++...            ...+.+++.+++|+|++++++++....
T Consensus       138 K~a~~~~~~~~~~~~~-~~gi~v~~v~pg~v~t~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          138 KGALEAYLEAARKELL-REGVHLVLVRLPAVATGLWAP------------LGGPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHHHHHHHHH-TTTCEEEEECCCCBCSGGGGG------------GTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHHHHHHHHHHHHHh-hhCCEEEEEecCcccCCCccc------------cCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            9999999999999998 899999999999998765211            123457789999999999999986543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=2.9e-35  Score=240.23  Aligned_cols=214  Identities=19%  Similarity=0.238  Sum_probs=174.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||+||||++++++|+++|++|++++|+.+.++.             .+.+|+++.++++++++++   .+++|+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d~   65 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLDG   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence            589999999999999999999999999999998654211             1678999999999888754   378999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------  163 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  163 (259)
                      ||||||....       .++|+..+++|+.+++++++++.+.|.+++.        ++||++||..++.+.         
T Consensus        66 vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~~~~~  130 (255)
T 2dkn_A           66 LVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQ--------PAAVIVGSIAATQPGAAELPMVEA  130 (255)
T ss_dssp             EEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSS--------CEEEEECCGGGGSTTGGGCHHHHH
T ss_pred             EEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCC--------ceEEEEeccccccccccccchhhh
Confidence            9999996431       1347899999999999999999999987654        899999999887654         


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhc-
Q 024976          164 -----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM-  225 (259)
Q Consensus       164 -----------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-  225 (259)
                                       ++...|+.||++++.+++.++.+++ +.||+++.|+||.+.|+....... ........... 
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~pg~v~~~~~~~~~~-~~~~~~~~~~~~  208 (255)
T 2dkn_A          131 MLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWA-GRGVRLNVVAPGAVETPLLQASKA-DPRYGESTRRFV  208 (255)
T ss_dssp             HHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECCBCSHHHHHHHH-CTTTHHHHHSCC
T ss_pred             hcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEcCCcccchhhhhccc-chhhHHHHHHHH
Confidence                             4667899999999999999999997 789999999999999764321100 00011111122 


Q ss_pred             -cCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          226 -AAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       226 -~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                       +.+++.+++|+|+++++++++.+.+++|+.+.+|
T Consensus       209 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  243 (255)
T 2dkn_A          209 APLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVD  243 (255)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEec
Confidence             6678999999999999999988889999988775

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=1.9e-34  Score=257.34  Aligned_cols=224  Identities=15%  Similarity=0.101  Sum_probs=185.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEE-eCC-------------hhhHHHHHHHHHhcCCCeEEEEcCCCCHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIM-GRR-------------KTVLRSAVAALHSLGIPAIGLEGDVRKRE   74 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~-~r~-------------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   74 (259)
                      -.++++|||||++|||++++++|+++|++ |+++ +|+             .+.++++.+++...+.++.++.||++|.+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            46899999999999999999999999997 7777 888             34566777888777888999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 024976           75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI  154 (259)
Q Consensus        75 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i  154 (259)
                      +++++++++. .++++|+||||||+...+++.+.+.++|++.+++|+.|++++.+++.+.+++++.       .++||++
T Consensus       329 ~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~-------~~~iV~~  400 (525)
T 3qp9_A          329 AAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGR-------PPVLVLF  400 (525)
T ss_dssp             HHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----C-------CCEEEEE
T ss_pred             HHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCC-------CCEEEEE
Confidence            9999999988 7899999999999988889999999999999999999999999999999876541       2889999


Q ss_pred             ccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHH
Q 024976          155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW  234 (259)
Q Consensus       155 sS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (259)
                      ||..+..+.+++..|+++|+++++|+    .+++ ..||++++|+||+++|++....    .....+..  ...+..+|+
T Consensus       401 SS~a~~~g~~g~~~YaaaKa~l~~lA----~~~~-~~gi~v~sI~pG~~~tgm~~~~----~~~~~~~~--~g~~~l~pe  469 (525)
T 3qp9_A          401 SSVAAIWGGAGQGAYAAGTAFLDALA----GQHR-ADGPTVTSVAWSPWEGSRVTEG----ATGERLRR--LGLRPLAPA  469 (525)
T ss_dssp             EEGGGTTCCTTCHHHHHHHHHHHHHH----TSCC-SSCCEEEEEEECCBTTSGGGSS----HHHHHHHH--TTBCCBCHH
T ss_pred             CCHHHcCCCCCCHHHHHHHHHHHHHH----HHHH-hCCCCEEEEECCccccccccch----hhHHHHHh--cCCCCCCHH
Confidence            99999999999999999999998874    5666 7899999999999986654321    11111211  122457899


Q ss_pred             HHHHHHHHhcCccCCccc
Q 024976          235 DIAMAALYLASDAAVHRD  252 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~t  252 (259)
                      ++++++.++++.....+.
T Consensus       470 e~a~~l~~~l~~~~~~v~  487 (525)
T 3qp9_A          470 TALTALDTALGHGDTAVT  487 (525)
T ss_dssp             HHHHHHHHHHHHTCSEEE
T ss_pred             HHHHHHHHHHhCCCCeEE
Confidence            999999999987655544

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=100.00  E-value=7.1e-33  Score=280.85  Aligned_cols=239  Identities=14%  Similarity=0.052  Sum_probs=179.6

Q ss_pred             CCCCcEEEEeCCccc-hHHHHHHHHHHcCCeEEEEeCChhh-----HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         9 ~l~~k~~lItGa~~g-iG~~~a~~l~~~G~~vv~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      .++||+++||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...+.++..+.+|++|++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            489999999999999 9999999999999999999998776     5666666665567789999999999999999999


Q ss_pred             HHH----HcCCccEEEECCCC----CCC-CCCCCCCHHHH----HHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 024976           83 TIN----HFGKLDILVNAAAG----NFL-VPAEDLSPNGF----RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG  149 (259)
Q Consensus        83 ~~~----~~g~id~li~~ag~----~~~-~~~~~~~~~~~----~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g  149 (259)
                      +.+    .||++|+||||||+    ... ....+.+.++|    +..+++|+.+++.+++++.+.|.+++....    .+
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~----~~ 2288 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASR----LH 2288 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCC----EE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCce----eE
Confidence            998    89999999999997    211 22333344444    455999999999999999999987653110    12


Q ss_pred             eEEEeccccccccCccchhhHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccC
Q 024976          150 IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA  227 (259)
Q Consensus       150 ~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e--~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  227 (259)
                      .++..|+..+..  +....|++||+|+.+|+|+|+.|  ++  .+|+||+++||++.++.+......   ........+.
T Consensus      2289 ii~~~ss~~g~~--g~~~aYsASKaAl~~LtrslA~E~~~a--~~IrVn~v~PG~v~tT~l~~~~~~---~~~~~~~~~~ 2361 (3089)
T 3zen_D         2289 VVLPGSPNRGMF--GGDGAYGEAKSALDALENRWSAEKSWA--ERVSLAHALIGWTKGTGLMGQNDA---IVSAVEEAGV 2361 (3089)
T ss_dssp             EEEEECSSTTSC--SSCSSHHHHGGGHHHHHHHHHHCSTTT--TTEEEEEEECCCEECSTTTTTTTT---THHHHGGGSC
T ss_pred             EEEECCcccccC--CCchHHHHHHHHHHHHHHHHHhccccC--CCeEEEEEeecccCCCcccccchh---HHHHHHhcCC
Confidence            333444443332  34568999999999999999999  65  469999999999985443322111   1112223343


Q ss_pred             CCCCCHHHHHHHHHHhcCccCCcccc-cccccC
Q 024976          228 YKFGEKWDIAMAALYLASDAAVHRDL-IHLLDD  259 (259)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~~~~~~tG-~~i~~D  259 (259)
                      ++ .+|+|||++++||+|+.+.++++ +.|.+|
T Consensus      2362 r~-~~PeEIA~avlfLaS~~a~~~~~~~p~~vd 2393 (3089)
T 3zen_D         2362 TT-YTTDEMAAMLLDLCTVETKVAAAGAPVKVD 2393 (3089)
T ss_dssp             BC-EEHHHHHHHHHHTTSHHHHHHHHHSCEEEE
T ss_pred             CC-CCHHHHHHHHHHHhChhhhhHhcCCeEEEE
Confidence            43 49999999999999998766544 445443

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.98  E-value=6.7e-32  Score=238.57  Aligned_cols=215  Identities=16%  Similarity=0.141  Sum_probs=176.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh---hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +|++|||||++|||++++++|+++|+ +|++++|+.   +..+++.+++...+.++.++.||++|.++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            59999999999999999999999999 688999863   3467778888888889999999999999999999988776 


Q ss_pred             CCccEEEECCCCC-CCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +++|+||||||+. ...++.+.+.++|++.+++|+.+++++.+++.+.    .        .++||++||..+..+.+++
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~--------~~~iV~~SS~a~~~g~~g~  385 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----D--------LDAFVLFSSGAAVWGSGGQ  385 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----C--------CSEEEEEEEHHHHTTCTTC
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----C--------CCEEEEEeChHhcCCCCCc
Confidence            7899999999987 6788999999999999999999999998877543    2        2789999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+++|+++++|++.+    . ..||++++|+||++.++.+....   ...+.+...  .....+|++.++++.+++..
T Consensus       386 ~~YaAaKa~ldala~~~----~-~~Gi~v~sV~pG~w~~~gm~~~~---~~~~~l~~~--g~~~l~pe~~~~~l~~~l~~  455 (496)
T 3mje_A          386 PGYAAANAYLDALAEHR----R-SLGLTASSVAWGTWGEVGMATDP---EVHDRLVRQ--GVLAMEPEHALGALDQMLEN  455 (496)
T ss_dssp             HHHHHHHHHHHHHHHHH----H-HTTCCCEEEEECEESSSCC---------CHHHHHT--TEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH----H-hcCCeEEEEECCcccCCccccCh---HHHHHHHhc--CCCCCCHHHHHHHHHHHHcC
Confidence            99999999999888744    4 56899999999999866554321   111111111  11235899999999998875


Q ss_pred             cCC
Q 024976          247 AAV  249 (259)
Q Consensus       247 ~~~  249 (259)
                      ...
T Consensus       456 ~~~  458 (496)
T 3mje_A          456 DDT  458 (496)
T ss_dssp             TCS
T ss_pred             CCc
Confidence            443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=1.5e-31  Score=248.89  Aligned_cols=215  Identities=19%  Similarity=0.134  Sum_probs=177.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHH-HcCCe-EEEEeCC---hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLG-KHGAA-IAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~-~~G~~-vv~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .+|+++||||++|||++++++|+ ++|++ |++++|+   .+..++..+++...+.++.++.||++|+++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            68999999999999999999999 79995 9999998   4557778888888888999999999999999999999887


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+ ++|+||||||+....++.+++.++|++.+++|+.|++++.+++.+.|              +||++||..+..+.++
T Consensus       609 ~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l--------------~iV~~SS~ag~~g~~g  673 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV--------------ALVLFSSVSGVLGSGG  673 (795)
T ss_dssp             TS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS--------------EEEEEEETHHHHTCSS
T ss_pred             hC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC--------------EEEEEccHHhcCCCCC
Confidence            76 99999999999888899999999999999999999999999987655              3999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      +..|+++|+    |+++|+.+++ ++||++|+|+||++.|+.+..... +.....+ ...... ..+++|..+.+.+++.
T Consensus       674 ~~~YaAaka----~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~~~~~-~~~~~~~-~~~g~~-~l~~~e~~~~~~~~l~  745 (795)
T 3slk_A          674 QGNYAAANS----FLDALAQQRQ-SRGLPTRSLAWGPWAEHGMASTLR-EAEQDRL-ARSGLL-PISTEEGLSQFDAACG  745 (795)
T ss_dssp             CHHHHHHHH----HHHHHHHHHH-HTTCCEEEEEECCCSCCCHHHHHH-HHHHHHH-HHTTBC-CCCHHHHHHHHHHHHT
T ss_pred             CHHHHHHHH----HHHHHHHHHH-HcCCeEEEEECCeECcchhhcccc-HHHHHHH-HhcCCC-CCCHHHHHHHHHHHHh
Confidence            999999995    6677777877 789999999999998765443221 1111222 222223 4567777777666655


Q ss_pred             ccC
Q 024976          246 DAA  248 (259)
Q Consensus       246 ~~~  248 (259)
                      ...
T Consensus       746 ~~~  748 (795)
T 3slk_A          746 GAH  748 (795)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            433

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.97  E-value=1.2e-29  Score=224.78  Aligned_cols=215  Identities=15%  Similarity=0.073  Sum_probs=173.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChh---hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      -.+++++||||+||||++++++|+++|++ |++++|+..   ..+++.+++...+.++.++.||++|.++++++++++ +
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            46799999999999999999999999995 999999864   456777778777888999999999999999999988 5


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .++++|+||||||....+.+.+.+.+++++.+++|+.+++++.+++.+    .+        .++||++||..+..+.++
T Consensus       303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~--------~~~~V~~SS~a~~~g~~g  370 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD--------LTAFVLFSSFASAFGAPG  370 (486)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC--------CSEEEEEEEHHHHTCCTT
T ss_pred             hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CC--------CCEEEEEcChHhcCCCCC
Confidence            678999999999988878888899999999999999999999988743    22        288999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      +..|+++|++++.|++.+    . ..|+++++|+||++.++.+....    ....+..  ......+++|+++++..++.
T Consensus       371 ~~~Yaaaka~l~~la~~~----~-~~gi~v~~i~pG~~~~~gm~~~~----~~~~~~~--~g~~~i~~e~~a~~l~~~l~  439 (486)
T 2fr1_A          371 LGGYAPGNAYLDGLAQQR----R-SDGLPATAVAWGTWAGSGMAEGP----VADRFRR--HGVIEMPPETACRALQNALD  439 (486)
T ss_dssp             CTTTHHHHHHHHHHHHHH----H-HTTCCCEEEEECCBC----------------CTT--TTEECBCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHH----H-hcCCeEEEEECCeeCCCcccchh----HHHHHHh--cCCCCCCHHHHHHHHHHHHh
Confidence            999999999999886644    4 45899999999999865332211    1111111  11235789999999999886


Q ss_pred             ccC
Q 024976          246 DAA  248 (259)
Q Consensus       246 ~~~  248 (259)
                      ...
T Consensus       440 ~~~  442 (486)
T 2fr1_A          440 RAE  442 (486)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.96  E-value=1.4e-28  Score=218.64  Aligned_cols=213  Identities=18%  Similarity=0.147  Sum_probs=172.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChh---hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      -.+++++||||+||||++++++|+++|+ +|++++|+..   ..++..+++...+.++.++.||++|.+++++++++   
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            3579999999999999999999999999 5999999863   45677778877788899999999999999999876   


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                        +++|+||||||......+.+.+.++++..+++|+.+++++.+++.+. .  +        .++||++||..+..+.++
T Consensus       334 --~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~--~--------~~~~V~~SS~a~~~g~~g  400 (511)
T 2z5l_A          334 --YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K--G--------LDAFVLFSSVTGTWGNAG  400 (511)
T ss_dssp             --SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T--T--------CCCEEEEEEGGGTTCCTT
T ss_pred             --CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c--C--------CCEEEEEeCHHhcCCCCC
Confidence              78999999999988888888999999999999999999998876432 0  2        278999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      +..|+++|++++.|++.+    . ..|+++++|+||++..+.+.....    ...+..  ......+++|+++.+..++.
T Consensus       401 ~~~YaaaKa~ld~la~~~----~-~~gi~v~sv~pG~~~~tgm~~~~~----~~~~~~--~g~~~l~~e~~a~~l~~al~  469 (511)
T 2z5l_A          401 QGAYAAANAALDALAERR----R-AAGLPATSVAWGLWGGGGMAAGAG----EESLSR--RGLRAMDPDAAVDALLGAMG  469 (511)
T ss_dssp             BHHHHHHHHHHHHHHHHH----H-TTTCCCEEEEECCBCSTTCCCCHH----HHHHHH--HTBCCBCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHH----H-HcCCcEEEEECCcccCCccccccc----HHHHHh--cCCCCCCHHHHHHHHHHHHh
Confidence            999999999999998854    4 568999999999993233322211    111111  11246789999999999886


Q ss_pred             ccCC
Q 024976          246 DAAV  249 (259)
Q Consensus       246 ~~~~  249 (259)
                      ....
T Consensus       470 ~~~~  473 (511)
T 2z5l_A          470 RNDV  473 (511)
T ss_dssp             HTCS
T ss_pred             CCCC
Confidence            5433

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=5.8e-28  Score=195.06  Aligned_cols=201  Identities=18%  Similarity=0.141  Sum_probs=152.0

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCe-EEEEcCCCCHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ...+++|+++||||+|+||++++++|+++|++|++++|+.++++.+.+      .++ .++.+|++         +.+.+
T Consensus        16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~~~~   80 (236)
T 3e8x_A           16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE---------EDFSH   80 (236)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT---------SCCGG
T ss_pred             ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH---------HHHHH
Confidence            356899999999999999999999999999999999999887665433      257 89999999         33445


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--  163 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  163 (259)
                      .++++|+||||||....        ++++..+++|+.+++++++++..    .+.        ++||++||..+..+.  
T Consensus        81 ~~~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~~~----~~~--------~~iv~~SS~~~~~~~~~  140 (236)
T 3e8x_A           81 AFASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEAEK----RGI--------KRFIMVSSVGTVDPDQG  140 (236)
T ss_dssp             GGTTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHHHH----HTC--------CEEEEECCTTCSCGGGS
T ss_pred             HHcCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHHHH----cCC--------CEEEEEecCCCCCCCCC
Confidence            56789999999996432        45788999999999999999843    232        789999998777665  


Q ss_pred             -ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       164 -~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                       .....|+.+|++++.+.+        ..||+++.|+||.+.++........      .........+.+++|+|+++++
T Consensus       141 ~~~~~~Y~~sK~~~e~~~~--------~~gi~~~~lrpg~v~~~~~~~~~~~------~~~~~~~~~~i~~~Dva~~~~~  206 (236)
T 3e8x_A          141 PMNMRHYLVAKRLADDELK--------RSSLDYTIVRPGPLSNEESTGKVTV------SPHFSEITRSITRHDVAKVIAE  206 (236)
T ss_dssp             CGGGHHHHHHHHHHHHHHH--------HSSSEEEEEEECSEECSCCCSEEEE------ESSCSCCCCCEEHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHHH--------HCCCCEEEEeCCcccCCCCCCeEEe------ccCCCcccCcEeHHHHHHHHHH
Confidence             567899999999998876        3479999999999997653222110      0111123557889999999999


Q ss_pred             hcCccCCccccccccc
Q 024976          243 LASDAAVHRDLIHLLD  258 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~  258 (259)
                      +++...  .+|+.+.+
T Consensus       207 ~~~~~~--~~g~~~~v  220 (236)
T 3e8x_A          207 LVDQQH--TIGKTFEV  220 (236)
T ss_dssp             HTTCGG--GTTEEEEE
T ss_pred             HhcCcc--ccCCeEEE
Confidence            998754  45655543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=7.3e-28  Score=198.07  Aligned_cols=182  Identities=12%  Similarity=0.092  Sum_probs=147.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++|+++||||+||||++++++|+++|++|++++|+..+..         +.++.++.+|++|.+++.++++       ++
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   65 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------GC   65 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------CC
Confidence            4689999999999999999999999999999999875432         4578999999999999998876       69


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc----------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY----------  160 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------  160 (259)
                      |+||||||..        +.++|++.+++|+.+++++++++.+    .+.        ++||++||..++          
T Consensus        66 D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~~----~~~--------~~iv~~SS~~~~g~~~~~~~~~  125 (267)
T 3rft_A           66 DGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAARA----HGQ--------PRIVFASSNHTIGYYPQTERLG  125 (267)
T ss_dssp             SEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHHH----TTC--------CEEEEEEEGGGGTTSBTTSCBC
T ss_pred             CEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHHH----cCC--------CEEEEEcchHHhCCCCCCCCCC
Confidence            9999999973        2345789999999999999999943    332        789999998877          


Q ss_pred             --ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          161 --TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       161 --~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                        .+..+...|+.||++.+.+++.++.+++    ++++.|+||.+.++......    .          ..+..++|+++
T Consensus       126 e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g----~~~~~vr~~~v~~~~~~~~~----~----------~~~~~~~d~a~  187 (267)
T 3rft_A          126 PDVPARPDGLYGVSKCFGENLARMYFDKFG----QETALVRIGSCTPEPNNYRM----L----------STWFSHDDFVS  187 (267)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECBCSSSCCSTTH----H----------HHBCCHHHHHH
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHhC----CeEEEEEeecccCCCCCCCc----e----------eeEEcHHHHHH
Confidence              3445567899999999999999998874    89999999999854322111    0          11457888888


Q ss_pred             HHHHhcCc
Q 024976          239 AALYLASD  246 (259)
Q Consensus       239 ~~~~l~s~  246 (259)
                      .+..++..
T Consensus       188 ~~~~~~~~  195 (267)
T 3rft_A          188 LIEAVFRA  195 (267)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            88777654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=5.3e-26  Score=181.74  Aligned_cols=187  Identities=10%  Similarity=0.038  Sum_probs=144.6

Q ss_pred             cEEEEeCCccchHHHHHHHHH-HcCCeEEEEeCChh-hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           13 KVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~-~~G~~vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      |+++||||+|+||++++++|+ ++|++|++++|+.+ +++++.    ..+.++.++.+|++|+++++++++       ++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------NA   74 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------CC
Confidence            689999999999999999999 89999999999976 544432    235679999999999999988875       68


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch---
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI---  167 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~---  167 (259)
                      |+||||+|..                   |+.     ++.+++.|++.+.        ++||++||..++.+.+...   
T Consensus        75 d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~--------~~iv~iSs~~~~~~~~~~~~~~  122 (221)
T 3r6d_A           75 EVVFVGAMES-------------------GSD-----MASIVKALSRXNI--------RRVIGVSMAGLSGEFPVALEKW  122 (221)
T ss_dssp             SEEEESCCCC-------------------HHH-----HHHHHHHHHHTTC--------CEEEEEEETTTTSCSCHHHHHH
T ss_pred             CEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCC--------CeEEEEeeceecCCCCcccccc
Confidence            9999999952                   222     7888888887654        7999999998887665544   


Q ss_pred             -------hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          168 -------HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       168 -------~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                             .|+.+|.+++.+.+        ..||+++.|+||++.++.........     .......+++.+++|+|+++
T Consensus       123 ~~~~~~~~y~~~K~~~e~~~~--------~~~i~~~~vrpg~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~dvA~~~  189 (221)
T 3r6d_A          123 TFDNLPISYVQGERQARNVLR--------ESNLNYTILRLTWLYNDPEXTDYELI-----PEGAQFNDAQVSREAVVKAI  189 (221)
T ss_dssp             HHHTSCHHHHHHHHHHHHHHH--------HSCSEEEEEEECEEECCTTCCCCEEE-----CTTSCCCCCEEEHHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHH--------hCCCCEEEEechhhcCCCCCcceeec-----cCCccCCCceeeHHHHHHHH
Confidence                   89999999988775        24799999999999865332221100     01111223467899999999


Q ss_pred             HHhc--CccCCcccccc
Q 024976          241 LYLA--SDAAVHRDLIH  255 (259)
Q Consensus       241 ~~l~--s~~~~~~tG~~  255 (259)
                      ++++  ++++.|+++..
T Consensus       190 ~~l~~~~~~~~~~~~~~  206 (221)
T 3r6d_A          190 FDILHAADETPFHRTSI  206 (221)
T ss_dssp             HHHHTCSCCGGGTTEEE
T ss_pred             HHHHHhcChhhhhccee
Confidence            9999  98888776543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.94  E-value=4.3e-27  Score=190.47  Aligned_cols=197  Identities=15%  Similarity=0.094  Sum_probs=149.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++|+++||||+|+||++++++|+++|+  +|++++|+.+.++...      ..++.++.+|++|.++++++++      
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~------   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ------   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS------
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc------
Confidence            5789999999999999999999999999  9999999876433211      1247889999999988777654      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                       ++|+||||||...       ..++++..+++|+.++..+++++.    +.+.        ++||++||..++.+  ...
T Consensus        84 -~~d~vi~~ag~~~-------~~~~~~~~~~~n~~~~~~~~~~~~----~~~~--------~~iv~~SS~~~~~~--~~~  141 (242)
T 2bka_A           84 -GHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAK----AGGC--------KHFNLLSSKGADKS--SNF  141 (242)
T ss_dssp             -SCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHH----HTTC--------CEEEEECCTTCCTT--CSS
T ss_pred             -CCCEEEECCCccc-------ccCCcccceeeeHHHHHHHHHHHH----HCCC--------CEEEEEccCcCCCC--Ccc
Confidence             7999999999532       124578899999999999888754    3332        78999999887653  345


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecccccCCcccCCCChHHHHHHhhhhcc----CCCCCCHHHHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA----AYKFGEKWDIAMAALY  242 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi-~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~  242 (259)
                      .|+.+|++++.+++.+        ++ +++.|+||.+.++..... ..+..........|    .+++.+++|+|+++++
T Consensus       142 ~Y~~sK~~~e~~~~~~--------~~~~~~~vrpg~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  212 (242)
T 2bka_A          142 LYLQVKGEVEAKVEEL--------KFDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLN  212 (242)
T ss_dssp             HHHHHHHHHHHHHHTT--------CCSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhc--------CCCCeEEEcCceecCCCCCCc-HHHHHHHHhhcccCccccCCcccCHHHHHHHHHH
Confidence            7999999999988642        46 899999999997753221 12222222222333    4678899999999999


Q ss_pred             hcCccCC
Q 024976          243 LASDAAV  249 (259)
Q Consensus       243 l~s~~~~  249 (259)
                      ++++...
T Consensus       213 ~~~~~~~  219 (242)
T 2bka_A          213 NVVRPRD  219 (242)
T ss_dssp             HHTSCCC
T ss_pred             HHhCccc
Confidence            9987654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=5.8e-26  Score=193.33  Aligned_cols=213  Identities=17%  Similarity=0.135  Sum_probs=162.0

Q ss_pred             CCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHc-CC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHH
Q 024976            2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKH-GA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRV   79 (259)
Q Consensus         2 ~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~-G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   79 (259)
                      +++....++++|+++||||+|+||++++++|+++ |+ +|++++|+..+.+...+++.  ..++.++.+|++|.+++.++
T Consensus        11 ~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~   88 (344)
T 2gn4_A           11 SMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYA   88 (344)
T ss_dssp             -----CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHH
T ss_pred             CCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHH
Confidence            3444445688999999999999999999999999 98 89999999887776666653  34689999999999998877


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        80 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      ++       ++|+|||+||.... +   ....+....+++|+.++.++++++.+.    +.        ++||++||..+
T Consensus        89 ~~-------~~D~Vih~Aa~~~~-~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v--------~~~V~~SS~~~  145 (344)
T 2gn4_A           89 LE-------GVDICIHAAALKHV-P---IAEYNPLECIKTNIMGASNVINACLKN----AI--------SQVIALSTDKA  145 (344)
T ss_dssp             TT-------TCSEEEECCCCCCH-H---HHHHSHHHHHHHHHHHHHHHHHHHHHT----TC--------SEEEEECCGGG
T ss_pred             Hh-------cCCEEEECCCCCCC-C---chhcCHHHHHHHHHHHHHHHHHHHHhC----CC--------CEEEEecCCcc
Confidence            64       69999999996431 1   112345688999999999999999864    22        78999999876


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhh---cc------CCCC
Q 024976          160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY---MA------AYKF  230 (259)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~---~~------~~~~  230 (259)
                      ..|   ...|+.||++++.++++++.+++ +.|++++.++||.+.++...  . -+.+.......   .+      ...+
T Consensus       146 ~~p---~~~Y~~sK~~~E~~~~~~~~~~~-~~g~~~~~vRpg~v~g~~~~--~-i~~~~~~~~~g~~~~~i~~~~~~r~~  218 (344)
T 2gn4_A          146 ANP---INLYGATKLCSDKLFVSANNFKG-SSQTQFSVVRYGNVVGSRGS--V-VPFFKKLVQNKASEIPITDIRMTRFW  218 (344)
T ss_dssp             SSC---CSHHHHHHHHHHHHHHHGGGCCC-SSCCEEEEECCCEETTCTTS--H-HHHHHHHHHHTCCCEEESCTTCEEEE
T ss_pred             CCC---ccHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEEEeccEECCCCC--H-HHHHHHHHHcCCCceEEeCCCeEEee
Confidence            544   46899999999999999999887 78999999999999875421  1 11222222111   11      1125


Q ss_pred             CCHHHHHHHHHHhcCc
Q 024976          231 GEKWDIAMAALYLASD  246 (259)
Q Consensus       231 ~~~~dva~~~~~l~s~  246 (259)
                      .+++|+++++++++..
T Consensus       219 i~v~D~a~~v~~~l~~  234 (344)
T 2gn4_A          219 ITLDEGVSFVLKSLKR  234 (344)
T ss_dssp             ECHHHHHHHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHhh
Confidence            7899999999999865

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.94  E-value=4e-26  Score=192.16  Aligned_cols=213  Identities=15%  Similarity=0.097  Sum_probs=154.2

Q ss_pred             CCCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976            1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus         1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      |+..+....-..+++|||||+|+||++++++|+++|++|++++|+.+. +.    +     ++.++.+|++|.+++.+++
T Consensus         1 ~~~~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~   70 (321)
T 2pk3_A            1 MRGSHHHHHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVI   70 (321)
T ss_dssp             ------------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHH
T ss_pred             CCCcccccccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHH
Confidence            444445555667899999999999999999999999999999998654 21    1     5889999999999999988


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +.     +++|+|||+||.....    .+.++++..+++|+.++.++++++ +.+.  +.        ++||++||...+
T Consensus        71 ~~-----~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~--------~~iv~~SS~~v~  130 (321)
T 2pk3_A           71 SD-----IKPDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LD--------CRILTIGSSEEY  130 (321)
T ss_dssp             HH-----HCCSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CC--------CEEEEEEEGGGT
T ss_pred             Hh-----cCCCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CC--------CeEEEEccHHhc
Confidence            75     3799999999964321    123457889999999999999999 5542  22        789999998765


Q ss_pred             ccC-------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhh---h
Q 024976          161 TAT-------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD---Y  224 (259)
Q Consensus       161 ~~~-------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~---~  224 (259)
                      .+.             .+...|+.+|.+.+.+++.++.++    |++++.++||.+.++.................   .
T Consensus       131 g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g  206 (321)
T 2pk3_A          131 GMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY----GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEME  206 (321)
T ss_dssp             BSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc----CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcC
Confidence            432             456789999999999999998875    49999999999997765432111222222111   1


Q ss_pred             -----------ccCCCCCCHHHHHHHHHHhcCcc
Q 024976          225 -----------MAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       225 -----------~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                                 .+...+.+++|+|++++++++..
T Consensus       207 ~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  240 (321)
T 2pk3_A          207 KQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG  240 (321)
T ss_dssp             SSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             CCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC
Confidence                       11223678999999999999754

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.94  E-value=1.7e-25  Score=189.74  Aligned_cols=211  Identities=15%  Similarity=0.032  Sum_probs=159.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cCCCeEEE-EcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGL-EGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~v~~~-~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++++++||||+|+||++++++|+++|++|++++|+.+..+.+.+.+.. .+.++.++ .+|++|.++++++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            46789999999999999999999999999999999998776666555532 23568888 899999988777654     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cC--
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-AT--  163 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~--  163 (259)
                        ++|+|||+||.....       +++++.+++|+.++.++++++.+.   .+        .++||++||...+. +.  
T Consensus        83 --~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~--------~~~iv~~SS~~~~~~~~~~  142 (342)
T 1y1p_A           83 --GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAAT---PS--------VKRFVLTSSTVSALIPKPN  142 (342)
T ss_dssp             --TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTC---TT--------CCEEEEECCGGGTCCCCTT
T ss_pred             --CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHhC---CC--------CcEEEEeccHHHhcCCCCC
Confidence              699999999965321       245678999999999999998752   22        27899999987652 21  


Q ss_pred             ----------------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--
Q 024976          164 ----------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--  213 (259)
Q Consensus       164 ----------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--  213 (259)
                                                  .+...|+.||.+.+.+++.++.+++ . +++++.++||.+.++.......  
T Consensus       143 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~-~~~~~~~rp~~v~g~~~~~~~~~~  220 (342)
T 1y1p_A          143 VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-P-HFTLNAVLPNYTIGTIFDPETQSG  220 (342)
T ss_dssp             CCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-C-SSEEEEEEESEEECCCSCTTTCCC
T ss_pred             CCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcC-C-CceEEEEcCCceECCCCCCCCCCc
Confidence                                        1346799999999999999999986 4 8999999999999775433211  


Q ss_pred             -hHHHHHHhhhh--------ccCCCCCCHHHHHHHHHHhcCc
Q 024976          214 -PEEIRSKATDY--------MAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       214 -~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~s~  246 (259)
                       .......+...        .+...+.+++|+|+++++++..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  262 (342)
T 1y1p_A          221 STSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL  262 (342)
T ss_dssp             HHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC
Confidence             11112111111        1233567899999999998854

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.93  E-value=3.4e-25  Score=188.28  Aligned_cols=219  Identities=14%  Similarity=0.047  Sum_probs=159.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      |++|||||+|+||++++++|+++|++|++++|+. .......+.+.. ..++.++.+|++|.++++++++..     ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPD   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence            5799999999999999999999999999999853 223333444443 236889999999999999988752     699


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----------  161 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  161 (259)
                      +|||+||....    +.+.++++..+++|+.++.++++++.+.+.+           ++||++||...+.          
T Consensus        76 ~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~-----------~~iv~~SS~~v~g~~~~~~~~e~  140 (347)
T 1orr_A           76 SCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNSN-----------CNIIYSSTNKVYGDLEQYKYNET  140 (347)
T ss_dssp             EEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT-----------CEEEEEEEGGGGTTCTTSCEEEC
T ss_pred             EEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-----------ceEEEeccHHHhCCCCcCCcccc
Confidence            99999996321    1234567889999999999999999876432           5799999976543          


Q ss_pred             -----------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC---hHHHHHH-
Q 024976          162 -----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSK-  220 (259)
Q Consensus       162 -----------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~---~~~~~~~-  220 (259)
                                       +..+...|+.+|.+.+.+++.++.++    |++++.++||.+.++.......   -...... 
T Consensus       141 ~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~  216 (347)
T 1orr_A          141 ETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF----GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKA  216 (347)
T ss_dssp             SSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHH
T ss_pred             cccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh----CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHH
Confidence                             22356789999999999999999886    4999999999999775432211   1111111 


Q ss_pred             hhhhc----cCC---------CCCCHHHHHHHHHHhcCccCCcccccccc
Q 024976          221 ATDYM----AAY---------KFGEKWDIAMAALYLASDAAVHRDLIHLL  257 (259)
Q Consensus       221 ~~~~~----~~~---------~~~~~~dva~~~~~l~s~~~~~~tG~~i~  257 (259)
                      .....    +..         .+..++|+|+++++++.. ....+|+.+.
T Consensus       217 ~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~  265 (347)
T 1orr_A          217 VEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFN  265 (347)
T ss_dssp             HHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEE
T ss_pred             HhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEE
Confidence            11110    211         256899999999999863 2334565443

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.93  E-value=4.7e-25  Score=185.71  Aligned_cols=223  Identities=16%  Similarity=0.071  Sum_probs=163.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHH-HcCCeEEEEeCChhh------------HHHHHHHHHhcCCCeEEEEcCCCCHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRRKTV------------LRSAVAALHSLGIPAIGLEGDVRKRED   75 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~-~~G~~vv~~~r~~~~------------~~~~~~~~~~~~~~v~~~~~Dl~~~~~   75 (259)
                      .+.+|++|||||++|||++++..|+ +.|++++++.+..+.            .....+.+.+.|.+...+.||++++++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4678999999999999999999999 689999988775432            334566677778899999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCC-------------CCC---------------------CCCCHHHHHHH---Hh
Q 024976           76 AVRVVESTINHFGKLDILVNAAAGNFL-------------VPA---------------------EDLSPNGFRTV---IE  118 (259)
Q Consensus        76 ~~~~~~~~~~~~g~id~li~~ag~~~~-------------~~~---------------------~~~~~~~~~~~---~~  118 (259)
                      ++++++++.+.+|+||+||||++....             +++                     ...+.++++.+   |.
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            999999999999999999999996421             111                     11244555544   44


Q ss_pred             ccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 024976          119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVN  196 (259)
Q Consensus       119 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  196 (259)
                      ...++.+...+...+.|.+          +++++.+|+..+....|.+  ..++++|++|+..+|.|+.+++ +  +++|
T Consensus       207 ~s~~s~w~~al~~a~lla~----------G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~-~--~~a~  273 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLEE----------GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP-S--IRAF  273 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEEE----------EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT-T--EEEE
T ss_pred             hhHHHHHHHHHHhhhcccC----------CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC-C--CcEE
Confidence            4555566666666555544          3889999998887655543  4789999999999999999997 4  8999


Q ss_pred             EEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          197 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       197 ~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      .++||.+.|.....-..-+-....+.+.  +++.++-|.+.+.+..|..+
T Consensus       274 v~v~~a~vT~AssaIP~~ply~~~l~kv--mk~~g~heg~ieq~~rl~~~  321 (401)
T 4ggo_A          274 VSVNKGLVTRASAVIPVIPLYLASLFKV--MKEKGNHEGCIEQITRLYAE  321 (401)
T ss_dssp             EEECCCCCCTTGGGSSSHHHHHHHHHHH--HHHHTCCCCHHHHHHHHHHH
T ss_pred             EEEcCccccchhhcCCCchHHHHHHHHH--HHhcCCCCchHHHHHHHHHH
Confidence            9999999865433222222222222222  22345667788887777754

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=2.9e-25  Score=188.48  Aligned_cols=173  Identities=17%  Similarity=0.097  Sum_probs=137.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .+++++||||+|+||++++++|+++|++|++++|+.+......+.+... +.++.++.+|++|.+++++++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            5689999999999999999999999999999999876655555555432 55789999999999999999875     47


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------  161 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  161 (259)
                      +|+||||||......    ..++....+++|+.+++++++++.    +.+.        ++||++||...+.        
T Consensus        79 ~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--------~~iv~~SS~~~~g~~~~~~~~  142 (341)
T 3enk_A           79 ITAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVMR----ERAV--------KRIVFSSSATVYGVPERSPID  142 (341)
T ss_dssp             CCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHH----HTTC--------CEEEEEEEGGGBCSCSSSSBC
T ss_pred             CcEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHHH----hCCC--------CEEEEEecceEecCCCCCCCC
Confidence            999999999643221    233456788899999998877653    3432        7899999976652        


Q ss_pred             ---cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc
Q 024976          162 ---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       162 ---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~  207 (259)
                         +..+...|+.+|.+.+.+++.++.+++   |++++.++|+.+..+.
T Consensus       143 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          143 ETFPLSATNPYGQTKLMAEQILRDVEAADP---SWRVATLRYFNPVGAH  188 (341)
T ss_dssp             TTSCCBCSSHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEECEEECCC
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHhhcCC---CceEEEEeeccccCCc
Confidence               223346899999999999999998864   6999999999998663

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.93  E-value=6.5e-25  Score=185.72  Aligned_cols=205  Identities=17%  Similarity=0.074  Sum_probs=146.4

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ....++++++++||||+|+||++++++|+++|++|++++|+.....+..+.+    .++.++.+|++|.+++.++++++ 
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~-   87 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF-   87 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc-
Confidence            3445688999999999999999999999999999999999654322111111    36889999999999999988765 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  163 (259)
                          ++|+||||||.....     +.++++  +++|+.+++++++++...    +.        ++||++||...+.+. 
T Consensus        88 ----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~~--------~~iV~~SS~~~~~~~~  144 (330)
T 2pzm_A           88 ----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASKA----GV--------KRLLNFQTALCYGRPA  144 (330)
T ss_dssp             ----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHH----TC--------SEEEEEEEGGGGCSCS
T ss_pred             ----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHHc----CC--------CEEEEecCHHHhCCCc
Confidence                799999999965332     445565  999999999999999742    22        789999998776443 


Q ss_pred             ----c------cchhhHHHHHHHHHHHHHHHHHhcCCCCeE-EEEEecccccCCcccCCCChHHHHHHhhh-h-cc----
Q 024976          164 ----W------YQIHVSAAKAAVDSITRSLALEWGTDYAIR-VNGIAPGPIKDTAGVSKLAPEEIRSKATD-Y-MA----  226 (259)
Q Consensus       164 ----~------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~-v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~-~~----  226 (259)
                          +      +...|+.+|++++.+++.+  ++. ...|| ++.+.||. .+     .+. ......... . ..    
T Consensus       145 ~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~-~~~iR~~~v~gp~~-~~-----~~~-~~~~~~~~~~~~~~~~~~  214 (330)
T 2pzm_A          145 TVPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVP-VVSLRLANVTGPRL-AI-----GPI-PTFYKRLKAGQKCFCSDT  214 (330)
T ss_dssp             SSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSC-EEEEEECEEECTTC-CS-----SHH-HHHHHHHHTTCCCCEESC
T ss_pred             cCCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCC-EEEEeeeeeECcCC-CC-----CHH-HHHHHHHHcCCEEeCCCC
Confidence                2      5678999999999999876  433 33455 45555553 11     111 111111111 0 00    


Q ss_pred             CCCCCCHHHHHH-HHHHhcCcc
Q 024976          227 AYKFGEKWDIAM-AALYLASDA  247 (259)
Q Consensus       227 ~~~~~~~~dva~-~~~~l~s~~  247 (259)
                      ..++.+++|+|+ +++++++..
T Consensus       215 ~~~~i~~~Dva~~a~~~~~~~~  236 (330)
T 2pzm_A          215 VRDFLDMSDFLAIADLSLQEGR  236 (330)
T ss_dssp             EECEEEHHHHHHHHHHHTSTTC
T ss_pred             EecceeHHHHHHHHHHHHhhcC
Confidence            245678999999 999999763

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.92  E-value=3.4e-25  Score=225.53  Aligned_cols=178  Identities=16%  Similarity=0.144  Sum_probs=141.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhH---HHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVL---RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~---~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+|+++||||++|||++++++|+++|++ |++++|+..+.   .+..+++...+.++.++.||++|.++++++++++.+ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence            6899999999999999999999999997 88889885443   344556666677899999999999999999999874 


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.|.+.          |+||++||..+..+.+++
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~----------g~iV~iSS~ag~~g~~g~ 2031 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL----------DYFVIFSSVSCGRGNAGQ 2031 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC----------CEEEEECCHHHHTTCTTC
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC----------CEEEEecchhhcCCCCCc
Confidence            7999999999998877888999999999999999999999999999987553          789999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeccccc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  204 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~  204 (259)
                      ..|+++|+++++|++.++.+     |++..++.+|.+.
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~~-----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRHD-----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHC-----CCcEEEEEccCcC
Confidence            99999999999999987654     5777777777664

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.92  E-value=1.3e-24  Score=176.62  Aligned_cols=201  Identities=14%  Similarity=0.037  Sum_probs=145.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHc--CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++|+++||||+|+||++++++|+++  |++|++++|+.++.+..       ..++.++.+|++|.+++.++++      
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~------   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ------   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc------
Confidence            35789999999999999999999999  89999999987654332       3467889999999999888775      


Q ss_pred             CCccEEEECCCCCCCCCC---------CCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           88 GKLDILVNAAAGNFLVPA---------EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                       .+|+||||||.......         .+...+++.+.+++|+.++.++++++...    +.        ++||++||..
T Consensus        69 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~--------~~iv~~SS~~  135 (253)
T 1xq6_A           69 -GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GV--------KHIVVVGSMG  135 (253)
T ss_dssp             -TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TC--------SEEEEEEETT
T ss_pred             -CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CC--------CEEEEEcCcc
Confidence             59999999996532111         12223445677899999999998887543    22        6899999988


Q ss_pred             ccccCccchh-----hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-CChHHHHHHhhhhccCCCCCC
Q 024976          159 HYTATWYQIH-----VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMAAYKFGE  232 (259)
Q Consensus       159 ~~~~~~~~~~-----Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~  232 (259)
                      +..+..+...     |+.+|.+++.+++        ..|++++.++||.+.++..... ..... ......  ...++.+
T Consensus       136 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~i~~~~vrpg~v~~~~~~~~~~~~~~-~~~~~~--~~~~~~~  204 (253)
T 1xq6_A          136 GTNPDHPLNKLGNGNILVWKRKAEQYLA--------DSGTPYTIIRAGGLLDKEGGVRELLVGK-DDELLQ--TDTKTVP  204 (253)
T ss_dssp             TTCTTCGGGGGGGCCHHHHHHHHHHHHH--------TSSSCEEEEEECEEECSCSSSSCEEEES-TTGGGG--SSCCEEE
T ss_pred             CCCCCCccccccchhHHHHHHHHHHHHH--------hCCCceEEEecceeecCCcchhhhhccC-CcCCcC--CCCcEEc
Confidence            7655443333     5669999988775        3579999999999987643211 00000 001111  1245778


Q ss_pred             HHHHHHHHHHhcCcc
Q 024976          233 KWDIAMAALYLASDA  247 (259)
Q Consensus       233 ~~dva~~~~~l~s~~  247 (259)
                      ++|+|+++++++...
T Consensus       205 ~~Dva~~~~~~~~~~  219 (253)
T 1xq6_A          205 RADVAEVCIQALLFE  219 (253)
T ss_dssp             HHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHHHHHcCc
Confidence            999999999999764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.92  E-value=9.2e-25  Score=174.27  Aligned_cols=180  Identities=14%  Similarity=0.125  Sum_probs=144.5

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHHHcCCccE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~~~g~id~   92 (259)
                      +++||||+|+||++++++|+++|++|++++|+.+..+..        .++.++.+|++| .+++.++++       ++|+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~d~   66 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GMDA   66 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CCCE
Confidence            699999999999999999999999999999997654321        468999999999 888877764       6999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-------  165 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  165 (259)
                      ||||+|...            ...+++|+.++..+++++.    +.+.        ++||++||..+..+.+.       
T Consensus        67 vi~~ag~~~------------~~~~~~n~~~~~~l~~a~~----~~~~--------~~iv~~SS~~~~~~~~~~e~~~~~  122 (219)
T 3dqp_A           67 IINVSGSGG------------KSLLKVDLYGAVKLMQAAE----KAEV--------KRFILLSTIFSLQPEKWIGAGFDA  122 (219)
T ss_dssp             EEECCCCTT------------SSCCCCCCHHHHHHHHHHH----HTTC--------CEEEEECCTTTTCGGGCCSHHHHH
T ss_pred             EEECCcCCC------------CCcEeEeHHHHHHHHHHHH----HhCC--------CEEEEECcccccCCCccccccccc
Confidence            999999643            1277899999999988874    3332        68999999888776655       


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|+.+|.+.+.+.+      . ..|++++.++||.+.++.....+..         ..+...+.+++|+|+++++++.
T Consensus       123 ~~~Y~~sK~~~e~~~~------~-~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~Dva~~i~~~l~  186 (219)
T 3dqp_A          123 LKDYYIAKHFADLYLT------K-ETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIGDVADTIKELVM  186 (219)
T ss_dssp             THHHHHHHHHHHHHHH------H-SCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHHHHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHHH------h-ccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHHHHHHHHHHHHh
Confidence            7789999999998887      3 5689999999999987643322210         1234567889999999999997


Q ss_pred             ccC
Q 024976          246 DAA  248 (259)
Q Consensus       246 ~~~  248 (259)
                      ...
T Consensus       187 ~~~  189 (219)
T 3dqp_A          187 TDH  189 (219)
T ss_dssp             CGG
T ss_pred             Ccc
Confidence            654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.92  E-value=8.2e-25  Score=187.07  Aligned_cols=224  Identities=18%  Similarity=0.109  Sum_probs=159.0

Q ss_pred             EEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChh--hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           14 VALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +++||||+|+||++++++|+++ |++|++++|+..  ..+.+ +++. .+.++.++.+|++|.+++.+++++.     ++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhhc-----CC
Confidence            5999999999999999999998 799999998641  12221 1121 1346899999999999999988752     79


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---------  161 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------  161 (259)
                      |+||||||....    +.+.++++..+++|+.+++++++++.+.|..-+...   ..+++||++||...+.         
T Consensus        75 d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~---~~~~~iv~~SS~~v~g~~~~~~~~~  147 (361)
T 1kew_A           75 DAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK---KNNFRFHHISTDEVYGDLPHPDEVE  147 (361)
T ss_dssp             SEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHH---HHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred             CEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCccccc---ccCceEEEeCCHHHhCCCccccccc
Confidence            999999996431    123456788999999999999999999875311000   0014899999975432         


Q ss_pred             ------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhh--c--
Q 024976          162 ------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--M--  225 (259)
Q Consensus       162 ------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~--  225 (259)
                                  +..+...|+.+|++.+.+++.++.++    |++++.++||.+.++..................  .  
T Consensus       148 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  223 (361)
T 1kew_A          148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI  223 (361)
T ss_dssp             TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEE
T ss_pred             ccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceE
Confidence                        12345689999999999999999886    499999999999987643211112222222111  1  


Q ss_pred             -----cCCCCCCHHHHHHHHHHhcCccCCccccccccc
Q 024976          226 -----AAYKFGEKWDIAMAALYLASDAAVHRDLIHLLD  258 (259)
Q Consensus       226 -----~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~  258 (259)
                           +...+..++|+|++++++++..   .+|+.+.+
T Consensus       224 ~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v  258 (361)
T 1kew_A          224 YGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNI  258 (361)
T ss_dssp             ETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEE
T ss_pred             cCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEe
Confidence                 1234678999999999999653   35655543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.92  E-value=9.9e-25  Score=184.79  Aligned_cols=215  Identities=15%  Similarity=0.025  Sum_probs=155.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChh--hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++. .+.++.++.+|++|.+++.+++       
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~-------   73 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELV-------   73 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHH-------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHh-------
Confidence            4689999999999999999999997  89999988642  11111 1111 1346899999999999988887       


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------  161 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  161 (259)
                      +++|+|||+||....    +.+.++++..+++|+.++.++++++.+.   ..        .++||++||...+.      
T Consensus        74 ~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~--------~~~iv~~SS~~vyg~~~~~~  138 (336)
T 2hun_A           74 RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NP--------EVRFVHVSTDEVYGDILKGS  138 (336)
T ss_dssp             HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CT--------TSEEEEEEEGGGGCCCSSSC
T ss_pred             hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CC--------CcEEEEeccHHHHCCCCCCC
Confidence            279999999996421    1234567789999999999999999876   11        16899999976432      


Q ss_pred             -----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhh--c-------cC
Q 024976          162 -----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--M-------AA  227 (259)
Q Consensus       162 -----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~-------~~  227 (259)
                           +..+...|+.+|.+.+.+++.++.++    |++++.++||.+.++..................  .       +.
T Consensus       139 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (336)
T 2hun_A          139 FTENDRLMPSSPYSATKAASDMLVLGWTRTY----NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNV  214 (336)
T ss_dssp             BCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---C
T ss_pred             cCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCce
Confidence                 33456689999999999999998875    499999999999977643211112222222111  1       12


Q ss_pred             CCCCCHHHHHHHHHHhcCccCCcccccccc
Q 024976          228 YKFGEKWDIAMAALYLASDAAVHRDLIHLL  257 (259)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~~~~~~tG~~i~  257 (259)
                      ..+..++|+|++++++++..   .+|+.+.
T Consensus       215 ~~~i~v~Dva~~~~~~~~~~---~~g~~~~  241 (336)
T 2hun_A          215 RDWLYVEDHVRAIELVLLKG---ESREIYN  241 (336)
T ss_dssp             EEEEEHHHHHHHHHHHHHHC---CTTCEEE
T ss_pred             eeeEEHHHHHHHHHHHHhCC---CCCCEEE
Confidence            34677999999999998643   2455443

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=2.4e-24  Score=173.93  Aligned_cols=185  Identities=12%  Similarity=0.063  Sum_probs=131.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +..|+++||||+|+||++++++|+++| ++|++++|+.+.++..      ...++.++.+|++|+++++++++       
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~-------   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ-------   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc-------
Confidence            345899999999999999999999999 8999999997654321      13468999999999999988875       


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc--
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--  166 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--  166 (259)
                      .+|+||||+|..        +              ....++.+++.|++.+.        ++||++||...+.+.+..  
T Consensus        88 ~~D~vv~~a~~~--------~--------------~~~~~~~~~~~~~~~~~--------~~iV~iSS~~~~~~~~~~~~  137 (236)
T 3qvo_A           88 GQDIVYANLTGE--------D--------------LDIQANSVIAAMKACDV--------KRLIFVLSLGIYDEVPGKFV  137 (236)
T ss_dssp             TCSEEEEECCST--------T--------------HHHHHHHHHHHHHHTTC--------CEEEEECCCCC---------
T ss_pred             CCCEEEEcCCCC--------c--------------hhHHHHHHHHHHHHcCC--------CEEEEEecceecCCCCcccc
Confidence            689999999841        1              11346678888887764        899999998876554432  


Q ss_pred             -----------hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc-CCCCCCHH
Q 024976          167 -----------IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-AYKFGEKW  234 (259)
Q Consensus       167 -----------~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  234 (259)
                                 ..|..+|           ..+. +.||+++.|+||.+.++.... .      .......+ .+++++++
T Consensus       138 ~~~~~~~~~~~~~~~~~~-----------~~l~-~~gi~~~~vrPg~i~~~~~~~-~------~~~~~~~~~~~~~i~~~  198 (236)
T 3qvo_A          138 EWNNAVIGEPLKPFRRAA-----------DAIE-ASGLEYTILRPAWLTDEDIID-Y------ELTSRNEPFKGTIVSRK  198 (236)
T ss_dssp             -------CGGGHHHHHHH-----------HHHH-TSCSEEEEEEECEEECCSCCC-C------EEECTTSCCSCSEEEHH
T ss_pred             cchhhcccchHHHHHHHH-----------HHHH-HCCCCEEEEeCCcccCCCCcc-e------EEeccCCCCCCcEECHH
Confidence                       2233322           2234 678999999999998654321 1      01111122 36778999


Q ss_pred             HHHHHHHHhcCccCCcccccccc
Q 024976          235 DIAMAALYLASDAAVHRDLIHLL  257 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~  257 (259)
                      |||++++++++++..++ |+.+.
T Consensus       199 DvA~~i~~ll~~~~~~~-g~~~~  220 (236)
T 3qvo_A          199 SVAALITDIIDKPEKHI-GENIG  220 (236)
T ss_dssp             HHHHHHHHHHHSTTTTT-TEEEE
T ss_pred             HHHHHHHHHHcCccccc-CeeEE
Confidence            99999999999888776 55543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=5.1e-24  Score=181.97  Aligned_cols=215  Identities=17%  Similarity=0.135  Sum_probs=159.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +++++++||||+|+||++++++|+++|++|++++|+.+..+...+.+. .+.++.++.+|++|.+++.++++.+     +
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   80 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----Q   80 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----C
Confidence            568999999999999999999999999999999998765444443332 2456889999999999999988765     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------  161 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  161 (259)
                      +|+|||+||...    .+.+.++++..+++|+.++.++++++.+.   ...        ++||++||...+.        
T Consensus        81 ~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~--------~~~v~~SS~~vyg~~~~~~~~  145 (357)
T 1rkx_A           81 PEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGV--------KAVVNITSDKCYDNKEWIWGY  145 (357)
T ss_dssp             CSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCC--------CEEEEECCGGGBCCCCSSSCB
T ss_pred             CCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCC--------CeEEEecCHHHhCCCCcCCCC
Confidence            999999999521    12234667889999999999999999763   112        7899999976432        


Q ss_pred             ----cCccchhhHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEEecccccCCcccCC-CChHHHHHHhhhhcc-----
Q 024976          162 ----ATWYQIHVSAAKAAVDSITRSLALEWGT-----DYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMA-----  226 (259)
Q Consensus       162 ----~~~~~~~Y~~sK~a~~~l~~~la~e~~~-----~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~~~-----  226 (259)
                          +..+...|+.+|.+.+.+++.++.++..     +.|++++.++||.+.++..... ..-..+........+     
T Consensus       146 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~  225 (357)
T 1rkx_A          146 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRN  225 (357)
T ss_dssp             CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSC
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECC
Confidence                2334668999999999999999998720     2379999999999997654211 111222222211111     


Q ss_pred             ---CCCCCCHHHHHHHHHHhcC
Q 024976          227 ---AYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       227 ---~~~~~~~~dva~~~~~l~s  245 (259)
                         ...+...+|++++++.++.
T Consensus       226 ~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          226 PHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             TTCEECCEETHHHHHHHHHHHH
T ss_pred             CCCeeccEeHHHHHHHHHHHHH
Confidence               1135678999999998874

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.92  E-value=6.3e-24  Score=180.04  Aligned_cols=208  Identities=14%  Similarity=0.079  Sum_probs=148.0

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc---CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+..+.... +...   ..++.++.+|++|.+++.++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            468999999999999999999999999999998888764433222 1111   1247889999999988887764     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---  163 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  163 (259)
                        .+|+|||+|+..   .+...  +.....+++|+.++.++++++.+..   ..        ++||++||..++.+.   
T Consensus        77 --~~d~Vih~A~~~---~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~--------~riV~~SS~~~~~~~~~~  138 (337)
T 2c29_D           77 --GCTGVFHVATPM---DFESK--DPENEVIKPTIEGMLGIMKSCAAAK---TV--------RRLVFTSSAGTVNIQEHQ  138 (337)
T ss_dssp             --TCSEEEECCCCC---CSSCS--SHHHHTHHHHHHHHHHHHHHHHHHS---CC--------CEEEEECCGGGTSCSSSC
T ss_pred             --CCCEEEEecccc---CCCCC--ChHHHHHHHHHHHHHHHHHHHHhCC---Cc--------cEEEEeeeHhhcccCCCC
Confidence              589999999853   12112  2235688999999999999987642   12        679999998754321   


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHH----
Q 024976          164 -------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK----  220 (259)
Q Consensus       164 -------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~----  220 (259)
                                         +....|+.||.+.+.+++.++.+.    |++++.++|+.+.++.....+.. .....    
T Consensus       139 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~~lrp~~v~Gp~~~~~~~~-~~~~~~~~~  213 (337)
T 2c29_D          139 LPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN----NIDFITIIPTLVVGPFIMSSMPP-SLITALSPI  213 (337)
T ss_dssp             CSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEECEEESCCSCSSCCH-HHHHHTHHH
T ss_pred             CcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCCc-hHHHHHHHH
Confidence                               122369999999999988776554    59999999999998764433322 11111    


Q ss_pred             -----hhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          221 -----ATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       221 -----~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                           .....+..++..++|+++++++++..
T Consensus       214 ~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  244 (337)
T 2c29_D          214 TGNEAHYSIIRQGQFVHLDDLCNAHIYLFEN  244 (337)
T ss_dssp             HTCGGGHHHHTEEEEEEHHHHHHHHHHHHHC
T ss_pred             cCCCccccccCCCCEEEHHHHHHHHHHHhcC
Confidence                 01111234588999999999999854

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.92  E-value=9.3e-24  Score=180.08  Aligned_cols=210  Identities=15%  Similarity=0.008  Sum_probs=155.7

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh----hHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT----VLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~----~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +++++++||||+|+||++++++|+++|++|++++|+..    .++.+.+.+... +.++.++.+|++|.+++.++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            56789999999999999999999999999999998753    233333222111 2468999999999998888775   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW  164 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
                          ++|+|||+||.....    .+.++++..+++|+.++.++++++.+.    +.        ++||++||...+.+.+
T Consensus       102 ----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~--------~~~v~~SS~~~~~~~~  161 (352)
T 1sb8_A          102 ----GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----KV--------QSFTYAASSSTYGDHP  161 (352)
T ss_dssp             ----TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----TC--------SEEEEEEEGGGGTTCC
T ss_pred             ----CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEeccHHhcCCCC
Confidence                799999999963211    134567889999999999999998752    22        7899999987764432


Q ss_pred             -----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----ChHHHHHHhhhhcc---
Q 024976          165 -----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMA---  226 (259)
Q Consensus       165 -----------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~~~---  226 (259)
                                 +...|+.+|.+.+.+++.++.++    |++++.++||.+.++......    .............+   
T Consensus       162 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (352)
T 1sb8_A          162 GLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYI  237 (352)
T ss_dssp             CSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEE
T ss_pred             CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEE
Confidence                       35689999999999999998876    499999999999977543221    01122222222111   


Q ss_pred             ------CCCCCCHHHHHHHHHHhcCc
Q 024976          227 ------AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 ------~~~~~~~~dva~~~~~l~s~  246 (259)
                            ...+..++|+|+++++++..
T Consensus       238 ~g~g~~~~~~i~v~Dva~a~~~~~~~  263 (352)
T 1sb8_A          238 NGDGETSRDFCYIENTVQANLLAATA  263 (352)
T ss_dssp             ESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             eCCCCceEeeEEHHHHHHHHHHHHhc
Confidence                  12467899999999988864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.91  E-value=7.1e-24  Score=179.88  Aligned_cols=198  Identities=11%  Similarity=0.039  Sum_probs=144.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++||||+|+||++++++|+++|++|++++|+.+..+.+    ..  .++.++.+|++|.+++.++++       ++|+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~   80 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY--LEPECRVAEMLDHAGLERALR-------GLDG   80 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG--GCCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc--CCeEEEEecCCCHHHHHHHHc-------CCCE
Confidence            4899999999999999999999999999999986653321    11  258899999999998887764       6999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-------  165 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  165 (259)
                      |||+||...      ...++++..+++|+.++.++++++.+.    +.        ++||++||...+.+.+.       
T Consensus        81 vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~--------~~~v~~SS~~~~~~~~~~~~~~E~  142 (342)
T 2x4g_A           81 VIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----RV--------PRILYVGSAYAMPRHPQGLPGHEG  142 (342)
T ss_dssp             EEEC------------------CHHHHHHHHHHHHHHHHHHH----TC--------SCEEEECCGGGSCCCTTSSCBCTT
T ss_pred             EEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CC--------CeEEEECCHHhhCcCCCCCCCCCC
Confidence            999999542      234567889999999999999999874    22        67999999887654433       


Q ss_pred             ---------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc-cCCCChHHHHHHhhhhcc----CC--C
Q 024976          166 ---------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG-VSKLAPEEIRSKATDYMA----AY--K  229 (259)
Q Consensus       166 ---------~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~-~~~~~~~~~~~~~~~~~~----~~--~  229 (259)
                               ...|+.+|.+.+.+++.++.    . |++++.++||.+.++.. ... .+. .........+    ..  .
T Consensus       143 ~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~----~-g~~~~ilrp~~v~g~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~  215 (342)
T 2x4g_A          143 LFYDSLPSGKSSYVLCKWALDEQAREQAR----N-GLPVVIGIPGMVLGELDIGPT-TGR-VITAIGNGEMTHYVAGQRN  215 (342)
T ss_dssp             CCCSSCCTTSCHHHHHHHHHHHHHHHHHH----T-TCCEEEEEECEEECSCCSSCS-TTH-HHHHHHTTCCCEEECCEEE
T ss_pred             CCCCccccccChHHHHHHHHHHHHHHHhh----c-CCcEEEEeCCceECCCCcccc-HHH-HHHHHHcCCCccccCCCcc
Confidence                     66899999999999998875    3 69999999999997654 212 222 2222222111    12  2


Q ss_pred             CCCHHHHHHHHHHhcCccC
Q 024976          230 FGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       230 ~~~~~dva~~~~~l~s~~~  248 (259)
                      +.+++|+|+++++++....
T Consensus       216 ~i~v~Dva~~~~~~~~~~~  234 (342)
T 2x4g_A          216 VIDAAEAGRGLLMALERGR  234 (342)
T ss_dssp             EEEHHHHHHHHHHHHHHSC
T ss_pred             eeeHHHHHHHHHHHHhCCC
Confidence            6689999999999987543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=5.7e-23  Score=178.16  Aligned_cols=178  Identities=14%  Similarity=0.121  Sum_probs=135.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHH-----------------HHHHHHHhcCCCeEEEEcCCCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR-----------------SAVAALHSLGIPAIGLEGDVRK   72 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~-----------------~~~~~~~~~~~~v~~~~~Dl~~   72 (259)
                      ..++++|||||+|.||++++++|+++|++|++++|+.....                 ...+.....+.++.++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            46789999999999999999999999999999998754321                 1111111124568899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEE
Q 024976           73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII  152 (259)
Q Consensus        73 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv  152 (259)
                      .+++.++++..     ++|+|||+||...... ...+++++...+++|+.++.++++++.+.    +.       +.+||
T Consensus        89 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~-------~~~~V  151 (404)
T 1i24_A           89 FEFLAESFKSF-----EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GE-------ECHLV  151 (404)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CT-------TCEEE
T ss_pred             HHHHHHHHhcc-----CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHh----CC-------CcEEE
Confidence            99999988765     6999999999643211 12256677889999999999999998753    11       14799


Q ss_pred             Eeccccccc------------------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc
Q 024976          153 NISATLHYT------------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  208 (259)
Q Consensus       153 ~isS~~~~~------------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~  208 (259)
                      ++||...+.                        +..+...|+.||.+.+.+++.++.++    |++++.++||.+.++..
T Consensus       152 ~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          152 KLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             EECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSCC
T ss_pred             EeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc----CCeEEEEecceeeCCCC
Confidence            999976542                        22345679999999999999998876    49999999999997753

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.91  E-value=2e-23  Score=177.17  Aligned_cols=214  Identities=18%  Similarity=0.134  Sum_probs=150.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH-HHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+..+. ..+.+. ...++.++.+|++|.+++.++++.+     +
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   75 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV-----Q   75 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence            57899999999999999999999999999999998654321 112211 1246889999999999999998765     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc---------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY---------  160 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------  160 (259)
                      +|+||||||....    +.+.++++..+++|+.+++++++++... ..          .++||++||...+         
T Consensus        76 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~----------~~~iv~~SS~~vyg~~~~~~~~  140 (345)
T 2z1m_A           76 PDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTV-KP----------DTKFYQASTSEMFGKVQEIPQT  140 (345)
T ss_dssp             CSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT----------TCEEEEEEEGGGGCSCSSSSBC
T ss_pred             CCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC----------CceEEEEechhhcCCCCCCCCC
Confidence            9999999996421    1223567889999999999999999853 11          1689999998643         


Q ss_pred             --ccCccchhhHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEecccccCCcccCCCChHHHHHHhhh--------hccCC
Q 024976          161 --TATWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD--------YMAAY  228 (259)
Q Consensus       161 --~~~~~~~~Y~~sK~a~~~l~~~la~e~~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--------~~~~~  228 (259)
                        .+..+...|+.+|.+.+.+++.++.+++-  ..++.++.+.||...+... ..+ ..........        ..+..
T Consensus       141 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~  218 (345)
T 2z1m_A          141 EKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVT-RKI-TYSLARIKYGLQDKLVLGNLNAK  218 (345)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHH-HHH-HHHHHHHHTTSCSCEEESCTTCE
T ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchh-HHH-HHHHHHHHcCCCCeeeeCCCCce
Confidence              23345678999999999999999988741  1134566667776653211 000 0111110011        01112


Q ss_pred             C-CCCHHHHHHHHHHhcCcc
Q 024976          229 K-FGEKWDIAMAALYLASDA  247 (259)
Q Consensus       229 ~-~~~~~dva~~~~~l~s~~  247 (259)
                      + +.+++|+|++++++++..
T Consensus       219 ~~~~~v~Dva~a~~~~~~~~  238 (345)
T 2z1m_A          219 RDWGYAPEYVEAMWLMMQQP  238 (345)
T ss_dssp             ECCEEHHHHHHHHHHHHTSS
T ss_pred             eeeEEHHHHHHHHHHHHhCC
Confidence            2 788999999999999754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.91  E-value=1.7e-23  Score=177.86  Aligned_cols=218  Identities=14%  Similarity=0.024  Sum_probs=149.2

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhh-HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      +.++++.+++++||||+|+||++++++|+++|  ++|+.++|.... .....+.+ ....++.++.+|++|.+++.++++
T Consensus        17 n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~   95 (346)
T 4egb_A           17 NLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHVIK   95 (346)
T ss_dssp             -------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHH
T ss_pred             ccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHh
Confidence            33455778999999999999999999999999  667777775421 11111111 112479999999999999999987


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        82 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      ..     ++|+|||+||.....    ...++++..+++|+.++.++++++...    +.        ++||++||...+.
T Consensus        96 ~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~--------~~~v~~SS~~vy~  154 (346)
T 4egb_A           96 ER-----DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELVKKY----PH--------IKLVQVSTDEVYG  154 (346)
T ss_dssp             HH-----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHS----TT--------SEEEEEEEGGGGC
T ss_pred             hc-----CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHHHhc----CC--------CEEEEeCchHHhC
Confidence            63     699999999975432    244667889999999999999888643    22        6799999976554


Q ss_pred             cC------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccC--
Q 024976          162 AT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--  227 (259)
Q Consensus       162 ~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--  227 (259)
                      ..            .+...|+.+|.+.+.+++.++.++    |++++.++|+.+.++...................+.  
T Consensus       155 ~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  230 (346)
T 4egb_A          155 SLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY----QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPL  230 (346)
T ss_dssp             CCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEE
T ss_pred             CCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCcee
Confidence            32            124679999999999999998876    499999999999876543322222333322222211  


Q ss_pred             -------CCCCCHHHHHHHHHHhcCccC
Q 024976          228 -------YKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       228 -------~~~~~~~dva~~~~~l~s~~~  248 (259)
                             ..+...+|+|+++++++....
T Consensus       231 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~  258 (346)
T 4egb_A          231 YGDGLNVRDWLHVTDHCSAIDVVLHKGR  258 (346)
T ss_dssp             ETTSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred             eCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence                   123568999999999986543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.90  E-value=2e-23  Score=178.69  Aligned_cols=209  Identities=15%  Similarity=0.082  Sum_probs=146.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHH--cCCeEEEEeCChhhHHHH-------HHHHHhcCCCeEEEEcCCCCHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGK--HGAAIAIMGRRKTVLRSA-------VAALHSLGIPAIGLEGDVRKREDAVR   78 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~--~G~~vv~~~r~~~~~~~~-------~~~~~~~~~~v~~~~~Dl~~~~~~~~   78 (259)
                      +++++|+++||||+|+||++++++|++  +|++|++++|+.......       .+.....+.++.++.+|++|.+++++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            467899999999999999999999999  999999999875421100       00011124467899999999999887


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      +      ...++|+|||+||....      +.++++..+++|+.++.++++++..    .+         ++||++||..
T Consensus        86 ~------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~~---------~~~V~~SS~~  140 (362)
T 3sxp_A           86 L------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----KK---------AKVIYASSAG  140 (362)
T ss_dssp             H------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----TT---------CEEEEEEEGG
T ss_pred             h------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----cC---------CcEEEeCcHH
Confidence            6      23589999999995322      3456789999999999999999842    22         5599999965


Q ss_pred             ccccC----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC----CChHHHHHHhhhh
Q 024976          159 HYTAT----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDY  224 (259)
Q Consensus       159 ~~~~~----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~~~~~  224 (259)
                      .+...          .+...|+.+|.+.+.+++.++.+      +++..++|+.+..+.....    .............
T Consensus       141 vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  214 (362)
T 3sxp_A          141 VYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND------NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAF  214 (362)
T ss_dssp             GGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT------SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTT
T ss_pred             HhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc------CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhC
Confidence            54322          22346999999999998877544      5677788877775543221    1112222222221


Q ss_pred             cc---------CCCCCCHHHHHHHHHHhcCcc
Q 024976          225 MA---------AYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       225 ~~---------~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .+         ...+..++|+|+++++++...
T Consensus       215 ~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~  246 (362)
T 3sxp_A          215 KEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ  246 (362)
T ss_dssp             SEEECSGGGCCEEECEEHHHHHHHHHHHTTCS
T ss_pred             CCeEEECCCCeEEccEEHHHHHHHHHHHHhcC
Confidence            11         123567999999999999765

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.90  E-value=4.8e-23  Score=162.30  Aligned_cols=195  Identities=16%  Similarity=0.114  Sum_probs=142.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++++||||+|+||++++++|+++|++|++++|+.+..+..      ...++.++.+|++|++++.++++       .+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   69 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------CCC
Confidence            37999999999999999999999999999999987653211      13468899999999999888765       589


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc----cch
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQI  167 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----~~~  167 (259)
                      +|||++|.....     ++      .++|+.++..+++++..    .+.        ++||++||...+...+    ...
T Consensus        70 ~vi~~a~~~~~~-----~~------~~~n~~~~~~~~~~~~~----~~~--------~~~v~~Ss~~~~~~~~~~~~~~~  126 (206)
T 1hdo_A           70 AVIVLLGTRNDL-----SP------TTVMSEGARNIVAAMKA----HGV--------DKVVACTSAFLLWDPTKVPPRLQ  126 (206)
T ss_dssp             EEEECCCCTTCC-----SC------CCHHHHHHHHHHHHHHH----HTC--------CEEEEECCGGGTSCTTCSCGGGH
T ss_pred             EEEECccCCCCC-----Cc------cchHHHHHHHHHHHHHH----hCC--------CeEEEEeeeeeccCcccccccch
Confidence            999999964331     11      23777787777777654    232        6899999987665444    567


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+.+|.+++.+.+        ..|++++.++||.+........+..     .+ ...|.+++.+++|+|+++++++.++
T Consensus       127 ~y~~~K~~~e~~~~--------~~~i~~~~lrp~~~~~~~~~~~~~~-----~~-~~~~~~~~i~~~Dva~~~~~~~~~~  192 (206)
T 1hdo_A          127 AVTDDHIRMHKVLR--------ESGLKYVAVMPPHIGDQPLTGAYTV-----TL-DGRGPSRVISKHDLGHFMLRCLTTD  192 (206)
T ss_dssp             HHHHHHHHHHHHHH--------HTCSEEEEECCSEEECCCCCSCCEE-----ES-SSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred             hHHHHHHHHHHHHH--------hCCCCEEEEeCCcccCCCCCcceEe-----cc-cCCCCCCccCHHHHHHHHHHHhcCc
Confidence            89999999998874        2469999999999832222111110     01 1122246788999999999999764


Q ss_pred             CCccccccccc
Q 024976          248 AVHRDLIHLLD  258 (259)
Q Consensus       248 ~~~~tG~~i~~  258 (259)
                      .  .+|+.+.+
T Consensus       193 ~--~~g~~~~i  201 (206)
T 1hdo_A          193 E--YDGHSTYP  201 (206)
T ss_dssp             T--TTTCEEEE
T ss_pred             c--ccccceee
Confidence            3  57776654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.90  E-value=2.3e-23  Score=179.30  Aligned_cols=209  Identities=11%  Similarity=-0.026  Sum_probs=150.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..+++++++||||+|+||++++++|+++| ++|++++|+......   .+. ...++.++.+|++|.++++++++     
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~-----   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD-----   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS-----
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh-----
Confidence            34788999999999999999999999999 999999987543211   111 13468899999999988777654     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhc-CCCCCCCCCCceEEEeccccccc----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG-GRGQASSSSGGIIINISATLHYT----  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~~g~iv~isS~~~~~----  161 (259)
                        ++|+|||+||.....    .+.++++..+++|+.++.++++++.    +. +.        ++||++||...+.    
T Consensus        99 --~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~--------~~~V~~SS~~vyg~~~~  160 (377)
T 2q1s_A           99 --EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLK----HFKRL--------KKVVYSAAGCSIAEKTF  160 (377)
T ss_dssp             --CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHT----TCSSC--------CEEEEEEEC--------
T ss_pred             --CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HhCCC--------CeEEEeCCHHHcCCCCC
Confidence              799999999963211    2335678899999999999998874    22 22        6899999976431    


Q ss_pred             ------------cC-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc---------cC----CCChH
Q 024976          162 ------------AT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG---------VS----KLAPE  215 (259)
Q Consensus       162 ------------~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~---------~~----~~~~~  215 (259)
                                  +. .+...|+.+|.+.+.+++.++.++    |++++.++||.+.++..         ..    .....
T Consensus       161 ~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~  236 (377)
T 2q1s_A          161 DDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH----QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTP  236 (377)
T ss_dssp             ------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHH
T ss_pred             CCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh----CCCEEEEeeccEECCCCcccccccccCcccccccHHH
Confidence                        22 345689999999999999998876    49999999999987654         11    11112


Q ss_pred             HHHHHhhhhccC---------CCCCCHHHHHHH-HHHhcCcc
Q 024976          216 EIRSKATDYMAA---------YKFGEKWDIAMA-ALYLASDA  247 (259)
Q Consensus       216 ~~~~~~~~~~~~---------~~~~~~~dva~~-~~~l~s~~  247 (259)
                      ..........+.         ..+...+|+|++ +++++...
T Consensus       237 ~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~  278 (377)
T 2q1s_A          237 TFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGT  278 (377)
T ss_dssp             HHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcC
Confidence            222222222221         135568999999 99988653

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.90  E-value=4.6e-23  Score=174.56  Aligned_cols=204  Identities=17%  Similarity=0.055  Sum_probs=142.8

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ...+++++++||||+|+||++++++|+++|++|++++|+.....+.   +... .++.++.+|++|.++++++++.    
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~-~~~~~~~~Dl~d~~~~~~~~~~----   87 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH-PNLTFVEGSIADHALVNQLIGD----   87 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC-TTEEEEECCTTCHHHHHHHHHH----
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc-CCceEEEEeCCCHHHHHHHHhc----
Confidence            3457889999999999999999999999999999999875432111   1111 3688999999999999988875    


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----c
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----A  162 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~  162 (259)
                       +++|+|||+||.....     +.++++  +++|+.++.++++++.+.    +.        ++||++||...+.    .
T Consensus        88 -~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~~--------~~iV~~SS~~~~g~~~~~  147 (333)
T 2q1w_A           88 -LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKKN----NV--------GRFVYFQTALCYGVKPIQ  147 (333)
T ss_dssp             -HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHT----TC--------SEEEEEEEGGGGCSCCCS
T ss_pred             -cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHHh----CC--------CEEEEECcHHHhCCCccc
Confidence             2799999999965432     334555  999999999999999762    22        7899999977654    2


Q ss_pred             C--------ccc-hhhHHHHHHHHHHHHH-HHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhh------hcc
Q 024976          163 T--------WYQ-IHVSAAKAAVDSITRS-LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD------YMA  226 (259)
Q Consensus       163 ~--------~~~-~~Y~~sK~a~~~l~~~-la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~------~~~  226 (259)
                      .        .+. ..|+.+|++.+.+++. ++         ++..++|+.+..+.......+ ........      ..+
T Consensus       148 ~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~---------~~~ilR~~~v~gp~~~~~~~~-~~~~~~~~~~~~~~~~~  217 (333)
T 2q1w_A          148 QPVRLDHPRNPANSSYAISKSANEDYLEYSGL---------DFVTFRLANVVGPRNVSGPLP-IFFQRLSEGKKCFVTKA  217 (333)
T ss_dssp             SSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC---------CEEEEEESEEESTTCCSSHHH-HHHHHHHTTCCCEEEEC
T ss_pred             CCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC---------CeEEEeeceEECcCCcCcHHH-HHHHHHHcCCeeeCCCc
Confidence            1        233 7899999999999886 53         456777777765541111111 11111111      122


Q ss_pred             CCCCCCHHHHHHHHHHhcCccC
Q 024976          227 AYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      ...+..++|+|++++++++...
T Consensus       218 ~~~~i~v~Dva~ai~~~~~~~~  239 (333)
T 2q1w_A          218 RRDFVFVKDLARATVRAVDGVG  239 (333)
T ss_dssp             EECEEEHHHHHHHHHHHHTTCC
T ss_pred             eEeeEEHHHHHHHHHHHHhcCC
Confidence            3457789999999999997643

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.90  E-value=2.7e-23  Score=176.81  Aligned_cols=212  Identities=17%  Similarity=0.127  Sum_probs=153.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHc--CCeEEEEeCChhh-HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           13 KVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~--G~~vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      |+++||||+|+||++++++|+++  |++|++++|+... .....+++  .+.++.++.+|++|.+++.++++       .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------K   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------c
Confidence            68999999999999999999999  8999999986421 11111111  13468999999999998888775       4


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------  161 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  161 (259)
                      +|+|||+||....    +.+.++++..+++|+.++.++++++.+.    +         ++||++||...+.        
T Consensus        76 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~---------~~~v~~SS~~vyg~~~~~~~~  138 (348)
T 1oc2_A           76 ADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D---------IRFHHVSTDEVYGDLPLREDL  138 (348)
T ss_dssp             CSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T---------CEEEEEEEGGGGCCBCCGGGS
T ss_pred             CCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C---------CeEEEecccceeCCCcccccc
Confidence            6999999996421    1233556789999999999999999875    1         5799999976432        


Q ss_pred             ---------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhc-
Q 024976          162 ---------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM-  225 (259)
Q Consensus       162 ---------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-  225 (259)
                                     +..+...|+.+|.+.+.+++.++.++    |++++.++||.+.++................... 
T Consensus       139 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~  214 (348)
T 1oc2_A          139 PGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIK  214 (348)
T ss_dssp             TTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCC
T ss_pred             cccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCC
Confidence                           22345689999999999999998876    4999999999998776432111122222221111 


Q ss_pred             --------cCCCCCCHHHHHHHHHHhcCccCCcccccccc
Q 024976          226 --------AAYKFGEKWDIAMAALYLASDAAVHRDLIHLL  257 (259)
Q Consensus       226 --------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~  257 (259)
                              +...+.+++|+|++++++++..   .+|+.+.
T Consensus       215 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~  251 (348)
T 1oc2_A          215 PKLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYL  251 (348)
T ss_dssp             CEEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEE
T ss_pred             ceEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEE
Confidence                    1224678999999999998653   2455443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.90  E-value=6.6e-24  Score=177.93  Aligned_cols=199  Identities=17%  Similarity=0.053  Sum_probs=148.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++||||+|+||++++++|+++|++|++++|+.+.....      ....+.++.+|++|.+ +.++++       . |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~~-------~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGIK-------G-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTCC-------C-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhcC-------C-CE
Confidence            4799999999999999999999999999999876542221      1346889999999987 655443       3 99


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------  161 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------  161 (259)
                      |||+||...    ...+.+++...+++|+.++.++++++...    +.        ++||++||...+.           
T Consensus        66 vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~--------~~iv~~SS~~vyg~~~~~~~~e~~  129 (312)
T 3ko8_A           66 VFHFAANPE----VRLSTTEPIVHFNENVVATFNVLEWARQT----GV--------RTVVFASSSTVYGDADVIPTPEEE  129 (312)
T ss_dssp             EEECCSSCS----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----TC--------CEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             EEECCCCCC----chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEeCcHHHhCCCCCCCCCCCC
Confidence            999999532    23455667889999999999999988542    22        6899999977652           


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc---------CCCCCC
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA---------AYKFGE  232 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  232 (259)
                      +..+...|+.+|.+.+.+++.++.++    |++++.++||.+.++...................+         ...+..
T Consensus       130 ~~~p~~~Y~~sK~~~e~~~~~~~~~~----g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  205 (312)
T 3ko8_A          130 PYKPISVYGAAKAAGEVMCATYARLF----GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLY  205 (312)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEE
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh----CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEE
Confidence            23346789999999999999999887    49999999999997764433222222221111111         123566


Q ss_pred             HHHHHHHHHHhcCc
Q 024976          233 KWDIAMAALYLASD  246 (259)
Q Consensus       233 ~~dva~~~~~l~s~  246 (259)
                      ++|+|+++++++..
T Consensus       206 v~Dva~a~~~~~~~  219 (312)
T 3ko8_A          206 VRDAVEATLAAWKK  219 (312)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999865

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.90  E-value=4.8e-23  Score=180.18  Aligned_cols=207  Identities=14%  Similarity=0.025  Sum_probs=147.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh---hHHHHHHHHHh---------cCCCeEEEEcCCCCHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT---VLRSAVAALHS---------LGIPAIGLEGDVRKREDA   76 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~---~~~~~~~~~~~---------~~~~v~~~~~Dl~~~~~~   76 (259)
                      ...+|+++||||+|+||++++++|+++|++|++++|+.+   ..+.+.+.+..         ...++.++.+|++|.+++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            456789999999999999999999999999999999876   33444443322         135799999999998887


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 024976           77 VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA  156 (259)
Q Consensus        77 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS  156 (259)
                      .        .++++|+||||||...       ..++++..+++|+.++.++++++.+     .        ..+||++||
T Consensus       146 ~--------~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~--------~~~~v~~SS  197 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H--------HARLIYVST  197 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----T--------TCEEEEEEE
T ss_pred             C--------CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----c--------CCcEEEECc
Confidence            7        4578999999999642       2356788999999999999999976     1        167999999


Q ss_pred             ccc------------------cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh----
Q 024976          157 TLH------------------YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP----  214 (259)
Q Consensus       157 ~~~------------------~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~----  214 (259)
                      ...                  ..+..+...|+.+|.+.+.+++.++.     .|++++.++||.+.++........    
T Consensus       198 ~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~g~~~~ivRpg~v~G~~~~~~~~~~~~~  272 (427)
T 4f6c_A          198 ISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-----NGLDGRIVRVGNLTSPYNGRWHMRNIKT  272 (427)
T ss_dssp             GGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-----TTCCEEEEEECCEESCSSSCCCCTTGGG
T ss_pred             hHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH-----cCCCEEEEeCCeeecCCCCCccccCcch
Confidence            876                  00122567899999999999998643     469999999999987654433211    


Q ss_pred             ---HHHHHHhhhh--cc------CCCCCCHHHHHHHHHHhcCccC
Q 024976          215 ---EEIRSKATDY--MA------AYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       215 ---~~~~~~~~~~--~~------~~~~~~~~dva~~~~~l~s~~~  248 (259)
                         ..........  .+      ...+...+|+|+++++++....
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~  317 (427)
T 4f6c_A          273 NRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT  317 (427)
T ss_dssp             CHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC
Confidence               1122221111  11      1236778999999999997644

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.90  E-value=1.9e-22  Score=173.75  Aligned_cols=215  Identities=14%  Similarity=0.060  Sum_probs=150.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-----HHHHHHHHHhcCC-CeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-----~~~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      |+++||||+|+||++++++|+++|++|++++|+.+.     ++...+++...+. ++.++.+|++|.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999987543     2222222221223 6889999999999999988765   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  161 (259)
                        ++|+|||+||....    ..+.++++..+++|+.++.++++++.+...+++.       .++||++||...+.     
T Consensus       106 --~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~-------~~~~v~~SS~~vyg~~~~~  172 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-------TVKYYQAGSSEMFGSTPPP  172 (381)
T ss_dssp             --CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-------CCEEEEEEEGGGGTTSCSS
T ss_pred             --CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC-------ccEEEEeCcHHHhCCCCCC
Confidence              69999999996432    1234668889999999999999999998765321       26899999987553     


Q ss_pred             -----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH---HHHHHh-hhh--------
Q 024976          162 -----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKA-TDY--------  224 (259)
Q Consensus       162 -----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~-~~~--------  224 (259)
                           +..+...|+.+|.+.+.+++.++.+++    +.+..+.|..+..+.........   ...... ...        
T Consensus       173 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  248 (381)
T 1n7h_A          173 QSETTPFHPRSPYAASKCAAHWYTVNYREAYG----LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGN  248 (381)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESC
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC----CcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCC
Confidence                 234467899999999999999998874    55555555444433221111111   111111 110        


Q ss_pred             -ccCCCCCCHHHHHHHHHHhcCcc
Q 024976          225 -MAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       225 -~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                       .+...+..++|+|+++++++...
T Consensus       249 ~~~~~~~v~v~Dva~a~~~~~~~~  272 (381)
T 1n7h_A          249 LQASRDWGFAGDYVEAMWLMLQQE  272 (381)
T ss_dssp             TTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             CCceeeeEEHHHHHHHHHHHHhCC
Confidence             11124678999999999998754

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.90  E-value=5.2e-22  Score=170.29  Aligned_cols=213  Identities=15%  Similarity=0.078  Sum_probs=145.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHH-HHHHHHHh----cCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR-SAVAALHS----LGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~-~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +|+++||||+|+||++++++|+++|++|++++|+.+... ...+.+..    .+.++.++.+|++|.+++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            378999999999999999999999999999999765321 11112211    1356889999999999999998765   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----  162 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  162 (259)
                        ++|+||||||.....    .+.++++..+++|+.++.++++++.+...++         +++||++||...+..    
T Consensus        78 --~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~~~iv~~SS~~v~g~~~~~  142 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLEK---------KTRFYQASTSELYGLVQEI  142 (372)
T ss_dssp             --CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGGTTCCSS
T ss_pred             --CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCC---------CcEEEEeCChhhhCCCCCC
Confidence              699999999964322    2345677889999999999999998754321         278999999765532    


Q ss_pred             -------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH---HHHHHhh-hhc---c--
Q 024976          163 -------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKAT-DYM---A--  226 (259)
Q Consensus       163 -------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~-~~~---~--  226 (259)
                             ..+...|+.+|++.+.+++.++.+++    +.+..+.|..+..+.........   ....... ...   .  
T Consensus       143 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (372)
T 1db3_A          143 PQKETTPFYPRSPYAVAKLYAYWITVNYRESYG----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG  218 (372)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEES
T ss_pred             CCCccCCCCCCChHHHHHHHHHHHHHHHHHHhC----CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeec
Confidence                   12356899999999999999998874    66666776666544322211111   1111111 110   1  


Q ss_pred             ----CCCCCCHHHHHHHHHHhcCc
Q 024976          227 ----AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 ----~~~~~~~~dva~~~~~l~s~  246 (259)
                          ...+...+|++++++.++..
T Consensus       219 ~~~~~~~~i~v~Dva~a~~~~~~~  242 (372)
T 1db3_A          219 NMDSLRDWGHAKDYVKMQWMMLQQ  242 (372)
T ss_dssp             CTTCEECCEEHHHHHHHHHHTTSS
T ss_pred             CCCceeeeeEHHHHHHHHHHHHhc
Confidence                11367799999999998854

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.89  E-value=4.7e-23  Score=172.75  Aligned_cols=202  Identities=16%  Similarity=0.116  Sum_probs=147.0

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||+|+||++++++|+++|++|++++|.......      ....++.++.+|++|.+++.+++++.     ++|+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~v   70 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFREF-----RPTHV   70 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999999999999885332110      11135778999999999999888652     69999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc-cccc------c----
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LHYT------A----  162 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~~------~----  162 (259)
                      ||+|+....    ..+.+++...+++|+.+++++++++..    .+.        ++||++||. ..+.      +    
T Consensus        71 i~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~--------~~iv~~SS~~~~~g~~~~~~~~~E~  134 (311)
T 2p5y_A           71 SHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGV--------EKLVFASTGGAIYGEVPEGERAEET  134 (311)
T ss_dssp             EECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTC--------SEEEEEEEHHHHHCCCCTTCCBCTT
T ss_pred             EECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCC--------CEEEEeCCChhhcCCCCCCCCcCCC
Confidence            999995321    123456788999999999999998853    222        689999997 3221      1    


Q ss_pred             --CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh---HHHHHHhhhhc------------
Q 024976          163 --TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDYM------------  225 (259)
Q Consensus       163 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~~~~~~~~~~------------  225 (259)
                        ..+...|+.+|++++.+++.++.++    |++++.++|+.+.++........   ...........            
T Consensus       135 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (311)
T 2p5y_A          135 WPPRPKSPYAASKAAFEHYLSVYGQSY----GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGD  210 (311)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTS
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHc----CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCC
Confidence              1245689999999999999998876    49999999999997754322111   11222111111            


Q ss_pred             --cCCCCCCHHHHHHHHHHhcCc
Q 024976          226 --AAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       226 --~~~~~~~~~dva~~~~~l~s~  246 (259)
                        +...+..++|+++++++++..
T Consensus       211 g~~~~~~i~v~Dva~a~~~~~~~  233 (311)
T 2p5y_A          211 EGCVRDYVYVGDVAEAHALALFS  233 (311)
T ss_dssp             CCCEECEEEHHHHHHHHHHHHHH
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhC
Confidence              112456799999999998864

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.89  E-value=1.8e-22  Score=171.96  Aligned_cols=211  Identities=14%  Similarity=0.032  Sum_probs=156.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-----CCeEEEEcCCCCHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-----IPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ++++|+++||||+|+||++++++|+++|++|++++|+........+.+....     .++.++.+|++|.+++.++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            3578999999999999999999999999999999997654444444443321     469999999999999888775  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                           ++|+|||+||....    ....+++...+++|+.++.++++++...    +.        .+||++||...+...
T Consensus       100 -----~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~--------~~~v~~SS~~vyg~~  158 (351)
T 3ruf_A          100 -----GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKNA----QV--------QSFTYAASSSTYGDH  158 (351)
T ss_dssp             -----TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TC--------SEEEEEEEGGGGTTC
T ss_pred             -----CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEEecHHhcCCC
Confidence                 79999999995322    1234557788999999999999988643    22        679999998765332


Q ss_pred             -----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----ChHHHHHHhhhhcc--
Q 024976          164 -----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMA--  226 (259)
Q Consensus       164 -----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~~~--  226 (259)
                                 .+...|+.+|.+.+.+++.++.++    |++++.++|+.+.++......    .-..+........+  
T Consensus       159 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (351)
T 3ruf_A          159 PALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY----GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVY  234 (351)
T ss_dssp             CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCE
T ss_pred             CCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcE
Confidence                       224679999999999999998876    499999999999876543321    11222222222111  


Q ss_pred             -------CCCCCCHHHHHHHHHHhcCc
Q 024976          227 -------AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 -------~~~~~~~~dva~~~~~l~s~  246 (259)
                             ...+...+|+|++++.++..
T Consensus       235 ~~g~g~~~~~~i~v~Dva~a~~~~~~~  261 (351)
T 3ruf_A          235 INGDGETSRDFCYIDNVIQMNILSALA  261 (351)
T ss_dssp             EESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             EeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence                   11356799999999988765

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.89  E-value=1.6e-22  Score=172.00  Aligned_cols=157  Identities=12%  Similarity=0.063  Sum_probs=126.3

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ...+++|++|||||+|+||++++++|+++|++|++++|+.+.            .++.++.+|++|.+++.++++     
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~-----   76 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM-----   76 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT-----
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh-----
Confidence            356888999999999999999999999999999999998754            358899999999999888775     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----  162 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  162 (259)
                        ++|+|||+|+...      .+.++++..+++|+.++.++++++..    .+.        ++||++||...+..    
T Consensus        77 --~~d~vih~A~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~--------~~~V~~SS~~vyg~~~~~  136 (347)
T 4id9_A           77 --GVSAVLHLGAFMS------WAPADRDRMFAVNVEGTRRLLDAASA----AGV--------RRFVFASSGEVYPENRPE  136 (347)
T ss_dssp             --TCSEEEECCCCCC------SSGGGHHHHHHHHTHHHHHHHHHHHH----TTC--------SEEEEEEEGGGTTTTSCS
T ss_pred             --CCCEEEECCcccC------cchhhHHHHHHHHHHHHHHHHHHHHH----cCC--------CeEEEECCHHHhCCCCCC
Confidence              7999999999643      23455689999999999999998854    222        68999999655432    


Q ss_pred             ---------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeccccc
Q 024976          163 ---------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  204 (259)
Q Consensus       163 ---------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~  204 (259)
                               ..+...|+.+|.+.+.+++.++.+.    |++++.++|+.+.
T Consensus       137 ~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~  183 (347)
T 4id9_A          137 FLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG----AMETVILRFSHTQ  183 (347)
T ss_dssp             SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS----SSEEEEEEECEEE
T ss_pred             CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc----CCceEEEccceEe
Confidence                     2456679999999999999988874    5999999999997

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.89  E-value=3.2e-22  Score=169.79  Aligned_cols=213  Identities=15%  Similarity=0.078  Sum_probs=149.5

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcC-------CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHG-------AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRV   79 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   79 (259)
                      ...+++++++||||+|+||++++++|+++|       ++|++++|+.+....      ....++.++.+|++|.++++++
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHH
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHH
Confidence            345789999999999999999999999999       799999997643211      1244688999999999998887


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        80 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      ++      +++|+|||+||....     .+.++++..+++|+.++.++++++.+...+.+.       .++||++||...
T Consensus        83 ~~------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~-------~~~iv~~SS~~~  144 (342)
T 2hrz_A           83 VE------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGY-------KPRVVFTSSIAV  144 (342)
T ss_dssp             HH------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCC-------CCEEEEEEEGGG
T ss_pred             Hh------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCC-------CcEEEEeCchHh
Confidence            75      479999999996421     234678899999999999999999875433210       168999999876


Q ss_pred             cccC-c----------cchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEe--cccccCCcccCCCChHHHHHHhhhh-
Q 024976          160 YTAT-W----------YQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIA--PGPIKDTAGVSKLAPEEIRSKATDY-  224 (259)
Q Consensus       160 ~~~~-~----------~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~--pg~v~t~~~~~~~~~~~~~~~~~~~-  224 (259)
                      +.+. +          +...|+.+|.+.+.+++.++.+.. ....+|++.+.  ||...++.  ..+. .......... 
T Consensus       145 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~--~~~~-~~~~~~~~~~~  221 (342)
T 2hrz_A          145 FGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAA--SGFF-SNILREPLVGQ  221 (342)
T ss_dssp             CCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSG--GGHH-HHHHHHHHTTC
T ss_pred             hCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchh--HHHH-HHHHHHHhcCC
Confidence            6443 1          467899999999999998887642 12235555555  66543211  0111 1111111111 


Q ss_pred             ---ccCCC-----CCCHHHHHHHHHHhcCc
Q 024976          225 ---MAAYK-----FGEKWDIAMAALYLASD  246 (259)
Q Consensus       225 ---~~~~~-----~~~~~dva~~~~~l~s~  246 (259)
                         .+...     +..++|++++++.++..
T Consensus       222 ~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~  251 (342)
T 2hrz_A          222 EAVLPVPESIRHWHASPRSAVGFLIHGAMI  251 (342)
T ss_dssp             CEEECSCTTCEEEEECHHHHHHHHHHHHHS
T ss_pred             CeeccCCCccceeeEehHHHHHHHHHHHhc
Confidence               12221     45799999999988753

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.89  E-value=5.5e-23  Score=168.80  Aligned_cols=181  Identities=12%  Similarity=0.073  Sum_probs=141.9

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||+|+||++++++|+++|++|++++|+.....         ..++.++.+|++|.+++.++++       ++|+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   66 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK-------DCDG   66 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence            68999999999999999999999999999999865310         1357889999999999888775       5999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc--------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--------  164 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  164 (259)
                      ||||||..        +.++++..+++|+.++.++++++.+    .+.        ++||++||...+...+        
T Consensus        67 vi~~a~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~--------~~iv~~SS~~~~~~~~~~~~~~E~  126 (267)
T 3ay3_A           67 IIHLGGVS--------VERPWNDILQANIIGAYNLYEAARN----LGK--------PRIVFASSNHTIGYYPRTTRIDTE  126 (267)
T ss_dssp             EEECCSCC--------SCCCHHHHHHHTHHHHHHHHHHHHH----TTC--------CEEEEEEEGGGSTTSBTTSCBCTT
T ss_pred             EEECCcCC--------CCCCHHHHHHHHHHHHHHHHHHHHH----hCC--------CEEEEeCCHHHhCCCCCCCCCCCC
Confidence            99999964        1234678899999999999998864    222        7899999987664432        


Q ss_pred             ----cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          165 ----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       165 ----~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                          +...|+.+|++++.+++.++.    ..|++++.++||.+.....     ...   .      ...+.+++|+|+++
T Consensus       127 ~~~~~~~~Y~~sK~~~e~~~~~~~~----~~gi~~~~lrp~~v~~~~~-----~~~---~------~~~~~~~~dva~~~  188 (267)
T 3ay3_A          127 VPRRPDSLYGLSKCFGEDLASLYYH----KFDIETLNIRIGSCFPKPK-----DAR---M------MATWLSVDDFMRLM  188 (267)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHH----TTCCCEEEEEECBCSSSCC-----SHH---H------HHHBCCHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHH----HcCCCEEEEeceeecCCCC-----CCC---e------eeccccHHHHHHHH
Confidence                346899999999999998865    4469999999999852211     111   0      12357899999999


Q ss_pred             HHhcCcc
Q 024976          241 LYLASDA  247 (259)
Q Consensus       241 ~~l~s~~  247 (259)
                      +.++...
T Consensus       189 ~~~~~~~  195 (267)
T 3ay3_A          189 KRAFVAP  195 (267)
T ss_dssp             HHHHHSS
T ss_pred             HHHHhCC
Confidence            9988653

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.89  E-value=2e-22  Score=173.59  Aligned_cols=206  Identities=18%  Similarity=0.083  Sum_probs=151.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .++++++||||+|+||++++++|+++|++|++++|+.......      ...++.++.+|++|.+++.++++       +
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE-------G   93 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT-------T
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC-------C
Confidence            3568999999999999999999999999999999986542211      12358899999999999888774       6


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------  161 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  161 (259)
                      +|+|||+||......+   ..++++..+++|+.++.++++++..    .+.        ++||++||...+.        
T Consensus        94 ~d~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~--------~~~V~~SS~~v~~~~~~~~~~  158 (379)
T 2c5a_A           94 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARI----NGI--------KRFFYASSACIYPEFKQLETT  158 (379)
T ss_dssp             CSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHH----TTC--------SEEEEEEEGGGSCGGGSSSSS
T ss_pred             CCEEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHHH----cCC--------CEEEEEeehheeCCCCCCCcc
Confidence            9999999996432111   1245778899999999999998853    222        6899999976543        


Q ss_pred             ----------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----ChHHHHHHhhhh---
Q 024976          162 ----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDY---  224 (259)
Q Consensus       162 ----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~---  224 (259)
                                +..+...|+.+|.+.+.+++.++.++    |++++.++||.+.++......    ....+.......   
T Consensus       159 ~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (379)
T 2c5a_A          159 NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDR  234 (379)
T ss_dssp             SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSC
T ss_pred             CCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH----CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCc
Confidence                      22345689999999999999998875    499999999999876543211    112222222111   


Q ss_pred             c-------cCCCCCCHHHHHHHHHHhcCcc
Q 024976          225 M-------AAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       225 ~-------~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .       ....+..++|+|+++++++...
T Consensus       235 ~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~  264 (379)
T 2c5a_A          235 FEMWGDGLQTRSFTFIDECVEGVLRLTKSD  264 (379)
T ss_dssp             EEEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred             eEEeCCCCeeEEEEEHHHHHHHHHHHhhcc
Confidence            1       1124667999999999998653

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.89  E-value=5.7e-23  Score=172.88  Aligned_cols=206  Identities=13%  Similarity=0.038  Sum_probs=138.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeC-Chhh---HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTV---LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r-~~~~---~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+.   .... .++.....++.++.+|++|.++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            589999999999999999999999999999888 5432   1111 1111001247788999999998888765      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHH-HHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc--
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNG-FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--  164 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  164 (259)
                       .+|+|||+|+..   .   ...++ ++..+++|+.+++++++++.+..   +.        ++||++||..++.+.+  
T Consensus        74 -~~d~vih~A~~~---~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~--------~~iV~~SS~~~~~~~~~~  135 (322)
T 2p4h_X           74 -GCVGIFHTASPI---D---FAVSEPEEIVTKRTVDGALGILKACVNSK---TV--------KRFIYTSSGSAVSFNGKD  135 (322)
T ss_dssp             -TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS---SC--------CEEEEEEEGGGTSCSSSC
T ss_pred             -CCCEEEEcCCcc---c---CCCCChHHHHHHHHHHHHHHHHHHHHhcC---Cc--------cEEEEeccHHHcccCCCC
Confidence             589999999732   1   12222 35689999999999999986531   22        7899999987543221  


Q ss_pred             --------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHH--HHHHhh
Q 024976          165 --------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKAT  222 (259)
Q Consensus       165 --------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~  222 (259)
                                          ....|+.||.+.+.+++.++.+    .|++++.++||.+.++..........  ......
T Consensus       136 ~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~  211 (322)
T 2p4h_X          136 KDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ----NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVL  211 (322)
T ss_dssp             CSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHH
T ss_pred             CeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh----cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHh
Confidence                                0116999999887777665543    46999999999999775433322111  101111


Q ss_pred             h---hccCC--CCCCHHHHHHHHHHhcCc
Q 024976          223 D---YMAAY--KFGEKWDIAMAALYLASD  246 (259)
Q Consensus       223 ~---~~~~~--~~~~~~dva~~~~~l~s~  246 (259)
                      .   ..+..  .+.+++|+|+++++++..
T Consensus       212 g~~~~~~~~~~~~i~v~Dva~a~~~~~~~  240 (322)
T 2p4h_X          212 GKKEQIGVTRFHMVHVDDVARAHIYLLEN  240 (322)
T ss_dssp             SCGGGCCEEEEEEEEHHHHHHHHHHHHHS
T ss_pred             CCCccCcCCCcCEEEHHHHHHHHHHHhhC
Confidence            1   01111  377899999999999864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.89  E-value=1.6e-23  Score=167.87  Aligned_cols=196  Identities=11%  Similarity=-0.012  Sum_probs=144.8

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++||||+|+||++++++|+++|++|++++|+.+..+.       ...++.++.+|++|.+++.++++       ++|+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   70 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-------ENEHLKVKKADVSSLDEVCEVCK-------GADA   70 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-------CCTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-------ccCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence            689999999999999999999999999999999765322       12568999999999999888875       5999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------  163 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  163 (259)
                      |||++|....          ....+++|+.++.++++++..    .+.        .+||++||...+.+.         
T Consensus        71 vi~~a~~~~~----------~~~~~~~n~~~~~~l~~~~~~----~~~--------~~~v~~Ss~~~~~~~~~~~~~~~~  128 (227)
T 3dhn_A           71 VISAFNPGWN----------NPDIYDETIKVYLTIIDGVKK----AGV--------NRFLMVGGAGSLFIAPGLRLMDSG  128 (227)
T ss_dssp             EEECCCC----------------CCSHHHHHHHHHHHHHHH----TTC--------SEEEEECCSTTSEEETTEEGGGTT
T ss_pred             EEEeCcCCCC----------ChhHHHHHHHHHHHHHHHHHH----hCC--------CEEEEeCChhhccCCCCCccccCC
Confidence            9999985311          123678899998888887754    322        689999998765443         


Q ss_pred             -ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc-----CCCCCCHHHHH
Q 024976          164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-----AYKFGEKWDIA  237 (259)
Q Consensus       164 -~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva  237 (259)
                       .+...|+.+|.+.+.+.+.++.    ..|++++.++||.+.++.........      ....+     ...+.+++|+|
T Consensus       129 ~~p~~~Y~~sK~~~e~~~~~~~~----~~~~~~~ilrp~~v~g~~~~~~~~~~------~~~~~~~~~~~~~~i~~~Dva  198 (227)
T 3dhn_A          129 EVPENILPGVKALGEFYLNFLMK----EKEIDWVFFSPAADMRPGVRTGRYRL------GKDDMIVDIVGNSHISVEDYA  198 (227)
T ss_dssp             CSCGGGHHHHHHHHHHHHHTGGG----CCSSEEEEEECCSEEESCCCCCCCEE------ESSBCCCCTTSCCEEEHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhh----ccCccEEEEeCCcccCCCccccceee------cCCCcccCCCCCcEEeHHHHH
Confidence             2367899999999998887765    34799999999999866543222110      01111     12356899999


Q ss_pred             HHHHHhcCccCCccccccc
Q 024976          238 MAALYLASDAAVHRDLIHL  256 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i  256 (259)
                      ++++.++....  ..|+.+
T Consensus       199 ~ai~~~l~~~~--~~g~~~  215 (227)
T 3dhn_A          199 AAMIDELEHPK--HHQERF  215 (227)
T ss_dssp             HHHHHHHHSCC--CCSEEE
T ss_pred             HHHHHHHhCcc--ccCcEE
Confidence            99999997644  244443

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.89  E-value=1.4e-22  Score=169.98  Aligned_cols=199  Identities=14%  Similarity=0.076  Sum_probs=144.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |+++||||+|+||++++++|+++|..|++..++....+       .....+.++.+|+++ +++.++++       ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~-------~~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~   66 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE-------FVNEAARLVKADLAA-DDIKDYLK-------GAEE   66 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG-------GSCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh-------hcCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence            47999999999999999999999944444444433211       113468899999999 88777764       7999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------  161 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------  161 (259)
                      |||+|+...    ...+.++++..+++|+.++.++++++..    .+.        ++||++||...+.           
T Consensus        67 vih~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~--------~~iv~~SS~~vyg~~~~~~~~E~~  130 (313)
T 3ehe_A           67 VWHIAANPD----VRIGAENPDEIYRNNVLATYRLLEAMRK----AGV--------SRIVFTSTSTVYGEAKVIPTPEDY  130 (313)
T ss_dssp             EEECCCCCC----CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HTC--------CEEEEECCGGGGCSCSSSSBCTTS
T ss_pred             EEECCCCCC----hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cCC--------CeEEEeCchHHhCcCCCCCCCCCC
Confidence            999999532    2334566788999999999999988653    232        6899999987652           


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhc---------cCCCCCC
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM---------AAYKFGE  232 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  232 (259)
                      +..+...|+.+|.+.+.+++.++.++    |++++.++|+.+.++.......+...........         ....+..
T Consensus       131 ~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  206 (313)
T 3ehe_A          131 PTHPISLYGASKLACEALIESYCHTF----DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIY  206 (313)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEE
Confidence            33456789999999999999999876    4999999999998765433222222222111111         1124677


Q ss_pred             HHHHHHHHHHhcCc
Q 024976          233 KWDIAMAALYLASD  246 (259)
Q Consensus       233 ~~dva~~~~~l~s~  246 (259)
                      .+|+|+++++++.+
T Consensus       207 v~Dva~a~~~~~~~  220 (313)
T 3ehe_A          207 ISDCVDAMLFGLRG  220 (313)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhcc
Confidence            99999999999973

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.89  E-value=7e-23  Score=173.52  Aligned_cols=204  Identities=18%  Similarity=0.139  Sum_probs=147.8

Q ss_pred             EEEEeCCccchHHHHHHHHHHc---C---CeEEEEeCChhh--HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKH---G---AAIAIMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~---G---~~vv~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +++||||+|+||++++++|+++   |   ++|++++|+...  .+.+ +.+. .+.++.++.+|++|.+++++++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence            6999999999999999999997   8   899999986421  1111 1111 1356899999999999887776     


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----  161 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  161 (259)
                        +++|+|||+||....    +.+.++++..+++|+.++.++++++.+.    +.        ++||++||...+.    
T Consensus        75 --~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~--------~~~v~~SS~~vyg~~~~  136 (337)
T 1r6d_A           75 --RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----GV--------GRVVHVSTNQVYGSIDS  136 (337)
T ss_dssp             --TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TC--------CEEEEEEEGGGGCCCSS
T ss_pred             --cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEecchHHhCCCCC
Confidence              479999999996421    1223456788999999999999998764    22        6799999976542    


Q ss_pred             -------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhh--cc------
Q 024976          162 -------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MA------  226 (259)
Q Consensus       162 -------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~------  226 (259)
                             +..+...|+.+|.+.+.+++.++.+++    ++++.++|+.+.++..................  .+      
T Consensus       137 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g----~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (337)
T 1r6d_A          137 GSWTESSPLEPNSPYAASKAGSDLVARAYHRTYG----LDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA  212 (337)
T ss_dssp             SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC
T ss_pred             CCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHC----CCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCC
Confidence                   234467899999999999999988764    99999999999877543211111222222111  11      


Q ss_pred             -CCCCCCHHHHHHHHHHhcCc
Q 024976          227 -AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 -~~~~~~~~dva~~~~~l~s~  246 (259)
                       ...+..++|+|+++++++..
T Consensus       213 ~~~~~i~v~Dva~a~~~~~~~  233 (337)
T 1r6d_A          213 NVREWVHTDDHCRGIALVLAG  233 (337)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHH
T ss_pred             eeEeeEeHHHHHHHHHHHHhC
Confidence             12356799999999999864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=4e-22  Score=171.39  Aligned_cols=212  Identities=15%  Similarity=0.071  Sum_probs=149.6

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-----HHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-----~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      |+++||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.+.. .+.++.++.+|++|.+++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999987542     2221111110 2346889999999999999988765   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----  162 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  162 (259)
                        ++|+|||+||.....    .+.++++..+++|+.++.++++++.+...+.         .++||++||...+..    
T Consensus       102 --~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~---------~~~iv~~SS~~~~~~~~~~  166 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN---------SVKFYQASTSELYGKVQEI  166 (375)
T ss_dssp             --CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGTCSCSSS
T ss_pred             --CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCc---------cceEEEecchhhhCCCCCC
Confidence              699999999963211    1345678899999999999999997654311         268999999876542    


Q ss_pred             -------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH---HHHHHh-hhhc---cC-
Q 024976          163 -------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKA-TDYM---AA-  227 (259)
Q Consensus       163 -------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~-~~~~---~~-  227 (259)
                             ..+...|+.+|++++.+++.++.+++    +.+..+.|+.+..+.........   ...... ....   .. 
T Consensus       167 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  242 (375)
T 1t2a_A          167 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN----LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG  242 (375)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEES
T ss_pred             CCCccCCCCCCChhHHHHHHHHHHHHHHHHHhC----CCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeC
Confidence                   22456899999999999999998764    78888888777655332222111   111111 1111   11 


Q ss_pred             -----CCCCCHHHHHHHHHHhcCc
Q 024976          228 -----YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       228 -----~~~~~~~dva~~~~~l~s~  246 (259)
                           ..+...+|++++++.++..
T Consensus       243 ~~~~~~~~i~v~Dva~a~~~~~~~  266 (375)
T 1t2a_A          243 NLDAKRDWGHAKDYVEAMWLMLQN  266 (375)
T ss_dssp             CTTCEECCEEHHHHHHHHHHHHHS
T ss_pred             CCCceeeeEEHHHHHHHHHHHHhc
Confidence                 1356799999999998754

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.89  E-value=4.4e-22  Score=168.43  Aligned_cols=213  Identities=15%  Similarity=0.041  Sum_probs=149.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHH-HHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR-SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .-.++++|||||+|+||++++++|+++|++|++++|+.+... ...+.+. ...++.++.+|++|.+++.++++..    
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA----   85 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc----
Confidence            346789999999999999999999999999999999765321 1111111 1345889999999999999988765    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----  163 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  163 (259)
                       ++|+|||+||.....    .+.++++..+++|+.++.++++++.+.   ..        .++||++||...+.+.    
T Consensus        86 -~~d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~--------~~~~v~~SS~~v~g~~~~~~  149 (335)
T 1rpn_A           86 -QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF---SP--------ETRFYQASTSEMFGLIQAER  149 (335)
T ss_dssp             -CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH---CT--------TSEEEEEEEGGGGCSCSSSS
T ss_pred             -CCCEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHh---CC--------CCeEEEEeCHHHhCCCCCCC
Confidence             699999999953211    112456788999999999999998654   10        1679999997665332    


Q ss_pred             -------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHH---HHHh-hhhcc---CC-
Q 024976          164 -------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI---RSKA-TDYMA---AY-  228 (259)
Q Consensus       164 -------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~---~~~~-~~~~~---~~-  228 (259)
                             .+...|+.+|.+.+.+++.++.+++    +++..+.|+.+..+...........   .... ....+   .+ 
T Consensus       150 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~----~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  225 (335)
T 1rpn_A          150 QDENTPFYPRSPYGVAKLYGHWITVNYRESFG----LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGN  225 (335)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESC
T ss_pred             CCcccCCCCCChhHHHHHHHHHHHHHHHHHcC----CcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCC
Confidence                   2245799999999999999988764    8888899988876543322211111   1111 11111   11 


Q ss_pred             -----CCCCHHHHHHHHHHhcCc
Q 024976          229 -----KFGEKWDIAMAALYLASD  246 (259)
Q Consensus       229 -----~~~~~~dva~~~~~l~s~  246 (259)
                           .+...+|+|++++.++..
T Consensus       226 g~~~~~~i~v~Dva~a~~~~~~~  248 (335)
T 1rpn_A          226 VDAKRDWGFAGDYVEAMWLMLQQ  248 (335)
T ss_dssp             TTCEEECEEHHHHHHHHHHHHHS
T ss_pred             CcceeceEEHHHHHHHHHHHHhc
Confidence                 256789999999998864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.89  E-value=5.6e-22  Score=168.63  Aligned_cols=171  Identities=15%  Similarity=0.078  Sum_probs=132.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh------HHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------LRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~------~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +|+++||||+|+||++++++|+++|++|++++|+...      ..+..+.+.. .+.++.++.+|++|.+++++++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            5799999999999999999999999999999875432      1222233322 2456889999999999998888652 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--  162 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  162 (259)
                          ++|+|||+||.....    .+.++++..+++|+.++.++++++..    .+.        ++||++||...+..  
T Consensus        81 ----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--------~~iv~~SS~~~~g~~~  140 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKA----HGV--------KNLVFSSSATVYGNPQ  140 (348)
T ss_dssp             ----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTC--------CEEEEEEEGGGGCSCS
T ss_pred             ----CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHHHH----hCC--------CEEEEECcHHHhCCCC
Confidence                799999999964321    13456788999999999999887643    332        78999999776531  


Q ss_pred             ---------C-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCC
Q 024976          163 ---------T-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  206 (259)
Q Consensus       163 ---------~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~  206 (259)
                               . +....|+.+|.+.+.+++.++.+ +  .++++..++|+.+..+
T Consensus       141 ~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~--~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          141 YLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D--KTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             SSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C--TTCEEEEEEECEEECC
T ss_pred             CCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc-C--CCcceEEEeeccccCC
Confidence                     1 22668999999999999999887 3  3699999999988765

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.89  E-value=1.3e-21  Score=169.34  Aligned_cols=172  Identities=17%  Similarity=0.078  Sum_probs=134.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHH-HcCCeEEEEeCChhh---------HHHHHHHHHhcC-----CC---eEEEEcCCCCH
Q 024976           12 GKVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRRKTV---------LRSAVAALHSLG-----IP---AIGLEGDVRKR   73 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~-~~G~~vv~~~r~~~~---------~~~~~~~~~~~~-----~~---v~~~~~Dl~~~   73 (259)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+....     .+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999987543         334433333321     24   88999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEE
Q 024976           74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN  153 (259)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  153 (259)
                      +++.+++++    ++++|+|||+||.....    .+.++++..+++|+.+++++++++..    .+.        ++||+
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~--------~~iv~  141 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL----HKC--------DKIIF  141 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTC--------CEEEE
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHHH----hCC--------CEEEE
Confidence            998888763    45699999999964321    13456788999999999999998643    222        68999


Q ss_pred             eccccccccCc------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc
Q 024976          154 ISATLHYTATW------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       154 isS~~~~~~~~------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~  207 (259)
                      +||...+....                  +...|+.+|++.+.+++.++.++    |++++.++|+.+..+.
T Consensus       142 ~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          142 SSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFNACGAH  209 (397)
T ss_dssp             EEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECCC
T ss_pred             ECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH----CCcEEEEeccceeCCC
Confidence            99976543221                  25689999999999999999887    4999999999998664

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.88  E-value=2.7e-23  Score=176.18  Aligned_cols=205  Identities=14%  Similarity=0.069  Sum_probs=140.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH--HHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA--VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~--~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..+..  ...+. ...++.++.+|++|.+++.++++       +
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~   80 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------G   80 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------C
Confidence            68999999999999999999999999999888875532211  12232 23468899999999988777764       5


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHH-HHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNG-FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----  163 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  163 (259)
                      +|+|||+|+...   +   ..++ .++.+++|+.+++++++++.+..   +.        ++||++||..+..+.     
T Consensus        81 ~D~Vih~A~~~~---~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v--------~r~V~~SS~~~~~~~~~~~~  143 (338)
T 2rh8_A           81 CDFVFHVATPVH---F---ASEDPENDMIKPAIQGVVNVMKACTRAK---SV--------KRVILTSSAAAVTINQLDGT  143 (338)
T ss_dssp             CSEEEEESSCCC---C------------CHHHHHHHHHHHHHHHHCT---TC--------CEEEEECCHHHHHHHHHTCS
T ss_pred             CCEEEEeCCccC---C---CCCCcHHHHHHHHHHHHHHHHHHHHHcC---Cc--------CEEEEEecHHHeecCCcCCC
Confidence            899999998531   1   1122 24588999999999999987532   12        689999997632110     


Q ss_pred             ----------------c---cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHH----
Q 024976          164 ----------------W---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK----  220 (259)
Q Consensus       164 ----------------~---~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~----  220 (259)
                                      +   ....|+.||.+.+.+++.++.++    |++++.++|+.+.++........ .....    
T Consensus       144 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~~lrp~~v~Gp~~~~~~~~-~~~~~~~~~  218 (338)
T 2rh8_A          144 GLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN----NIDLITVIPTLMAGSSLTSDVPS-SIGLAMSLI  218 (338)
T ss_dssp             CCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH----TCCEEEEEECEEESCCSSSSCCH-HHHHHHHHH
T ss_pred             CcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCCc-hHHHHHHHH
Confidence                            0   01159999999998888776554    59999999999998754333221 11000    


Q ss_pred             ------hh--hhc--cCC--CCCCHHHHHHHHHHhcCc
Q 024976          221 ------AT--DYM--AAY--KFGEKWDIAMAALYLASD  246 (259)
Q Consensus       221 ------~~--~~~--~~~--~~~~~~dva~~~~~l~s~  246 (259)
                            +.  ...  +.+  .+..++|+|++++++++.
T Consensus       219 ~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  256 (338)
T 2rh8_A          219 TGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEK  256 (338)
T ss_dssp             HTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHC
T ss_pred             cCCccccccccccccccCcccEEEHHHHHHHHHHHHcC
Confidence                  00  000  001  377899999999999854

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.88  E-value=1.4e-21  Score=156.16  Aligned_cols=189  Identities=11%  Similarity=0.022  Sum_probs=130.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||+|+||++++++|+++|++|++++|+.+.++..      ...++.++.+|++|.++         +.++++|+|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~---------~~~~~~d~v   66 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------LGATVATLVKEPLVLTE---------ADLDSVDAV   66 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------TCTTSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc------cCCCceEEecccccccH---------hhcccCCEE
Confidence            599999999999999999999999999999997765432      13468999999999887         223579999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc--------
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--------  165 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  165 (259)
                      |||+|.....           ...++|+.++..++    +.+++.         ++++|++||..++.+.+.        
T Consensus        67 i~~ag~~~~~-----------~~~~~n~~~~~~l~----~a~~~~---------~~~~v~~SS~~~~~~~~~~~~~~~~~  122 (224)
T 3h2s_A           67 VDALSVPWGS-----------GRGYLHLDFATHLV----SLLRNS---------DTLAVFILGSASLAMPGADHPMILDF  122 (224)
T ss_dssp             EECCCCCTTS-----------SCTHHHHHHHHHHH----HTCTTC---------CCEEEEECCGGGSBCTTCSSCGGGGC
T ss_pred             EECCccCCCc-----------chhhHHHHHHHHHH----HHHHHc---------CCcEEEEecceeeccCCCCccccccC
Confidence            9999975111           01245666655544    444443         278999999876554332        


Q ss_pred             ------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          166 ------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       166 ------~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                            ...|+.+|++.+.+ +   .... ..|++++.++||.+.++.....+..  ....+........+.+++|+|++
T Consensus       123 ~~~~~~~~~y~~sK~~~e~~-~---~~~~-~~~i~~~ivrp~~v~g~~~~~~~~~--~~~~~~~~~~~~~~i~~~DvA~~  195 (224)
T 3h2s_A          123 PESAASQPWYDGALYQYYEY-Q---FLQM-NANVNWIGISPSEAFPSGPATSYVA--GKDTLLVGEDGQSHITTGNMALA  195 (224)
T ss_dssp             CGGGGGSTTHHHHHHHHHHH-H---HHTT-CTTSCEEEEEECSBCCCCCCCCEEE--ESSBCCCCTTSCCBCCHHHHHHH
T ss_pred             CCCCccchhhHHHHHHHHHH-H---HHHh-cCCCcEEEEcCccccCCCcccCcee--cccccccCCCCCceEeHHHHHHH
Confidence                  56799999988854 2   2223 6689999999999987632221100  00000000112347899999999


Q ss_pred             HHHhcCccC
Q 024976          240 ALYLASDAA  248 (259)
Q Consensus       240 ~~~l~s~~~  248 (259)
                      ++.++....
T Consensus       196 ~~~~l~~~~  204 (224)
T 3h2s_A          196 ILDQLEHPT  204 (224)
T ss_dssp             HHHHHHSCC
T ss_pred             HHHHhcCcc
Confidence            999997643

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.87  E-value=3.5e-22  Score=167.69  Aligned_cols=192  Identities=13%  Similarity=0.075  Sum_probs=113.0

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.            .+  ++.+|++|.+++.++++..     ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~--~~~~Dl~d~~~~~~~~~~~-----~~d   62 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------PK--FEQVNLLDSNAVHHIIHDF-----QPH   62 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH-----CCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------CC--eEEecCCCHHHHHHHHHhh-----CCC
Confidence            5799999999999999999999999999999986543            01  6789999999999888754     699


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------  162 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  162 (259)
                      +|||+||.....    .+.++++..+++|+.++.++++++.+.             +++||++||...+.+         
T Consensus        63 ~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~-------------~~~~v~~SS~~v~~~~~~~~~E~~  125 (315)
T 2ydy_A           63 VIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAAV-------------GAFLIYISSDYVFDGTNPPYREED  125 (315)
T ss_dssp             EEEECC-----------------------CHHHHHHHHHHHHH-------------TCEEEEEEEGGGSCSSSCSBCTTS
T ss_pred             EEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEEchHHHcCCCCCCCCCCC
Confidence            999999964321    245678899999999999999999763             157999999877644         


Q ss_pred             -CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhh--h------hccCCCCCCH
Q 024976          163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--D------YMAAYKFGEK  233 (259)
Q Consensus       163 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~  233 (259)
                       ..+...|+.+|.+.+.+++.++.++   ..+|++.|. |+..++.  ..+.+. ......  .      ..+...+..+
T Consensus       126 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~lR~~~v~-G~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v  198 (315)
T 2ydy_A          126 IPAPLNLYGKTKLDGEKAVLENNLGA---AVLRIPILY-GEVEKLE--ESAVTV-MFDKVQFSNKSANMDHWQQRFPTHV  198 (315)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHCTTC---EEEEECSEE-CSCSSGG--GSTTGG-GHHHHHCCSSCEEEECSSBBCCEEH
T ss_pred             CCCCcCHHHHHHHHHHHHHHHhCCCe---EEEeeeeee-CCCCccc--ccHHHH-HHHHHHhcCCCeeeccCceECcEEH
Confidence             3446689999999999999874332   134444444 4333210  011111 111111  0      1123467889


Q ss_pred             HHHHHHHHHhcCc
Q 024976          234 WDIAMAALYLASD  246 (259)
Q Consensus       234 ~dva~~~~~l~s~  246 (259)
                      +|+|+++++++..
T Consensus       199 ~Dva~a~~~~~~~  211 (315)
T 2ydy_A          199 KDVATVCRQLAEK  211 (315)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999864

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.87  E-value=2.1e-22  Score=171.97  Aligned_cols=208  Identities=14%  Similarity=0.137  Sum_probs=145.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..+++++++||||+|+||++++++|+++| ++|++++|+.....  .+.+.    ++. +.+|+++.+.++++++.  ..
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~~  112 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--EE  112 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--CC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--cc
Confidence            34678999999999999999999999999 89999998765321  01111    223 67899999888887753  12


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc--
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--  164 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  164 (259)
                      ++++|+|||+||....      +.++++..+++|+.++.++++++.+.    +         .+||++||...+....  
T Consensus       113 ~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~---------~r~V~~SS~~v~g~~~~~  173 (357)
T 2x6t_A          113 FGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E---------IPFLYASSAATYGGRTSD  173 (357)
T ss_dssp             CSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T---------CCEEEEEEGGGGCSCSSC
T ss_pred             cCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHc----C---------CeEEEEcchHHhCCCCCC
Confidence            4689999999996432      23356788999999999999999763    1         2599999987654332  


Q ss_pred             ---------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC----CChHHHHHHhhhh-------
Q 024976          165 ---------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDY-------  224 (259)
Q Consensus       165 ---------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~~~~~-------  224 (259)
                               +...|+.+|.+.+.+++.++.++    |++++.++|+.+.++.....    ..-..........       
T Consensus       174 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (357)
T 2x6t_A          174 FIESREYEKPLNVFGYSKFLFDEYVRQILPEA----NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFE  249 (357)
T ss_dssp             CCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC----SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEET
T ss_pred             CcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeC
Confidence                     25589999999999999887653    69999999999987653211    0011121211111       


Q ss_pred             --cc-CCCCCCHHHHHHHHHHhcCcc
Q 024976          225 --MA-AYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       225 --~~-~~~~~~~~dva~~~~~l~s~~  247 (259)
                        .+ ...+..++|+|+++++++...
T Consensus       250 ~~~~~~~~~i~v~Dva~ai~~~~~~~  275 (357)
T 2x6t_A          250 GSENFKRDFVYVGDVADVNLWFLENG  275 (357)
T ss_dssp             TGGGCEECEEEHHHHHHHHHHHHHHC
T ss_pred             CCCcceEccEEHHHHHHHHHHHHhcC
Confidence              11 234678999999999998653

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.87  E-value=3.8e-21  Score=153.05  Aligned_cols=189  Identities=11%  Similarity=0.002  Sum_probs=124.1

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||+|+||++++++|+++|++|++++|+.++++...       .++.++.+|++|.++         +.++++|+|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~---------~~~~~~d~v   65 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL---------SDLSDQNVV   65 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh---------hhhcCCCEE
Confidence            6999999999999999999999999999999977654322       468899999999887         223579999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc---------
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW---------  164 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  164 (259)
                      |||+|....             ..+.|+.+    ++.+++.+++.+.        +++|++||..++.+.+         
T Consensus        66 i~~ag~~~~-------------~~~~~~~~----~~~l~~a~~~~~~--------~~~v~~SS~~~~~~~~~~~~~~~~~  120 (221)
T 3ew7_A           66 VDAYGISPD-------------EAEKHVTS----LDHLISVLNGTVS--------PRLLVVGGAASLQIDEDGNTLLESK  120 (221)
T ss_dssp             EECCCSSTT-------------TTTSHHHH----HHHHHHHHCSCCS--------SEEEEECCCC---------------
T ss_pred             EECCcCCcc-------------ccchHHHH----HHHHHHHHHhcCC--------ceEEEEecceEEEcCCCCccccccC
Confidence            999996321             12334444    4555556655543        8899999987754432         


Q ss_pred             ---cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          165 ---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       165 ---~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                         +...|+.+|.+.+.+. .+..  . ..|++++.|+||.+.++......... ....+.-......+.+++|+|++++
T Consensus       121 ~~~~~~~y~~~k~~~e~~~-~~~~--~-~~gi~~~ivrp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~  195 (221)
T 3ew7_A          121 GLREAPYYPTARAQAKQLE-HLKS--H-QAEFSWTYISPSAMFEPGERTGDYQI-GKDHLLFGSDGNSFISMEDYAIAVL  195 (221)
T ss_dssp             ----CCCSCCHHHHHHHHH-HHHT--T-TTTSCEEEEECSSCCCCC----------------------CCCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHH-HHHh--h-ccCccEEEEeCcceecCCCccCceEe-ccccceecCCCCceEeHHHHHHHHH
Confidence               2345999999998873 2322  1 56799999999999876221110000 0000000011124788999999999


Q ss_pred             HhcCccC
Q 024976          242 YLASDAA  248 (259)
Q Consensus       242 ~l~s~~~  248 (259)
                      .++....
T Consensus       196 ~~l~~~~  202 (221)
T 3ew7_A          196 DEIERPN  202 (221)
T ss_dssp             HHHHSCS
T ss_pred             HHHhCcc
Confidence            9996643

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.87  E-value=5.6e-21  Score=161.29  Aligned_cols=164  Identities=15%  Similarity=0.101  Sum_probs=130.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++||||+|+||++++++|+++|++|++++|+.....   +   ....++.++.+|++|.+++++++++     .++|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~---~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   70 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---D---AITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA   70 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---G---GSCTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---h---hcCCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence            58999999999999999999999999999998754321   1   1122688999999999999888765     37999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------  162 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  162 (259)
                      |||+||.....    .+.++++..+++|+.++.++++++..    .+.        ++||++||...+..          
T Consensus        71 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~--------~~~v~~Ss~~~~~~~~~~~~~E~~  134 (330)
T 2c20_A           71 VMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMDE----FKV--------DKFIFSSTAATYGEVDVDLITEET  134 (330)
T ss_dssp             EEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TTC--------CEEEEECCGGGGCSCSSSSBCTTS
T ss_pred             EEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHHH----cCC--------CEEEEeCCceeeCCCCCCCCCcCC
Confidence            99999964321    13456788999999999999988753    222        68999999766532          


Q ss_pred             -CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc
Q 024976          163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       163 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~  207 (259)
                       ..+...|+.+|.+.+.+++.++.++    |++++.++|+.+.++.
T Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          135 MTNPTNTYGETKLAIEKMLHWYSQAS----NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHTS----SCEEEEEECSEEECCC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEecCcccCCC
Confidence             1235689999999999999988754    5999999999998664

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.87  E-value=1.9e-21  Score=166.95  Aligned_cols=208  Identities=16%  Similarity=0.073  Sum_probs=149.7

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCC-CHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~~   84 (259)
                      +..+++++++||||+|+||++++++|+++ |++|++++|+.+......+     ..++.++.+|++ |.+.+.++++   
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~---   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK---   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH---
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc---
Confidence            34467899999999999999999999999 9999999998765433211     246999999999 9999988876   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-  163 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  163 (259)
                          ++|+|||+|+.....    ...++....+++|+.++.++++++...-             .++|++||...+... 
T Consensus        91 ----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-------------~~~v~~SS~~vyg~~~  149 (372)
T 3slg_A           91 ----KCDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSAVKYG-------------KHLVFPSTSEVYGMCA  149 (372)
T ss_dssp             ----HCSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHHHHHT-------------CEEEEECCGGGGBSCC
T ss_pred             ----cCCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHHHHhC-------------CcEEEeCcHHHhCCCC
Confidence                589999999964321    1234566788999999999999886541             459999997544321 


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC--------ChHHHH
Q 024976          164 -----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------APEEIR  218 (259)
Q Consensus       164 -----------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~--------~~~~~~  218 (259)
                                       .+...|+.+|.+.+.+++.++.+     |++++.++|+.+..+......        .-....
T Consensus       150 ~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~-----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~  224 (372)
T 3slg_A          150 DEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME-----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFL  224 (372)
T ss_dssp             CSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT-----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHH
T ss_pred             CCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC-----CCCEEEEccccccCCCcccccccccccchHHHHHH
Confidence                             23347999999999999887653     699999999999876533211        011222


Q ss_pred             HHhhhhcc---------CCCCCCHHHHHHHHHHhcCccC
Q 024976          219 SKATDYMA---------AYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       219 ~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      .......+         ...+...+|+|+++++++....
T Consensus       225 ~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~  263 (372)
T 3slg_A          225 GHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSN  263 (372)
T ss_dssp             HHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred             HHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhccc
Confidence            22221111         1136679999999999987654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.86  E-value=6.5e-21  Score=161.46  Aligned_cols=169  Identities=18%  Similarity=0.124  Sum_probs=126.1

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +++||||+|+||++++++|+++|++|++++|.........+.+.. .+.++.++.+|++|+++++++++..     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            699999999999999999999999999988643211111222221 1346888999999999998887642     6999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------  162 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  162 (259)
                      ||||||.....    ...+++...+++|+.+++++++++..    .+.        ++||++||...+..          
T Consensus        77 vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--------~~iv~~SS~~~~g~~~~~~~~e~~  140 (338)
T 1udb_A           77 VIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRA----ANV--------KNFIFSSSATVYGDNPKIPYVESF  140 (338)
T ss_dssp             EEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----HTC--------CEEEEEEEGGGGCSCCSSSBCTTS
T ss_pred             EEECCccCccc----cchhcHHHHHHHHHHHHHHHHHHHHh----cCC--------CeEEEEccHHHhCCCCCCCcCccc
Confidence            99999964221    12344567899999999999887543    332        68999999765421          


Q ss_pred             -C-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCC
Q 024976          163 -T-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  206 (259)
Q Consensus       163 -~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~  206 (259)
                       . +....|+.||++++.+++.++.++   .|+++..++|+.+..+
T Consensus       141 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          141 PTGTPQSPYGKSKLMVEQILTDLQKAQ---PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHS---TTCEEEEEEECEEECC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhc---CCCceEEEeeceecCC
Confidence             1 225689999999999999998875   2689999998776543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.86  E-value=2e-21  Score=164.84  Aligned_cols=210  Identities=15%  Similarity=0.010  Sum_probs=147.9

Q ss_pred             cEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHHHcCCc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFGKL   90 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~~~g~i   90 (259)
                      ++++||||+|+||++++++|+++ |++|++++|+.+..+...     ...++.++.+|++| .+.++++++       ++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------~~   68 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------KC   68 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence            47999999999999999999998 899999999876543211     13468899999998 456666654       48


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW------  164 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  164 (259)
                      |+|||+||.....    ...++++..+++|+.++.++++++...             +++||++||...+....      
T Consensus        69 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~v~~SS~~v~g~~~~~~~~e  131 (345)
T 2bll_A           69 DVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-------------RKRIIFPSTSEVYGMCSDKYFDE  131 (345)
T ss_dssp             SEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-------------TCEEEEECCGGGGBTCCCSSBCT
T ss_pred             CEEEEcccccCcc----chhcCHHHHHHHHHHHHHHHHHHHHHh-------------CCeEEEEecHHHcCCCCCCCcCC
Confidence            9999999964321    112456788999999999998888542             15699999976542211      


Q ss_pred             ------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC------C--hHHHHHHhhhh
Q 024976          165 ------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------A--PEEIRSKATDY  224 (259)
Q Consensus       165 ------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~------~--~~~~~~~~~~~  224 (259)
                                  +...|+.+|.+.+.+++.++.++    |++++.++||.+.++......      .  -..........
T Consensus       132 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (345)
T 2bll_A          132 DHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEG  207 (345)
T ss_dssp             TTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHT
T ss_pred             cccccccCcccCcccccHHHHHHHHHHHHHHHHhc----CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcC
Confidence                        12379999999999999998775    499999999999876542210      0  01122111111


Q ss_pred             cc---------CCCCCCHHHHHHHHHHhcCccCCcccccc
Q 024976          225 MA---------AYKFGEKWDIAMAALYLASDAAVHRDLIH  255 (259)
Q Consensus       225 ~~---------~~~~~~~~dva~~~~~l~s~~~~~~tG~~  255 (259)
                      .+         ...+...+|+|+++++++.......+|+.
T Consensus       208 ~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~  247 (345)
T 2bll_A          208 SPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEI  247 (345)
T ss_dssp             CCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEE
T ss_pred             CCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCce
Confidence            11         11367899999999999875433334443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.86  E-value=1.4e-20  Score=157.73  Aligned_cols=196  Identities=14%  Similarity=0.078  Sum_probs=143.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .++++||||+|+||++++++|+++|++|++++|+....+     +.    ++.++.+|++ .+++.++++       ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~Dl~-~~~~~~~~~-------~~d   64 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN----DYEYRVSDYT-LEDLINQLN-------DVD   64 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------TCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC----ceEEEEcccc-HHHHHHhhc-------CCC
Confidence            378999999999999999999999999999999843322     11    5889999999 888877765       799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------  163 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  163 (259)
                      +|||+|+.....        ++...+++|+.++.++++++..    .+.        .+||++||...+...        
T Consensus        65 ~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~----~~~--------~r~v~~SS~~vyg~~~~~~~~E~  124 (311)
T 3m2p_A           65 AVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYE----NNI--------SNIVYASTISAYSDETSLPWNEK  124 (311)
T ss_dssp             EEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHH----TTC--------CEEEEEEEGGGCCCGGGCSBCTT
T ss_pred             EEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHH----cCC--------CEEEEEccHHHhCCCCCCCCCCC
Confidence            999999965432        3466788999999999888853    222        679999997654322        


Q ss_pred             ---ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc---------CCCCC
Q 024976          164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA---------AYKFG  231 (259)
Q Consensus       164 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~  231 (259)
                         .+...|+.+|.+.+.+++.++.+.    |++++.++|+.+.++...................+         ...+.
T Consensus       125 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v  200 (311)
T 3m2p_A          125 ELPLPDLMYGVSKLACEHIGNIYSRKK----GLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFL  200 (311)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHHS----CCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEE
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHc----CCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceE
Confidence               234689999999999999888754    59999999999987654322112222222221111         11256


Q ss_pred             CHHHHHHHHHHhcCccC
Q 024976          232 EKWDIAMAALYLASDAA  248 (259)
Q Consensus       232 ~~~dva~~~~~l~s~~~  248 (259)
                      ..+|+|++++.++....
T Consensus       201 ~v~Dva~a~~~~~~~~~  217 (311)
T 3m2p_A          201 YAKDAAKSVIYALKQEK  217 (311)
T ss_dssp             EHHHHHHHHHHHTTCTT
T ss_pred             EHHHHHHHHHHHHhcCC
Confidence            68899999999997653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.86  E-value=4.5e-21  Score=159.23  Aligned_cols=185  Identities=15%  Similarity=0.172  Sum_probs=136.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .-..++++||||+|+||++++++|+++|++|++++|+                     .+|++|.+++.+++++.     
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~-----   62 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK-----   62 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc-----
Confidence            3457899999999999999999999999999999986                     37999999999888754     


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc----
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----  164 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  164 (259)
                      ++|+|||+||....    +.+.++++..+++|+.++.++++++.+.    +         .+||++||...+.+..    
T Consensus        63 ~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~---------~~iv~~SS~~v~~~~~~~~~  125 (292)
T 1vl0_A           63 KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV----G---------AEIVQISTDYVFDGEAKEPI  125 (292)
T ss_dssp             CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T---------CEEEEEEEGGGSCSCCSSCB
T ss_pred             CCCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C---------CeEEEechHHeECCCCCCCC
Confidence            69999999996321    1234667899999999999999998763    1         4799999986654322    


Q ss_pred             -------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhc-------cCCCC
Q 024976          165 -------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM-------AAYKF  230 (259)
Q Consensus       165 -------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~  230 (259)
                             +...|+.+|.+.+.+++.++.        ++..++|+.+.++ . ..+. ...........       ....+
T Consensus       126 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~--------~~~~lR~~~v~G~-~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~  194 (292)
T 1vl0_A          126 TEFDEVNPQSAYGKTKLEGENFVKALNP--------KYYIVRTAWLYGD-G-NNFV-KTMINLGKTHDELKVVHDQVGTP  194 (292)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHCS--------SEEEEEECSEESS-S-SCHH-HHHHHHHHHCSEEEEESSCEECC
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHhhCC--------CeEEEeeeeeeCC-C-cChH-HHHHHHHhcCCcEEeecCeeeCC
Confidence                   356899999999999887532        3677888888755 1 1111 12222111111       12456


Q ss_pred             CCHHHHHHHHHHhcCcc
Q 024976          231 GEKWDIAMAALYLASDA  247 (259)
Q Consensus       231 ~~~~dva~~~~~l~s~~  247 (259)
                      ..++|+|++++++++..
T Consensus       195 i~v~Dva~~~~~~~~~~  211 (292)
T 1vl0_A          195 TSTVDLARVVLKVIDEK  211 (292)
T ss_dssp             EEHHHHHHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHhcC
Confidence            78999999999998753

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.85  E-value=1.1e-20  Score=158.30  Aligned_cols=202  Identities=13%  Similarity=-0.023  Sum_probs=147.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHc--CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +++++||||+|+||++++++|+++  |++|++++|+....+     +.   .++.++.+|++|.+++.+++++.     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~---~~~~~~~~D~~d~~~~~~~~~~~-----~   68 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV---NSGPFEVVNALDFNQIEHLVEVH-----K   68 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH---HSSCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc---CCCceEEecCCCHHHHHHHHhhc-----C
Confidence            478999999999999999999999  899999998765421     11   14678999999999999888653     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------  163 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  163 (259)
                      +|+|||+||.....     ..++++..+++|+.++.++++++.+    .+.        +++|++||...+.+.      
T Consensus        69 ~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--------~~~v~~SS~~~~~~~~~~~~~  131 (312)
T 2yy7_A           69 ITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKA----KKI--------KKIFWPSSIAVFGPTTPKENT  131 (312)
T ss_dssp             CCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHT----TSC--------SEEECCEEGGGCCTTSCSSSB
T ss_pred             CCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHH----cCC--------CEEEEeccHHHhCCCCCCCCc
Confidence            99999999963211     1345778899999999999998864    222        689999998765431      


Q ss_pred             ------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC-----ChHHHHHHhhhh-cc-----
Q 024976          164 ------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIRSKATDY-MA-----  226 (259)
Q Consensus       164 ------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~-----~~~~~~~~~~~~-~~-----  226 (259)
                            .+...|+.+|.+.+.+++.++.++    |++++.++|+.+..+......     ....+...+... .+     
T Consensus       132 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (312)
T 2yy7_A          132 PQYTIMEPSTVYGISKQAGERWCEYYHNIY----GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSS  207 (312)
T ss_dssp             CSSCBCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCT
T ss_pred             cccCcCCCCchhHHHHHHHHHHHHHHHHhc----CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCC
Confidence                  235679999999999999988776    499999999999865422211     111111211111 11     


Q ss_pred             --CCCCCCHHHHHHHHHHhcCcc
Q 024976          227 --AYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       227 --~~~~~~~~dva~~~~~l~s~~  247 (259)
                        ...+...+|+|++++.++...
T Consensus       208 ~~~~~~i~v~Dva~a~~~~~~~~  230 (312)
T 2yy7_A          208 ETKMPMMYMDDAIDATINIMKAP  230 (312)
T ss_dssp             TCCEEEEEHHHHHHHHHHHHHSC
T ss_pred             CceeeeeeHHHHHHHHHHHHhCc
Confidence              112456899999999988643

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=2.3e-22  Score=159.58  Aligned_cols=189  Identities=14%  Similarity=0.049  Sum_probs=138.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++++||||+|+||++++++|+++|+  +|++++|+.+.          ...++.++.+|++|.+++.+++        
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~--------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS--------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence            468999999999999999999999998  99999998764          1346888899999887665543        


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                       +|+||||+|....      +.++++..+++|+.++..+++++.+    .+.        ++||++||...+.+  +...
T Consensus        66 -~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--------~~~v~~Ss~~~~~~--~~~~  124 (215)
T 2a35_A           66 -IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALE----MGA--------RHYLVVSALGADAK--SSIF  124 (215)
T ss_dssp             -CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHH----TTC--------CEEEEECCTTCCTT--CSSH
T ss_pred             -hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHH----cCC--------CEEEEECCcccCCC--CccH
Confidence             8999999995321      2345778899999999999988754    222        67999999877643  3457


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeE-EEEEecccccCCcccCCCChHHHHHHhhhhcc-CCCCCCHHHHHHHHHHhcCc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIR-VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~-v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~s~  246 (259)
                      |+.+|.+++.+++.        .|++ ++.++||.+.++.....+.+ ..........+ ...+.+++|+|++++.++..
T Consensus       125 y~~sK~~~e~~~~~--------~~~~~~~~vrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  195 (215)
T 2a35_A          125 YNRVKGELEQALQE--------QGWPQLTIARPSLLFGPREEFRLAE-ILAAPIARILPGKYHGIEACDLARALWRLALE  195 (215)
T ss_dssp             HHHHHHHHHHHHTT--------SCCSEEEEEECCSEESTTSCEEGGG-GTTCCCC----CHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHH--------cCCCeEEEEeCceeeCCCCcchHHH-HHHHhhhhccCCCcCcEeHHHHHHHHHHHHhc
Confidence            99999999988763        3698 99999999987643211111 00000000000 11245789999999999876


Q ss_pred             c
Q 024976          247 A  247 (259)
Q Consensus       247 ~  247 (259)
                      .
T Consensus       196 ~  196 (215)
T 2a35_A          196 E  196 (215)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.85  E-value=1e-20  Score=173.87  Aligned_cols=216  Identities=14%  Similarity=0.025  Sum_probs=152.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHH-HHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~-~~~~~~~~~~~   86 (259)
                      ++++++++||||+|+||++++++|+++ |++|++++|+.+..+...     ...++.++.+|++|.++ ++++++     
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~-----  381 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-----  381 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH-----
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc-----
Confidence            357899999999999999999999998 899999999865432211     13468899999999764 555554     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---  163 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  163 (259)
                        ++|+|||+||.....    ...++++..+++|+.++.++++++...             ++++|++||...+...   
T Consensus       382 --~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~-------------~~r~V~~SS~~vyg~~~~~  442 (660)
T 1z7e_A          382 --KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-------------RKRIIFPSTSEVYGMCSDK  442 (660)
T ss_dssp             --HCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-------------TCEEEEECCGGGGBTCCSS
T ss_pred             --CCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHHh-------------CCEEEEEecHHHcCCCCCc
Confidence              589999999964321    123456788999999999999888642             1569999997665321   


Q ss_pred             ---------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC--------CCChHHHHHH
Q 024976          164 ---------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS--------KLAPEEIRSK  220 (259)
Q Consensus       164 ---------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~--------~~~~~~~~~~  220 (259)
                                     .+...|+.+|.+.+.+++.++.++    |++++.++||.+.++....        ......+...
T Consensus       443 ~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~  518 (660)
T 1z7e_A          443 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN  518 (660)
T ss_dssp             SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHH
T ss_pred             ccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECCCcccCCCccccccccccccchHHHHHHH
Confidence                           122379999999999999998775    4999999999998765321        0001122222


Q ss_pred             hhhhcc---------CCCCCCHHHHHHHHHHhcCccCCcccccccc
Q 024976          221 ATDYMA---------AYKFGEKWDIAMAALYLASDAAVHRDLIHLL  257 (259)
Q Consensus       221 ~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~  257 (259)
                      .....+         ...+.+++|+|+++++++.......+|+.+.
T Consensus       519 ~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~n  564 (660)
T 1z7e_A          519 LVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIIN  564 (660)
T ss_dssp             HHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEE
T ss_pred             HHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEE
Confidence            222111         1136679999999999987654344555443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.84  E-value=1.2e-20  Score=160.29  Aligned_cols=206  Identities=13%  Similarity=0.017  Sum_probs=142.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++++++||||+|+||++++++|+++|++|++++|+........+.+. ...++.++.+|+.+..            +
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~   89 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y   89 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h
Confidence            45678999999999999999999999999999999986432111111111 1346889999998752            4


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------  161 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  161 (259)
                      .++|+|||+||.......    .++++..+++|+.++.++++++...    +         .++|++||...+.      
T Consensus        90 ~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~----~---------~~~v~~SS~~v~g~~~~~~  152 (343)
T 2b69_A           90 IEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV----G---------ARLLLASTSEVYGDPEVHP  152 (343)
T ss_dssp             CCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH----T---------CEEEEEEEGGGGBSCSSSS
T ss_pred             cCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHHh----C---------CcEEEECcHHHhCCCCCCC
Confidence            579999999996432111    1235678899999999999988653    1         4699999976542      


Q ss_pred             ----------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhcc---
Q 024976          162 ----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMA---  226 (259)
Q Consensus       162 ----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~---  226 (259)
                                +..+...|+.+|.+.+.+++.++.++    |++++.++||.+.++.......  -...........+   
T Consensus       153 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (343)
T 2b69_A          153 QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV  228 (343)
T ss_dssp             BCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEE
T ss_pred             CcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceE
Confidence                      22345679999999999999988775    4999999999998765322110  1112221111111   


Q ss_pred             ------CCCCCCHHHHHHHHHHhcCcc
Q 024976          227 ------AYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       227 ------~~~~~~~~dva~~~~~l~s~~  247 (259)
                            ...+...+|+|++++.++...
T Consensus       229 ~~~~~~~~~~v~v~Dva~a~~~~~~~~  255 (343)
T 2b69_A          229 YGSGSQTRAFQYVSDLVNGLVALMNSN  255 (343)
T ss_dssp             ESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred             cCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence                  123568999999999998653

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.84  E-value=2.7e-20  Score=164.99  Aligned_cols=169  Identities=17%  Similarity=0.049  Sum_probs=128.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHc---CCeEEEEeCChhhHHHHHHHHH---------------hcCCCeEEEEcC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKH---GAAIAIMGRRKTVLRSAVAALH---------------SLGIPAIGLEGD   69 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~---G~~vv~~~r~~~~~~~~~~~~~---------------~~~~~v~~~~~D   69 (259)
                      ...++|+++||||+|+||++++++|+++   |++|++++|+.+......+...               ....++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            4567899999999999999999999999   9999999998664322221111               113579999999


Q ss_pred             CC------CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCC
Q 024976           70 VR------KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  143 (259)
Q Consensus        70 l~------~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  143 (259)
                      ++      +.+.++++++       ++|+||||||....        +.++..+++|+.++.++++++..    .+.   
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~~---  206 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT----TKL---  206 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS----SSC---
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh----CCC---
Confidence            99      6667777665       58999999997543        23457889999999999988753    221   


Q ss_pred             CCCCCceEEEeccccccccCcc----------------------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecc
Q 024976          144 SSSSGGIIINISATLHYTATWY----------------------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  201 (259)
Q Consensus       144 ~~~~~g~iv~isS~~~~~~~~~----------------------~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg  201 (259)
                           .+||++||...+.....                      ...|+.||.+.+.+++.++.+.    |++++.++||
T Consensus       207 -----~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ivRpg  277 (478)
T 4dqv_A          207 -----KPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC----ALPVAVFRCG  277 (478)
T ss_dssp             -----CCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH----CCCEEEEEEC
T ss_pred             -----CeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh----CCCeEEEECc
Confidence                 57999999765432111                      1339999999999999988765    4999999999


Q ss_pred             cccCCc
Q 024976          202 PIKDTA  207 (259)
Q Consensus       202 ~v~t~~  207 (259)
                      .+..+.
T Consensus       278 ~v~G~~  283 (478)
T 4dqv_A          278 MILADT  283 (478)
T ss_dssp             EEECCS
T ss_pred             eeeCCC
Confidence            998653

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.84  E-value=2.5e-20  Score=153.16  Aligned_cols=183  Identities=16%  Similarity=0.109  Sum_probs=133.2

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||+|+||++++++|+ +|++|++++|+.+. +        .  .   +.+|++|++++.++++..     ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~--~---~~~Dl~~~~~~~~~~~~~-----~~d~v   61 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------G--G---YKLDLTDFPRLEDFIIKK-----RPDVI   61 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------T--C---EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------C--C---ceeccCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999 48999999998642 1        1  1   789999999999998765     69999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc---------
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW---------  164 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  164 (259)
                      |||||....    +.+.++++..+++|+.++.++++++.+    .         +++||++||...+.+.+         
T Consensus        62 i~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~---------~~~iv~~SS~~~~~~~~~~~~e~~~~  124 (273)
T 2ggs_A           62 INAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----I---------DSYIVHISTDYVFDGEKGNYKEEDIP  124 (273)
T ss_dssp             EECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T---------TCEEEEEEEGGGSCSSSCSBCTTSCC
T ss_pred             EECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h---------CCeEEEEecceeEcCCCCCcCCCCCC
Confidence            999996432    123467889999999999999999864    2         26899999988765432         


Q ss_pred             -cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc------CCCCCCHHHHH
Q 024976          165 -YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA------AYKFGEKWDIA  237 (259)
Q Consensus       165 -~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva  237 (259)
                       +...|+.+|++++.+++.    +. ...||++.|. |  .+     .+ ............+      ..++.+++|+|
T Consensus       125 ~~~~~Y~~sK~~~e~~~~~----~~-~~~iR~~~v~-G--~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  190 (273)
T 2ggs_A          125 NPINYYGLSKLLGETFALQ----DD-SLIIRTSGIF-R--NK-----GF-PIYVYKTLKEGKTVFAFKGYYSPISARKLA  190 (273)
T ss_dssp             CCSSHHHHHHHHHHHHHCC----TT-CEEEEECCCB-S--SS-----SH-HHHHHHHHHTTCCEEEESCEECCCBHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhC----CC-eEEEeccccc-c--cc-----HH-HHHHHHHHHcCCCEEeecCCCCceEHHHHH
Confidence             256899999999999887    32 3334444444 3  11     11 1122111111111      34678999999


Q ss_pred             HHHHHhcCcc
Q 024976          238 MAALYLASDA  247 (259)
Q Consensus       238 ~~~~~l~s~~  247 (259)
                      ++++++++..
T Consensus       191 ~~i~~~~~~~  200 (273)
T 2ggs_A          191 SAILELLELR  200 (273)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHhcC
Confidence            9999999754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.83  E-value=1e-19  Score=152.65  Aligned_cols=196  Identities=15%  Similarity=0.055  Sum_probs=141.2

Q ss_pred             EEEEeCCccchHHHHHHHHHHc--CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           14 VALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++||||+|+||++++++|+++  |++|++++|+....+           .+.++.+|++|.+++.+++++     .++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~-----~~~d   64 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK-----YSID   64 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH-----TTCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh-----cCCc
Confidence            4899999999999999999999  889999998754321           367899999999999988864     2699


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------  163 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  163 (259)
                      +|||+|+....     ...++++..+++|+.++.++++++.+    .+.        +++|++||...+.+.        
T Consensus        65 ~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~--------~~~v~~SS~~~~~~~~~~~~~~e  127 (317)
T 3ajr_A           65 AIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQ----HRV--------EKVVIPSTIGVFGPETPKNKVPS  127 (317)
T ss_dssp             EEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTC--------CEEEEEEEGGGCCTTSCSSSBCS
T ss_pred             EEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHH----cCC--------CEEEEecCHHHhCCCCCCCCccc
Confidence            99999996321     12345778899999999999998864    222        689999998766432        


Q ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC-----ChHHHHHHhhhh-cc-------
Q 024976          164 ----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIRSKATDY-MA-------  226 (259)
Q Consensus       164 ----~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~-----~~~~~~~~~~~~-~~-------  226 (259)
                          .+...|+.+|.+.+.+++.++.++    |++++.++|+.+..+......     ....+....... .+       
T Consensus       128 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (317)
T 3ajr_A          128 ITITRPRTMFGVTKIAAELLGQYYYEKF----GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNR  203 (317)
T ss_dssp             SSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTC
T ss_pred             cccCCCCchHHHHHHHHHHHHHHHHHhc----CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccc
Confidence                135689999999999999888765    499999987666654321111     011111111111 00       


Q ss_pred             CCCCCCHHHHHHHHHHhcCc
Q 024976          227 AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~  246 (259)
                      ...+...+|++++++.++..
T Consensus       204 ~~~~i~v~Dva~a~~~~l~~  223 (317)
T 3ajr_A          204 ALPMMYMPDALKALVDLYEA  223 (317)
T ss_dssp             CEEEEEHHHHHHHHHHHHHC
T ss_pred             eeeeeEHHHHHHHHHHHHhC
Confidence            01134689999999887753

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.83  E-value=1.5e-19  Score=151.97  Aligned_cols=192  Identities=14%  Similarity=0.067  Sum_probs=140.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+++++||||+|+||++++++|+++|++|++++|+.                    .+|++|.+++.+++++.     ++
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----~~   56 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RI   56 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc-----CC
Confidence            357999999999999999999999999999888762                    36999999999888754     69


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--------  162 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------  162 (259)
                      |+|||+|+.....   ....++++..+++|+.++.++++++..    .+.        .++|++||...+..        
T Consensus        57 d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--------~~~v~~SS~~vyg~~~~~~~~E  121 (321)
T 1e6u_A           57 DQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAHQ----NDV--------NKLLFLGSSCIYPKLAKQPMAE  121 (321)
T ss_dssp             SEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTC--------CEEEEECCGGGSCTTCCSSBCG
T ss_pred             CEEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHHH----hCC--------CeEEEEccHHHcCCCCCCCcCc
Confidence            9999999963211   112345678899999999999988864    222        57999999876521        


Q ss_pred             --------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----ChHHHHHHhhh-------
Q 024976          163 --------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATD-------  223 (259)
Q Consensus       163 --------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~-------  223 (259)
                              .+....|+.+|.+.+.+++.++.++    |++++.++|+.+..+......    .-......+..       
T Consensus       122 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  197 (321)
T 1e6u_A          122 SELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY----GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAP  197 (321)
T ss_dssp             GGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCS
T ss_pred             cccccCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCC
Confidence                    1123589999999999999998765    499999999999876543211    11122222211       


Q ss_pred             hcc-------CCCCCCHHHHHHHHHHhcCc
Q 024976          224 YMA-------AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       224 ~~~-------~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..+       ...+...+|+|++++.++..
T Consensus       198 ~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~  227 (321)
T 1e6u_A          198 DVVVWGSGTPMREFLHVDDMAAASIHVMEL  227 (321)
T ss_dssp             EEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred             ceEEcCCCCEEEEeEEHHHHHHHHHHHHhC
Confidence            111       11245799999999998854

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.82  E-value=1.4e-19  Score=167.36  Aligned_cols=182  Identities=16%  Similarity=0.067  Sum_probs=131.0

Q ss_pred             CCCCCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHH
Q 024976            1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRV   79 (259)
Q Consensus         1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~   79 (259)
                      |.+.+ ++.+++|+++||||+|+||++++++|+++|++|++++|+........+.+.. .+.++.++.+|++|.+++.++
T Consensus         1 m~~~~-~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~   79 (699)
T 1z45_A            1 MTAQL-QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKV   79 (699)
T ss_dssp             -----------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHH
T ss_pred             CCccc-ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHH
Confidence            44432 3456889999999999999999999999999999999875432222222221 134688999999999999888


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        80 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      +++.     ++|+|||+||......    ..+.....+++|+.++.++++++..    .+.        ++||++||...
T Consensus        80 ~~~~-----~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~--------~~iV~~SS~~v  138 (699)
T 1z45_A           80 FKEY-----KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQ----YNV--------SKFVFSSSATV  138 (699)
T ss_dssp             HHHS-----CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----HTC--------CEEEEEEEGGG
T ss_pred             HHhC-----CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHHH----cCC--------CEEEEECcHHH
Confidence            7653     7999999999643211    1233456889999999999877653    222        78999999765


Q ss_pred             ccc---------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCC
Q 024976          160 YTA---------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  206 (259)
Q Consensus       160 ~~~---------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~  206 (259)
                      +..               ..+...|+.+|++++.+++.++.+.  ..|+++..++|+.+..+
T Consensus       139 yg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          139 YGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             GCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEECC
T ss_pred             hCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc--cCCCcEEEEEeccccCC
Confidence            421               1234689999999999999998874  35799999999888754

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.82  E-value=2.4e-20  Score=155.87  Aligned_cols=202  Identities=14%  Similarity=0.125  Sum_probs=140.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +++||||+|+||++++++|+++| ++|++++|+.....  .+.+..    +. +.+|+++.+.++++++...  ++++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~----~~-~~~d~~~~~~~~~~~~~~~--~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD----LN-IADYMDKEDFLIQIMAGEE--FGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT----SC-CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc----ce-eccccccHHHHHHHHhccc--cCCCcE
Confidence            48999999999999999999999 89999998765321  111221    22 6789999888877765210  236999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------  163 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  163 (259)
                      |||+||....      ..++++..+++|+.++.++++++.+.    +         .++|++||...+...         
T Consensus        72 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~---------~~~v~~SS~~v~g~~~~~~~~E~~  132 (310)
T 1eq2_A           72 IFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E---------IPFLYASSAATYGGRTSDFIESRE  132 (310)
T ss_dssp             EEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T---------CCEEEEEEGGGGTTCCSCBCSSGG
T ss_pred             EEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHc----C---------CeEEEEeeHHHhCCCCCCCCCCCC
Confidence            9999996432      22346788999999999999998753    1         259999998654322         


Q ss_pred             --ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC----CChHHHHHHhhh---------hcc-C
Q 024976          164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATD---------YMA-A  227 (259)
Q Consensus       164 --~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~~~~---------~~~-~  227 (259)
                        .+...|+.+|.+.+.+++.++.+    .|++++.++||.+.++.....    ..-..+......         ... .
T Consensus       133 ~~~p~~~Y~~sK~~~e~~~~~~~~~----~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  208 (310)
T 1eq2_A          133 YEKPLNVYGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK  208 (310)
T ss_dssp             GCCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------C
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcce
Confidence              22457999999999999988764    369999999999987653211    001111111111         111 2


Q ss_pred             CCCCCHHHHHHHHHHhcCcc
Q 024976          228 YKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       228 ~~~~~~~dva~~~~~l~s~~  247 (259)
                      ..+...+|+|++++.++...
T Consensus       209 ~~~i~v~Dva~~~~~~~~~~  228 (310)
T 1eq2_A          209 RDFVYVGDVADVNLWFLENG  228 (310)
T ss_dssp             BCEEEHHHHHHHHHHHHHHC
T ss_pred             EccEEHHHHHHHHHHHHhcC
Confidence            23567899999999988643

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.81  E-value=1.7e-19  Score=149.38  Aligned_cols=183  Identities=13%  Similarity=0.090  Sum_probs=136.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++||||+|+||++++++|+++|++|++++|.                     .+|++|.+++.+++++.     ++|+
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~d~   59 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI-----RPHI   59 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH-----CCSE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc-----CCCE
Confidence            389999999999999999999999999999982                     37999999999998765     6999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------  163 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  163 (259)
                      |||+||.....    ...++++..+++|+.++.++++++.+.    +         .++|++||...+.+.         
T Consensus        60 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---------~~~v~~SS~~vy~~~~~~~~~E~~  122 (287)
T 3sc6_A           60 IIHCAAYTKVD----QAEKERDLAYVINAIGARNVAVASQLV----G---------AKLVYISTDYVFQGDRPEGYDEFH  122 (287)
T ss_dssp             EEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHHHH----T---------CEEEEEEEGGGSCCCCSSCBCTTS
T ss_pred             EEECCcccChH----HHhcCHHHHHHHHHHHHHHHHHHHHHc----C---------CeEEEEchhhhcCCCCCCCCCCCC
Confidence            99999964321    122457889999999999999998643    1         569999998765322         


Q ss_pred             --ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc-------CCCCCCHH
Q 024976          164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKW  234 (259)
Q Consensus       164 --~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  234 (259)
                        .+...|+.+|.+.+.+++.++.        +++.++|+.+.++... .+. ...........+       ...+..++
T Consensus       123 ~~~p~~~Y~~sK~~~E~~~~~~~~--------~~~ilR~~~v~G~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~  192 (287)
T 3sc6_A          123 NPAPINIYGASKYAGEQFVKELHN--------KYFIVRTSWLYGKYGN-NFV-KTMIRLGKEREEISVVADQIGSPTYVA  192 (287)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHCS--------SEEEEEECSEECSSSC-CHH-HHHHHHHTTCSEEEEECSCEECCEEHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCC--------CcEEEeeeeecCCCCC-cHH-HHHHHHHHcCCCeEeecCcccCceEHH
Confidence              2356899999999998886532        4588999999865422 111 222222221111       12356699


Q ss_pred             HHHHHHHHhcCccC
Q 024976          235 DIAMAALYLASDAA  248 (259)
Q Consensus       235 dva~~~~~l~s~~~  248 (259)
                      |+|+++++++....
T Consensus       193 Dva~~~~~~~~~~~  206 (287)
T 3sc6_A          193 DLNVMINKLIHTSL  206 (287)
T ss_dssp             HHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999997644

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.80  E-value=8.3e-19  Score=145.08  Aligned_cols=184  Identities=14%  Similarity=0.045  Sum_probs=132.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHc--CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      |+++||||+|+||++++++|+++  |++|++++|+.++.+.+.    .  .++.++.+|++|.+++.++++       ++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~-------~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA-------GV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh-------cC
Confidence            47999999999999999999999  999999999876544322    1  257899999999998887765       58


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  170 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  170 (259)
                      |+|||+|+...       . +      ++|+.++.++++++..    .+.        ++||++||...+.   ....|+
T Consensus        68 d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~~~----~~~--------~~~v~~Ss~~~~~---~~~~y~  118 (287)
T 2jl1_A           68 SKLLFISGPHY-------D-N------TLLIVQHANVVKAARD----AGV--------KHIAYTGYAFAEE---SIIPLA  118 (287)
T ss_dssp             SEEEECCCCCS-------C-H------HHHHHHHHHHHHHHHH----TTC--------SEEEEEEETTGGG---CCSTHH
T ss_pred             CEEEEcCCCCc-------C-c------hHHHHHHHHHHHHHHH----cCC--------CEEEEECCCCCCC---CCCchH
Confidence            99999999521       1 1      5688888888877743    332        6899999987642   224799


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhh---hhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT---DYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       171 ~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .+|.+.+.+.+.        .|++++.++||.+.++.... ...........   .......+.+++|++++++.++...
T Consensus       119 ~~K~~~E~~~~~--------~~~~~~ilrp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  189 (287)
T 2jl1_A          119 HVHLATEYAIRT--------TNIPYTFLRNALYTDFFVNE-GLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE  189 (287)
T ss_dssp             HHHHHHHHHHHH--------TTCCEEEEEECCBHHHHSSG-GGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHH--------cCCCeEEEECCEeccccchh-hHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC
Confidence            999999988752        36999999999886432111 11111111100   0011235788999999999998754

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.80  E-value=7.3e-19  Score=156.94  Aligned_cols=205  Identities=14%  Similarity=0.026  Sum_probs=143.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh---HHHHHHHHHh---------cCCCeEEEEcCCCCHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV---LRSAVAALHS---------LGIPAIGLEGDVRKREDAVR   78 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~---~~~~~~~~~~---------~~~~v~~~~~Dl~~~~~~~~   78 (259)
                      ..++++||||+|+||++++++|.+.|++|+++.|+...   .+.+.+.+..         ...++.++.+|+++++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            35799999999999999999999999999999998763   2333333321         2467999999999987776 


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                             ...++|+|||||+...       ...++...+++|+.++.++++++..     .        ..++|++||..
T Consensus       228 -------~~~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~--------~~~~v~iSS~~  280 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H--------HARLIYVSTIS  280 (508)
T ss_dssp             -------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----T--------TCEEEEEEESC
T ss_pred             -------CccCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----C--------CCcEEEeCChh
Confidence                   3468999999999642       1235678889999999999998865     1        26799999977


Q ss_pred             c--cc----------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC----h--
Q 024976          159 H--YT----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----P--  214 (259)
Q Consensus       159 ~--~~----------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~----~--  214 (259)
                      .  +.                +......|+.+|.+.+.+++.++.     .|++++.++||.+.++.....+.    .  
T Consensus       281 vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~  355 (508)
T 4f6l_B          281 VGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNR  355 (508)
T ss_dssp             TTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH-----TTCEEEEEEECCEESCSSSCCCCTTCTTCH
T ss_pred             hccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH-----cCCCEEEEecceeccCCCCCcccCCcchHH
Confidence            6  10                012456799999999999987642     37999999999998765433211    1  


Q ss_pred             -HHHHHHhhh--hccC------CCCCCHHHHHHHHHHhcCccC
Q 024976          215 -EEIRSKATD--YMAA------YKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       215 -~~~~~~~~~--~~~~------~~~~~~~dva~~~~~l~s~~~  248 (259)
                       .........  ..|.      ..+...+|+|+++++++....
T Consensus       356 ~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~  398 (508)
T 4f6l_B          356 FSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT  398 (508)
T ss_dssp             HHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC
T ss_pred             HHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC
Confidence             111221111  1221      125668999999999997643

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.79  E-value=4e-20  Score=155.20  Aligned_cols=201  Identities=10%  Similarity=-0.008  Sum_probs=134.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh--cCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++++||||+|+||++++++|+++|++|++++|+........+.+..  ...++.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            4578999999999999999999999999999999976510000000100  1123455556655                


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----  163 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  163 (259)
                       ++|+|||+|+.......    .++....++ |+.++.++++++...    +.        .+||++||...+...    
T Consensus        69 -~~d~vi~~a~~~~~~~~----~~~~~~~~~-n~~~~~~ll~a~~~~----~v--------~~~v~~SS~~v~~~~~~~~  130 (321)
T 3vps_A           69 -DVRLVYHLASHKSVPRS----FKQPLDYLD-NVDSGRHLLALCTSV----GV--------PKVVVGSTCEVYGQADTLP  130 (321)
T ss_dssp             -TEEEEEECCCCCCHHHH----TTSTTTTHH-HHHHHHHHHHHHHHH----TC--------CEEEEEEEGGGGCSCSSSS
T ss_pred             -cCCEEEECCccCChHHH----HhCHHHHHH-HHHHHHHHHHHHHHc----CC--------CeEEEecCHHHhCCCCCCC
Confidence             69999999996532111    112234556 999999998888653    22        679999997765332    


Q ss_pred             -------ccchhhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecccccCCcccCCCChHHHHHHhhhhcc---------
Q 024976          164 -------WYQIHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA---------  226 (259)
Q Consensus       164 -------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi-~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------  226 (259)
                             .+...|+.+|.+.+.+++.++.+.    |+ +++.++|+.+.++...................+         
T Consensus       131 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (321)
T 3vps_A          131 TPEDSPLSPRSPYAASKVGLEMVAGAHQRAS----VAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQ  206 (321)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS----SSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCC
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCc
Confidence                   235679999999999999888754    58 999999999987654432212222222222111         


Q ss_pred             CCCCCCHHHHHHHHHHhcCccC
Q 024976          227 AYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      ...+...+|+|+++++++....
T Consensus       207 ~~~~v~v~Dva~~~~~~~~~~~  228 (321)
T 3vps_A          207 RRDFTYITDVVDKLVALANRPL  228 (321)
T ss_dssp             EECEEEHHHHHHHHHHGGGSCC
T ss_pred             eEceEEHHHHHHHHHHHHhcCC
Confidence            1135679999999999997654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.79  E-value=3.3e-19  Score=148.35  Aligned_cols=184  Identities=14%  Similarity=0.069  Sum_probs=134.5

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++||||+|+||++++++|+ +|++|++++|+..                 ++.+|++|.+++.++++..     ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d~v   58 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPDVI   58 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999 8999999998752                 3578999999999888754     69999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----------
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------  163 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  163 (259)
                      ||+||.....    ...++++..+++|+.++.++++++..    .         +.++|++||...+.+.          
T Consensus        59 ih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~---------~~~~v~~SS~~vy~~~~~~~~~E~~~  121 (299)
T 1n2s_A           59 VNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAANE----T---------GAWVVHYSTDYVFPGTGDIPWQETDA  121 (299)
T ss_dssp             EECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTT----T---------TCEEEEEEEGGGSCCCTTCCBCTTSC
T ss_pred             EECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHHH----c---------CCcEEEEecccEEeCCCCCCCCCCCC
Confidence            9999964311    12245678899999999999998842    1         1479999998665332          


Q ss_pred             -ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc-------CCCCCCHHH
Q 024976          164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWD  235 (259)
Q Consensus       164 -~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d  235 (259)
                       .+...|+.+|.+.+.+++.+    .    .+++.++|+.+.++... .+. ...........+       ...+..++|
T Consensus       122 ~~p~~~Y~~sK~~~E~~~~~~----~----~~~~ilRp~~v~G~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D  191 (299)
T 1n2s_A          122 TSPLNVYGKTKLAGEKALQDN----C----PKHLIFRTSWVYAGKGN-NFA-KTMLRLAKERQTLSVINDQYGAPTGAEL  191 (299)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHH----C----SSEEEEEECSEECSSSC-CHH-HHHHHHHHHCSEEEEECSCEECCEEHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHh----C----CCeEEEeeeeecCCCcC-cHH-HHHHHHHhcCCCEEeecCcccCCeeHHH
Confidence             22568999999999888764    3    27899999999876432 111 222222221111       123456999


Q ss_pred             HHHHHHHhcCcc
Q 024976          236 IAMAALYLASDA  247 (259)
Q Consensus       236 va~~~~~l~s~~  247 (259)
                      +++++++++...
T Consensus       192 va~~~~~~~~~~  203 (299)
T 1n2s_A          192 LADCTAHAIRVA  203 (299)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999998653

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.78  E-value=1.7e-18  Score=144.74  Aligned_cols=197  Identities=13%  Similarity=0.062  Sum_probs=137.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++++++||||+|+||++++++|.++|+      +...           ....+.++.+|++|.+++.++++..     
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~-----   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----------DWVFVSSKDADLTDTAQTRALFEKV-----   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----------EEEECCTTTCCTTSHHHHHHHHHHS-----
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----------cccccCceecccCCHHHHHHHHhhc-----
Confidence            35678999999999999999999999997      1100           0112344579999999999988753     


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------  162 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------  162 (259)
                      ++|+|||+|+.....   ..+.++....+++|+.++.++++++..    .+.        .++|++||...+..      
T Consensus        61 ~~d~Vih~A~~~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~--------~~~v~~SS~~vyg~~~~~~~  125 (319)
T 4b8w_A           61 QPTHVIHLAAMVGGL---FRNIKYNLDFWRKNVHMNDNVLHSAFE----VGA--------RKVVSCLSTCIFPDKTTYPI  125 (319)
T ss_dssp             CCSEEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTC--------SEEEEECCGGGSCSSCCSSB
T ss_pred             CCCEEEECceecccc---cccccCHHHHHHHHHHHHHHHHHHHHH----cCC--------CeEEEEcchhhcCCCCCCCc
Confidence            699999999963211   112234567899999999999988754    222        57999999865421      


Q ss_pred             ----------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC----hHHHHHH----hhhh
Q 024976          163 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSK----ATDY  224 (259)
Q Consensus       163 ----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~----~~~~~~~----~~~~  224 (259)
                                .+....|+.+|.+.+.+++.++.+.    |++++.++|+.+..+.......    -..+...    ....
T Consensus       126 ~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (319)
T 4b8w_A          126 DETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY----GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSG  201 (319)
T ss_dssp             CGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHT
T ss_pred             cccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh----CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccC
Confidence                      1222369999999999999998876    4999999999998765432111    1112222    1111


Q ss_pred             cc---------CCCCCCHHHHHHHHHHhcCc
Q 024976          225 MA---------AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       225 ~~---------~~~~~~~~dva~~~~~l~s~  246 (259)
                      .+         ...+...+|+|++++.++..
T Consensus       202 ~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  232 (319)
T 4b8w_A          202 SALTVWGTGNPRRQFIYSLDLAQLFIWVLRE  232 (319)
T ss_dssp             CCEEEESCSCCEECEEEHHHHHHHHHHHHHH
T ss_pred             CceEEeCCCCeeEEEEeHHHHHHHHHHHHhc
Confidence            11         11246799999999999865

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.78  E-value=2.6e-19  Score=148.22  Aligned_cols=183  Identities=14%  Similarity=0.051  Sum_probs=132.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++++++||| +|+||++++++|+++|++|++++|+.+.+          ..++.++.+|++|.+++.++++      +++
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~~~   64 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH------LRP   64 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------GCC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc------CCC
Confidence            357899999 59999999999999999999999986642          3468899999999998877665      369


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------  163 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  163 (259)
                      |+|||+||..         ..+.+..+++|+.++.++++++.    +.+.        ++||++||...+...       
T Consensus        65 d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~~--------~~~v~~SS~~vyg~~~~~~~~E  123 (286)
T 3gpi_A           65 EILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALE----GAPL--------QHVFFVSSTGVYGQEVEEWLDE  123 (286)
T ss_dssp             SEEEECHHHH---------HHC-----CCSHHHHHHHHHHTT----TSCC--------CEEEEEEEGGGCCCCCSSEECT
T ss_pred             CEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHh----hCCC--------CEEEEEcccEEEcCCCCCCCCC
Confidence            9999999952         24456788899999999988875    2322        689999997654322       


Q ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhh------hccCCCCCCH
Q 024976          164 ----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD------YMAAYKFGEK  233 (259)
Q Consensus       164 ----~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  233 (259)
                          .+...|+.+|.+.+.+ +..         ++++.++|+.+.++...      .+...+.+      ......+...
T Consensus       124 ~~~~~p~~~Y~~sK~~~E~~-~~~---------~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~i~v  187 (286)
T 3gpi_A          124 DTPPIAKDFSGKRMLEAEAL-LAA---------YSSTILRFSGIYGPGRL------RMIRQAQTPEQWPARNAWTNRIHR  187 (286)
T ss_dssp             TSCCCCCSHHHHHHHHHHHH-GGG---------SSEEEEEECEEEBTTBC------HHHHHTTCGGGSCSSBCEECEEEH
T ss_pred             CCCCCCCChhhHHHHHHHHH-Hhc---------CCeEEEecccccCCCch------hHHHHHHhcccCCCcCceeEEEEH
Confidence                2356899999998877 532         68899999999865432      11111111      1112235678


Q ss_pred             HHHHHHHHHhcCcc
Q 024976          234 WDIAMAALYLASDA  247 (259)
Q Consensus       234 ~dva~~~~~l~s~~  247 (259)
                      +|+|+++++++...
T Consensus       188 ~Dva~~~~~~~~~~  201 (286)
T 3gpi_A          188 DDGAAFIAYLIQQR  201 (286)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhh
Confidence            99999999998753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.76  E-value=6.1e-18  Score=139.71  Aligned_cols=180  Identities=13%  Similarity=0.079  Sum_probs=124.0

Q ss_pred             EEEEeCCccchHHHHHHHHHHc--CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           14 VALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++||||+|+||++++++|+++  |++|++++|+.++.+.+.    .  ..+.++.+|++|.+++.++++       ++|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~~-------~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSALQ-------GVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHHh-------CCC
Confidence            4899999999999999999999  999999999876544322    1  257889999999998887764       689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +|||++|...                +.|+.++.++++++.    +.+.        ++||++||...+.   ....|+.
T Consensus        68 ~vi~~a~~~~----------------~~~~~~~~~l~~a~~----~~~~--------~~~v~~Ss~~~~~---~~~~y~~  116 (286)
T 2zcu_A           68 KLLLISSSEV----------------GQRAPQHRNVINAAK----AAGV--------KFIAYTSLLHADT---SPLGLAD  116 (286)
T ss_dssp             EEEECC------------------------CHHHHHHHHHH----HHTC--------CEEEEEEETTTTT---CCSTTHH
T ss_pred             EEEEeCCCCc----------------hHHHHHHHHHHHHHH----HcCC--------CEEEEECCCCCCC---CcchhHH
Confidence            9999999421                135666666666554    3332        6899999987752   2347999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhh---hhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT---DYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      +|.+.+.+.+.        .|++++.++||.+.++ ....+ .........   .......+.+++|+|+++++++...
T Consensus       117 sK~~~e~~~~~--------~~~~~~ilrp~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  185 (286)
T 2zcu_A          117 EHIETEKMLAD--------SGIVYTLLRNGWYSEN-YLASA-PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEA  185 (286)
T ss_dssp             HHHHHHHHHHH--------HCSEEEEEEECCBHHH-HHTTH-HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHH--------cCCCeEEEeChHHhhh-hHHHh-HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCC
Confidence            99999988763        2599999999987632 21111 111111100   0112234778999999999998754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.76  E-value=2.3e-18  Score=143.44  Aligned_cols=192  Identities=11%  Similarity=0.003  Sum_probs=127.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|+++||||+|+||++++++|+++| ++|++++|+.+....  +.+..  ..+.++.+|++|.+++.++++       ++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~~-------~~   73 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELALN-------GA   73 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHHh-------cC
Confidence            5799999999999999999999999 999999998765421  22322  247889999999999888765       59


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--cCccchh
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--ATWYQIH  168 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  168 (259)
                      |+|||+++.....            ..+.|+.+    .+.+++.+++.+.        ++||++|+...+.  .......
T Consensus        74 d~vi~~a~~~~~~------------~~~~~~~~----~~~~~~aa~~~gv--------~~iv~~S~~~~~~~~~~~~~~~  129 (299)
T 2wm3_A           74 YATFIVTNYWESC------------SQEQEVKQ----GKLLADLARRLGL--------HYVVYSGLENIKKLTAGRLAAA  129 (299)
T ss_dssp             SEEEECCCHHHHT------------CHHHHHHH----HHHHHHHHHHHTC--------SEEEECCCCCHHHHTTTSCCCH
T ss_pred             CEEEEeCCCCccc------------cchHHHHH----HHHHHHHHHHcCC--------CEEEEEcCccccccCCCcccCc
Confidence            9999999842100            12234434    4444555555443        7899966644322  1112457


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHH--hhhhccC----CCCCCHHHHHHHHHH
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK--ATDYMAA----YKFGEKWDIAMAALY  242 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~dva~~~~~  242 (259)
                      |+.+|.+++.+.+.        .|++++.++||.+.++.. ..+.+......  ..-..|.    ..+.+++|+|+++..
T Consensus       130 y~~sK~~~e~~~~~--------~gi~~~ilrp~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~  200 (299)
T 2wm3_A          130 HFDGKGEVEEYFRD--------IGVPMTSVRLPCYFENLL-SHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLS  200 (299)
T ss_dssp             HHHHHHHHHHHHHH--------HTCCEEEEECCEEGGGGG-TTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHH
T ss_pred             hhhHHHHHHHHHHH--------CCCCEEEEeecHHhhhch-hhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHH
Confidence            99999999988763        259999999999986432 21111100000  0000111    135689999999999


Q ss_pred             hcCcc
Q 024976          243 LASDA  247 (259)
Q Consensus       243 l~s~~  247 (259)
                      ++...
T Consensus       201 ~l~~~  205 (299)
T 2wm3_A          201 LLKMP  205 (299)
T ss_dssp             HHHSH
T ss_pred             HHcCh
Confidence            98753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.75  E-value=1.9e-17  Score=141.05  Aligned_cols=190  Identities=14%  Similarity=0.072  Sum_probs=127.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcC-CCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD-VRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~D-l~~~~~~~~~~~~~~~~~g~   89 (259)
                      .+++++||||+|+||++++++|+++|++|++++|+.+...  .+.+.. ..++.++.+| ++|.+++.++++       .
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-------~   73 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE-------G   73 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT-------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh-------c
Confidence            4678999999999999999999999999999999876542  123322 2358899999 999999888764       5


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEecccc-ccccCccch
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATL-HYTATWYQI  167 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~isS~~-~~~~~~~~~  167 (259)
                      +|+||||++....               +.|..+     +.+++.+++.+ .        ++||++||.. ...+.....
T Consensus        74 ~d~Vi~~a~~~~~---------------~~~~~~-----~~l~~aa~~~g~v--------~~~V~~SS~~~~~~~~~~~~  125 (352)
T 1xgk_A           74 AHLAFINTTSQAG---------------DEIAIG-----KDLADAAKRAGTI--------QHYIYSSMPDHSLYGPWPAV  125 (352)
T ss_dssp             CSEEEECCCSTTS---------------CHHHHH-----HHHHHHHHHHSCC--------SEEEEEECCCGGGTSSCCCC
T ss_pred             CCEEEEcCCCCCc---------------HHHHHH-----HHHHHHHHHcCCc--------cEEEEeCCccccccCCCCCc
Confidence            8999999974310               123333     44444444443 3        6899999986 333334456


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh---HH-HHH-HhhhhccC---C--CCCCH-HHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EE-IRS-KATDYMAA---Y--KFGEK-WDI  236 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~-~~~-~~~~~~~~---~--~~~~~-~dv  236 (259)
                      .|+.+|.+.+.+++.        .|++++.|+||.+- +.......+   .. ... ...-..+.   .  .+.++ +|+
T Consensus       126 ~y~~sK~~~E~~~~~--------~gi~~~ivrpg~~g-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dv  196 (352)
T 1xgk_A          126 PMWAPKFTVENYVRQ--------LGLPSTFVYAGIYN-NNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDV  196 (352)
T ss_dssp             TTTHHHHHHHHHHHT--------SSSCEEEEEECEEG-GGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHH
T ss_pred             cHHHHHHHHHHHHHH--------cCCCEEEEecceec-CCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHH
Confidence            799999999988873        36999999999764 333221100   00 000 00000011   1  25667 899


Q ss_pred             HHHHHHhcCcc
Q 024976          237 AMAALYLASDA  247 (259)
Q Consensus       237 a~~~~~l~s~~  247 (259)
                      |+++..++...
T Consensus       197 a~ai~~~l~~~  207 (352)
T 1xgk_A          197 GPALLQIFKDG  207 (352)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHhCC
Confidence            99999998653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.74  E-value=2.3e-17  Score=137.64  Aligned_cols=183  Identities=17%  Similarity=0.145  Sum_probs=121.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-------hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-------TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++.+.+ +.+..  ..+.++.+|++|.+++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~~---   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAIK---   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHT---
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHHh---
Confidence            46899999999999999999999999999999986       333332 33332  348899999999998887775   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccccccc--
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLHYT--  161 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~--  161 (259)
                          ++|+|||++|...                   +.+...+++++    ++.+ .        .++|.  |..+..  
T Consensus        76 ----~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v--------~~~v~--S~~g~~~~  118 (307)
T 2gas_A           76 ----QVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGNV--------KKFFP--SEFGLDVD  118 (307)
T ss_dssp             ----TCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCCC--------SEEEC--SCCSSCTT
T ss_pred             ----CCCEEEECCcccc-------------------cccHHHHHHHH----HhcCCc--------eEEee--cccccCcc
Confidence                6999999999532                   23444455444    3333 2        56763  433321  


Q ss_pred             ----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH-------HHHHHhhhhccCCCC
Q 024976          162 ----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-------EIRSKATDYMAAYKF  230 (259)
Q Consensus       162 ----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~  230 (259)
                          ..+....| .+|.+++.+.+.        .|++++.++||.+.+... ..+...       ..............+
T Consensus       119 ~~~~~~p~~~~y-~sK~~~e~~~~~--------~~i~~~~lrp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (307)
T 2gas_A          119 RHDAVEPVRQVF-EEKASIRRVIEA--------EGVPYTYLCCHAFTGYFL-RNLAQLDATDPPRDKVVILGDGNVKGAY  188 (307)
T ss_dssp             SCCCCTTHHHHH-HHHHHHHHHHHH--------HTCCBEEEECCEETTTTG-GGTTCTTCSSCCSSEEEEETTSCSEEEE
T ss_pred             cccCCCcchhHH-HHHHHHHHHHHH--------cCCCeEEEEcceeecccc-ccccccccccCCCCeEEEecCCCcceEE
Confidence                12335678 999998887752        258999999999875322 111100       000000111112236


Q ss_pred             CCHHHHHHHHHHhcCcc
Q 024976          231 GEKWDIAMAALYLASDA  247 (259)
Q Consensus       231 ~~~~dva~~~~~l~s~~  247 (259)
                      .+++|+|+++..++.+.
T Consensus       189 i~~~Dva~~~~~~l~~~  205 (307)
T 2gas_A          189 VTEADVGTFTIRAANDP  205 (307)
T ss_dssp             ECHHHHHHHHHHHHTCG
T ss_pred             eeHHHHHHHHHHHHcCc
Confidence            78999999999999764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.73  E-value=3.8e-17  Score=135.28  Aligned_cols=184  Identities=14%  Similarity=-0.009  Sum_probs=120.8

Q ss_pred             EEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           14 VALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +++||||+|+||++++++|.+. |++|++++|+.++....      ...++.++.+|++|.+++.++++       ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~-------~~d~   68 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK-------GMDT   68 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence            5999999999999999999998 99999999987753321      12468999999999998887764       6999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      |||++|....       .       ..|+.+.    +.+++.+++.+.        ++||++||.......+    |..+
T Consensus        69 vi~~a~~~~~-------~-------~~~~~~~----~~l~~aa~~~gv--------~~iv~~Ss~~~~~~~~----~~~~  118 (289)
T 3e48_A           69 VVFIPSIIHP-------S-------FKRIPEV----ENLVYAAKQSGV--------AHIIFIGYYADQHNNP----FHMS  118 (289)
T ss_dssp             EEECCCCCCS-------H-------HHHHHHH----HHHHHHHHHTTC--------CEEEEEEESCCSTTCC----STTH
T ss_pred             EEEeCCCCcc-------c-------hhhHHHH----HHHHHHHHHcCC--------CEEEEEcccCCCCCCC----Cccc
Confidence            9999995321       1       1244444    444555555543        6899999965433222    2222


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCC----CCCHHHHHHHHHHhcCccC
Q 024976          173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----FGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       173 K~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~dva~~~~~l~s~~~  248 (259)
                      +...     .+...+. ..|++++.++||.+.++.. ..+  ...........+.++    +.+++|+|+++++++....
T Consensus       119 ~~~~-----~~e~~~~-~~g~~~~ilrp~~~~~~~~-~~~--~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~  189 (289)
T 3e48_A          119 PYFG-----YASRLLS-TSGIDYTYVRMAMYMDPLK-PYL--PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPD  189 (289)
T ss_dssp             HHHH-----HHHHHHH-HHCCEEEEEEECEESTTHH-HHH--HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGG
T ss_pred             hhHH-----HHHHHHH-HcCCCEEEEeccccccccH-HHH--HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCC
Confidence            2211     2222333 4579999999999985421 110  111111111122233    6789999999999998765


Q ss_pred             C
Q 024976          249 V  249 (259)
Q Consensus       249 ~  249 (259)
                      .
T Consensus       190 ~  190 (289)
T 3e48_A          190 T  190 (289)
T ss_dssp             G
T ss_pred             c
Confidence            4

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.72  E-value=4.1e-17  Score=138.65  Aligned_cols=189  Identities=15%  Similarity=0.066  Sum_probs=128.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh----hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK----TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~----~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..++++||||+|+||++++++|+++|++|++++|+.    ++.+ ..+.+..  .++.++.+|++|.+++.+++++.   
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhhC---
Confidence            467999999999999999999999999999999976    2222 2223332  46899999999999999988753   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc----cc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY----TA  162 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----~~  162 (259)
                        ++|+|||++|.                   .|+.+..++++++...-   ..        .++|+ |+....    .+
T Consensus        83 --~~d~Vi~~a~~-------------------~n~~~~~~l~~aa~~~g---~v--------~~~v~-S~~g~~~~e~~~  129 (346)
T 3i6i_A           83 --EIDIVVSTVGG-------------------ESILDQIALVKAMKAVG---TI--------KRFLP-SEFGHDVNRADP  129 (346)
T ss_dssp             --TCCEEEECCCG-------------------GGGGGHHHHHHHHHHHC---CC--------SEEEC-SCCSSCTTTCCC
T ss_pred             --CCCEEEECCch-------------------hhHHHHHHHHHHHHHcC---Cc--------eEEee-cccCCCCCccCc
Confidence              69999999995                   27888888887775431   02        45664 433221    12


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHH-------HHhhhhccCCCCCCHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR-------SKATDYMAAYKFGEKWD  235 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d  235 (259)
                      ..+...|+.+|.+++.+.+.        .|++++.++||.+... +...+......       ...........+.+.+|
T Consensus       130 ~~p~~~y~~sK~~~e~~l~~--------~g~~~tivrpg~~~g~-~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~D  200 (346)
T 3i6i_A          130 VEPGLNMYREKRRVRQLVEE--------SGIPFTYICCNSIASW-PYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTD  200 (346)
T ss_dssp             CTTHHHHHHHHHHHHHHHHH--------TTCCBEEEECCEESSC-CCSCC-----CCCCSSCEEEETTSCCCEEEECHHH
T ss_pred             CCCcchHHHHHHHHHHHHHH--------cCCCEEEEEecccccc-cCccccccccccCCCceEEEccCCCceEEecCHHH
Confidence            24567899999998877763        3699999999988743 22222111100       00111111223678999


Q ss_pred             HHHHHHHhcCcc
Q 024976          236 IAMAALYLASDA  247 (259)
Q Consensus       236 va~~~~~l~s~~  247 (259)
                      +|++++.++...
T Consensus       201 va~~~~~~l~~~  212 (346)
T 3i6i_A          201 IGKFTMKTVDDV  212 (346)
T ss_dssp             HHHHHHHHTTCG
T ss_pred             HHHHHHHHHhCc
Confidence            999999999764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.71  E-value=4.7e-17  Score=139.46  Aligned_cols=178  Identities=13%  Similarity=-0.003  Sum_probs=130.8

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ++++||||+|+||++++++|+++|+ +|+.++|+                         +|.++++++++       ++|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~-------~~d   48 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL-------KAD   48 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH-------HCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc-------cCC
Confidence            3699999999999999999999998 77776664                         67888888776       489


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +|||+||....        +++...+++|+.++.++++++.    +.+.       ..++|++||...+.    ...|+.
T Consensus        49 ~Vih~a~~~~~--------~~~~~~~~~n~~~~~~l~~a~~----~~~~-------~~~~v~~Ss~~~~~----~~~Y~~  105 (369)
T 3st7_A           49 FIVHLAGVNRP--------EHDKEFSLGNVSYLDHVLDILT----RNTK-------KPAILLSSSIQATQ----DNPYGE  105 (369)
T ss_dssp             EEEECCCSBCT--------TCSTTCSSSCCBHHHHHHHHHT----TCSS-------CCEEEEEEEGGGGS----CSHHHH
T ss_pred             EEEECCcCCCC--------CCHHHHHHHHHHHHHHHHHHHH----HhCC-------CCeEEEeCchhhcC----CCCchH
Confidence            99999996432        2345578899999999988874    2221       13799999987665    567999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhccC--------CCCCCHHHHHHHHH
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAA--------YKFGEKWDIAMAAL  241 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~dva~~~~  241 (259)
                      +|.+.+.+++.++.+.+    +++..++|+.+..+.......  -..+........+.        ..+...+|+|++++
T Consensus       106 sK~~~E~~~~~~~~~~g----~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  181 (369)
T 3st7_A          106 SKLQGEQLLREYAEEYG----NTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIK  181 (369)
T ss_dssp             HHHHHHHHHHHHHHHHC----CCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhC----CCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHH
Confidence            99999999999988764    899999999998664432211  12222222222111        12456899999999


Q ss_pred             HhcCccCC
Q 024976          242 YLASDAAV  249 (259)
Q Consensus       242 ~l~s~~~~  249 (259)
                      .++.....
T Consensus       182 ~~l~~~~~  189 (369)
T 3st7_A          182 RAIEGTPT  189 (369)
T ss_dssp             HHHHTCCC
T ss_pred             HHHhCCcc
Confidence            99876443

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.69  E-value=4.5e-16  Score=128.56  Aligned_cols=180  Identities=12%  Similarity=-0.047  Sum_probs=122.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++|||+ |.||++++++|.++|++|++++|+.+..+....      ..+.++.+|++|.+            +.++|+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~d~   66 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGVTH   66 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTCCE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------cCCCCE
Confidence            68999998 999999999999999999999999876544332      35899999999832            457999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHh--cCCCCCCCCCCceEEEeccccccccC-------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK--GGRGQASSSSGGIIINISATLHYTAT-------  163 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~~~~~~g~iv~isS~~~~~~~-------  163 (259)
                      |||+|+.....     .  .              ..+.++..+.+  .+.        .++|++||...+...       
T Consensus        67 vi~~a~~~~~~-----~--~--------------~~~~l~~a~~~~~~~~--------~~~v~~Ss~~vyg~~~~~~~~E  117 (286)
T 3ius_A           67 LLISTAPDSGG-----D--P--------------VLAALGDQIAARAAQF--------RWVGYLSTTAVYGDHDGAWVDE  117 (286)
T ss_dssp             EEECCCCBTTB-----C--H--------------HHHHHHHHHHHTGGGC--------SEEEEEEEGGGGCCCTTCEECT
T ss_pred             EEECCCccccc-----c--H--------------HHHHHHHHHHhhcCCc--------eEEEEeecceecCCCCCCCcCC
Confidence            99999954321     0  1              11334444444  222        689999997654321       


Q ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC--CChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          164 ----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       164 ----~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                          .+...|+.+|.+.+.+.+.+       .|++++.++|+.+..+.....  +...... .+........+...+|++
T Consensus       118 ~~~~~p~~~Y~~sK~~~E~~~~~~-------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva  189 (286)
T 3ius_A          118 TTPLTPTAARGRWRVMAEQQWQAV-------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIR-RIIKPGQVFSRIHVEDIA  189 (286)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHS-------TTCCEEEEEECEEEBTTBSSSTTSSSSCCC-EEECTTCCBCEEEHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHhh-------cCCCEEEEeccceECCCchHHHHHhcCCcc-ccCCCCcccceEEHHHHH
Confidence                22457999999999888865       369999999999986542110  0000000 000001122356789999


Q ss_pred             HHHHHhcCccC
Q 024976          238 MAALYLASDAA  248 (259)
Q Consensus       238 ~~~~~l~s~~~  248 (259)
                      ++++.++....
T Consensus       190 ~a~~~~~~~~~  200 (286)
T 3ius_A          190 QVLAASMARPD  200 (286)
T ss_dssp             HHHHHHHHSCC
T ss_pred             HHHHHHHhCCC
Confidence            99999987644

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.68  E-value=6.4e-17  Score=135.91  Aligned_cols=185  Identities=13%  Similarity=0.093  Sum_probs=118.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-h----hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-T----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~----~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++||||+|+||++++++|+++|++|++++|+. .    ......+.+..  ..+.++.+|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc-----
Confidence            35799999999999999999999999999999986 1    12222223322  358899999999999888775     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccccccc----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLHYT----  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~----  161 (259)
                        .+|+|||+++...                   +.+...+++++    .+.+ .        ++||  .|..+..    
T Consensus        77 --~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v--------~~~v--~S~~g~~~~~~  121 (321)
T 3c1o_A           77 --QVDIVISALPFPM-------------------ISSQIHIINAI----KAAGNI--------KRFL--PSDFGCEEDRI  121 (321)
T ss_dssp             --TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCC--------CEEE--CSCCSSCGGGC
T ss_pred             --CCCEEEECCCccc-------------------hhhHHHHHHHH----HHhCCc--------cEEe--ccccccCcccc
Confidence              5999999999521                   33444444444    4433 2        5677  3444321    


Q ss_pred             -c-CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc---cC---CCChHHHHHHhhhhccCCCCCCH
Q 024976          162 -A-TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG---VS---KLAPEEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       162 -~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~  233 (259)
                       + .+....| .+|.+++.+.+.    .    |++++.|+||.+.....   ..   ..........+........+.++
T Consensus       122 ~~~~p~~~~y-~sK~~~e~~~~~----~----~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (321)
T 3c1o_A          122 KPLPPFESVL-EKKRIIRRAIEA----A----ALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYE  192 (321)
T ss_dssp             CCCHHHHHHH-HHHHHHHHHHHH----H----TCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECH
T ss_pred             ccCCCcchHH-HHHHHHHHHHHH----c----CCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeH
Confidence             1 1224579 999999888762    2    47888899998863210   00   00000000000011111236789


Q ss_pred             HHHHHHHHHhcCcc
Q 024976          234 WDIAMAALYLASDA  247 (259)
Q Consensus       234 ~dva~~~~~l~s~~  247 (259)
                      +|+|+++..++.+.
T Consensus       193 ~Dva~~~~~~l~~~  206 (321)
T 3c1o_A          193 EDIAKYTIKVACDP  206 (321)
T ss_dssp             HHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHhCc
Confidence            99999999998754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.67  E-value=7.1e-16  Score=128.95  Aligned_cols=187  Identities=15%  Similarity=0.108  Sum_probs=122.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-----hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-----~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++||||+|+||++++++|+++|++|++++|+..     +.+. .+.+.  ...+.++.+|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~d~~~l~~~~~-----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK--QLGAKLIEASLDDHQRLVDALK-----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH--hCCeEEEeCCCCCHHHHHHHHh-----
Confidence            367999999999999999999999999999999843     2222 22232  3458899999999999888765     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccccccc----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLHYT----  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~----  161 (259)
                        ++|+|||+++.....               .|+.+..++++++.    +.+ .        .+||+ | ..+..    
T Consensus        76 --~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa~----~~g~v--------~~~v~-S-~~g~~~~~~  124 (313)
T 1qyd_A           76 --QVDVVISALAGGVLS---------------HHILEQLKLVEAIK----EAGNI--------KRFLP-S-EFGMDPDIM  124 (313)
T ss_dssp             --TCSEEEECCCCSSSS---------------TTTTTHHHHHHHHH----HSCCC--------SEEEC-S-CCSSCTTSC
T ss_pred             --CCCEEEECCccccch---------------hhHHHHHHHHHHHH----hcCCC--------ceEEe-c-CCcCCcccc
Confidence              699999999964321               25666666666553    333 2        56774 3 33311    


Q ss_pred             --c-CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChH--------HHHHHhhhhccCCCC
Q 024976          162 --A-TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE--------EIRSKATDYMAAYKF  230 (259)
Q Consensus       162 --~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~  230 (259)
                        + .+....| .+|.+++.+.+        ..|++++.++||.+.+. +...+...        .....+........+
T Consensus       125 ~~~~~p~~~~y-~sK~~~e~~~~--------~~g~~~~ilrp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  194 (313)
T 1qyd_A          125 EHALQPGSITF-IDKRKVRRAIE--------AASIPYTYVSSNMFAGY-FAGSLAQLDGHMMPPRDKVLIYGDGNVKGIW  194 (313)
T ss_dssp             CCCCSSTTHHH-HHHHHHHHHHH--------HTTCCBCEEECCEEHHH-HTTTSSCTTCCSSCCSSEECCBTTSCSEEEE
T ss_pred             ccCCCCCcchH-HHHHHHHHHHH--------hcCCCeEEEEeceeccc-cccccccccccccCCCCeEEEeCCCCceEEE
Confidence              1 1335678 99999887765        23688899999988632 11111100        000000010111235


Q ss_pred             CCHHHHHHHHHHhcCcc
Q 024976          231 GEKWDIAMAALYLASDA  247 (259)
Q Consensus       231 ~~~~dva~~~~~l~s~~  247 (259)
                      .+++|+++++..++...
T Consensus       195 i~~~Dva~~~~~~l~~~  211 (313)
T 1qyd_A          195 VDEDDVGTYTIKSIDDP  211 (313)
T ss_dssp             ECHHHHHHHHHHHTTCG
T ss_pred             EEHHHHHHHHHHHHhCc
Confidence            78999999999998764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.67  E-value=1.5e-16  Score=133.50  Aligned_cols=183  Identities=17%  Similarity=0.210  Sum_probs=117.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++++||||+|+||++++++|+++|++|++++|+.+......+++..  ..+.++.+|++|.+++.++++       .+|+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~-------~~d~   82 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMK-------KVDV   82 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHc-------CCCE
Confidence            6899999999999999999999999999999987522222233332  348899999999999888775       5999


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEecccccccc------Ccc
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLHYTA------TWY  165 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~~------~~~  165 (259)
                      |||+++...                   +.+...++++    +++.+ .        .+||+ |+ .+...      .+.
T Consensus        83 vi~~a~~~~-------------------~~~~~~l~~a----a~~~g~v--------~~~v~-S~-~g~~~~~~~~~~p~  129 (318)
T 2r6j_A           83 VISALAFPQ-------------------ILDQFKILEA----IKVAGNI--------KRFLP-SD-FGVEEDRINALPPF  129 (318)
T ss_dssp             EEECCCGGG-------------------STTHHHHHHH----HHHHCCC--------CEEEC-SC-CSSCTTTCCCCHHH
T ss_pred             EEECCchhh-------------------hHHHHHHHHH----HHhcCCC--------CEEEe-ec-cccCcccccCCCCc
Confidence            999998521                   2333444444    44433 2        56774 43 33211      122


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----ChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      ...| .+|.+++.+.+.        .|++++.++||.+... +...+    ..........+......+.+++|+++++.
T Consensus       130 ~~~y-~sK~~~e~~~~~--------~~~~~~~lr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  199 (318)
T 2r6j_A          130 EALI-ERKRMIRRAIEE--------ANIPYTYVSANCFASY-FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTI  199 (318)
T ss_dssp             HHHH-HHHHHHHHHHHH--------TTCCBEEEECCEEHHH-HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred             chhH-HHHHHHHHHHHh--------cCCCeEEEEcceehhh-hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHH
Confidence            4568 999998877752        3588889999887521 11000    00000000001011123567999999999


Q ss_pred             HhcCcc
Q 024976          242 YLASDA  247 (259)
Q Consensus       242 ~l~s~~  247 (259)
                      .++...
T Consensus       200 ~~l~~~  205 (318)
T 2r6j_A          200 KVATDP  205 (318)
T ss_dssp             HHTTCG
T ss_pred             HHhcCc
Confidence            999754

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.64  E-value=2.7e-15  Score=127.98  Aligned_cols=197  Identities=14%  Similarity=0.025  Sum_probs=129.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcC-----CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHG-----AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G-----~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +|+++||||+|+||++++++|+++|     ++|++++|+.....       ....++.++.+|++|.+++.++++..   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~---   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL---   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence            5789999999999999999999999     99999999865422       12346889999999999888776532   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEE-------Eeccccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII-------NISATLH  159 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv-------~isS~~~  159 (259)
                       +++|+|||+||...         ++++..+++|+.++.++++++.+...  +.        .++|       ++||...
T Consensus        71 -~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~--------~~~v~~~g~~i~~Ss~~v  130 (364)
T 2v6g_A           71 -TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--NL--------KHISLQTGRKHYMGPFES  130 (364)
T ss_dssp             -TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--TC--------CEEEEECCTHHHHCCGGG
T ss_pred             -CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--cc--------ceEEeccCceEEEechhh
Confidence             24999999999642         23567889999999999998865311  11        4565       6888654


Q ss_pred             cccC--------------ccchhhHHHHHHHHHHHHHHHHHhcCCCC-eEEEEEecccccCCcccCCCC--hHH-HHHHh
Q 024976          160 YTAT--------------WYQIHVSAAKAAVDSITRSLALEWGTDYA-IRVNGIAPGPIKDTAGVSKLA--PEE-IRSKA  221 (259)
Q Consensus       160 ~~~~--------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~g-i~v~~i~pg~v~t~~~~~~~~--~~~-~~~~~  221 (259)
                      +...              +....|.    +.+.+++.++.    ..| +++..++|+.+..+.......  ... ....+
T Consensus       131 yg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~----~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~  202 (364)
T 2v6g_A          131 YGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEVE----KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAI  202 (364)
T ss_dssp             TTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHHT----TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHH
T ss_pred             ccccccCCCCCCccccCCccchhhH----HHHHHHHHHhh----cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHH
Confidence            3211              1123452    23444443322    345 999999999998765432111  011 12222


Q ss_pred             --hhhccC------------CCCCCHHHHHHHHHHhcCc
Q 024976          222 --TDYMAA------------YKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       222 --~~~~~~------------~~~~~~~dva~~~~~l~s~  246 (259)
                        ....+.            ....+.+|+|++++.++..
T Consensus       203 ~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~  241 (364)
T 2v6g_A          203 CKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVD  241 (364)
T ss_dssp             HHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHC
T ss_pred             HHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhC
Confidence              111111            1223348899999998854

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.64  E-value=5.3e-16  Score=129.43  Aligned_cols=184  Identities=16%  Similarity=0.100  Sum_probs=117.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhH-----HHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL-----RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~-----~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++||||+|+||++++++|+++|++|++++|+....     ....+.+.  ...+.++.+|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc-----
Confidence            36799999999999999999999999999999974321     11122332  3458899999999999888776     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccccccc----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLHYT----  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~----  161 (259)
                        ++|+|||+++...                   +.+...+++++    ++.+ .        .+||+ |+ .+..    
T Consensus        77 --~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v--------~~~v~-S~-~g~~~~~~  121 (308)
T 1qyc_A           77 --NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTV--------KRFFP-SE-FGNDVDNV  121 (308)
T ss_dssp             --TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCC--------SEEEC-SC-CSSCTTSC
T ss_pred             --CCCEEEECCcchh-------------------hhhHHHHHHHH----HhcCCC--------ceEee-cc-cccCcccc
Confidence              5999999998421                   33444454444    3333 2        56763 43 3311    


Q ss_pred             -c-CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh-------HHHHHHhhhhccCCCCCC
Q 024976          162 -A-TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-------EEIRSKATDYMAAYKFGE  232 (259)
Q Consensus       162 -~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~  232 (259)
                       + .+....| .+|.+++.+.+.        .|++++.++||.+.+. +...+..       ...............+.+
T Consensus       122 ~~~~p~~~~y-~sK~~~e~~~~~--------~~~~~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (308)
T 1qyc_A          122 HAVEPAKSVF-EVKAKVRRAIEA--------EGIPYTYVSSNCFAGY-FLRSLAQAGLTAPPRDKVVILGDGNARVVFVK  191 (308)
T ss_dssp             CCCTTHHHHH-HHHHHHHHHHHH--------HTCCBEEEECCEEHHH-HTTTTTCTTCSSCCSSEEEEETTSCCEEEEEC
T ss_pred             ccCCcchhHH-HHHHHHHHHHHh--------cCCCeEEEEeceeccc-cccccccccccCCCCCceEEecCCCceEEEec
Confidence             1 1224578 999998877753        2478888999987632 1111100       000000001111123567


Q ss_pred             HHHHHHHHHHhcCcc
Q 024976          233 KWDIAMAALYLASDA  247 (259)
Q Consensus       233 ~~dva~~~~~l~s~~  247 (259)
                      ++|+++++..++...
T Consensus       192 ~~Dva~~~~~~l~~~  206 (308)
T 1qyc_A          192 EEDIGTFTIKAVDDP  206 (308)
T ss_dssp             HHHHHHHHHTTSSCG
T ss_pred             HHHHHHHHHHHHhCc
Confidence            899999999999754

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.63  E-value=1.9e-15  Score=135.05  Aligned_cols=191  Identities=15%  Similarity=0.056  Sum_probs=128.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ++++|||||+|.||++++++|+++|++|++++|+....              ..+.+|+.+..         .+.+.++|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------~~v~~d~~~~~---------~~~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------GKRFWDPLNPA---------SDLLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------TCEECCTTSCC---------TTTTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------cceeecccchh---------HHhcCCCC
Confidence            57999999999999999999999999999999986642              12567776421         22345899


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------  163 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  163 (259)
                      +|||+||.....   ..+.+.....+++|+.++.++++++.   .+.+        ..+||++||...+.+.        
T Consensus       204 ~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~--------~~r~V~~SS~~vyg~~~~~~~~~E  269 (516)
T 3oh8_A          204 VLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQ--------CTTMISASAVGFYGHDRGDEILTE  269 (516)
T ss_dssp             EEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSS--------CCEEEEEEEGGGGCSEEEEEEECT
T ss_pred             EEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCC--------CCEEEEeCcceEecCCCCCCccCC
Confidence            999999964332   23456678899999999999999754   2222        2689999997655310        


Q ss_pred             ---ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhh--------ccCCCCCC
Q 024976          164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--------MAAYKFGE  232 (259)
Q Consensus       164 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~  232 (259)
                         .+...|+.+|...+.+.+.    +. ..|++++.++||.+.++..  .. -..+...+...        .....+..
T Consensus       270 ~~~~~~~~y~~~~~~~E~~~~~----~~-~~gi~~~ilRp~~v~Gp~~--~~-~~~~~~~~~~g~~~~~g~g~~~~~~i~  341 (516)
T 3oh8_A          270 ESESGDDFLAEVCRDWEHATAP----AS-DAGKRVAFIRTGVALSGRG--GM-LPLLKTLFSTGLGGKFGDGTSWFSWIA  341 (516)
T ss_dssp             TSCCCSSHHHHHHHHHHHTTHH----HH-HTTCEEEEEEECEEEBTTB--SH-HHHHHHTTC---CCCCTTSCCEECEEE
T ss_pred             CCCCCcChHHHHHHHHHHHHHH----HH-hCCCCEEEEEeeEEECCCC--Ch-HHHHHHHHHhCCCcccCCCCceEceEe
Confidence               1334578888776655432    23 4579999999999987542  11 11111111110        01123567


Q ss_pred             HHHHHHHHHHhcCcc
Q 024976          233 KWDIAMAALYLASDA  247 (259)
Q Consensus       233 ~~dva~~~~~l~s~~  247 (259)
                      .+|++++++.++...
T Consensus       342 v~Dva~ai~~~l~~~  356 (516)
T 3oh8_A          342 IDDLTDIYYRAIVDA  356 (516)
T ss_dssp             HHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHhCc
Confidence            899999999998653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.48  E-value=1.3e-14  Score=120.20  Aligned_cols=110  Identities=16%  Similarity=0.271  Sum_probs=85.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++|+++||||+||||++++..|+++|++|++++|+.++.+++.+++... .++.++.+|++++++++++++      
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK------  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT------
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH------
Confidence            3478999999999999999999999999999999999988888887777542 236678899999998877664      


Q ss_pred             CCccEEEECCCCCC-CCCCCCCCH-HHHHHHHhccchhHH
Q 024976           88 GKLDILVNAAAGNF-LVPAEDLSP-NGFRTVIEIDSVGTF  125 (259)
Q Consensus        88 g~id~li~~ag~~~-~~~~~~~~~-~~~~~~~~~n~~~~~  125 (259)
                       .+|+||||+|... ..++.+.+. ++|...+++|+.+++
T Consensus       188 -~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 -GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             -TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             -hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence             4899999998532 222222222 455668888888765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.41  E-value=2.7e-12  Score=106.54  Aligned_cols=188  Identities=14%  Similarity=0.067  Sum_probs=115.4

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      ++|||||+|.||++++++|.++|++|+++.|++..            ..   +..|     .+      ..+.+..+|.+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~---~~~~-----~~------~~~~l~~~d~v   55 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GR---ITWD-----EL------AASGLPSCDAA   55 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TE---EEHH-----HH------HHHCCCSCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Ce---eecc-----hh------hHhhccCCCEE
Confidence            69999999999999999999999999999987542            01   1111     11      12234689999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----------
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------  163 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  163 (259)
                      ||.||..........+.+.....++.|+.++..+.+++...-.+          ...+|+.||...+...          
T Consensus        56 ihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~----------~~~~i~~Ss~~vyg~~~~~~~~E~~p  125 (298)
T 4b4o_A           56 VNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQP----------PKAWVLVTGVAYYQPSLTAEYDEDSP  125 (298)
T ss_dssp             EECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSC----------CSEEEEEEEGGGSCCCSSCCBCTTCC
T ss_pred             EEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCC----------ceEEEEEeeeeeecCCCCCcccccCC
Confidence            99998543333333456666788889988888777666432111          1457777776654321          


Q ss_pred             -ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHh--hhhcc------CCCCCCHH
Q 024976          164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA--TDYMA------AYKFGEKW  234 (259)
Q Consensus       164 -~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~  234 (259)
                       .+...|+..|...+.     ..... ..++++..+.|+.+..+...  .. .......  ....+      ...+...+
T Consensus       126 ~~~~~~~~~~~~~~e~-----~~~~~-~~~~~~~~~r~~~v~g~~~~--~~-~~~~~~~~~~~~~~~g~g~~~~~~ihv~  196 (298)
T 4b4o_A          126 GGDFDFFSNLVTKWEA-----AARLP-GDSTRQVVVRSGVVLGRGGG--AM-GHMLLPFRLGLGGPIGSGHQFFPWIHIG  196 (298)
T ss_dssp             CSCSSHHHHHHHHHHH-----HHCCS-SSSSEEEEEEECEEECTTSH--HH-HHHHHHHHTTCCCCBTTSCSBCCEEEHH
T ss_pred             ccccchhHHHHHHHHH-----HHHhh-ccCCceeeeeeeeEEcCCCC--ch-hHHHHHHhcCCcceecccCceeecCcHH
Confidence             222334444433322     12233 67899999999999865321  00 1111111  11111      12245689


Q ss_pred             HHHHHHHHhcCc
Q 024976          235 DIAMAALYLASD  246 (259)
Q Consensus       235 dva~~~~~l~s~  246 (259)
                      |+++++.+++..
T Consensus       197 Dva~a~~~~~~~  208 (298)
T 4b4o_A          197 DLAGILTHALEA  208 (298)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhC
Confidence            999999998854

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.26  E-value=8.2e-12  Score=105.13  Aligned_cols=151  Identities=11%  Similarity=0.113  Sum_probs=101.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC-------eEEEEeCCh--hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      .++++||||+|.||.+++..|+++|.       +|+++|++.  +..+....++......  ++ .|+.+..+..+.+  
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~--~~-~di~~~~~~~~a~--   78 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP--LL-AGLEATDDPKVAF--   78 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT--TE-EEEEEESCHHHHT--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccc--cc-CCeEeccChHHHh--
Confidence            35799999999999999999999996       799999874  2233333344332211  22 4555443333333  


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc---
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH---  159 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~---  159 (259)
                           ...|+|||.||.....   ..+   ....++.|+.++..+++++..+-  ..        .++++++|+...   
T Consensus        79 -----~~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~--------~~~vvv~snp~~~~~  137 (327)
T 1y7t_A           79 -----KDADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KK--------DVKVLVVGNPANTNA  137 (327)
T ss_dssp             -----TTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CT--------TCEEEECSSSHHHHH
T ss_pred             -----CCCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CC--------CeEEEEeCCchhhhH
Confidence                 3689999999964321   122   34678999999999988887641  01        156888877541   


Q ss_pred             -----cc-cCccchhhHHHHHHHHHHHHHHHHHhc
Q 024976          160 -----YT-ATWYQIHVSAAKAAVDSITRSLALEWG  188 (259)
Q Consensus       160 -----~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~  188 (259)
                           .. +.++...|+.+|...+.+.+.++..++
T Consensus       138 ~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          138 LIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             HHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence                 11 234455699999999999888888764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.21  E-value=4.5e-11  Score=94.34  Aligned_cols=114  Identities=15%  Similarity=0.164  Sum_probs=75.0

Q ss_pred             CCCCcEEEEeCC----------------ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC
Q 024976            9 ILKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK   72 (259)
Q Consensus         9 ~l~~k~~lItGa----------------~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   72 (259)
                      +|+||+++||||                +||||.++|+.|+++|++|++++++.. ++        ....+  -.+|+++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~~g~--~~~dv~~   73 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TPPFV--KRVDVMT   73 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CCTTE--EEEECCS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cCCCC--eEEccCc
Confidence            588999999999                689999999999999999999987642 11        01122  3467777


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHH--HhccchhHHHHHHHHHHHHHh
Q 024976           73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV--IEIDSVGTFIMCHEALKYLKK  137 (259)
Q Consensus        73 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~~~~  137 (259)
                      .   +++++.+.+.++++|++|||||+....++. ...+.+.+.  -+.++.-.+....-+++.+.+
T Consensus        74 ~---~~~~~~v~~~~~~~Dili~~Aav~d~~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~  136 (226)
T 1u7z_A           74 A---LEMEAAVNASVQQQNIFIGCAAVADYRAAT-VAPEKIKKQATQGDELTIKMVKNPDIVAGVAA  136 (226)
T ss_dssp             H---HHHHHHHHHHGGGCSEEEECCBCCSEEESS-CCSSCC-------CEEEEEEEECCCHHHHHHH
T ss_pred             H---HHHHHHHHHhcCCCCEEEECCcccCCCCcc-CChHHhccccccCCceEEEEeecHHHHHHHHh
Confidence            4   446677778889999999999986544442 233333331  122333344444555666654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.05  E-value=3.8e-10  Score=89.25  Aligned_cols=84  Identities=12%  Similarity=0.165  Sum_probs=62.2

Q ss_pred             CCcEEEEeCC----------------ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHH
Q 024976           11 KGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE   74 (259)
Q Consensus        11 ~~k~~lItGa----------------~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   74 (259)
                      +||++|||||                +|++|.++|+.|+++|++|++++|+... ..      .....+..+  |+.   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~------~~~~~~~~~--~v~---   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP------EPHPNLSIR--EIT---   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC------CCCTTEEEE--ECC---
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc------cCCCCeEEE--EHh---
Confidence            5899999999                7779999999999999999999987531 10      001123333  333   


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCC
Q 024976           75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAE  106 (259)
Q Consensus        75 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~  106 (259)
                      +++++++.+.+.++++|++|+||+.....+..
T Consensus        70 s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~  101 (232)
T 2gk4_A           70 NTKDLLIEMQERVQDYQVLIHSMAVSDYTPVY  101 (232)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECSBCCSEEEEE
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCccccccchh
Confidence            56777777788889999999999986655543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.02  E-value=2.3e-09  Score=75.96  Aligned_cols=74  Identities=14%  Similarity=0.153  Sum_probs=62.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|+.++.+...      ...+.++.+|+++.+++.++++       .
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~   69 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG-------G   69 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc-------C
Confidence            3579999999 999999999999999 88999999987665543      2347788999999988777653       7


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|++++
T Consensus        70 ~d~vi~~~~   78 (118)
T 3ic5_A           70 FDAVISAAP   78 (118)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999996

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.93  E-value=1e-09  Score=82.32  Aligned_cols=77  Identities=18%  Similarity=0.124  Sum_probs=64.6

Q ss_pred             cchHHHHHHHHHHcCCeEEEEeCChhhHH---HHHHHHHhcCCCeEEEEcCCCCH--HHHHHHHHHHHHHcCCccEEEEC
Q 024976           22 SGIGFEISLQLGKHGAAIAIMGRRKTVLR---SAVAALHSLGIPAIGLEGDVRKR--EDAVRVVESTINHFGKLDILVNA   96 (259)
Q Consensus        22 ~giG~~~a~~l~~~G~~vv~~~r~~~~~~---~~~~~~~~~~~~v~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~li~~   96 (259)
                      +-++.+.++.|++.|++|++..|+.....   ...+.+...|.++..+.+|++++  ++++++++.+.+.+|+ |+||||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            45889999999999999999888654432   23555666677788899999999  9999999999998999 999999


Q ss_pred             CCC
Q 024976           97 AAG   99 (259)
Q Consensus        97 ag~   99 (259)
                      +|+
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            995

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.87  E-value=2e-08  Score=86.84  Aligned_cols=81  Identities=16%  Similarity=0.167  Sum_probs=70.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcC---CeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHG---AAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G---~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+|| |+||+++++.|++.|   .+|++++|+.++++.+.+++... +.++..+.+|++|.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47899999 899999999999998   38999999999999888887653 346889999999999999998865     


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      ++|+||||++.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            69999999984

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.81  E-value=2.3e-11  Score=106.01  Aligned_cols=45  Identities=24%  Similarity=0.347  Sum_probs=39.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV   53 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~   53 (259)
                      .++.||+++|||++ +||+++++.|++.|++|++++++........
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            35899999999988 9999999999999999999999877655443

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.76  E-value=4e-09  Score=94.14  Aligned_cols=100  Identities=18%  Similarity=0.206  Sum_probs=68.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++|+++|||| ||+|++++.+|++.|++|++++|+.++++++.+++.   .++..+ .|+.      ++      ..+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~~~-~dl~------~~------~~~  423 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKALSL-TDLD------NY------HPE  423 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CEET-TTTT------TC--------C
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---CceeeH-HHhh------hc------ccc
Confidence            478899999999 599999999999999999999999888877776652   222211 1220      00      113


Q ss_pred             CccEEEECCCCCCC-----CCCCCCCHHHHHHHHhccchhHH
Q 024976           89 KLDILVNAAAGNFL-----VPAEDLSPNGFRTVIEIDSVGTF  125 (259)
Q Consensus        89 ~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~  125 (259)
                      .+|++|||+|....     .++.+.+.++|...+++|+.+..
T Consensus       424 ~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          424 DGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             CSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             CceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            58999999996432     35566677788899999998753

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.72  E-value=3.4e-08  Score=76.71  Aligned_cols=80  Identities=23%  Similarity=0.224  Sum_probs=57.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+||||+++++.+...|++|++++++.++.+..    .+.+...   .+|.++.+..+.+.+...  .++
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~~--~~~  107 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEY---VGDSRSVDFADEILELTD--GYG  107 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSE---EEETTCSTHHHHHHHHTT--TCC
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE---EeeCCcHHHHHHHHHHhC--CCC
Confidence            3689999999999999999999999999999999987665443    2234322   246766544444333221  136


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|+|+|
T Consensus       108 ~D~vi~~~g  116 (198)
T 1pqw_A          108 VDVVLNSLA  116 (198)
T ss_dssp             EEEEEECCC
T ss_pred             CeEEEECCc
Confidence            999999998

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.68  E-value=4e-08  Score=82.65  Aligned_cols=80  Identities=8%  Similarity=0.115  Sum_probs=60.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+||||+.+++.+...|++|++++++.++++.. +++   +..   ..+|.++.+++.+.+.++..  ++
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~~--~~  214 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD---AAFNYKTVNSLEEALKKASP--DG  214 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS---EEEETTSCSCHHHHHHHHCT--TC
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc---EEEecCCHHHHHHHHHHHhC--CC
Confidence            3689999999999999999999999999999999987766554 333   332   23477764445555544432  57


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|+|+|
T Consensus       215 ~d~vi~~~g  223 (333)
T 1v3u_A          215 YDCYFDNVG  223 (333)
T ss_dssp             EEEEEESSC
T ss_pred             CeEEEECCC
Confidence            999999999

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.68  E-value=4e-08  Score=85.93  Aligned_cols=77  Identities=16%  Similarity=0.111  Sum_probs=62.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++|+++|+| +|++|+++++.|++.|++|++++|+.++.+.+.+.+    ..+..+.+|+++.+++.++++       ++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------~~   69 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KH   69 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------CC
Confidence            468999997 799999999999999999999999877655443322    236788999999988877663       69


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |+|||+++.
T Consensus        70 DvVIn~a~~   78 (450)
T 1ff9_A           70 DLVISLIPY   78 (450)
T ss_dssp             SEEEECCC-
T ss_pred             cEEEECCcc
Confidence            999999985

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.68  E-value=6.5e-09  Score=85.74  Aligned_cols=81  Identities=20%  Similarity=0.231  Sum_probs=60.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++|+|++ |+|++++..|++.| +|++++|+.++++++.+++...+.....+.+|+++.          .+.++
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence            5789999999997 99999999999999 999999998888888777653210000112344431          23457


Q ss_pred             CccEEEECCCCCC
Q 024976           89 KLDILVNAAAGNF  101 (259)
Q Consensus        89 ~id~li~~ag~~~  101 (259)
                      ++|+||||+|...
T Consensus       193 ~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 GVDIIINATPIGM  205 (287)
T ss_dssp             TCCEEEECSCTTC
T ss_pred             CCCEEEECCCCCC
Confidence            8999999999643

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.67  E-value=3.1e-08  Score=84.55  Aligned_cols=79  Identities=15%  Similarity=0.156  Sum_probs=62.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+.+++++|+|+ |+||+.+++.+...|++|++++|+.++++...+.+   +..   +.+|.++.+++.+.+.      
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~------  228 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ------  228 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH------
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh------
Confidence            3578999999999 99999999999999999999999987766554433   332   4567778877776654      


Q ss_pred             CCccEEEECCCCC
Q 024976           88 GKLDILVNAAAGN  100 (259)
Q Consensus        88 g~id~li~~ag~~  100 (259)
                       ..|++|++++..
T Consensus       229 -~~DvVi~~~g~~  240 (369)
T 2eez_A          229 -HADLLIGAVLVP  240 (369)
T ss_dssp             -HCSEEEECCC--
T ss_pred             -CCCEEEECCCCC
Confidence             589999999953

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.60  E-value=1.6e-07  Score=82.47  Aligned_cols=83  Identities=13%  Similarity=0.113  Sum_probs=63.2

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +....+++++++|+|+ |++|++++..|++. |++|++++|+.++.+.+.+.     ..+..+.+|+.+.+++.++++  
T Consensus        16 ~~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~--   87 (467)
T 2axq_A           16 HIEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA--   87 (467)
T ss_dssp             -------CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH--
T ss_pred             ccccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc--
Confidence            3445688899999997 99999999999998 77899999998776665443     135677899999988877664  


Q ss_pred             HHHcCCccEEEECCCCC
Q 024976           84 INHFGKLDILVNAAAGN  100 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~  100 (259)
                           .+|+|||+++..
T Consensus        88 -----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -----DNDVVISLIPYT   99 (467)
T ss_dssp             -----TSSEEEECSCGG
T ss_pred             -----CCCEEEECCchh
Confidence                 699999999853

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.58  E-value=5.7e-07  Score=74.73  Aligned_cols=83  Identities=20%  Similarity=0.235  Sum_probs=64.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC---hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++..... ..+...++.+.+++.+.+.  
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhc--
Confidence            4578999999998 6999999999999999 79999999   8888888888765322 3333456777666555443  


Q ss_pred             HHHcCCccEEEECCCC
Q 024976           84 INHFGKLDILVNAAAG   99 (259)
Q Consensus        84 ~~~~g~id~li~~ag~   99 (259)
                           ..|+|||+...
T Consensus       226 -----~aDiIINaTp~  236 (315)
T 3tnl_A          226 -----ESVIFTNATGV  236 (315)
T ss_dssp             -----TCSEEEECSST
T ss_pred             -----CCCEEEECccC
Confidence                 68999999864

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.54  E-value=3.7e-07  Score=66.82  Aligned_cols=76  Identities=8%  Similarity=0.046  Sum_probs=59.7

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      +..++++|+|+ |.+|+++++.|.++|++|++++++++..+...+    .  .+.++.+|.++++.++++      ...+
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~------~~~~   70 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--GFDAVIADPTDESFYRSL------DLEG   70 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEECCTTCHHHHHHS------CCTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--CCcEEECCCCCHHHHHhC------Cccc
Confidence            34578999998 679999999999999999999999876655443    2  367889999999877654      1246


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      .|++|.+.+
T Consensus        71 ~d~vi~~~~   79 (141)
T 3llv_A           71 VSAVLITGS   79 (141)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEecC
Confidence            899998877

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.50  E-value=4.1e-07  Score=74.29  Aligned_cols=76  Identities=20%  Similarity=0.264  Sum_probs=58.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++...+ .+  ...|+   +++       .+  +
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~--~~~~~---~~~-------~~--~  179 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SI--QALSM---DEL-------EG--H  179 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SE--EECCS---GGG-------TT--C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Ce--eEecH---HHh-------cc--C
Confidence            468999999998 699999999999999999999999988888877764322 22  12333   111       11  5


Q ss_pred             CccEEEECCCCC
Q 024976           89 KLDILVNAAAGN  100 (259)
Q Consensus        89 ~id~li~~ag~~  100 (259)
                      ++|+||++++..
T Consensus       180 ~~DivVn~t~~~  191 (271)
T 1nyt_A          180 EFDLIINATSSG  191 (271)
T ss_dssp             CCSEEEECCSCG
T ss_pred             CCCEEEECCCCC
Confidence            899999999964

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.50  E-value=3.6e-07  Score=77.26  Aligned_cols=80  Identities=16%  Similarity=0.169  Sum_probs=60.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+|++||||+.+++.+...|++|++++++.++++.. ++   .+..   ..+|.++.+++.+.+.++..  ++
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~---~g~~---~~~d~~~~~~~~~~~~~~~~--~~  238 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RS---IGGE---VFIDFTKEKDIVGAVLKATD--GG  238 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HH---TTCC---EEEETTTCSCHHHHHHHHHT--SC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HH---cCCc---eEEecCccHhHHHHHHHHhC--CC
Confidence            3589999999999999999999999999999999987766433 22   2332   22477755556666655543  27


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|+++|
T Consensus       239 ~D~vi~~~g  247 (347)
T 2hcy_A          239 AHGVINVSV  247 (347)
T ss_dssp             EEEEEECSS
T ss_pred             CCEEEECCC
Confidence            999999998

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.48  E-value=1.8e-07  Score=68.39  Aligned_cols=78  Identities=12%  Similarity=0.172  Sum_probs=57.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++++++|+|+ |++|+.+++.|.+.|++|++++++.+..+..    ...+  ...+.+|.++.+.+.++      ..+
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~~--~~~~~~d~~~~~~l~~~------~~~   69 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA--THAVIANATEENELLSL------GIR   69 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTTC--SEEEECCTTCHHHHHTT------TGG
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhC--CEEEEeCCCCHHHHHhc------CCC
Confidence            356788999998 9999999999999999999999987654332    2222  45678899987665443      134


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      +.|++|++.+.
T Consensus        70 ~~d~vi~~~~~   80 (144)
T 2hmt_A           70 NFEYVIVAIGA   80 (144)
T ss_dssp             GCSEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.43  E-value=2.8e-07  Score=77.82  Aligned_cols=81  Identities=10%  Similarity=0.160  Sum_probs=59.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+|+||+.+++.+...|++|++++++.++++.+.++   .+...   .+|.++.+++.+.+.++..  ++
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~~d~~~~~~~~~~~~~~~~--~~  225 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFDD---AFNYKEESDLTAALKRCFP--NG  225 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCSE---EEETTSCSCSHHHHHHHCT--TC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCce---EEecCCHHHHHHHHHHHhC--CC
Confidence            3689999999999999999999999999999999988766554433   24332   2366554344444444322  47


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|+|+|
T Consensus       226 ~d~vi~~~g  234 (345)
T 2j3h_A          226 IDIYFENVG  234 (345)
T ss_dssp             EEEEEESSC
T ss_pred             CcEEEECCC
Confidence            999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.41  E-value=6.6e-07  Score=75.21  Aligned_cols=81  Identities=17%  Similarity=0.122  Sum_probs=58.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+||||+++++.+...|++|++++++.++++.+.+ +   +...   .+|.++.+..+++.+...  ..+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g~~~---~~d~~~~~~~~~i~~~~~--~~~  214 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---GCHH---TINYSTQDFAEVVREITG--GKG  214 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHHT--TCC
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCHHHHHHHHHHhC--CCC
Confidence            358999999999999999999999999999999999876655432 3   3332   236665444444333221  136


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|++|+|+|.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1wly_A          215 VDVVYDSIGK  224 (333)
T ss_dssp             EEEEEECSCT
T ss_pred             CeEEEECCcH
Confidence            9999999993

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.41  E-value=5.2e-07  Score=75.62  Aligned_cols=80  Identities=16%  Similarity=0.092  Sum_probs=58.0

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+||||+.+++.+...|++|++++++.++++...+ +   +...   .+|.++.+..+++.+...  ..+
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~~--~~~  209 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEITG--GKK  209 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHTT--TCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHhC--CCC
Confidence            358999999999999999999999999999999998776655433 3   3322   246665544444333221  136


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|+|+|
T Consensus       210 ~D~vi~~~g  218 (327)
T 1qor_A          210 VRVVYDSVG  218 (327)
T ss_dssp             EEEEEECSC
T ss_pred             ceEEEECCc
Confidence            999999999

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.39  E-value=1.5e-06  Score=72.94  Aligned_cols=151  Identities=8%  Similarity=0.115  Sum_probs=94.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC-------eEEEEeCC----hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRR----KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~-------~vv~~~r~----~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      .++++||||+|.+|..++..|+..|.       +|+++|++    .++++....++......+.   .|+....+..+. 
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~a-   80 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTA-   80 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHH-
Confidence            46899999999999999999999885       79999998    5556555555654221121   233322222222 


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-  159 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-  159 (259)
                            +...|+||+.||....   ...+.   ...+..|+.....+++.+..+-  ..        .++||++|.... 
T Consensus        81 ------l~~aD~Vi~~ag~~~~---~g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p--------~a~ii~~SNPv~~  138 (329)
T 1b8p_A           81 ------FKDADVALLVGARPRG---PGMER---KDLLEANAQIFTVQGKAIDAVA--SR--------NIKVLVVGNPANT  138 (329)
T ss_dssp             ------TTTCSEEEECCCCCCC---TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CT--------TCEEEECSSSHHH
T ss_pred             ------hCCCCEEEEeCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHhc--CC--------CeEEEEccCchHH
Confidence                  3468999999996432   12233   3456778777777766666541  01        267998887552 


Q ss_pred             -------cc-cCccchhhHHHHHHHHHHHHHHHHHhc
Q 024976          160 -------YT-ATWYQIHVSAAKAAVDSITRSLALEWG  188 (259)
Q Consensus       160 -------~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~  188 (259)
                             .. +++....|+.++.--..+.+.++..++
T Consensus       139 ~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          139 NAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence                   12 333434577776555566667777765

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.36  E-value=2e-06  Score=70.44  Aligned_cols=80  Identities=18%  Similarity=0.173  Sum_probs=61.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++......+.+...+..+.   .+.+.      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHh------
Confidence            578999999998 7999999999999999 699999999999988888865433333334444333   22222      


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                       ..|+|||+...
T Consensus       194 -~~DiVInaTp~  204 (283)
T 3jyo_A          194 -AADGVVNATPM  204 (283)
T ss_dssp             -HSSEEEECSST
T ss_pred             -cCCEEEECCCC
Confidence             47999999864

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.34  E-value=1e-06  Score=74.69  Aligned_cols=80  Identities=18%  Similarity=0.199  Sum_probs=57.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+||||+.+++.+...|++|++++++.++++.+ +++   +..   ..+|.++.+..+++.+...  .++
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~  231 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAA---AGFNYKKEDFSEATLKFTK--GAG  231 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCS---EEEETTTSCHHHHHHHHTT--TSC
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc---EEEecCChHHHHHHHHHhc--CCC
Confidence            3589999999999999999999999999999999988776654 333   332   2245555443333322111  136


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|+|+|
T Consensus       232 ~d~vi~~~G  240 (354)
T 2j8z_A          232 VNLILDCIG  240 (354)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999999

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.33  E-value=6.2e-07  Score=76.10  Aligned_cols=79  Identities=13%  Similarity=0.132  Sum_probs=56.3

Q ss_pred             CC--cEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           11 KG--KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        11 ~~--k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .|  ++++|+||+||||+.+++.+...|+ +|++++++.++++.+.+++   +..   ..+|.++.+..+. +.+...  
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~---~~~d~~~~~~~~~-~~~~~~--  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD---AAINYKKDNVAEQ-LRESCP--  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS---EEEETTTSCHHHH-HHHHCT--
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc---eEEecCchHHHHH-HHHhcC--
Confidence            46  8999999999999999999999999 9999999877665544323   332   2346665332222 222211  


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      +++|++|+|+|
T Consensus       229 ~~~d~vi~~~G  239 (357)
T 2zb4_A          229 AGVDVYFDNVG  239 (357)
T ss_dssp             TCEEEEEESCC
T ss_pred             CCCCEEEECCC
Confidence            26999999999

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.32  E-value=8.9e-07  Score=74.46  Aligned_cols=80  Identities=14%  Similarity=0.203  Sum_probs=57.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+|++|+||..+++.+...|++|++++++.++++.+.+++   +...   ..|.++.+..+.+.+ ..  .++
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~-~~--~~~  218 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDG---AIDYKNEDLAAGLKR-EC--PKG  218 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSE---EEETTTSCHHHHHHH-HC--TTC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCE---EEECCCHHHHHHHHH-hc--CCC
Confidence            35899999999999999999999999999999999887766553433   4322   235555333333222 21  247


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|+|+|
T Consensus       219 ~d~vi~~~g  227 (336)
T 4b7c_A          219 IDVFFDNVG  227 (336)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999999

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.31  E-value=1.7e-06  Score=73.23  Aligned_cols=80  Identities=15%  Similarity=0.148  Sum_probs=56.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+||||..+++.+...|++|+++++++++++.. +   +.+...   .+|.++.+..+++.+.. . ..+
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~---~~ga~~---~~d~~~~~~~~~~~~~~-~-~~~  239 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-L---QNGAHE---VFNHREVNYIDKIKKYV-G-EKG  239 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCSE---EEETTSTTHHHHHHHHH-C-TTC
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-H---HcCCCE---EEeCCCchHHHHHHHHc-C-CCC
Confidence            3588999999999999999999999999999999988766532 2   234332   24666544333332221 1 127


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|+|+|
T Consensus       240 ~D~vi~~~G  248 (351)
T 1yb5_A          240 IDIIIEMLA  248 (351)
T ss_dssp             EEEEEESCH
T ss_pred             cEEEEECCC
Confidence            999999999

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.26  E-value=8.7e-06  Score=66.38  Aligned_cols=76  Identities=14%  Similarity=0.215  Sum_probs=57.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+ .+..  +|+   +++.       +  +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~-------~--~  179 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSIP-------L--Q  179 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCC-------C--S
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHhc-------c--C
Confidence            578999999998 799999999999999999999999988888888775432 2322  232   1110       1  4


Q ss_pred             CccEEEECCCCC
Q 024976           89 KLDILVNAAAGN  100 (259)
Q Consensus        89 ~id~li~~ag~~  100 (259)
                      ..|+||++.+..
T Consensus       180 ~~DivIn~t~~~  191 (272)
T 1p77_A          180 TYDLVINATSAG  191 (272)
T ss_dssp             CCSEEEECCCC-
T ss_pred             CCCEEEECCCCC
Confidence            799999999964

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.23  E-value=9.9e-06  Score=67.16  Aligned_cols=84  Identities=18%  Similarity=0.199  Sum_probs=61.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC---hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++.+++.+++..... ......+..+.+...+.+.  
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~-~~v~~~~~~~l~~~~~~l~--  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD-CVVTVTDLADQHAFTEALA--  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC-cceEEechHhhhhhHhhcc--
Confidence            3578999999997 7999999999999999 79999999   7778888887764321 2223345555433333222  


Q ss_pred             HHHcCCccEEEECCCCC
Q 024976           84 INHFGKLDILVNAAAGN  100 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~  100 (259)
                           ..|+|||+....
T Consensus       220 -----~~DiIINaTp~G  231 (312)
T 3t4e_A          220 -----SADILTNGTKVG  231 (312)
T ss_dssp             -----HCSEEEECSSTT
T ss_pred             -----CceEEEECCcCC
Confidence                 479999997753

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.22  E-value=4.5e-06  Score=70.49  Aligned_cols=80  Identities=16%  Similarity=0.237  Sum_probs=56.3

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .|++++|+|++|+||+.++..+... |++|+++++++++++.+ +++   +....   +|.++.+..+++ .++... ++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~~~-~~~~~~-~~  240 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA---GADYV---INASMQDPLAEI-RRITES-KG  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH---TCSEE---EETTTSCHHHHH-HHHTTT-SC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCEE---ecCCCccHHHHH-HHHhcC-CC
Confidence            6789999999999999999999999 99999999988776554 333   33322   355543332222 222111 58


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|++|+|+|.
T Consensus       241 ~d~vi~~~g~  250 (347)
T 1jvb_A          241 VDAVIDLNNS  250 (347)
T ss_dssp             EEEEEESCCC
T ss_pred             ceEEEECCCC
Confidence            9999999993

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.21  E-value=4.3e-06  Score=71.17  Aligned_cols=76  Identities=17%  Similarity=0.284  Sum_probs=53.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh---hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .++|++++|+|+ |+||..++..+...|++|++++++.   ++++. .+++   +.  ..+  | .+  ++.+.+.+ ..
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~---ga--~~v--~-~~--~~~~~~~~-~~  244 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEET---KT--NYY--N-SS--NGYDKLKD-SV  244 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHH---TC--EEE--E-CT--TCSHHHHH-HH
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHh---CC--cee--c-hH--HHHHHHHH-hC
Confidence            355999999999 9999999999999999999999987   65533 2333   32  222  5 44  22222222 22


Q ss_pred             HcCCccEEEECCCC
Q 024976           86 HFGKLDILVNAAAG   99 (259)
Q Consensus        86 ~~g~id~li~~ag~   99 (259)
                        +++|++|+++|.
T Consensus       245 --~~~d~vid~~g~  256 (366)
T 2cdc_A          245 --GKFDVIIDATGA  256 (366)
T ss_dssp             --CCEEEEEECCCC
T ss_pred             --CCCCEEEECCCC
Confidence              689999999994

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.15  E-value=2.1e-05  Score=58.18  Aligned_cols=78  Identities=14%  Similarity=0.208  Sum_probs=59.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .++.++|.|+ |.+|+.+++.|.+.|++|++++++. +..+...+..   ...+.++.+|.++++.++++      ...+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a------~i~~   71 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKA------GIDR   71 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHH------TTTT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHc------Chhh
Confidence            3567888886 9999999999999999999999974 4444443332   22478899999998876554      1246


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (153)
T 1id1_A           72 CRAILALSD   80 (153)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEEecC
Confidence            899999887

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.15  E-value=5.7e-06  Score=70.06  Aligned_cols=80  Identities=20%  Similarity=0.218  Sum_probs=57.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+|+||..++..+...|++|++++++.++++.+.+ +   +....   .|.++.+..+.+.+ ..  .++
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~~---~~~~~~~~~~~~~~-~~--~~g  235 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---GAKRG---INYRSEDFAAVIKA-ET--GQG  235 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHH-HH--SSC
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEE---EeCCchHHHHHHHH-Hh--CCC
Confidence            368899999999999999999999999999999999887655433 3   33322   34444333333322 22  347


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|++|+|+|.
T Consensus       236 ~Dvvid~~g~  245 (353)
T 4dup_A          236 VDIILDMIGA  245 (353)
T ss_dssp             EEEEEESCCG
T ss_pred             ceEEEECCCH
Confidence            9999999993

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.15  E-value=7.6e-06  Score=71.51  Aligned_cols=85  Identities=14%  Similarity=0.181  Sum_probs=61.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEE--cCCC---------CHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE--GDVR---------KREDAVR   78 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~--~Dl~---------~~~~~~~   78 (259)
                      -.|++++|+||+|+||..++..+...|++|++++++.++++.+ +   +.+....+..  .|+.         +.++.+.
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~---~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~  294 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-R---ALGCDLVINRAELGITDDIADDPRRVVETGRK  294 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---hcCCCEEEecccccccccccccccccchhhhH
Confidence            4689999999999999999999999999999998887766544 2   3344333222  2221         2345555


Q ss_pred             HHHHHHHHcC-CccEEEECCC
Q 024976           79 VVESTINHFG-KLDILVNAAA   98 (259)
Q Consensus        79 ~~~~~~~~~g-~id~li~~ag   98 (259)
                      +.+++.+..+ ++|++|+++|
T Consensus       295 ~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          295 LAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHHSSCCSEEEECSC
T ss_pred             HHHHHHHHhCCCceEEEECCC
Confidence            6666666555 6999999999

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.14  E-value=5e-05  Score=63.52  Aligned_cols=106  Identities=12%  Similarity=0.219  Sum_probs=67.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ..+++||||+|.+|..++..|+++|  .+|++++++++  +....++........+ .. +++..+..+.+       ..
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al-------~g   76 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVV-RG-FLGQQQLEAAL-------TG   76 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEE-EE-EESHHHHHHHH-------TT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceE-EE-EeCCCCHHHHc-------CC
Confidence            3589999999999999999999998  68999998765  3333344432221111 11 22233333333       37


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHH
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY  134 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  134 (259)
                      .|++|+++|.....   ..+..   ..+..|+.....+.+.+..+
T Consensus        77 aDvVi~~ag~~~~~---g~~r~---dl~~~N~~~~~~i~~~i~~~  115 (326)
T 1smk_A           77 MDLIIVPAGVPRKP---GMTRD---DLFKINAGIVKTLCEGIAKC  115 (326)
T ss_dssp             CSEEEECCCCCCCS---SCCCS---HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCcCCCC---CCCHH---HHHHHHHHHHHHHHHHHHhh
Confidence            89999999964321   11222   34677877777777766654

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.13  E-value=1.5e-05  Score=57.68  Aligned_cols=75  Identities=19%  Similarity=0.376  Sum_probs=56.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++++|+|+ |.+|+.+++.|.+.|++|++++++.+..+...+.   .  .+.++..|.++.+.+.+.      .....|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~--~~~~~~~d~~~~~~l~~~------~~~~~d   71 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I--DALVINGDCTKIKTLEDA------GIEDAD   71 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C--SSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c--CcEEEEcCCCCHHHHHHc------CcccCC
Confidence            457899987 9999999999999999999999987765544332   1  355678899887765331      134789


Q ss_pred             EEEECCC
Q 024976           92 ILVNAAA   98 (259)
Q Consensus        92 ~li~~ag   98 (259)
                      ++|.+.+
T Consensus        72 ~vi~~~~   78 (140)
T 1lss_A           72 MYIAVTG   78 (140)
T ss_dssp             EEEECCS
T ss_pred             EEEEeeC
Confidence            9999976

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.11  E-value=3.3e-05  Score=64.25  Aligned_cols=146  Identities=10%  Similarity=0.061  Sum_probs=87.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeC--ChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGR--RKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r--~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +++||||+|.+|..++..|+..|.  +++++++  +.++++....++...    +.++.+...+    +++       .+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l-------~~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DEN-------LR   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTC-------GG
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cch-------HH
Confidence            689999999999999999999885  5889998  665455433344321    1223332211    001       12


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-----
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----  160 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----  160 (259)
                      .+...|++|+.||.....   ..+.   ...+..|+..+..+.+++..+- +           +.++++|.....     
T Consensus        71 al~gaD~Vi~~Ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~-~-----------~~vlv~SNPv~~~t~~~  132 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE---GMSR---MDLAKTNAKIVGKYAKKIAEIC-D-----------TKIFVITNPVDVMTYKA  132 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHC-C-----------CEEEECSSSHHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHHHhC-C-----------eEEEEecCcHHHHHHHH
Confidence            234799999999964211   1232   3458889888888888887653 1           456666654432     


Q ss_pred             ---ccCccchhhHH-HHHHHHHHHHHHHHHhc
Q 024976          161 ---TATWYQIHVSA-AKAAVDSITRSLALEWG  188 (259)
Q Consensus       161 ---~~~~~~~~Y~~-sK~a~~~l~~~la~e~~  188 (259)
                         .+.+..-.++. +.--...+-..++..++
T Consensus       133 ~k~~~~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          133 LVDSKFERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             HHHHCCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHhhCcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence               12333334454 44334455556666654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.09  E-value=1.1e-05  Score=67.88  Aligned_cols=79  Identities=20%  Similarity=0.199  Sum_probs=56.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|++++|+|++|++|+.+++.+...|++|+.++++.++++.+. ++   +...   .+|.++.+-. +.+.++.. ..++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~~~-~~~~~~~~-~~~~  236 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPDWP-KEVRRLTG-GKGA  236 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTTHH-HHHHHHTT-TTCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCcccHH-HHHHHHhC-CCCc
Confidence            5789999999999999999999999999999999887766543 33   3322   2466654322 22222211 1379


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |++|+++|
T Consensus       237 d~vi~~~g  244 (343)
T 2eih_A          237 DKVVDHTG  244 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999999

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.04  E-value=1.5e-05  Score=66.85  Aligned_cols=79  Identities=18%  Similarity=0.239  Sum_probs=55.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc--
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~--   87 (259)
                      -.|++++|+||+|+||..++..+...|++|++++++.++++.. ++   .+....   .|..+.+..+.    +.+..  
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~~---~~~~~~~~~~~----~~~~~~~  215 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KE---YGAEYL---INASKEDILRQ----VLKFTNG  215 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSEE---EETTTSCHHHH----HHHHTTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCcEE---EeCCCchHHHH----HHHHhCC
Confidence            3689999999999999999999999999999999988766533 22   343322   24444332222    23322  


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      .++|++|+|+|.
T Consensus       216 ~g~D~vid~~g~  227 (334)
T 3qwb_A          216 KGVDASFDSVGK  227 (334)
T ss_dssp             SCEEEEEECCGG
T ss_pred             CCceEEEECCCh
Confidence            269999999993

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.03  E-value=9.8e-06  Score=66.93  Aligned_cols=77  Identities=21%  Similarity=0.198  Sum_probs=56.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++.....       ++.+.+++       .+..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-------~~~~~~~~-------~~~~  202 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-------AYFSLAEA-------ETRL  202 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-------CEECHHHH-------HHTG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-------ceeeHHHH-------Hhhh
Confidence            578999999998 6999999999999998 899999998888777766532110       11122222       2233


Q ss_pred             CCccEEEECCCCC
Q 024976           88 GKLDILVNAAAGN  100 (259)
Q Consensus        88 g~id~li~~ag~~  100 (259)
                      ...|+||++.+..
T Consensus       203 ~~aDivIn~t~~~  215 (297)
T 2egg_A          203 AEYDIIINTTSVG  215 (297)
T ss_dssp             GGCSEEEECSCTT
T ss_pred             ccCCEEEECCCCC
Confidence            5799999999854

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.03  E-value=7.9e-06  Score=68.33  Aligned_cols=79  Identities=18%  Similarity=0.135  Sum_probs=56.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc--
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~--   87 (259)
                      -.|++++|+||+|+||..++..+...|++|++++++.++++... ++   +....   .|.++.+..++    +.+..  
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~----~~~~~~~  207 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWET---IDYSHEDVAKR----VLELTDG  207 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHH----HHHHTTT
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EeCCCccHHHH----HHHHhCC
Confidence            35899999999999999999999999999999999887766443 33   33222   34444333222    33322  


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      .++|++|+|+|.
T Consensus       208 ~g~Dvvid~~g~  219 (325)
T 3jyn_A          208 KKCPVVYDGVGQ  219 (325)
T ss_dssp             CCEEEEEESSCG
T ss_pred             CCceEEEECCCh
Confidence            269999999993

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.01  E-value=2.9e-05  Score=68.00  Aligned_cols=85  Identities=18%  Similarity=0.155  Sum_probs=63.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEc--C--------CCCHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG--D--------VRKREDAVRV   79 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~--D--------l~~~~~~~~~   79 (259)
                      -.|++++|+|++|++|...+..+...|++|++++++.++++.+ +++   |....+...  |        ..+.++.+++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~  302 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRF  302 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHH
Confidence            4688999999999999999999999999999998887766544 333   333222211  1        2456777777


Q ss_pred             HHHHHHHcC--CccEEEECCC
Q 024976           80 VESTINHFG--KLDILVNAAA   98 (259)
Q Consensus        80 ~~~~~~~~g--~id~li~~ag   98 (259)
                      .+++.+..+  ++|++|.++|
T Consensus       303 ~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          303 GKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHHhCCCCCcEEEEcCC
Confidence            777777653  7999999998

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.01  E-value=1.5e-05  Score=67.09  Aligned_cols=78  Identities=21%  Similarity=0.287  Sum_probs=55.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g   88 (259)
                      -.|++++|+||+|+||..++..+...|++|++++++.++++.+.+ +   +... ++  |..  +++   .+++.+.. +
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~~-v~--~~~--~~~---~~~v~~~~~~  225 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V---GADI-VL--PLE--EGW---AKAVREATGG  225 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSE-EE--ESS--TTH---HHHHHHHTTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcE-Ee--cCc--hhH---HHHHHHHhCC
Confidence            358999999999999999999999999999999998887654433 3   3332 22  222  222   22333333 2


Q ss_pred             -CccEEEECCCC
Q 024976           89 -KLDILVNAAAG   99 (259)
Q Consensus        89 -~id~li~~ag~   99 (259)
                       ++|++|+++|.
T Consensus       226 ~g~Dvvid~~g~  237 (342)
T 4eye_A          226 AGVDMVVDPIGG  237 (342)
T ss_dssp             SCEEEEEESCC-
T ss_pred             CCceEEEECCch
Confidence             69999999994

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.01  E-value=1.5e-05  Score=67.00  Aligned_cols=79  Identities=15%  Similarity=0.135  Sum_probs=56.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc--
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~--   87 (259)
                      -.|++++|+|++++||..++..+...|++|++++++.++++.+.+ +   +....   .|..+.+..+    ++.+..  
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~---~~~~~~~~~~----~~~~~~~~  211 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYV---IDTSTAPLYE----TVMELTNG  211 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EETTTSCHHH----HHHHHTTT
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEE---EeCCcccHHH----HHHHHhCC
Confidence            458899999999999999999999999999999998887665443 3   33322   2444433222    222222  


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      .++|++|+|+|.
T Consensus       212 ~g~Dvvid~~g~  223 (340)
T 3gms_A          212 IGADAAIDSIGG  223 (340)
T ss_dssp             SCEEEEEESSCH
T ss_pred             CCCcEEEECCCC
Confidence            269999999993

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.99  E-value=3.3e-05  Score=65.60  Aligned_cols=78  Identities=19%  Similarity=0.149  Sum_probs=57.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++++++|+|+ |++|++++..+...|++|++++|+.++++.+.+....   .+..+   ..+.+++.+.+       .
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~~~---~~~~~~~~~~~-------~  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVELL---YSNSAEIETAV-------A  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEEE---ECCHHHHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeEee---eCCHHHHHHHH-------c
Confidence            367899999999 9999999999999999999999998887776554422   12222   23444443333       2


Q ss_pred             CccEEEECCCCC
Q 024976           89 KLDILVNAAAGN  100 (259)
Q Consensus        89 ~id~li~~ag~~  100 (259)
                      ..|++|++.+..
T Consensus       230 ~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 EADLLIGAVLVP  241 (361)
T ss_dssp             TCSEEEECCCCT
T ss_pred             CCCEEEECCCcC
Confidence            689999999853

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.97  E-value=4.9e-05  Score=62.11  Aligned_cols=76  Identities=17%  Similarity=0.248  Sum_probs=58.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++...+ .+.....+     ++.         
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~-----~l~---------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE-----QLK---------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG-----GCC---------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH-----Hhc---------
Confidence            3578999999998 6999999999999997 89999999999888888886543 34443221     110         


Q ss_pred             cCCccEEEECCCCC
Q 024976           87 FGKLDILVNAAAGN  100 (259)
Q Consensus        87 ~g~id~li~~ag~~  100 (259)
                       ...|+||++....
T Consensus       186 -~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 -QSYDVIINSTSAS  198 (281)
T ss_dssp             -SCEEEEEECSCCC
T ss_pred             -CCCCEEEEcCcCC
Confidence             3689999998743

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.95  E-value=3.5e-05  Score=65.48  Aligned_cols=75  Identities=17%  Similarity=0.235  Sum_probs=55.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|++++|+|+ |+||..++..+...|++|++++++.++++...++   .+...   ..|..+.+.+++       ..+++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~~---v~~~~~~~~~~~-------~~~~~  252 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGADS---FLVSRDQEQMQA-------AAGTL  252 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCSE---EEETTCHHHHHH-------TTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCce---EEeccCHHHHHH-------hhCCC
Confidence            6899999996 9999999999999999999999988776654433   34332   235555543322       23579


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |++|.++|.
T Consensus       253 D~vid~~g~  261 (366)
T 1yqd_A          253 DGIIDTVSA  261 (366)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCc
Confidence            999999994

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.90  E-value=3.2e-05  Score=65.71  Aligned_cols=75  Identities=21%  Similarity=0.307  Sum_probs=57.3

Q ss_pred             CCCCc--EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGK--VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k--~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++||  +++|.|| |++|+.+++.|++ ..+|.+.+++.+.++...       ..+..+.+|+.|.+++.++++     
T Consensus        11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~-----   76 (365)
T 3abi_A           11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK-----   76 (365)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT-----
T ss_pred             cccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh-----
Confidence            34444  7999998 9999999999875 578999999987665532       235678899999999888765     


Q ss_pred             cCCccEEEECCCC
Q 024976           87 FGKLDILVNAAAG   99 (259)
Q Consensus        87 ~g~id~li~~ag~   99 (259)
                        ..|+||++.+.
T Consensus        77 --~~DvVi~~~p~   87 (365)
T 3abi_A           77 --EFELVIGALPG   87 (365)
T ss_dssp             --TCSEEEECCCG
T ss_pred             --CCCEEEEecCC
Confidence              68999999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.90  E-value=4.2e-05  Score=64.91  Aligned_cols=78  Identities=14%  Similarity=0.117  Sum_probs=54.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|++++|+||+|+||..++..+...|++|++++++.++++.+.+    .+... .+  |..+. ++.+.+.+..  -+++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~-~~--~~~~~-~~~~~~~~~~--~~g~  232 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCDR-PI--NYKTE-PVGTVLKQEY--PEGV  232 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSE-EE--ETTTS-CHHHHHHHHC--TTCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCcE-EE--ecCCh-hHHHHHHHhc--CCCC
Confidence            58899999999999999999999999999999998776554432    34332 22  33332 2222232221  1379


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |++|+++|
T Consensus       233 D~vid~~g  240 (362)
T 2c0c_A          233 DVVYESVG  240 (362)
T ss_dssp             EEEEECSC
T ss_pred             CEEEECCC
Confidence            99999998

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.88  E-value=7.9e-05  Score=62.85  Aligned_cols=79  Identities=16%  Similarity=0.176  Sum_probs=54.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++++|+||+|+||..++..+...|++|++++++.++++.+. ++   +....   .|..+.+-.+.+.+ .... .++|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~v~~-~~~~-~g~D  235 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAHV---LNEKAPDFEATLRE-VMKA-EQPR  235 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSEE---EETTSTTHHHHHHH-HHHH-HCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EECCcHHHHHHHHH-HhcC-CCCc
Confidence            379999999999999999999999999999999888766543 33   33322   24444332222222 2211 2699


Q ss_pred             EEEECCCC
Q 024976           92 ILVNAAAG   99 (259)
Q Consensus        92 ~li~~ag~   99 (259)
                      ++|+++|.
T Consensus       236 ~vid~~g~  243 (349)
T 3pi7_A          236 IFLDAVTG  243 (349)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999993

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.88  E-value=4.9e-05  Score=61.85  Aligned_cols=75  Identities=20%  Similarity=0.183  Sum_probs=57.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++..  ..+....  +.+   +.       . 
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~--~~~---l~-------~-  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISR--YEA---LE-------G-  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEEC--SGG---GT-------T-
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEee--HHH---hc-------c-
Confidence            3578999999998 6999999999999997 899999999988888888754  2344332  221   11       0 


Q ss_pred             cCCccEEEECCCC
Q 024976           87 FGKLDILVNAAAG   99 (259)
Q Consensus        87 ~g~id~li~~ag~   99 (259)
                       ...|+|||+...
T Consensus       180 -~~~DivInaTp~  191 (272)
T 3pwz_A          180 -QSFDIVVNATSA  191 (272)
T ss_dssp             -CCCSEEEECSSG
T ss_pred             -cCCCEEEECCCC
Confidence             368999999764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.88  E-value=4.5e-05  Score=65.09  Aligned_cols=78  Identities=13%  Similarity=0.127  Sum_probs=58.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+.+++++|+|+ |+||+.+++.+...|++|++++++.++++...+.+   +..+.   ++..+.+++.+.+.      
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~~---~~~~~~~~l~~~l~------  230 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRIH---TRYSSAYELEGAVK------  230 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSSE---EEECCHHHHHHHHH------
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCeeE---eccCCHHHHHHHHc------
Confidence            3588999999998 99999999999999999999999988766654433   33322   23445555555443      


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                       ..|++|++++.
T Consensus       231 -~aDvVi~~~~~  241 (377)
T 2vhw_A          231 -RADLVIGAVLV  241 (377)
T ss_dssp             -HCSEEEECCCC
T ss_pred             -CCCEEEECCCc
Confidence             58999999885

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.86  E-value=7.3e-05  Score=60.03  Aligned_cols=80  Identities=18%  Similarity=0.292  Sum_probs=60.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh-------------------hhHHHHHHHHHhcCCC--eEEEE
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIP--AIGLE   67 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~-------------------~~~~~~~~~~~~~~~~--v~~~~   67 (259)
                      +++++++|.|+ ||+|.++++.|++.|. ++.++|++.                   .+.+.+.+.+...++.  +..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            56789999996 6999999999999998 699999987                   6777787888765443  45566


Q ss_pred             cCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           68 GDVRKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        68 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      .+++ .+.+.+++       ...|+||.+..
T Consensus       108 ~~~~-~~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          108 ALLD-DAELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             SCCC-HHHHHHHH-------HTSSEEEECCS
T ss_pred             ccCC-HhHHHHHH-------hCCCEEEEeCC
Confidence            6665 34444433       36899998865

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.85  E-value=0.00014  Score=52.95  Aligned_cols=73  Identities=15%  Similarity=0.136  Sum_probs=57.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +.++|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.+    .  .+.++.+|.++++.++++      ...+.|.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a------~i~~ad~   74 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLA------HLECAKW   74 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHT------TGGGCSE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhc------CcccCCE
Confidence            46778886 789999999999999999999999887665443    2  367889999999876653      1236899


Q ss_pred             EEECCC
Q 024976           93 LVNAAA   98 (259)
Q Consensus        93 li~~ag   98 (259)
                      +|.+.+
T Consensus        75 vi~~~~   80 (140)
T 3fwz_A           75 LILTIP   80 (140)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            998877

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.85  E-value=8.4e-05  Score=62.44  Aligned_cols=77  Identities=18%  Similarity=0.199  Sum_probs=55.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|++++|+|+ |++|..++..+...|++|+.++++.++++.+.    +.+...   .+|.++.+ +.+.+.++   .+++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~---~~d~~~~~-~~~~~~~~---~~~~  231 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----ELGADL---VVNPLKED-AAKFMKEK---VGGV  231 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTCSE---EECTTTSC-HHHHHHHH---HSSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HCCCCE---EecCCCcc-HHHHHHHH---hCCC
Confidence            5789999999 88999999999999999999999887765543    234332   24666532 22222222   2689


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |++|+++|.
T Consensus       232 d~vid~~g~  240 (339)
T 1rjw_A          232 HAAVVTAVS  240 (339)
T ss_dssp             EEEEESSCC
T ss_pred             CEEEECCCC
Confidence            999999983

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.85  E-value=6.1e-05  Score=55.82  Aligned_cols=78  Identities=14%  Similarity=0.209  Sum_probs=57.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ...+++++|+|+ |.+|+.+++.|.+.|++|++++++++..+.+.+   .  .....+..|.++.+.+.+.      ...
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~--~g~~~~~~d~~~~~~l~~~------~~~   83 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E--FSGFTVVGDAAEFETLKEC------GME   83 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T--CCSEEEESCTTSHHHHHTT------TGG
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c--CCCcEEEecCCCHHHHHHc------Ccc
Confidence            356789999986 899999999999999999999998776543211   1  1345677888886654321      123


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      ..|++|.+.+
T Consensus        84 ~ad~Vi~~~~   93 (155)
T 2g1u_A           84 KADMVFAFTN   93 (155)
T ss_dssp             GCSEEEECSS
T ss_pred             cCCEEEEEeC
Confidence            6899999987

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.82  E-value=0.00031  Score=59.45  Aligned_cols=83  Identities=14%  Similarity=0.146  Sum_probs=59.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .|++++|+|+ |++|...+..+...|++ |++++++.++++.+. ++   ...+..+..|-.+.+++.+.+.+... -.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g  252 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI---CPEVVTHKVERLSAEESAKKIVESFG-GIE  252 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH---CTTCEEEECCSCCHHHHHHHHHHHTS-SCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---chhcccccccccchHHHHHHHHHHhC-CCC
Confidence            5789999998 99999999888889997 889998887765544 33   23455666666666655444433221 126


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|++|.+.|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.82  E-value=4.7e-05  Score=58.02  Aligned_cols=78  Identities=18%  Similarity=0.126  Sum_probs=58.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.+++++|.| .|.+|..+++.|.+. |++|+++++++++.+.+.    ..+  +..+.+|.++.+.+.++     ...
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g--~~~~~gd~~~~~~l~~~-----~~~  103 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG--RNVISGDATDPDFWERI-----LDT  103 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT--CCEEECCTTCHHHHHTB-----CSC
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC--CCEEEcCCCCHHHHHhc-----cCC
Confidence            35577889998 589999999999999 999999999987655433    223  55678899988765432     012


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      ...|.+|.+.+
T Consensus       104 ~~ad~vi~~~~  114 (183)
T 3c85_A          104 GHVKLVLLAMP  114 (183)
T ss_dssp             CCCCEEEECCS
T ss_pred             CCCCEEEEeCC
Confidence            46899998876

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.80  E-value=0.00032  Score=58.00  Aligned_cols=100  Identities=6%  Similarity=-0.073  Sum_probs=65.5

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeC--ChhhHHHHHHHHHhc---CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGR--RKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r--~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++||||+|.+|..++..|+..|.  +++++|+  +.++++....++...   ..++.+.. +  +.           +.
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~-----------~a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY-----------ED   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH-----------HH
Confidence            689999999999999999999885  5899998  766555544455432   23334333 2  21           12


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHH
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK  133 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  133 (259)
                      +...|++|+.+|.....   ..+..   ..+..|+.....+.+++..
T Consensus        68 ~~~aDvVi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i~~  108 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP---GQTRI---DLAGDNAPIMEDIQSSLDE  108 (303)
T ss_dssp             GTTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHT
T ss_pred             hCCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHH
Confidence            34799999999964211   12333   3467777776666666553

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.78  E-value=9.5e-05  Score=62.29  Aligned_cols=76  Identities=13%  Similarity=0.159  Sum_probs=54.3

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-CC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g~   89 (259)
                      .|++++|+||+|++|..++..+...|++|+.++++.++++.+.+ +   +... +  .|..+  ++   .+++.+.. ++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~-v--i~~~~--~~---~~~~~~~~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GADI-V--LNHKE--SL---LNQFKTQGIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCSE-E--ECTTS--CH---HHHHHHHTCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcE-E--EECCc--cH---HHHHHHhCCCC
Confidence            58999999999999999999999999999999998876655443 3   3322 2  23332  22   22233322 37


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|+++.++|
T Consensus       218 ~Dvv~d~~g  226 (346)
T 3fbg_A          218 VDYVFCTFN  226 (346)
T ss_dssp             EEEEEESSC
T ss_pred             ccEEEECCC
Confidence            999999998

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.76  E-value=8.3e-05  Score=61.38  Aligned_cols=74  Identities=18%  Similarity=0.267  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|++++|+|++|++|..++..+...|++|+.++++.++++... +   .+....   .|..+.++   +.+++    +++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~~---~~~~~~~~---~~~~~----~~~  190 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAEEA---ATYAEVPE---RAKAW----GGL  190 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCSEE---EEGGGHHH---HHHHT----TSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCEE---EECCcchh---HHHHh----cCc
Confidence            5889999999999999999999999999999999887765543 2   343221   34444122   22222    579


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |++|+ +|.
T Consensus       191 d~vid-~g~  198 (302)
T 1iz0_A          191 DLVLE-VRG  198 (302)
T ss_dssp             EEEEE-CSC
T ss_pred             eEEEE-CCH
Confidence            99999 883

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.74  E-value=0.0001  Score=57.83  Aligned_cols=73  Identities=15%  Similarity=0.237  Sum_probs=57.9

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++|+|+ |.+|+.+++.|.++|++|++++++++..+.+.+..     .+.++.+|.++++.++++      .....|.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a------~i~~ad~v   69 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDA------EVSKNDVV   69 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHH------TCCTTCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhc------CcccCCEE
Confidence            5899996 89999999999999999999999988766544332     367899999998876654      12467888


Q ss_pred             EECCC
Q 024976           94 VNAAA   98 (259)
Q Consensus        94 i~~ag   98 (259)
                      |.+.+
T Consensus        70 i~~~~   74 (218)
T 3l4b_C           70 VILTP   74 (218)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            88766

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.72  E-value=5.8e-05  Score=62.30  Aligned_cols=95  Identities=20%  Similarity=0.237  Sum_probs=60.9

Q ss_pred             CCCCcE-EEEeCCcc-----------------c-hHHHHHHHHHHcCCeEEEEeCChhhH--------HHHHHHHHh---
Q 024976            9 ILKGKV-ALLTGGGS-----------------G-IGFEISLQLGKHGAAIAIMGRRKTVL--------RSAVAALHS---   58 (259)
Q Consensus         9 ~l~~k~-~lItGa~~-----------------g-iG~~~a~~l~~~G~~vv~~~r~~~~~--------~~~~~~~~~---   58 (259)
                      ++.||+ +|||+|..                 | .|.++|+.++++|+.|+++.+...-.        ....+.+..   
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            367887 99995543                 4 99999999999999999987753210        000111110   


Q ss_pred             cCCCeEEEEcCCCCHHHHHHHHHHH------------------------------HHHcCCccEEEECCCCCCCC
Q 024976           59 LGIPAIGLEGDVRKREDAVRVVEST------------------------------INHFGKLDILVNAAAGNFLV  103 (259)
Q Consensus        59 ~~~~v~~~~~Dl~~~~~~~~~~~~~------------------------------~~~~g~id~li~~ag~~~~~  103 (259)
                      ....+..+.+|+...+++.+.+.+.                              .+.+++.|++|.+|++....
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence            1123455666666665555555433                              24457899999999987654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.70  E-value=0.00013  Score=61.38  Aligned_cols=77  Identities=17%  Similarity=0.211  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g   88 (259)
                      .|++++|+|+ |++|..++..+...|+ +|+.++++.++++.+. ++   +... +  .|..+.+ +   .+++.+.. +
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~~-~--~~~~~~~-~---~~~v~~~~~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GADY-V--INPFEED-V---VKEVMDITDG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCSE-E--ECTTTSC-H---HHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCE-E--ECCCCcC-H---HHHHHHHcCC
Confidence            7899999999 9999999999999999 8999999877655433 33   3321 2  3444422 2   22233322 2


Q ss_pred             -CccEEEECCCC
Q 024976           89 -KLDILVNAAAG   99 (259)
Q Consensus        89 -~id~li~~ag~   99 (259)
                       ++|++|.++|.
T Consensus       235 ~g~D~vid~~g~  246 (348)
T 2d8a_A          235 NGVDVFLEFSGA  246 (348)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence             69999999993

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.69  E-value=2.2e-05  Score=57.46  Aligned_cols=70  Identities=16%  Similarity=0.223  Sum_probs=52.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++++|.|+ |++|+.+++.|.+.|++|++++|+.++.+.+.+++.     ....  +..+.   .+.++       ..|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-----~~~~--~~~~~---~~~~~-------~~D   82 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-----YEYV--LINDI---DSLIK-------NND   82 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-----CEEE--ECSCH---HHHHH-------TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-----CceE--eecCH---HHHhc-------CCC
Confidence            789999996 899999999999999998899999888777766653     1221  22333   22222       589


Q ss_pred             EEEECCCC
Q 024976           92 ILVNAAAG   99 (259)
Q Consensus        92 ~li~~ag~   99 (259)
                      ++|.+.+.
T Consensus        83 ivi~at~~   90 (144)
T 3oj0_A           83 VIITATSS   90 (144)
T ss_dssp             EEEECSCC
T ss_pred             EEEEeCCC
Confidence            99999884

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.68  E-value=0.00011  Score=61.85  Aligned_cols=77  Identities=22%  Similarity=0.293  Sum_probs=52.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+|+||..++..+...|++|+++ ++.++++.+ +++   +...    +| .+.+ +.+.+.+... ..+
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~----i~-~~~~-~~~~~~~~~~-~~g  216 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP----ID-ASRE-PEDYAAEHTA-GQG  216 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE----EE-TTSC-HHHHHHHHHT-TSC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE----ec-cCCC-HHHHHHHHhc-CCC
Confidence            358899999999999999999999999999988 666654433 333   4332    34 3222 2222222221 136


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|.++|
T Consensus       217 ~D~vid~~g  225 (343)
T 3gaz_A          217 FDLVYDTLG  225 (343)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999998

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.64  E-value=9.3e-05  Score=62.25  Aligned_cols=77  Identities=21%  Similarity=0.247  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .|++++|+|+ |++|...+..+...|+ +|+.++++.++++.+.+ +    .. .  ..|..+. ++.+.+.++.  .++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~-~--v~~~~~~-~~~~~~~~~~--~~g  231 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----AD-R--LVNPLEE-DLLEVVRRVT--GSG  231 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CS-E--EECTTTS-CHHHHHHHHH--SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HH-h--ccCcCcc-CHHHHHHHhc--CCC
Confidence            7899999999 9999999998888999 89999998766543322 1    11 1  2344442 2333333332  247


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|++|.+.|.
T Consensus       232 ~D~vid~~g~  241 (343)
T 2dq4_A          232 VEVLLEFSGN  241 (343)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999993

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.63  E-value=0.00024  Score=60.14  Aligned_cols=84  Identities=18%  Similarity=0.147  Sum_probs=51.9

Q ss_pred             CC-cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH---
Q 024976           11 KG-KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH---   86 (259)
Q Consensus        11 ~~-k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~---   86 (259)
                      .| .+++|+||+|++|...+..+...|++|+.+.++.+++.+..+.+++.|....+   |-.+. ...++.+++.+.   
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~-~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQN-NSREFGPTIKEWIKQ  241 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHH-HCGGGHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCcc-chHHHHHHHHHHhhc
Confidence            57 89999999999999999888888999888876655422222223333443222   21110 001222333322   


Q ss_pred             -cCCccEEEECCC
Q 024976           87 -FGKLDILVNAAA   98 (259)
Q Consensus        87 -~g~id~li~~ag   98 (259)
                       .+++|++|.+.|
T Consensus       242 ~~~g~Dvvid~~G  254 (364)
T 1gu7_A          242 SGGEAKLALNCVG  254 (364)
T ss_dssp             HTCCEEEEEESSC
T ss_pred             cCCCceEEEECCC
Confidence             247999999999

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.62  E-value=0.0005  Score=56.31  Aligned_cols=90  Identities=12%  Similarity=0.167  Sum_probs=66.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh------------------hhHHHHHHHHHhcCC--CeEEE
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK------------------TVLRSAVAALHSLGI--PAIGL   66 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~------------------~~~~~~~~~~~~~~~--~v~~~   66 (259)
                      ..|++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                  .+.+.+.+.+...++  ++..+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            3477889999987 5999999999999998 599998865                  566666777766554  45566


Q ss_pred             EcCCCCHHHHHHHHHHHHHH----cCCccEEEECCC
Q 024976           67 EGDVRKREDAVRVVESTINH----FGKLDILVNAAA   98 (259)
Q Consensus        67 ~~Dl~~~~~~~~~~~~~~~~----~g~id~li~~ag   98 (259)
                      ..++++.+.+..+++.+...    ...+|+||.+..
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            77888777777776544321    136899987654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.54  E-value=0.00024  Score=61.18  Aligned_cols=73  Identities=22%  Similarity=0.289  Sum_probs=54.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.++..+++   +.  ..  .+..   ++.+.+       
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~--~~--~~~~---~l~~~l-------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GG--EA--VRFD---ELVDHL-------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TC--EE--CCGG---GHHHHH-------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CC--ce--ecHH---hHHHHh-------
Confidence            478999999998 9999999999999999 8999999987766666555   22  11  2222   233322       


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ...|+||.+.+.
T Consensus       226 ~~aDvVi~at~~  237 (404)
T 1gpj_A          226 ARSDVVVSATAA  237 (404)
T ss_dssp             HTCSEEEECCSS
T ss_pred             cCCCEEEEccCC
Confidence            268999999873

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.53  E-value=0.00031  Score=59.75  Aligned_cols=77  Identities=17%  Similarity=0.259  Sum_probs=52.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+|+||..++..+...|++|+.+++ .++.+.+ +   +.+....   .|..+.+-.    +++.+ .++
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~---~lGa~~v---~~~~~~~~~----~~~~~-~~g  248 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-R---KLGADDV---IDYKSGSVE----EQLKS-LKP  248 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-H---HTTCSEE---EETTSSCHH----HHHHT-SCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-H---HcCCCEE---EECCchHHH----HHHhh-cCC
Confidence            36889999999999999999998899999988874 4444332 3   3344322   244433222    22222 257


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|++|.++|.
T Consensus       249 ~D~vid~~g~  258 (375)
T 2vn8_A          249 FDFILDNVGG  258 (375)
T ss_dssp             BSEEEESSCT
T ss_pred             CCEEEECCCC
Confidence            9999999993

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.45  E-value=0.00032  Score=58.83  Aligned_cols=118  Identities=9%  Similarity=0.039  Sum_probs=71.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +.++++.|+|++|.+|..++..++..|.  +|+++|.+.++++....++....   .++.+ .   +|.   .+      
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~---~~------   72 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDI---KE------   72 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCH---HH------
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCH---HH------
Confidence            4678999999999999999999999984  79999999887777666665431   11211 1   121   11      


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCce-EEEecccc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI-IINISATL  158 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~-iv~isS~~  158 (259)
                       .+...|++|.++|.... +  ..+   -.+.+..|+.-    ++.+.+.+.+...       .+. ++++|...
T Consensus        73 -al~dADvVvitaG~p~k-p--G~~---R~dLl~~N~~I----~~~i~~~i~~~~p-------~a~~vlvvsNPv  129 (343)
T 3fi9_A           73 -ALTDAKYIVSSGGAPRK-E--GMT---REDLLKGNAEI----AAQLGKDIKSYCP-------DCKHVIIIFNPA  129 (343)
T ss_dssp             -HHTTEEEEEECCC----------C---HHHHHHHHHHH----HHHHHHHHHHHCT-------TCCEEEECSSSH
T ss_pred             -HhCCCCEEEEccCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHHHhcc-------CcEEEEEecCch
Confidence             22368999999995321 1  122   23445555544    4444555544322       253 66666543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.45  E-value=0.00062  Score=57.06  Aligned_cols=77  Identities=18%  Similarity=0.207  Sum_probs=53.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+|+ |++|...+..+...|++|+.++++.++++.+ +   +.+....   .|..+.+..+.    +.+..++
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~---~lGa~~~---i~~~~~~~~~~----~~~~~g~  232 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-R---RLGAEVA---VNARDTDPAAW----LQKEIGG  232 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-H---HTTCSEE---EETTTSCHHHH----HHHHHSS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-H---HcCCCEE---EeCCCcCHHHH----HHHhCCC
Confidence            36889999997 8999999999889999999999988766543 2   3344332   24443322222    2223468


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|.++|
T Consensus       233 ~d~vid~~g  241 (340)
T 3s2e_A          233 AHGVLVTAV  241 (340)
T ss_dssp             EEEEEESSC
T ss_pred             CCEEEEeCC
Confidence            999999988

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.43  E-value=0.00072  Score=54.26  Aligned_cols=80  Identities=18%  Similarity=0.269  Sum_probs=56.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh-------------------hhHHHHHHHHHhcCCC--eEEEE
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIP--AIGLE   67 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~-------------------~~~~~~~~~~~~~~~~--v~~~~   67 (259)
                      +++++++|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+...++.  +..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            66789999998 5899999999999998 588887642                   5566677777665544  44454


Q ss_pred             cCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           68 GDVRKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        68 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      .+++ .+.+.++++       ..|+||.+..
T Consensus       105 ~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          105 QRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             SCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             ccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            4554 344444443       4799998754

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.42  E-value=0.0018  Score=52.30  Aligned_cols=66  Identities=20%  Similarity=0.293  Sum_probs=51.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|+++|.|+ ||.|++++..|++.|.+|.+++|+.++.+++. ++.     +...  +..+.              ...|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~~--~~~~l--------------~~~D  174 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDCF--MEPPK--------------SAFD  174 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEEE--SSCCS--------------SCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeEe--cHHHh--------------ccCC
Confidence            899999997 89999999999999988999999999888877 552     2222  22221              1689


Q ss_pred             EEEECCCCC
Q 024976           92 ILVNAAAGN  100 (259)
Q Consensus        92 ~li~~ag~~  100 (259)
                      +|||+....
T Consensus       175 iVInaTp~G  183 (269)
T 3phh_A          175 LIINATSAS  183 (269)
T ss_dssp             EEEECCTTC
T ss_pred             EEEEcccCC
Confidence            999997643

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.41  E-value=0.0088  Score=49.76  Aligned_cols=117  Identities=16%  Similarity=0.184  Sum_probs=74.3

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC----CCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..+++.|+|+ |.+|.+++..|+..|.  +|+++|++.++++....++....    ..+.....|              .
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--------------~   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--------------Y   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--------------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc--------------H
Confidence            3568999996 9999999999999997  79999999888777666665431    233333222              1


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      +.+...|++|.++|.... +  ..+..   ..+..|+.    .++.+.+.+.+...       .+.++++|....
T Consensus        69 ~a~~~aDvVvi~ag~p~k-p--G~~R~---dL~~~N~~----Iv~~i~~~I~~~~p-------~a~vlvvtNPvd  126 (326)
T 3pqe_A           69 EDCKDADIVCICAGANQK-P--GETRL---ELVEKNLK----IFKGIVSEVMASGF-------DGIFLVATNPVD  126 (326)
T ss_dssp             GGGTTCSEEEECCSCCCC-T--TCCHH---HHHHHHHH----HHHHHHHHHHHTTC-------CSEEEECSSSHH
T ss_pred             HHhCCCCEEEEecccCCC-C--CccHH---HHHHHHHH----HHHHHHHHHHHhcC-------CeEEEEcCChHH
Confidence            223468999999995321 1  22322   33455544    34444555544321       266777776543

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.40  E-value=0.0013  Score=54.73  Aligned_cols=119  Identities=13%  Similarity=0.116  Sum_probs=69.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      ++..++++.|+|+ |.+|.+++..|+..|.  +|+++|+++++++....++....   ..+.+...|             
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------------   70 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------------   70 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------------
Confidence            3456789999996 8999999999999987  79999999888887777776432   123333222             


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                       .+.+...|++|.++|....      +-++-.+.++.|.--    ++.+.+.+.+...       .+.++++|...
T Consensus        71 -~~a~~~aDiVvi~ag~~~k------pG~tR~dL~~~N~~I----~~~i~~~i~~~~p-------~a~ilvvtNPv  128 (326)
T 3vku_A           71 -YSDAKDADLVVITAGAPQK------PGETRLDLVNKNLKI----LKSIVDPIVDSGF-------NGIFLVAANPV  128 (326)
T ss_dssp             -GGGGTTCSEEEECCCCC----------------------C----HHHHHHHHHTTTC-------CSEEEECSSSH
T ss_pred             -HHHhcCCCEEEECCCCCCC------CCchHHHHHHHHHHH----HHHHHHHHHhcCC-------ceEEEEccCch
Confidence             1234578999999996321      111223445555543    4444555544321       26677777654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.38  E-value=0.00016  Score=60.53  Aligned_cols=119  Identities=11%  Similarity=0.111  Sum_probs=71.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC--e-----EEEEeCCh--hhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA--A-----IAIMGRRK--TVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~--~-----vv~~~r~~--~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ..+++||||+|.||..++..|+..|.  +     ++++|.++  +.++....++.... +-..-+.  .++  .      
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~--~~~--~------   72 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--ATD--K------   72 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EES--C------
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEE--EcC--C------
Confidence            36899999999999999999998875  5     99999874  35666666666532 2121111  111  1      


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEecccc
Q 024976           82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATL  158 (259)
Q Consensus        82 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~  158 (259)
                       ..+.+...|++|+.||.... +  ..+   -...++.|+.....+.+.+    .+...       .+ .++++|...
T Consensus        73 -~~~~~~daDvVvitAg~prk-p--G~t---R~dll~~N~~i~~~i~~~i----~~~~~-------~~~~vivvsNPv  132 (333)
T 5mdh_A           73 -EEIAFKDLDVAILVGSMPRR-D--GME---RKDLLKANVKIFKCQGAAL----DKYAK-------KSVKVIVVGNPA  132 (333)
T ss_dssp             -HHHHTTTCSEEEECCSCCCC-T--TCC---TTTTHHHHHHHHHHHHHHH----HHHSC-------TTCEEEECSSSH
T ss_pred             -cHHHhCCCCEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHH----HHhCC-------CCeEEEEcCCch
Confidence             11223478999999985421 1  122   2345666666555554444    44321       24 477776644

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.34  E-value=0.0026  Score=53.60  Aligned_cols=78  Identities=22%  Similarity=0.320  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCC--CHHHHHHHHHHHHHHc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR--KREDAVRVVESTINHF   87 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~--~~~~~~~~~~~~~~~~   87 (259)
                      .|++++|+|+ |++|...+..+...|+ +|++++++.++++.+.    +.+... ++  |..  +.++..+.+.+...  
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~-vi--~~~~~~~~~~~~~i~~~~~--  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK----EIGADL-VL--QISKESPQEIARKVEGQLG--  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCSE-EE--ECSSCCHHHHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCCCE-EE--cCcccccchHHHHHHHHhC--
Confidence            5789999996 8999999988888999 8999998877654432    234432 22  333  23333222222222  


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      +++|++|.+.|
T Consensus       241 ~g~D~vid~~g  251 (356)
T 1pl8_A          241 CKPEVTIECTG  251 (356)
T ss_dssp             SCCSEEEECSC
T ss_pred             CCCCEEEECCC
Confidence            47999999998

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.34  E-value=0.0016  Score=55.99  Aligned_cols=43  Identities=14%  Similarity=0.150  Sum_probs=38.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      .+.+++++|+|+ |.+|+.+++.+...|++|++++++.++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367899999996 7999999999999999999999998876654

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.34  E-value=5e-05  Score=61.92  Aligned_cols=71  Identities=15%  Similarity=0.192  Sum_probs=50.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+       .+...     ..+++.+.       .
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-------~~~~~-----~~~~~~~~-------~  173 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-------NINKI-----NLSHAESH-------L  173 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-------CCEEE-----CHHHHHHT-------G
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-------hcccc-----cHhhHHHH-------h
Confidence            578999999997 7999999999999999 79999999876544332       11111     23333222       2


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ...|+||++...
T Consensus       174 ~~aDiVInaTp~  185 (277)
T 3don_A          174 DEFDIIINTTPA  185 (277)
T ss_dssp             GGCSEEEECCC-
T ss_pred             cCCCEEEECccC
Confidence            368999999764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.33  E-value=0.00031  Score=58.56  Aligned_cols=75  Identities=16%  Similarity=0.149  Sum_probs=49.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++|+|++|++|...+..+...|++|+.++++.++++.+. +   .+....   +|..+.+  .+.++++.  .+++|++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~---lGa~~~---i~~~~~~--~~~~~~~~--~~~~d~v  220 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V---LGAKEV---LAREDVM--AERIRPLD--KQRWAAA  220 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H---TTCSEE---EECC-----------CC--SCCEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-H---cCCcEE---EecCCcH--HHHHHHhc--CCcccEE
Confidence            7999999999999999999899999999999877665543 2   343322   2444332  12222221  1469999


Q ss_pred             EECCCC
Q 024976           94 VNAAAG   99 (259)
Q Consensus        94 i~~ag~   99 (259)
                      |.++|.
T Consensus       221 id~~g~  226 (328)
T 1xa0_A          221 VDPVGG  226 (328)
T ss_dssp             EECSTT
T ss_pred             EECCcH
Confidence            999983

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.31  E-value=0.0029  Score=53.25  Aligned_cols=80  Identities=20%  Similarity=0.248  Sum_probs=52.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHH-HcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTIN-HFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~-~~g   88 (259)
                      .|++++|+|+ |++|...+..+...|++|++++++.++++.+.    +.+... .+  |..+ .+..+++.+...+ .-+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~-~~--~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGADV-TL--VVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSE-EE--ECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----HhCCCE-EE--cCcccccHHHHHHHHhccccCC
Confidence            5789999997 89999999988889999989998877655432    334432 22  3332 2222222221110 013


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      ++|++|.+.|
T Consensus       240 g~D~vid~~g  249 (352)
T 1e3j_A          240 LPNVTIDCSG  249 (352)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6999999998

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.31  E-value=0.00052  Score=58.13  Aligned_cols=79  Identities=22%  Similarity=0.208  Sum_probs=53.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+| +|++|...+..+...|++|++++++.++++.+ +++   |.... +  | .+.+++.+.+.++.. ..+
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v-i--~-~~~~~~~~~v~~~~~-g~g  257 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GADHG-I--N-RLEEDWVERVYALTG-DRG  257 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSEE-E--E-TTTSCHHHHHHHHHT-TCC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCCEE-E--c-CCcccHHHHHHHHhC-CCC
Confidence            3578999999 89999999999989999999999988766553 333   43322 2  3 332233333322221 126


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|.++|
T Consensus       258 ~D~vid~~g  266 (363)
T 3uog_A          258 ADHILEIAG  266 (363)
T ss_dssp             EEEEEEETT
T ss_pred             ceEEEECCC
Confidence            999999998

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.29  E-value=0.0014  Score=54.42  Aligned_cols=116  Identities=14%  Similarity=0.148  Sum_probs=68.4

Q ss_pred             EEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcCCC--eEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIP--AIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~~~--v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++.|+||+|.+|..++..|+..|  .+|+++|+++  .+....++.+....  +.... ..+|   .++.       +..
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~-~t~d---~~~a-------~~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL-GPEQ---LPDC-------LKG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE-SGGG---HHHH-------HTT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec-CCCC---HHHH-------hCC
Confidence            68999999999999999999988  5799999987  34444455433221  22211 0012   2222       237


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      .|++|+++|.....   ..+..   ..+..|+.....+.+.+.++-   .        .+.++++|-...
T Consensus        69 aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~~---p--------~a~viv~sNPv~  121 (314)
T 1mld_A           69 CDVVVIPAGVPRKP---GMTRD---DLFNTNATIVATLTAACAQHC---P--------DAMICIISNPVN  121 (314)
T ss_dssp             CSEEEECCSCCCCT---TCCGG---GGHHHHHHHHHHHHHHHHHHC---T--------TSEEEECSSCHH
T ss_pred             CCEEEECCCcCCCC---CCcHH---HHHHHHHHHHHHHHHHHHhhC---C--------CeEEEEECCCcc
Confidence            89999999964321   12222   234555554444444444321   2        277888766544

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.28  E-value=0.0015  Score=54.52  Aligned_cols=89  Identities=20%  Similarity=0.206  Sum_probs=56.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh-------------------hhHHHHHHHHHhcCCCeE--EE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIPAI--GL   66 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~-------------------~~~~~~~~~~~~~~~~v~--~~   66 (259)
                      .+++++++|.|++ |+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+...++.+.  .+
T Consensus        31 kL~~~~VlIvGaG-GlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            3678899999875 999999999999998 588888743                   456666777766655544  44


Q ss_pred             EcCC-------CCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           67 EGDV-------RKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        67 ~~Dl-------~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      ..++       ++++....-.+.+.+.+...|+||.+..
T Consensus       110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD  148 (340)
T 3rui_A          110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  148 (340)
T ss_dssp             CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC
Confidence            4333       2221111111112222336899988766

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.27  E-value=0.0005  Score=54.41  Aligned_cols=72  Identities=11%  Similarity=0.062  Sum_probs=55.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+...       ..+.++.+|.++++.++++      .....|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a------~i~~ad   73 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKA------NVRGAR   73 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-------TTCEEEESCTTCHHHHHHT------TCTTCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-------cCCeEEEcCCCCHHHHHhc------Ccchhc
Confidence            467889997 7999999999999999 999999887654432       2377899999998876554      123678


Q ss_pred             EEEECCC
Q 024976           92 ILVNAAA   98 (259)
Q Consensus        92 ~li~~ag   98 (259)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (234)
T 2aef_A           74 AVIVDLE   80 (234)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            8887765

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.26  E-value=0.0014  Score=55.37  Aligned_cols=77  Identities=19%  Similarity=0.279  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC-
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g-   88 (259)
                      .|++++|+|+ |++|...+..+... |++|+.++++.++++.+.    +.|....   .|..+.  +.+.+.++.  .+ 
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~--~~~~v~~~~--~g~  253 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADHV---VDARRD--PVKQVMELT--RGR  253 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSEE---EETTSC--HHHHHHHHT--TTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----HhCCCEE---Eeccch--HHHHHHHHh--CCC
Confidence            5789999999 89999999888888 999999999877655443    2343322   244443  333333222  13 


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      ++|++|.+.|.
T Consensus       254 g~Dvvid~~G~  264 (359)
T 1h2b_A          254 GVNVAMDFVGS  264 (359)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCcEEEECCCC
Confidence            69999999993

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.25  E-value=0.0042  Score=52.67  Aligned_cols=84  Identities=18%  Similarity=0.179  Sum_probs=57.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCC-----------CCHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV-----------RKREDAV   77 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl-----------~~~~~~~   77 (259)
                      .+.+++++|+|+ |.+|..+++.+...|++|++++++.++++...+ +   |.  .++..|+           ...+...
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l---Ga--~~~~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V---GA--QWLDLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T---TC--EECCCC-------------CHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CC--eEEeccccccccccchhhhhHHHHh
Confidence            357899999998 699999999999999999999999887766543 2   32  2332221           0011122


Q ss_pred             HHHHHHHHHcCCccEEEECCCC
Q 024976           78 RVVESTINHFGKLDILVNAAAG   99 (259)
Q Consensus        78 ~~~~~~~~~~g~id~li~~ag~   99 (259)
                      .-.+.+.+.....|++|.++..
T Consensus       254 ~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          254 QQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHHTTCSEEEECCCC
T ss_pred             hhHHHHHHHHhcCCEEEECCCC
Confidence            2233344445689999998754

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.23  E-value=0.0012  Score=56.14  Aligned_cols=80  Identities=16%  Similarity=0.176  Sum_probs=53.5

Q ss_pred             CCcEEEEeC-CccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTG-GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItG-a~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .|.+++|.| |+|++|...+..+...|++|+.++++.++++.+.    +.+....+   |-.+.+-.+++.+ +... .+
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~~---~~~~~~~~~~v~~-~t~~-~g  240 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK----AQGAVHVC---NAASPTFMQDLTE-ALVS-TG  240 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH----HTTCSCEE---ETTSTTHHHHHHH-HHHH-HC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCcEEE---eCCChHHHHHHHH-HhcC-CC
Confidence            578899997 9999999999988889999999998877655443    23443222   3333222222222 2111 26


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|++|.+.|.
T Consensus       241 ~d~v~d~~g~  250 (379)
T 3iup_A          241 ATIAFDATGG  250 (379)
T ss_dssp             CCEEEESCEE
T ss_pred             ceEEEECCCc
Confidence            9999999993

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.21  E-value=0.0015  Score=55.49  Aligned_cols=74  Identities=20%  Similarity=0.254  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|.+++|+|+ |++|...+..+...|++|+.++++.++++.+. ++   +... +  .|..+.+.++    ++.   +++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~~-v--i~~~~~~~~~----~~~---~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GADE-V--VNSRNADEMA----AHL---KSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSE-E--EETTCHHHHH----TTT---TCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcE-E--eccccHHHHH----Hhh---cCC
Confidence            5789999998 78999999988889999999999888766544 33   3322 1  3555544322    221   579


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |++|.+.|.
T Consensus       259 Dvvid~~g~  267 (369)
T 1uuf_A          259 DFILNTVAA  267 (369)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCC
Confidence            999999994

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.21  E-value=0.0019  Score=54.77  Aligned_cols=78  Identities=14%  Similarity=0.101  Sum_probs=52.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g   88 (259)
                      -.|++++|+||+|++|...+..+...|++|+.+. +.++++ ..+   +.|.... +  |..+.+ +   .+++.+.. +
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~---~lGa~~v-i--~~~~~~-~---~~~v~~~t~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAK---SRGAEEV-F--DYRAPN-L---AQTIRTYTKN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHH---HTTCSEE-E--ETTSTT-H---HHHHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHH---HcCCcEE-E--ECCCch-H---HHHHHHHccC
Confidence            4689999999999999999999999999988776 455444 233   3344322 2  334332 2   22233322 4


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      ++|++|.+.|.
T Consensus       231 ~~d~v~d~~g~  241 (371)
T 3gqv_A          231 NLRYALDCITN  241 (371)
T ss_dssp             CCCEEEESSCS
T ss_pred             CccEEEECCCc
Confidence            69999999993

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.20  E-value=0.0014  Score=55.72  Aligned_cols=80  Identities=16%  Similarity=0.214  Sum_probs=54.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~~~   87 (259)
                      -.|++++|+|+ |++|...+..+...|+ +|+.+++++++++.+. +   .+... +  +|..+ .+++.+.+.++..  
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~-v--i~~~~~~~~~~~~~~~~~~--  260 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V---FGATD-F--VNPNDHSEPISQVLSKMTN--  260 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCCE-E--ECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---hCCce-E--EeccccchhHHHHHHHHhC--
Confidence            35789999995 8999999998888999 7999998887766543 2   34322 2  24332 1223333333332  


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      +++|++|.+.|.
T Consensus       261 ~g~D~vid~~g~  272 (374)
T 1cdo_A          261 GGVDFSLECVGN  272 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999983

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.20  E-value=0.00087  Score=56.78  Aligned_cols=76  Identities=16%  Similarity=0.170  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHH-cCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g   88 (259)
                      .|++++|+||+|++|...+..+.. .|++|+.++++.++++.+.    +.|....   .|-.+  +   +.+++.+.. +
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~----~lGad~v---i~~~~--~---~~~~v~~~~~~  238 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK----SLGAHHV---IDHSK--P---LAAEVAALGLG  238 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----HTTCSEE---ECTTS--C---HHHHHHTTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH----HcCCCEE---EeCCC--C---HHHHHHHhcCC
Confidence            588999999999999988876665 5889999999877655442    2344322   23333  2   223333332 4


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      ++|++|.+.|
T Consensus       239 g~Dvvid~~g  248 (363)
T 4dvj_A          239 APAFVFSTTH  248 (363)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.18  E-value=0.0032  Score=53.55  Aligned_cols=80  Identities=16%  Similarity=0.277  Sum_probs=53.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g   88 (259)
                      .|++++|+| +|++|...+..+...| ++|+.+++++++++.+.    +.+... ++..+.++.+++.+   ++.+.. +
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~-vi~~~~~~~~~~~~---~v~~~~~g  265 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----EIGADL-TLNRRETSVEERRK---AIMDITHG  265 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----HTTCSE-EEETTTSCHHHHHH---HHHHHTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH----HcCCcE-EEeccccCcchHHH---HHHHHhCC
Confidence            578999999 8999999999888899 59999999877655433    234332 22222122344333   333333 2


Q ss_pred             -CccEEEECCCC
Q 024976           89 -KLDILVNAAAG   99 (259)
Q Consensus        89 -~id~li~~ag~   99 (259)
                       ++|++|.+.|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence             69999999983

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.17  E-value=0.003  Score=52.93  Aligned_cols=77  Identities=14%  Similarity=0.126  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHc--CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|++++|+|+ |++|...+..+...  |++|+.++++.++++.+. ++   +... +  .|..+.   .++++++.+ -.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~-v--i~~~~~---~~~~~~~~~-g~  237 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GADY-V--SEMKDA---ESLINKLTD-GL  237 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCSE-E--ECHHHH---HHHHHHHHT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCCE-E--eccccc---hHHHHHhhc-CC
Confidence            7899999999 89999999988888  999999998877665443 33   3322 1  232220   123333332 12


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      ++|++|.+.|.
T Consensus       238 g~D~vid~~g~  248 (344)
T 2h6e_A          238 GASIAIDLVGT  248 (344)
T ss_dssp             CEEEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            79999999993

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.15  E-value=0.00076  Score=56.97  Aligned_cols=83  Identities=13%  Similarity=0.175  Sum_probs=49.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|.+++|+||+|++|...+..+...|++++++.+..+..++..+.+++.|....+   |-.+ ....+ +.++.+..+++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~-~~~~~-~~~~~~~~~~~  241 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TEEE-LRRPE-MKNFFKDMPQP  241 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---EHHH-HHSGG-GGGTTSSSCCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---ecCc-chHHH-HHHHHhCCCCc
Confidence            5889999999999999999888888999877765433322222333444543322   2111 11111 11111111259


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |++|.+.|
T Consensus       242 Dvvid~~g  249 (357)
T 1zsy_A          242 RLALNCVG  249 (357)
T ss_dssp             SEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.11  E-value=0.0016  Score=55.30  Aligned_cols=80  Identities=18%  Similarity=0.252  Sum_probs=53.7

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~~~   87 (259)
                      -.|++++|+|+ |++|..++..+...|+ +|+.++++.++++.+. +   .+... +  .|..+ .+++.+.+.++..  
T Consensus       190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~-v--i~~~~~~~~~~~~~~~~~~--  259 (374)
T 2jhf_A          190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-E---VGATE-C--VNPQDYKKPIQEVLTEMSN--  259 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCce-E--ecccccchhHHHHHHHHhC--
Confidence            35789999995 8999999998888999 7999998888765542 2   34322 2  24332 1223333333222  


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      +++|++|.+.|.
T Consensus       260 ~g~D~vid~~g~  271 (374)
T 2jhf_A          260 GGVDFSFEVIGR  271 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999983

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.11  E-value=0.00085  Score=56.44  Aligned_cols=70  Identities=19%  Similarity=0.290  Sum_probs=51.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+|+ |++|...+..+...|++|+.++++.++.+.+.    +.|....+     ++.+.+.+          +
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v~-----~~~~~~~~----------~  234 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL----SMGVKHFY-----TDPKQCKE----------E  234 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH----HTTCSEEE-----SSGGGCCS----------C
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----hcCCCeec-----CCHHHHhc----------C
Confidence            35889999997 89999999988889999999998888766433    23444333     33332211          7


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|++|.+.|.
T Consensus       235 ~D~vid~~g~  244 (348)
T 3two_A          235 LDFIISTIPT  244 (348)
T ss_dssp             EEEEEECCCS
T ss_pred             CCEEEECCCc
Confidence            9999999994

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.11  E-value=0.019  Score=47.50  Aligned_cols=116  Identities=15%  Similarity=0.186  Sum_probs=70.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC--hhhHHHHHHHHHhc------CCCeEEEEcCCCCHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR--KTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~--~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      ++.+++.|+|+ |.+|..++..|+..|. +|+++|++  ++..+....++...      ..++.. ..|   .       
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~-------   73 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y-------   73 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G-------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H-------
Confidence            35678999997 9999999999999999 89999998  45555444444321      122221 112   1       


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                          +.+...|++|.++|.... +  ..+.   .+.++.|..-    .+.+.+.+.+...       .+.++++|...
T Consensus        74 ----~a~~~aDvVIiaag~p~k-p--g~~R---~dl~~~N~~i----~~~i~~~i~~~~p-------~a~vlvvsNPv  130 (315)
T 3tl2_A           74 ----ADTADSDVVVITAGIARK-P--GMSR---DDLVATNSKI----MKSITRDIAKHSP-------NAIIVVLTNPV  130 (315)
T ss_dssp             ----GGGTTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHH----HHHHHHHHHHHCT-------TCEEEECCSSH
T ss_pred             ----HHhCCCCEEEEeCCCCCC-C--CCCH---HHHHHHHHHH----HHHHHHHHHHhCC-------CeEEEECCChH
Confidence                234579999999996422 1  2333   3344555443    4444444443321       26677777644

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.11  E-value=0.0012  Score=55.84  Aligned_cols=75  Identities=21%  Similarity=0.244  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|++++|+|+ |++|...+..+...|++|+.++++.++++.+.+ +   +.... +  |..+..   ++.+++.   +++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v-~--~~~~~~---~~~~~~~---~~~  244 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M---GADHY-I--ATLEEG---DWGEKYF---DTF  244 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE-E--EGGGTS---CHHHHSC---SCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c---CCCEE-E--cCcCch---HHHHHhh---cCC
Confidence            5789999999 999999999888899999999988877655433 3   33322 2  332220   1122222   589


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |++|.+.|.
T Consensus       245 D~vid~~g~  253 (360)
T 1piw_A          245 DLIVVCASS  253 (360)
T ss_dssp             EEEEECCSC
T ss_pred             CEEEECCCC
Confidence            999999985

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.10  E-value=0.0021  Score=54.65  Aligned_cols=80  Identities=19%  Similarity=0.216  Sum_probs=53.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~~~   87 (259)
                      -.|++++|+|+ |++|...+..+...|+ +|+.+++++++++.+. +   .+....   .|.++ .+++.+.+.++..  
T Consensus       194 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~~~~v~~~~~--  263 (376)
T 1e3i_A          194 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-A---LGATDC---LNPRELDKPVQDVITELTA--  263 (376)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCcEE---EccccccchHHHHHHHHhC--
Confidence            35789999996 8999999998888999 7999998887765442 2   343222   23332 1223333333322  


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      +++|++|.+.|.
T Consensus       264 ~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 GGVDYSLDCAGT  275 (376)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            479999999983

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.10  E-value=0.00092  Score=56.45  Aligned_cols=75  Identities=13%  Similarity=0.120  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|.+++|+|+ |++|...+..+...|++|++++++.++++...++   .+....   .|..+.+.++       +..+++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~---lGa~~v---i~~~~~~~~~-------~~~~g~  245 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD---LGADDY---VIGSDQAKMS-------ELADSL  245 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT---SCCSCE---EETTCHHHHH-------HSTTTE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH---cCCcee---eccccHHHHH-------HhcCCC
Confidence            6889999995 8999999998888999999999987765554323   343322   2344443322       222579


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |++|.+.|.
T Consensus       246 D~vid~~g~  254 (357)
T 2cf5_A          246 DYVIDTVPV  254 (357)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEECCCC
Confidence            999999984

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.09  E-value=0.029  Score=46.94  Aligned_cols=108  Identities=12%  Similarity=0.174  Sum_probs=66.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-------eEEEEeCChh--hHHHHHHHHHhcCCC--eEEEEcCCCCHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKT--VLRSAVAALHSLGIP--AIGLEGDVRKREDAV   77 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-------~vv~~~r~~~--~~~~~~~~~~~~~~~--v~~~~~Dl~~~~~~~   77 (259)
                      .+..-+|.|+||+|+||..++..|++...       +++++|.++.  .++...-++......  ...+..  ++..   
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~---   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR---   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH---
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH---
Confidence            35566999999999999999999987542       6889998753  345555556543221  222222  1221   


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhc
Q 024976           78 RVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG  138 (259)
Q Consensus        78 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  138 (259)
                             +.+...|++|-.||.... +  .++.+|   .++.|..    +++.+.+.+.+.
T Consensus        96 -------~a~~~advVvi~aG~prk-p--GmtR~D---Ll~~Na~----I~~~~~~~i~~~  139 (345)
T 4h7p_A           96 -------VAFDGVAIAIMCGAFPRK-A--GMERKD---LLEMNAR----IFKEQGEAIAAV  139 (345)
T ss_dssp             -------HHTTTCSEEEECCCCCCC-T--TCCHHH---HHHHHHH----HHHHHHHHHHHH
T ss_pred             -------HHhCCCCEEEECCCCCCC-C--CCCHHH---HHHHhHH----HHHHHHHHHHhh
Confidence                   223578999999996432 1  245444   3555543    455566666553

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.05  E-value=0.0011  Score=56.29  Aligned_cols=80  Identities=18%  Similarity=0.216  Sum_probs=53.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~~~   87 (259)
                      -.|++++|+|+ |++|...+..+...|+ +|+.++++.++++.+. ++   +... +  .|..+ .+++.+.+.++..  
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~-v--i~~~~~~~~~~~~v~~~~~--  258 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GATE-C--INPQDFSKPIQEVLIEMTD--  258 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCce-E--eccccccccHHHHHHHHhC--
Confidence            35789999996 8999999998888999 7999998888765543 33   3322 2  23332 1223333333222  


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      +++|++|.+.|.
T Consensus       259 ~g~D~vid~~g~  270 (373)
T 2fzw_A          259 GGVDYSFECIGN  270 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999983

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.05  E-value=0.00058  Score=55.71  Aligned_cols=69  Identities=16%  Similarity=0.237  Sum_probs=51.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++|+++|+|+ ||.|++++..|.+.|+ +|.++.|+.++.+++.+.+       ..+     ..+++.       + .
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~-------~~~-----~~~~l~-------~-l  177 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF-------KVI-----SYDELS-------N-L  177 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS-------EEE-----EHHHHT-------T-C
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc-------Ccc-----cHHHHH-------h-c
Confidence            578999999997 6999999999999999 7999999988766654432       111     122221       2 2


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                       ..|+|||+...
T Consensus       178 -~~DivInaTp~  188 (282)
T 3fbt_A          178 -KGDVIINCTPK  188 (282)
T ss_dssp             -CCSEEEECSST
T ss_pred             -cCCEEEECCcc
Confidence             68999999864

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=97.03  E-value=0.0031  Score=56.46  Aligned_cols=89  Identities=20%  Similarity=0.206  Sum_probs=58.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh-------------------hhHHHHHHHHHhcCCCeE--EE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIPAI--GL   66 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~-------------------~~~~~~~~~~~~~~~~v~--~~   66 (259)
                      .+++++|+|.|++ |+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+...++.+.  .+
T Consensus       323 kL~~arVLIVGaG-GLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            3678899999875 999999999999998 588998753                   456667777776665544  44


Q ss_pred             EcCC-------CCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           67 EGDV-------RKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        67 ~~Dl-------~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      ..++       ++++...--.+.+.+.+...|+||.+..
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence            4443       2322111111222223346899998876

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.01  E-value=0.02  Score=46.52  Aligned_cols=42  Identities=21%  Similarity=0.255  Sum_probs=36.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA   55 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~   55 (259)
                      +++.|.|+ |.+|..++..|++.|++|++++++++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            57888876 7899999999999999999999998887776654

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.01  E-value=0.0098  Score=49.56  Aligned_cols=120  Identities=8%  Similarity=0.042  Sum_probs=75.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ....+++.|+|+ |.+|..++..|+.+|.  +|+++|.+.++++....++....   ........+  |.+         
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~---------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS---------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH---------
Confidence            356779999997 8999999999999987  79999999888887777776431   122222221  221         


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                        .+...|++|.++|.... +  .++.   .+.++.|.-=    ++.+.+.+.+...       .+.++++|....
T Consensus        84 --~~~~aDiVvi~aG~~~k-p--G~tR---~dL~~~N~~I----~~~i~~~i~~~~p-------~a~vlvvtNPvd  140 (331)
T 4aj2_A           84 --VTANSKLVIITAGARQQ-E--GESR---LNLVQRNVNI----FKFIIPNVVKYSP-------QCKLLIVSNPVD  140 (331)
T ss_dssp             --GGTTEEEEEECCSCCCC-T--TCCG---GGGHHHHHHH----HHHHHHHHHHHCT-------TCEEEECSSSHH
T ss_pred             --HhCCCCEEEEccCCCCC-C--CccH---HHHHHHHHHH----HHHHHHHHHHHCC-------CeEEEEecChHH
Confidence              23478999999996422 1  2232   2345555543    4444444443321       267777776543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.00  E-value=0.0014  Score=50.79  Aligned_cols=43  Identities=26%  Similarity=0.397  Sum_probs=37.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL   56 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~   56 (259)
                      +++|+||+|.+|.++++.|++.|++|++++|+.++.+...+.+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999987776655543

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.96  E-value=0.00086  Score=55.75  Aligned_cols=73  Identities=18%  Similarity=0.204  Sum_probs=50.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      |+ ++|+|++|++|...+..+...|++|+.++++.++.+.+.+ +   |.+..+-.-|...       ++++.  .+++|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~vi~~~~~~~-------~~~~~--~~~~d  213 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L---GANRILSRDEFAE-------SRPLE--KQLWA  213 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H---TCSEEEEGGGSSC-------CCSSC--CCCEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEEEecCCHHH-------HHhhc--CCCcc
Confidence            45 9999999999999999999999999999998887655433 3   4433332222211       11111  14799


Q ss_pred             EEEECCC
Q 024976           92 ILVNAAA   98 (259)
Q Consensus        92 ~li~~ag   98 (259)
                      ++|.+.|
T Consensus       214 ~v~d~~g  220 (324)
T 3nx4_A          214 GAIDTVG  220 (324)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999887

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.96  E-value=0.0058  Score=52.21  Aligned_cols=44  Identities=11%  Similarity=0.192  Sum_probs=38.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA   54 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~   54 (259)
                      +.+.+++|+|+ |.+|..+++.+...|++|++++++..+++...+
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            57889999999 699999999999999999999999887665543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.94  E-value=0.0016  Score=55.47  Aligned_cols=80  Identities=14%  Similarity=0.199  Sum_probs=53.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~~~   87 (259)
                      -.|.+++|+|+ |++|...+..+...|+ +|+.++++.++++.+ +   +.|....   .|..+ .+++.+.+.++..  
T Consensus       192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~~v---i~~~~~~~~~~~~i~~~~~--  261 (378)
T 3uko_A          192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-K---KFGVNEF---VNPKDHDKPIQEVIVDLTD--  261 (378)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-H---TTTCCEE---ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H---HcCCcEE---EccccCchhHHHHHHHhcC--
Confidence            35789999998 8999999998888999 799999888876533 2   3344322   23331 1223333332221  


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      +++|++|.+.|.
T Consensus       262 gg~D~vid~~g~  273 (378)
T 3uko_A          262 GGVDYSFECIGN  273 (378)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999993

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.94  E-value=0.0022  Score=54.69  Aligned_cols=44  Identities=14%  Similarity=0.114  Sum_probs=38.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV   53 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~   53 (259)
                      .+.+++++|+|+ |++|+.+++.+...|++|++++++..+++...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            568999999996 79999999999999999999999887765543

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.93  E-value=0.0026  Score=53.92  Aligned_cols=80  Identities=24%  Similarity=0.325  Sum_probs=52.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~~~   87 (259)
                      -.|++++|+|+ |++|...+..+...|+ +|+.++++.++++.+. +   .+... +  .|..+ .+++.+.+.++..  
T Consensus       190 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~-v--i~~~~~~~~~~~~i~~~t~--  259 (373)
T 1p0f_A          190 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E---LGATE-C--LNPKDYDKPIYEVICEKTN--  259 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H---TTCSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H---cCCcE-E--EecccccchHHHHHHHHhC--
Confidence            35789999995 8999999988888899 7999998887765443 2   34332 2  23332 1123333332221  


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      +++|++|.+.|.
T Consensus       260 gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 GGVDYAVECAGR  271 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999983

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.93  E-value=0.0038  Score=54.43  Aligned_cols=79  Identities=15%  Similarity=0.151  Sum_probs=55.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++++|+++|.|. |+.|+++|+.|.++|++|.+.|++........+.+.+.+.  .+....-.+     +       .+
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi--~~~~g~~~~-----~-------~~   69 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGI--KVVCGSHPL-----E-------LL   69 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTC--EEEESCCCG-----G-------GG
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCC--EEEECCChH-----H-------hh
Confidence            4578999999999 7899999999999999999999875322233445555553  333322211     0       11


Q ss_pred             CC-ccEEEECCCCCC
Q 024976           88 GK-LDILVNAAAGNF  101 (259)
Q Consensus        88 g~-id~li~~ag~~~  101 (259)
                      .. +|.||.++|+..
T Consensus        70 ~~~~d~vv~spgi~~   84 (451)
T 3lk7_A           70 DEDFCYMIKNPGIPY   84 (451)
T ss_dssp             GSCEEEEEECTTSCT
T ss_pred             cCCCCEEEECCcCCC
Confidence            24 899999999754

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.93  E-value=0.0017  Score=55.09  Aligned_cols=76  Identities=24%  Similarity=0.311  Sum_probs=51.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH---H
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN---H   86 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~---~   86 (259)
                      .|++++|+|+ |++|...+..+...|+ +|++++++.++.+ ..+++   |...   ..|.++.+-    .+.+.+   .
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l---Ga~~---vi~~~~~~~----~~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEV---GATA---TVDPSAGDV----VEAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHH---TCSE---EECTTSSCH----HHHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHc---CCCE---EECCCCcCH----HHHHHhhhhc
Confidence            5789999998 8999999988888999 7888888877654 33333   3322   224444322    222232   2


Q ss_pred             -cCCccEEEECCC
Q 024976           87 -FGKLDILVNAAA   98 (259)
Q Consensus        87 -~g~id~li~~ag   98 (259)
                       .+++|++|.+.|
T Consensus       250 ~~gg~Dvvid~~G  262 (370)
T 4ej6_A          250 VPGGVDVVIECAG  262 (370)
T ss_dssp             STTCEEEEEECSC
T ss_pred             cCCCCCEEEECCC
Confidence             247999999998

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.93  E-value=0.0015  Score=55.09  Aligned_cols=75  Identities=17%  Similarity=0.328  Sum_probs=51.1

Q ss_pred             CCCcEEEEeCCccchHHHH-HHHH-HHcCCe-EEEEeCChh---hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEI-SLQL-GKHGAA-IAIMGRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~-a~~l-~~~G~~-vv~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +.+++++|+|+ |++|... +..+ ...|++ |+.++++.+   +++.+ ++   .|.  ..+  |..+. ++.+ +.++
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~---lGa--~~v--~~~~~-~~~~-i~~~  239 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EE---LDA--TYV--DSRQT-PVED-VPDV  239 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HH---TTC--EEE--ETTTS-CGGG-HHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HH---cCC--ccc--CCCcc-CHHH-HHHh
Confidence            44589999999 9999999 7766 567997 999998876   65543 23   343  222  44432 2223 3333


Q ss_pred             HHHcCCccEEEECCC
Q 024976           84 INHFGKLDILVNAAA   98 (259)
Q Consensus        84 ~~~~g~id~li~~ag   98 (259)
                         .+++|++|.+.|
T Consensus       240 ---~gg~Dvvid~~g  251 (357)
T 2b5w_A          240 ---YEQMDFIYEATG  251 (357)
T ss_dssp             ---SCCEEEEEECSC
T ss_pred             ---CCCCCEEEECCC
Confidence               247999999998

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.92  E-value=0.00092  Score=53.67  Aligned_cols=43  Identities=16%  Similarity=0.200  Sum_probs=36.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAV   53 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~   53 (259)
                      .+++ +++|.|+ ||.|++++..|.+.|+ +|.+++|+.++.+++.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4577 8999987 7999999999999999 7999999987655543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.91  E-value=0.0024  Score=55.04  Aligned_cols=61  Identities=11%  Similarity=0.128  Sum_probs=46.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRV   79 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~   79 (259)
                      +..++|.|. |.+|+.+++.|.+.|..|++++++++..+.+.+    .  .+.++.+|.++++.++++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~--g~~vi~GDat~~~~L~~a   64 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F--GMKVFYGDATRMDLLESA   64 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T--TCCCEESCTTCHHHHHHT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C--CCeEEEcCCCCHHHHHhc
Confidence            346889987 689999999999999999999999887665432    2  245667777777655443

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.91  E-value=0.026  Score=46.20  Aligned_cols=114  Identities=10%  Similarity=0.048  Sum_probs=70.1

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHh----cCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.|+|+ |.+|.+++..|+..|.  +|+++|++++.++....++..    ......+...  +|.+           .+
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH-----------Hh
Confidence            6889999 9999999999999998  899999998876643333332    1222222211  1211           22


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ..-|++|.++|....   ...+..+   .+..|    ...++.+.+.+.+...       .+.++++|...
T Consensus        68 ~~aDiVViaag~~~k---pG~~R~d---l~~~N----~~i~~~i~~~i~~~~p-------~a~iivvsNPv  121 (294)
T 1oju_A           68 KGSEIIVVTAGLARK---PGMTRLD---LAHKN----AGIIKDIAKKIVENAP-------ESKILVVTNPM  121 (294)
T ss_dssp             TTCSEEEECCCCCCC---SSCCHHH---HHHHH----HHHHHHHHHHHHTTST-------TCEEEECSSSH
T ss_pred             CCCCEEEECCCCCCC---CCCcHHH---HHHHH----HHHHHHHHHHHHhhCC-------CeEEEEeCCcc
Confidence            368999999996421   1233333   34444    3455566666665432       36777777654

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.90  E-value=0.0023  Score=54.09  Aligned_cols=47  Identities=21%  Similarity=0.304  Sum_probs=41.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL   56 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~   56 (259)
                      +++||+++|+|. |.+|+.+++.|.+.|++|++.|++.+++++..+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999997 68999999999999999999999988777666654

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.87  E-value=0.0026  Score=54.62  Aligned_cols=78  Identities=22%  Similarity=0.277  Sum_probs=53.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-   87 (259)
                      -.|.+++|+|+ |++|...+..+...|+ +|+.++++.++++.+ +++   |... +  .|-.+.+    +.+++.+.. 
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~-v--i~~~~~~----~~~~i~~~t~  279 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GADH-V--IDPTKEN----FVEAVLDYTN  279 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSE-E--ECTTTSC----HHHHHHHHTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCE-E--EcCCCCC----HHHHHHHHhC
Confidence            46889999998 8999999988888999 799999887765543 333   4322 2  2443332    223333333 


Q ss_pred             C-CccEEEECCCC
Q 024976           88 G-KLDILVNAAAG   99 (259)
Q Consensus        88 g-~id~li~~ag~   99 (259)
                      + ++|++|.+.|.
T Consensus       280 g~g~D~vid~~g~  292 (404)
T 3ip1_A          280 GLGAKLFLEATGV  292 (404)
T ss_dssp             TCCCSEEEECSSC
T ss_pred             CCCCCEEEECCCC
Confidence            2 69999999993

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.85  E-value=0.0017  Score=53.99  Aligned_cols=74  Identities=15%  Similarity=0.292  Sum_probs=50.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|++++|+||+|++|...+..+...|++|+.+.++. + .+..++   .+... ++  |..+.+.+.+       ...+
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~---lGa~~-~i--~~~~~~~~~~-------~~~g  215 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKA---LGAEQ-CI--NYHEEDFLLA-------ISTP  215 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHH---HTCSE-EE--ETTTSCHHHH-------CCSC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHH---cCCCE-EE--eCCCcchhhh-------hccC
Confidence            3688999999999999999999999999998887543 3 233333   34432 22  3333321111       1247


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|.+.|
T Consensus       216 ~D~v~d~~g  224 (321)
T 3tqh_A          216 VDAVIDLVG  224 (321)
T ss_dssp             EEEEEESSC
T ss_pred             CCEEEECCC
Confidence            999999998

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.84  E-value=0.0055  Score=51.87  Aligned_cols=77  Identities=16%  Similarity=0.210  Sum_probs=51.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-   87 (259)
                      -.|++++|+|+ |++|...+..+...|+ +|+.++++.++++.+ +++   +... ++  |..+.+    +.+++.+.. 
T Consensus       189 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-vi--~~~~~~----~~~~~~~~~~  256 (371)
T 1f8f_A          189 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATH-VI--NSKTQD----PVAAIKEITD  256 (371)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSE-EE--ETTTSC----HHHHHHHHTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCCE-Ee--cCCccC----HHHHHHHhcC
Confidence            35789999995 8999999988888899 588999887765544 333   3322 22  333322    122222222 


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      +++|++|.+.|
T Consensus       257 gg~D~vid~~g  267 (371)
T 1f8f_A          257 GGVNFALESTG  267 (371)
T ss_dssp             SCEEEEEECSC
T ss_pred             CCCcEEEECCC
Confidence            37999999998

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.82  E-value=0.0063  Score=50.62  Aligned_cols=118  Identities=14%  Similarity=0.116  Sum_probs=70.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhc----CCCeEEE-EcCCCCHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGL-EGDVRKREDAVRVVEST   83 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~-~~Dl~~~~~~~~~~~~~   83 (259)
                      ++.+++.|+|+ |.+|.+++..|+..|. +|+++|+++++++....++...    +....+. ..|   .          
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d---~----------   70 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND---Y----------   70 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS---G----------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC---H----------
Confidence            35678999998 9999999999999998 9999999988776555455432    1122222 122   1          


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                       +.+..-|++|.++|.....   ..+.   .+.+..|.    ..++.+.+.+.+...       .+.++++|....
T Consensus        71 -~a~~~aDiVIiaag~p~k~---G~~R---~dl~~~N~----~i~~~i~~~i~~~~p-------~a~iivvtNPvd  128 (324)
T 3gvi_A           71 -AAIEGADVVIVTAGVPRKP---GMSR---DDLLGINL----KVMEQVGAGIKKYAP-------EAFVICITNPLD  128 (324)
T ss_dssp             -GGGTTCSEEEECCSCCCC-----------CHHHHHHH----HHHHHHHHHHHHHCT-------TCEEEECCSSHH
T ss_pred             -HHHCCCCEEEEccCcCCCC---CCCH---HHHHHhhH----HHHHHHHHHHHHHCC-------CeEEEecCCCcH
Confidence             1234689999999963211   1122   22344444    344555555554321       266777776543

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.81  E-value=0.066  Score=44.35  Aligned_cols=118  Identities=13%  Similarity=0.121  Sum_probs=72.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +.+++.|+|+ |.+|.+++..|+..|. +|+++|+++++++....++.+.    +....+...+  +.           +
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~-----------~   69 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY-----------K   69 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH-----------H
Confidence            3467889995 8999999999999988 8999999988777666666532    1122222111  11           1


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      .+..-|++|..+|....   ...+..+   .+..|..    .++.+.+.+.+...       .+.+++++....
T Consensus        70 a~~~aDvVIi~ag~p~k---~G~~R~d---l~~~N~~----i~~~i~~~i~~~~p-------~a~vivvtNPvd  126 (321)
T 3p7m_A           70 DLENSDVVIVTAGVPRK---PGMSRDD---LLGINIK----VMQTVGEGIKHNCP-------NAFVICITNPLD  126 (321)
T ss_dssp             GGTTCSEEEECCSCCCC---TTCCHHH---HHHHHHH----HHHHHHHHHHHHCT-------TCEEEECCSSHH
T ss_pred             HHCCCCEEEEcCCcCCC---CCCCHHH---HHHHhHH----HHHHHHHHHHHHCC-------CcEEEEecCchH
Confidence            23468999999996422   1233333   3444443    44445555544321       266777765543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.78  E-value=0.0061  Score=49.99  Aligned_cols=85  Identities=11%  Similarity=0.072  Sum_probs=59.0

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHH-------HHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-------LHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .+++.|.| .|.+|..+++.|++.|++|++++|++++.+.+.+.       +.+.-. ..++..-+.+...++++++++.
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~   92 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELA   92 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHH
Confidence            35788887 57999999999999999999999998876665432       111111 3344445666777888887777


Q ss_pred             HHcCCccEEEECCC
Q 024976           85 NHFGKLDILVNAAA   98 (259)
Q Consensus        85 ~~~g~id~li~~ag   98 (259)
                      ....+=.++|++..
T Consensus        93 ~~l~~g~ivv~~st  106 (296)
T 3qha_A           93 GHAKPGTVIAIHST  106 (296)
T ss_dssp             TTCCTTCEEEECSC
T ss_pred             HhcCCCCEEEEeCC
Confidence            65544467777665

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.75  E-value=0.0049  Score=55.15  Aligned_cols=61  Identities=26%  Similarity=0.298  Sum_probs=45.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC-------------------hhhHHHHHHHHHhcCCCeE--EE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLGIPAI--GL   66 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~-------------------~~~~~~~~~~~~~~~~~v~--~~   66 (259)
                      .+++++|+|.|++ |+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.++..++.+.  .+
T Consensus       324 kL~~~kVLIVGaG-GLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECCS-HHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            4677899999875 999999999999998 58899764                   2466777777776555444  44


Q ss_pred             EcCC
Q 024976           67 EGDV   70 (259)
Q Consensus        67 ~~Dl   70 (259)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            4443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.73  E-value=0.061  Score=44.37  Aligned_cols=116  Identities=11%  Similarity=0.079  Sum_probs=68.9

Q ss_pred             EEEEeCCccchHHHHHHHHHHc-C--CeEEEEeCChhhHHHHHHHHHhcCCCeEEEEc-CCCCHHHHHHHHHHHHHHcCC
Q 024976           14 VALLTGGGSGIGFEISLQLGKH-G--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG-DVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~-G--~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~-Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++.|+||+|.+|.+++..|+.. +  .+++++|.++ ..+....++......+.+... .-.+.+           .+..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~-----------~~~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP-----------ALEG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHH-----------HHTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHH-----------HhCC
Confidence            6889999999999999999886 5  3699999987 455555556554332332211 111222           2346


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      .|++|..+|....   ..++.   .+.++.|..-...+.    +.+.+...       .+.++++|...
T Consensus        70 aDivii~ag~~rk---pG~~R---~dll~~N~~I~~~i~----~~i~~~~p-------~a~vlvvtNPv  121 (312)
T 3hhp_A           70 ADVVLISAGVARK---PGMDR---SDLFNVNAGIVKNLV----QQVAKTCP-------KACIGIITNPV  121 (312)
T ss_dssp             CSEEEECCSCSCC---TTCCH---HHHHHHHHHHHHHHH----HHHHHHCT-------TSEEEECSSCH
T ss_pred             CCEEEEeCCCCCC---CCCCH---HHHHHHHHHHHHHHH----HHHHHHCC-------CcEEEEecCcc
Confidence            8999999996421   12333   344555654444444    44433321       26677776543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.73  E-value=0.0077  Score=49.05  Aligned_cols=83  Identities=13%  Similarity=0.104  Sum_probs=53.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHH-H-----Hh--cCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-L-----HS--LGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~-~-----~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +++.|.|++|.+|.++++.|.+.|++|++++|+.+..+.+.+. +     .+  ...++.++.+   ....+.++++++.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av---~~~~~~~v~~~l~   88 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLAL---PDNIIEKVAEDIV   88 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcC---CchHHHHHHHHHH
Confidence            4799999999999999999999999999999998776655431 0     00  0122223221   2344677777665


Q ss_pred             HHcCCccEEEECCC
Q 024976           85 NHFGKLDILVNAAA   98 (259)
Q Consensus        85 ~~~g~id~li~~ag   98 (259)
                      ....+=.+++++..
T Consensus        89 ~~l~~~~ivv~~s~  102 (286)
T 3c24_A           89 PRVRPGTIVLILDA  102 (286)
T ss_dssp             GGSCTTCEEEESCS
T ss_pred             HhCCCCCEEEECCC
Confidence            44332235565543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.71  E-value=0.078  Score=43.84  Aligned_cols=116  Identities=13%  Similarity=0.158  Sum_probs=70.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +..++.|+|+ |.+|..++..|+..|.  +|+++|.++++++....++...    +.++.+.. |  +           .
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~-----------~   69 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E-----------Y   69 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C-----------H
Confidence            4468999998 9999999999999884  7999999987766544444321    12333332 2  1           1


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      +.+...|++|..+|.....   ..+..+   .+..|.    -.++.+.+.+.+...       .+.++++|...
T Consensus        70 ~a~~~aDvVvi~ag~~~~~---g~~r~d---l~~~n~----~i~~~i~~~i~~~~p-------~a~viv~tNPv  126 (317)
T 3d0o_A           70 SDCHDADLVVICAGAAQKP---GETRLD---LVSKNL----KIFKSIVGEVMASKF-------DGIFLVATNPV  126 (317)
T ss_dssp             GGGTTCSEEEECCCCCCCT---TCCHHH---HHHHHH----HHHHHHHHHHHHTTC-------CSEEEECSSSH
T ss_pred             HHhCCCCEEEECCCCCCCC---CCcHHH---HHHHHH----HHHHHHHHHHHHhCC-------CcEEEEecCcH
Confidence            2234789999999964221   223222   233333    344555555554422       26677766544

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.69  E-value=0.0087  Score=51.20  Aligned_cols=77  Identities=16%  Similarity=0.175  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g   88 (259)
                      .|++++|+|+ |++|...+..+...|+ +|+.++++.++++.+    ++.+.  ..+  |..+.+.+.   +++.+.. +
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa--~~i--~~~~~~~~~---~~~~~~~~g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----SDAGF--ETI--DLRNSAPLR---DQIDQILGK  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HTTTC--EEE--ETTSSSCHH---HHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCC--cEE--cCCCcchHH---HHHHHHhCC
Confidence            5789999996 9999999988888899 899999987765443    23354  233  444322101   1122222 3


Q ss_pred             -CccEEEECCCC
Q 024976           89 -KLDILVNAAAG   99 (259)
Q Consensus        89 -~id~li~~ag~   99 (259)
                       ++|++|.+.|.
T Consensus       253 ~g~Dvvid~~g~  264 (398)
T 2dph_A          253 PEVDCGVDAVGF  264 (398)
T ss_dssp             SCEEEEEECSCT
T ss_pred             CCCCEEEECCCC
Confidence             69999999984

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.66  E-value=0.11  Score=42.54  Aligned_cols=114  Identities=10%  Similarity=0.043  Sum_probs=72.5

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.|+|+ |+||..++..|+.++.  +++++|.+++..+....++...    +........+  |.+           .+
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~-----------~~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG-----------GG
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH-----------Hh
Confidence            5788895 9999999999998875  6999999987777666666542    2233333221  221           22


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ..-|++|-.||.....   .++.++   .++.|.    ..++-+.+.+.+...       .+.++.+|...
T Consensus        68 ~~aDvVvitAG~prkp---GmtR~d---Ll~~Na----~I~~~i~~~i~~~~p-------~aivlvvsNPv  121 (294)
T 2x0j_A           68 KGSEIIVVTAGLARKP---GMTRLD---LAHKNA----GIIKDIAKKIVENAP-------ESKILVVTNPM  121 (294)
T ss_dssp             TTCSEEEECCCCCCCS---SSCHHH---HHHHHH----HHHHHHHHHHHTTST-------TCEEEECSSSH
T ss_pred             CCCCEEEEecCCCCCC---CCchHH---HHHHHH----HHHHHHHHHHHhcCC-------ceEEEEecCcc
Confidence            4689999999964321   244444   345554    355666666665432       25666666654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.65  E-value=0.0049  Score=52.73  Aligned_cols=77  Identities=16%  Similarity=0.180  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g   88 (259)
                      .|++++|.|+ |++|...+..+...|+ +|+.++++.++++.+ +   +.|..  .  +|.++.+.+.+   ++.+.. +
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~--~--i~~~~~~~~~~---~v~~~t~g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-K---AQGFE--I--ADLSLDTPLHE---QIAALLGE  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-H---HTTCE--E--EETTSSSCHHH---HHHHHHSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-H---HcCCc--E--EccCCcchHHH---HHHHHhCC
Confidence            5789999995 9999999988888899 688889887765544 2   33442  2  34443222222   222222 2


Q ss_pred             -CccEEEECCCC
Q 024976           89 -KLDILVNAAAG   99 (259)
Q Consensus        89 -~id~li~~ag~   99 (259)
                       ++|++|.+.|.
T Consensus       253 ~g~Dvvid~~G~  264 (398)
T 1kol_A          253 PEVDCAVDAVGF  264 (398)
T ss_dssp             SCEEEEEECCCT
T ss_pred             CCCCEEEECCCC
Confidence             69999999995

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.65  E-value=0.0032  Score=53.07  Aligned_cols=81  Identities=20%  Similarity=0.240  Sum_probs=57.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh-------------------hhHHHHHHHHHhcCC--CeEEE
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGI--PAIGL   66 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~~   66 (259)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+...++  ++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            356789999987 6999999999999998 588998752                   345556666665544  45566


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        67 ~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      ..+++....+.       + +...|+||.+..
T Consensus       194 ~~~i~~~~~~~-------~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          194 ALNINDYTDLH-------K-VPEADIWVVSAD  217 (353)
T ss_dssp             ECCCCSGGGGG-------G-SCCCSEEEECCC
T ss_pred             ecccCchhhhh-------H-hccCCEEEEecC
Confidence            66776554222       1 457888888654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.63  E-value=0.01  Score=49.60  Aligned_cols=77  Identities=16%  Similarity=0.113  Sum_probs=51.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-   87 (259)
                      -.|++++|+|+ |++|...+..+... |++|+.++++.++++.+.    +.|....+   |-.+ +    +.+++.+.. 
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~----~lGa~~~i---~~~~-~----~~~~v~~~t~  236 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR----EVGADAAV---KSGA-G----AADAIRELTG  236 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH----HTTCSEEE---ECST-T----HHHHHHHHHG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCCEEE---cCCC-c----HHHHHHHHhC
Confidence            35789999998 89999988877777 778999999887655432    33443322   2222 2    222233322 


Q ss_pred             C-CccEEEECCCC
Q 024976           88 G-KLDILVNAAAG   99 (259)
Q Consensus        88 g-~id~li~~ag~   99 (259)
                      + ++|+++.+.|.
T Consensus       237 g~g~d~v~d~~G~  249 (345)
T 3jv7_A          237 GQGATAVFDFVGA  249 (345)
T ss_dssp             GGCEEEEEESSCC
T ss_pred             CCCCeEEEECCCC
Confidence            2 79999999993

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.62  E-value=0.0037  Score=54.66  Aligned_cols=74  Identities=15%  Similarity=0.156  Sum_probs=59.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      .+++|.|+ |.+|+.+|+.|.++|++|++++++++.++.+.+.+     ++..+.+|-++++.++++=      ...-|.
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Ag------i~~ad~   71 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAG------AQDADM   71 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHT------TTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcC------CCcCCE
Confidence            46888887 58999999999999999999999998877766554     4778999999998877651      136788


Q ss_pred             EEECCC
Q 024976           93 LVNAAA   98 (259)
Q Consensus        93 li~~ag   98 (259)
                      +|...+
T Consensus        72 ~ia~t~   77 (461)
T 4g65_A           72 LVAVTN   77 (461)
T ss_dssp             EEECCS
T ss_pred             EEEEcC
Confidence            887654

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.60  E-value=0.068  Score=44.41  Aligned_cols=117  Identities=13%  Similarity=0.154  Sum_probs=71.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc---CCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +..++.|+|+ |.+|..++..|+..+.  +|+++|.+.++++....++...   ..++.+.. |  +.           +
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~-----------~   72 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EY-----------S   72 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CH-----------H
Confidence            3468999999 9999999999998886  7999999988887766666543   12333332 2  21           1


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      .+...|++|..+|.....   ..+..+   .+..|+.    .++.+.+.+.+...       .+.++++|....
T Consensus        73 a~~~aDvVii~ag~~~k~---g~~R~d---l~~~n~~----i~~~i~~~i~~~~p-------~a~iiv~tNPv~  129 (326)
T 2zqz_A           73 DAKDADLVVITAGAPQKP---GETRLD---LVNKNLK----ILKSIVDPIVDSGF-------NGIFLVAANPVD  129 (326)
T ss_dssp             GGGGCSEEEECCCCC--------CHHH---HHHHHHH----HHHHHHHHHHHHTC-------CSEEEECSSSHH
T ss_pred             HhCCCCEEEEcCCCCCCC---CCCHHH---HHHHHHH----HHHHHHHHHHHHCC-------CeEEEEeCCcHH
Confidence            233689999999963211   123222   3333433    44455555544321       277887766554

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.57  E-value=0.0063  Score=51.13  Aligned_cols=78  Identities=22%  Similarity=0.248  Sum_probs=52.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-   87 (259)
                      -.|.+++|+|+ |++|...+..+...|+ +|+.++++.++++.. +++   +... +  .|..+.+    +.+++.+.. 
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~-v--i~~~~~~----~~~~v~~~t~  232 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY---GATD-I--INYKNGD----IVEQILKATD  232 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH---TCCE-E--ECGGGSC----HHHHHHHHTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---CCce-E--EcCCCcC----HHHHHHHHcC
Confidence            35789999985 8999999988888999 799999887765433 333   3322 2  2333322    223333333 


Q ss_pred             C-CccEEEECCCC
Q 024976           88 G-KLDILVNAAAG   99 (259)
Q Consensus        88 g-~id~li~~ag~   99 (259)
                      + ++|++|.+.|.
T Consensus       233 g~g~D~v~d~~g~  245 (352)
T 3fpc_A          233 GKGVDKVVIAGGD  245 (352)
T ss_dssp             TCCEEEEEECSSC
T ss_pred             CCCCCEEEECCCC
Confidence            2 69999999984

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.57  E-value=0.055  Score=44.95  Aligned_cols=117  Identities=9%  Similarity=-0.010  Sum_probs=72.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc---CCCeEEE-EcCCCCHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGL-EGDVRKREDAVRVVESTI   84 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~---~~~v~~~-~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..+++.|+|+ |.+|..++..|+..|.  +|+++|.+++.++....++...   .....+. ..|..             
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-------------   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-------------   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------------
Confidence            4578999999 9999999999999997  7999999988777766666532   1112222 23332             


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                       .+...|++|-++|.....   ..+.   .+.+..|.    .+.+.+.+.+.+...       .+.++++|....
T Consensus        86 -~~~daDiVIitaG~p~kp---G~tR---~dll~~N~----~I~k~i~~~I~k~~P-------~a~ilvvtNPvd  142 (330)
T 3ldh_A           86 -VSAGSKLVVITAGARQQE---GESR---LNLVQRNV----NIFKFIIPNIVKHSP-------DCLKELHPELGT  142 (330)
T ss_dssp             -SCSSCSEEEECCSCCCCS---SCCT---TGGGHHHH----HHHHHHHHHHHHHCT-------TCEEEECSSSHH
T ss_pred             -HhCCCCEEEEeCCCCCCC---CCCH---HHHHHhhH----HHHHHHHHHHHhhCC-------CceEEeCCCccH
Confidence             124689999999964321   1222   22333443    334444555444321       266777776543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.56  E-value=0.078  Score=43.76  Aligned_cols=114  Identities=10%  Similarity=0.154  Sum_probs=69.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.|+|+ |.+|..++..|+..|.  +|+++|+++++++....++...    ..++.+...|.  .           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HHh
Confidence            5889997 9999999999999987  7999999988777655555432    22233322221  1           233


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ..-|++|.++|.... +  ..+.   .+.++.|+    ..++.+.+.+.+...       .+.++++|...
T Consensus        68 ~~aDvVii~ag~~~k-p--G~~R---~dl~~~N~----~i~~~i~~~i~~~~p-------~a~vivvtNPv  121 (314)
T 3nep_X           68 EDSDVCIITAGLPRS-P--GMSR---DDLLAKNT----EIVGGVTEQFVEGSP-------DSTIIVVANPL  121 (314)
T ss_dssp             TTCSEEEECCCC----------C---HHHHHHHH----HHHHHHHHHHHTTCT-------TCEEEECCSSH
T ss_pred             CCCCEEEECCCCCCC-C--CCCH---HHHHHhhH----HHHHHHHHHHHHhCC-------CcEEEecCCch
Confidence            478999999996321 1  1222   23344443    345555666655422       36777777654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.54  E-value=0.068  Score=44.24  Aligned_cols=116  Identities=14%  Similarity=0.198  Sum_probs=71.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..++.|+|+ |.+|..++..|+..+.  +++++|.+.++++....++....   .++.+.. |  +           .+.
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~-----------~~a   69 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E-----------YSD   69 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C-----------GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C-----------HHH
Confidence            358999999 9999999999999886  79999999888877666665431   2333332 2  1           122


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      +...|++|..+|.....   ..+.   .+.+..|    .-.++.+.+.+.+...       .+.++++|-...
T Consensus        70 ~~~aDvVii~ag~~~~~---g~~R---~dl~~~n----~~i~~~i~~~i~~~~p-------~a~iiv~tNPv~  125 (318)
T 1ez4_A           70 CKDADLVVITAGAPQKP---GESR---LDLVNKN----LNILSSIVKPVVDSGF-------DGIFLVAANPVD  125 (318)
T ss_dssp             GTTCSEEEECCCC----------------CHHHH----HHHHHHHHHHHHHTTC-------CSEEEECSSSHH
T ss_pred             hCCCCEEEECCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHHHhCC-------CeEEEEeCCcHH
Confidence            34789999999963211   1111   1222333    3455555666555422       377887766554

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.52  E-value=0.0035  Score=50.79  Aligned_cols=39  Identities=23%  Similarity=0.315  Sum_probs=35.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      -++.||+++|+|+++-+|+.++..|..+|++|.++.++.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            368999999999999999999999999999999987653

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.50  E-value=0.0073  Score=49.63  Aligned_cols=73  Identities=16%  Similarity=0.293  Sum_probs=52.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+.+++++|.|+ |+||+++++.|...|++|++++|+.++.+...    +.+  +..+.     .+++.++       .
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g--~~~~~-----~~~l~~~-------l  213 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT----EMG--LVPFH-----TDELKEH-------V  213 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT--CEEEE-----GGGHHHH-------S
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCC--CeEEc-----hhhHHHH-------h
Confidence            5689999999996 89999999999999999999999876544332    223  22221     1222222       2


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ...|+|+.+...
T Consensus       214 ~~aDvVi~~~p~  225 (300)
T 2rir_A          214 KDIDICINTIPS  225 (300)
T ss_dssp             TTCSEEEECCSS
T ss_pred             hCCCEEEECCCh
Confidence            468999999884

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.45  E-value=0.0032  Score=52.39  Aligned_cols=76  Identities=16%  Similarity=0.156  Sum_probs=49.9

Q ss_pred             Cc-EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GK-VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k-~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      |+ +++|+||+|++|..++..+...|++|+.++++.++++.+. ++   +.... +  |..+.+  .+.++++  ..+++
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~~v-~--~~~~~~--~~~~~~~--~~~~~  218 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL---GASEV-I--SREDVY--DGTLKAL--SKQQW  218 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH---TCSEE-E--EHHHHC--SSCCCSS--CCCCE
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcEE-E--ECCCch--HHHHHHh--hcCCc
Confidence            44 8999999999999999999899999999999877665543 33   33222 1  211110  0111111  01369


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |++|.++|
T Consensus       219 d~vid~~g  226 (330)
T 1tt7_A          219 QGAVDPVG  226 (330)
T ss_dssp             EEEEESCC
T ss_pred             cEEEECCc
Confidence            99999998

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.44  E-value=0.011  Score=50.90  Aligned_cols=72  Identities=15%  Similarity=0.204  Sum_probs=54.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.+.+|+++|.|++ .+|+.+++.+.+.|++|++++.+......   .+.     -..+..|..|.+.+.++++      
T Consensus        31 ~~~~~~~IlIlG~G-~lg~~~~~aa~~lG~~v~v~d~~~~~p~~---~~a-----d~~~~~~~~d~~~l~~~a~------   95 (419)
T 4e4t_A           31 PILPGAWLGMVGGG-QLGRMFCFAAQSMGYRVAVLDPDPASPAG---AVA-----DRHLRAAYDDEAALAELAG------   95 (419)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCTTCHHH---HHS-----SEEECCCTTCHHHHHHHHH------
T ss_pred             cCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCcCchh---hhC-----CEEEECCcCCHHHHHHHHh------
Confidence            45789999999875 79999999999999999999876543211   111     1345688999998888873      


Q ss_pred             CCccEEEE
Q 024976           88 GKLDILVN   95 (259)
Q Consensus        88 g~id~li~   95 (259)
                       ++|+++.
T Consensus        96 -~~D~V~~  102 (419)
T 4e4t_A           96 -LCEAVST  102 (419)
T ss_dssp             -HCSEEEE
T ss_pred             -cCCEEEE
Confidence             4898884

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.43  E-value=0.0051  Score=51.37  Aligned_cols=72  Identities=11%  Similarity=0.087  Sum_probs=55.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .+.++|.|+ |.+|+.+++.|.++|. |++++++++..+ ..+      ..+.++.+|.+|++.++++      ...+.|
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a------~i~~a~  179 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKA------NVRGAR  179 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHT------CSTTEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhc------Chhhcc
Confidence            457999997 8999999999999999 999999988765 332      2478899999999887754      113577


Q ss_pred             EEEECCC
Q 024976           92 ILVNAAA   98 (259)
Q Consensus        92 ~li~~ag   98 (259)
                      .+|...+
T Consensus       180 ~vi~~~~  186 (336)
T 1lnq_A          180 AVIVDLE  186 (336)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            7877654

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.41  E-value=0.13  Score=42.47  Aligned_cols=74  Identities=15%  Similarity=0.216  Sum_probs=51.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCC----CeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI----PAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~----~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .+++.|+|+ |.+|..++..|+..|.  +|+++|++++.++....++.+...    ++.+.. |  +.           +
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~   70 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------D   70 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------G
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------H
Confidence            368999999 9999999999998885  799999998766655555543211    233332 2  11           1


Q ss_pred             HcCCccEEEECCCCC
Q 024976           86 HFGKLDILVNAAAGN  100 (259)
Q Consensus        86 ~~g~id~li~~ag~~  100 (259)
                      .+...|++|.++|..
T Consensus        71 al~~aDvViia~~~~   85 (316)
T 1ldn_A           71 DCRDADLVVICAGAN   85 (316)
T ss_dssp             GTTTCSEEEECCSCC
T ss_pred             HhCCCCEEEEcCCCC
Confidence            234689999999964

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.38  E-value=0.038  Score=44.83  Aligned_cols=84  Identities=18%  Similarity=0.142  Sum_probs=59.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC---eEEEEeCChhhHHHHHHHHH----------hcCCCeEEEEcCCCCHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALH----------SLGIPAIGLEGDVRKREDAVR   78 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~---~vv~~~r~~~~~~~~~~~~~----------~~~~~v~~~~~Dl~~~~~~~~   78 (259)
                      .+++.|.|+ |.+|.+++..|++.|+   +|++++|+.++++.+.+.+.          -...++.++.+   .+..+.+
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            357888887 7999999999999998   89999999888777665320          01335555554   3466777


Q ss_pred             HHHHHHHH-cCCccEEEECCCC
Q 024976           79 VVESTINH-FGKLDILVNAAAG   99 (259)
Q Consensus        79 ~~~~~~~~-~g~id~li~~ag~   99 (259)
                      +++++... +.+=.++|++++.
T Consensus        79 vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHhhccCCCeEEEEecCC
Confidence            77777665 4332378877653

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.37  E-value=0.0071  Score=48.73  Aligned_cols=36  Identities=8%  Similarity=0.180  Sum_probs=33.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      +.||+++|.|+++-+|+.+++.|.++|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            789999999999999999999999999999998764

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.34  E-value=0.0088  Score=48.97  Aligned_cols=72  Identities=15%  Similarity=0.310  Sum_probs=51.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+.|++++|.|+ |+||+++++.|...|++|++++|+.++.+...    ..+.  ..+  +   .+++.++       .
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g~--~~~--~---~~~l~~~-------l  211 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA----EMGM--EPF--H---ISKAAQE-------L  211 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTS--EEE--E---GGGHHHH-------T
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCCC--eec--C---hhhHHHH-------h
Confidence            4688999999995 79999999999999999999999876544332    2232  222  1   1222222       2


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      ...|+++.+..
T Consensus       212 ~~aDvVi~~~p  222 (293)
T 3d4o_A          212 RDVDVCINTIP  222 (293)
T ss_dssp             TTCSEEEECCS
T ss_pred             cCCCEEEECCC
Confidence            46899999875

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.33  E-value=0.024  Score=45.45  Aligned_cols=89  Identities=11%  Similarity=0.163  Sum_probs=57.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHH--------hcCCCeEEEEcCCCCHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALH--------SLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~--------~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      +.+.++.|.|+ |.+|..++..|.+.|++ |.+++|+.+..+...+.+.        +.-.+..++..-+ ....+.+++
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v~   85 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAELL   85 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHHH
Confidence            34557899987 89999999999999998 8899999887777655421        1001112222222 344667788


Q ss_pred             HHHHHHcCCccEEEECCCCC
Q 024976           81 ESTINHFGKLDILVNAAAGN  100 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~  100 (259)
                      +++.....+=.+++++....
T Consensus        86 ~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHhhcCCCcEEEECCCCC
Confidence            77765443334677777643

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.32  E-value=0.0033  Score=51.04  Aligned_cols=72  Identities=21%  Similarity=0.225  Sum_probs=51.2

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+++++++|.|+ |++|++++..|.+.|++|.+++|+.++.+++.+.+   +  +..  .+  +.   .+.       ..
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g--~~~--~~--~~---~~~-------~~  185 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---P--LEV--VN--SP---EEV-------ID  185 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---C--EEE--CS--CG---GGT-------GG
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---C--Cee--eh--hH---Hhh-------hc
Confidence            467899999996 69999999999999999999999987665544322   2  221  11  11   111       13


Q ss_pred             CccEEEECCCCC
Q 024976           89 KLDILVNAAAGN  100 (259)
Q Consensus        89 ~id~li~~ag~~  100 (259)
                      ..|+||++....
T Consensus       186 ~aDiVi~atp~~  197 (275)
T 2hk9_A          186 KVQVIVNTTSVG  197 (275)
T ss_dssp             GCSEEEECSSTT
T ss_pred             CCCEEEEeCCCC
Confidence            589999998853

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.30  E-value=0.021  Score=47.27  Aligned_cols=87  Identities=13%  Similarity=0.109  Sum_probs=57.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHH-------HHhcCCCeEEEEcCCCCHHHHHHHHH--
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-------LHSLGIPAIGLEGDVRKREDAVRVVE--   81 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~Dl~~~~~~~~~~~--   81 (259)
                      ..+++.|.|. |.+|..+++.|++.|++|++++|+.++.+.+.+.       +.+.-.+..++..-+.+...++.++.  
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~  108 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ  108 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence            4468888865 7999999999999999999999998876665432       11100112233344556667777775  


Q ss_pred             HHHHHcCCccEEEECCC
Q 024976           82 STINHFGKLDILVNAAA   98 (259)
Q Consensus        82 ~~~~~~g~id~li~~ag   98 (259)
                      ++.+...+=.++|++..
T Consensus       109 ~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          109 GVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             CHHHHCCTTCEEEECSC
T ss_pred             hHHhhCCCCCEEEecCC
Confidence            55555444456776654

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.26  E-value=0.002  Score=53.24  Aligned_cols=81  Identities=11%  Similarity=0.092  Sum_probs=54.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeE-EEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~-~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.|++++|.|++.-+|+.+++.|...|++|.+++|+..++....+++.   ...+ ...+..++++++.+.+.      
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~------  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK---LNKHHVEDLGEYSEDLLKKCSL------  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS---CCCCEEEEEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh---hhcccccccccccHhHHHHHhc------
Confidence            7899999999999888999999999999999999887332211111111   1111 11111134566666655      


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                       .-|+||.+.|.
T Consensus       245 -~ADIVIsAtg~  255 (320)
T 1edz_A          245 -DSDVVITGVPS  255 (320)
T ss_dssp             -HCSEEEECCCC
T ss_pred             -cCCEEEECCCC
Confidence             47999999995

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.26  E-value=0.027  Score=43.58  Aligned_cols=76  Identities=11%  Similarity=0.132  Sum_probs=52.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+..+++.|.| .|.+|.+++..|++.|++|++++|+++         .-...++.++.+.   ...++++++++.....
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~---~~~~~~v~~~l~~~~~   82 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP---YPALAALAKQYATQLK   82 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC---HHHHHHHHHHTHHHHT
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC---cHHHHHHHHHHHHhcC
Confidence            46678999999 689999999999999999999998865         1123456666544   6677788877765544


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                       =.+++++..
T Consensus        83 -~~~vi~~~~   91 (209)
T 2raf_A           83 -GKIVVDITN   91 (209)
T ss_dssp             -TSEEEECCC
T ss_pred             -CCEEEEECC
Confidence             235666554

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.25  E-value=0.19  Score=41.42  Aligned_cols=115  Identities=7%  Similarity=0.082  Sum_probs=71.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++.|+|+ |.+|..++..|+..+  .+++++|.+.++++....++.+..   .++.+.. +  +.+           .+
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~-----------a~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG-----------DL   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH-----------Hh
Confidence            36899998 999999999999987  479999999888877666665431   2233332 2  222           23


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH  159 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
                      ...|++|..+|....   ...+..+   .+..|..    .++.+.+.+.+...       .+.++++|....
T Consensus        66 ~~aD~Vii~ag~~~~---~g~~r~d---l~~~n~~----i~~~i~~~i~~~~p-------~a~iiv~tNPv~  120 (310)
T 2xxj_A           66 EGARAVVLAAGVAQR---PGETRLQ---LLDRNAQ----VFAQVVPRVLEAAP-------EAVLLVATNPVD  120 (310)
T ss_dssp             TTEEEEEECCCCCCC---TTCCHHH---HHHHHHH----HHHHHHHHHHHHCT-------TCEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCC---CCcCHHH---HHHhhHH----HHHHHHHHHHHHCC-------CcEEEEecCchH
Confidence            478999999996422   1233332   2333333    44445555544321       277887766543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.24  E-value=0.0078  Score=48.76  Aligned_cols=39  Identities=23%  Similarity=0.305  Sum_probs=35.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      -+++||+++|.|.++-+|+.++..|...|++|.++.++.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            368999999999998899999999999999999987643

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.24  E-value=0.0089  Score=48.09  Aligned_cols=69  Identities=23%  Similarity=0.292  Sum_probs=51.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++++ +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+.+.+++.   .  .     ..+.++          . .
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~---~--~-----~~~~~~----------~-~  170 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG---L--R-----AVPLEK----------A-R  170 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT---C--E-----ECCGGG----------G-G
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---c--c-----hhhHhh----------c-c
Confidence            5788 9999997 679999999999999999999999877776665542   1  1     112211          1 2


Q ss_pred             CccEEEECCCCC
Q 024976           89 KLDILVNAAAGN  100 (259)
Q Consensus        89 ~id~li~~ag~~  100 (259)
                      ..|+||++....
T Consensus       171 ~~Divi~~tp~~  182 (263)
T 2d5c_A          171 EARLLVNATRVG  182 (263)
T ss_dssp             GCSEEEECSSTT
T ss_pred             CCCEEEEccCCC
Confidence            589999998853

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.19  E-value=0.072  Score=43.77  Aligned_cols=72  Identities=10%  Similarity=0.149  Sum_probs=48.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++.|+|+ |.+|..++..|+..|.  +|+++|+++++++....++....   ....+..   .+.           +.+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~-----------~a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH-----------SELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG-----------GGGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH-----------HHhC
Confidence            6889998 8999999999999998  89999999877665555554321   1122211   121           1234


Q ss_pred             CccEEEECCCCC
Q 024976           89 KLDILVNAAAGN  100 (259)
Q Consensus        89 ~id~li~~ag~~  100 (259)
                      ..|++|.++|..
T Consensus        67 ~aDvVIi~~~~~   78 (304)
T 2v6b_A           67 DAQVVILTAGAN   78 (304)
T ss_dssp             TCSEEEECC---
T ss_pred             CCCEEEEcCCCC
Confidence            689999999853

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.18  E-value=0.01  Score=48.49  Aligned_cols=39  Identities=23%  Similarity=0.287  Sum_probs=35.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      -++.||+++|.|+++-+|+.++..|.+.|++|.++.|+.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            368999999999998899999999999999999998743

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.17  E-value=0.017  Score=46.93  Aligned_cols=85  Identities=14%  Similarity=0.061  Sum_probs=56.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHH-------HHhcCCCeEEEEcCCCCHHHHHHHH---HH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-------LHSLGIPAIGLEGDVRKREDAVRVV---ES   82 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~Dl~~~~~~~~~~---~~   82 (259)
                      +++.|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+.       +.+.-.+..++..-+.+...++.++   ++
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            47888875 7999999999999999999999998876665431       0000001223333455666777777   66


Q ss_pred             HHHHcCCccEEEECCC
Q 024976           83 TINHFGKLDILVNAAA   98 (259)
Q Consensus        83 ~~~~~g~id~li~~ag   98 (259)
                      +.....+=.++|++..
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            6555444456777654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.16  E-value=0.012  Score=46.95  Aligned_cols=76  Identities=9%  Similarity=0.043  Sum_probs=55.9

Q ss_pred             EEEEeCCccchHHHHHHHHHHc-CCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           14 VALLTGGGSGIGFEISLQLGKH-GAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~-G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++|.|++|.+|+.+++.+.+. |++|+.+ ++. +.++....    ...   -+.+|++.++.+.+.++.+.+.  +++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~-~dl~~~~~----~~~---DvvIDfT~p~a~~~~~~~a~~~--g~~   71 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG-DPLSLLTD----GNT---EVVIDFTHPDVVMGNLEFLIDN--GIH   71 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT-CCTHHHHH----TTC---CEEEECSCTTTHHHHHHHHHHT--TCE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC-CCHHHHhc----cCC---cEEEEccChHHHHHHHHHHHHc--CCC
Confidence            5899999999999999999876 8887754 543 33333221    122   2677999999988888777664  788


Q ss_pred             EEEECCCC
Q 024976           92 ILVNAAAG   99 (259)
Q Consensus        92 ~li~~ag~   99 (259)
                      +|+-..|.
T Consensus        72 ~VigTTG~   79 (245)
T 1p9l_A           72 AVVGTTGF   79 (245)
T ss_dssp             EEECCCCC
T ss_pred             EEEcCCCC
Confidence            99988884

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.15  E-value=0.017  Score=47.82  Aligned_cols=74  Identities=9%  Similarity=0.074  Sum_probs=49.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCC---CeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..++.|+|+ |.+|..++..|+..|.  +|+++|.++++++....++.+...   ++.+. .  .+           .+.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~-----------~~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD-----------YSD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC-----------HHH
Confidence            357999998 9999999999999987  799999998776655555544221   22211 1  11           122


Q ss_pred             cCCccEEEECCCCC
Q 024976           87 FGKLDILVNAAAGN  100 (259)
Q Consensus        87 ~g~id~li~~ag~~  100 (259)
                      +...|++|.++|..
T Consensus        72 ~~~aDvVii~~g~p   85 (318)
T 1y6j_A           72 VKDCDVIVVTAGAN   85 (318)
T ss_dssp             GTTCSEEEECCCC-
T ss_pred             hCCCCEEEEcCCCC
Confidence            35789999999963

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.11  E-value=0.0084  Score=48.60  Aligned_cols=38  Identities=21%  Similarity=0.195  Sum_probs=34.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      -++.||+++|.|+++-+|+.+++.|..+|++|.++.++
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            36899999999999889999999999999999888764

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=96.09  E-value=0.0018  Score=55.48  Aligned_cols=47  Identities=19%  Similarity=0.256  Sum_probs=38.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEE-EEeC----------ChhhHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIA-IMGR----------RKTVLRSAVAA   55 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv-~~~r----------~~~~~~~~~~~   55 (259)
                      .+++|++++|+| .|.+|+.+++.|.+.|++|+ +.|+          +.+.+.+..++
T Consensus       214 ~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          214 LDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            368999999998 78899999999999999988 7777          55555555544

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.09  E-value=0.027  Score=46.09  Aligned_cols=80  Identities=15%  Similarity=0.150  Sum_probs=53.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .+++.|.||.|.+|.+++..|.+.|++|++++|+.+.  ...+.+  ...++.++.+-...   +.++++++.....+=.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~~~--~~aDvVilavp~~~---~~~vl~~l~~~l~~~~   93 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAESIL--ANADVVIVSVPINL---TLETIERLKPYLTENM   93 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHHHH--TTCSEEEECSCGGG---HHHHHHHHGGGCCTTS
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHHHh--cCCCEEEEeCCHHH---HHHHHHHHHhhcCCCc
Confidence            3579999999999999999999999999999987653  111112  23457776665443   6666666654433223


Q ss_pred             EEEECCC
Q 024976           92 ILVNAAA   98 (259)
Q Consensus        92 ~li~~ag   98 (259)
                      +|+..++
T Consensus        94 iv~~~~s  100 (298)
T 2pv7_A           94 LLADLTS  100 (298)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            5555554

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.09  E-value=0.012  Score=47.83  Aligned_cols=39  Identities=21%  Similarity=0.187  Sum_probs=35.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .++.||+++|.|++.-+|+.+++.|...|++|.++.++.
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  193 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT  193 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            368999999999998899999999999999999987654

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.06  E-value=0.16  Score=41.72  Aligned_cols=113  Identities=12%  Similarity=0.157  Sum_probs=69.1

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhc----CCCeEEEE-cCCCCHHHHHHHHHHHHHHc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLE-GDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~-~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.|+|+ |.+|..++..|+..|. +|+++|.+.++++....++...    +....+.. .|   .+           .+
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~~-----------a~   65 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS---YE-----------DM   65 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC---GG-----------GG
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC---HH-----------Hh
Confidence            3789998 9999999999999888 6999999988777655555432    22222222 22   11           23


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ...|++|..+|.... +  ..+..++       +....-+.+.+.+.+.+...       .+.++++|...
T Consensus        66 ~~aD~Vi~~ag~~~k-~--G~~r~dl-------~~~n~~i~~~i~~~i~~~~p-------~a~iiv~tNPv  119 (308)
T 2d4a_B           66 RGSDIVLVTAGIGRK-P--GMTREQL-------LEANANTMADLAEKIKAYAK-------DAIVVITTNPV  119 (308)
T ss_dssp             TTCSEEEECCSCCCC-S--SCCTHHH-------HHHHHHHHHHHHHHHHHHCT-------TCEEEECCSSH
T ss_pred             CCCCEEEEeCCCCCC-C--CCcHHHH-------HHHHHHHHHHHHHHHHHHCC-------CeEEEEeCCch
Confidence            478999999996432 1  2233322       22333355555665554321       26677776544

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.05  E-value=0.13  Score=42.05  Aligned_cols=39  Identities=18%  Similarity=0.354  Sum_probs=34.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      +++.|.|+ |.+|..++..|++.|++|++++++++.++..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            57899988 7999999999999999999999998876654

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.04  E-value=0.027  Score=47.76  Aligned_cols=72  Identities=11%  Similarity=0.178  Sum_probs=53.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.+.+|+++|.|++ .+|+.+++.+.+.|++|++++.+......      ..  .-..+..|..|.+.+.+++++     
T Consensus         8 ~~~~~~~IlIlG~G-~lg~~la~aa~~lG~~viv~d~~~~~p~~------~~--ad~~~~~~~~d~~~l~~~~~~-----   73 (377)
T 3orq_A            8 KLKFGATIGIIGGG-QLGKMMAQSAQKMGYKVVVLDPSEDCPCR------YV--AHEFIQAKYDDEKALNQLGQK-----   73 (377)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCTTCTTG------GG--SSEEEECCTTCHHHHHHHHHH-----
T ss_pred             cCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCChhh------hh--CCEEEECCCCCHHHHHHHHHh-----
Confidence            45789999999865 79999999999999999999876542100      01  123567899999988887753     


Q ss_pred             CCccEEEE
Q 024976           88 GKLDILVN   95 (259)
Q Consensus        88 g~id~li~   95 (259)
                        +|+++.
T Consensus        74 --~dvi~~   79 (377)
T 3orq_A           74 --CDVITY   79 (377)
T ss_dssp             --CSEEEE
T ss_pred             --CCccee
Confidence              677643

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.02  E-value=0.055  Score=45.60  Aligned_cols=85  Identities=12%  Similarity=0.136  Sum_probs=54.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHH----------H-Hhc-CCCeEEEEcCCCCHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA----------L-HSL-GIPAIGLEGDVRKREDAV   77 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~----------~-~~~-~~~v~~~~~Dl~~~~~~~   77 (259)
                      ++.+++.|+| .|-+|..+++.|++.|++|++++|+.++.+.+.+.          + ... .+++.++.  +.+. .++
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~--vp~~-~v~   95 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLM--VPAA-VVD   95 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEEC--SCGG-GHH
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEe--CCHH-HHH
Confidence            4567899997 57999999999999999999999998776654321          1 111 11344333  2333 666


Q ss_pred             HHHHHHHHHcCCccEEEECCC
Q 024976           78 RVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        78 ~~~~~~~~~~g~id~li~~ag   98 (259)
                      ++++++.....+=+++|.+..
T Consensus        96 ~vl~~l~~~l~~g~iiId~st  116 (358)
T 4e21_A           96 SMLQRMTPLLAANDIVIDGGN  116 (358)
T ss_dssp             HHHHHHGGGCCTTCEEEECSS
T ss_pred             HHHHHHHhhCCCCCEEEeCCC
Confidence            666666555444456666655

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.97  E-value=0.14  Score=42.06  Aligned_cols=73  Identities=14%  Similarity=0.124  Sum_probs=51.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhc----CCCeEEEE-cCCCCHHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLE-GDVRKREDAVRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~-~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++.|+|+ |.+|..++..|+..|. +|+++|.++++++....++...    .....+.. .|   .+           .
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~~-----------a   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN---YA-----------D   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC---GG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC---HH-----------H
Confidence            57999999 9999999999999996 8999999988777655555432    11222211 22   11           1


Q ss_pred             cCCccEEEECCCCC
Q 024976           87 FGKLDILVNAAAGN  100 (259)
Q Consensus        87 ~g~id~li~~ag~~  100 (259)
                      +...|++|.++|..
T Consensus        68 ~~~aD~Vi~a~g~p   81 (309)
T 1ur5_A           68 TANSDVIVVTSGAP   81 (309)
T ss_dssp             GTTCSEEEECCCC-
T ss_pred             HCCCCEEEEcCCCC
Confidence            24689999999963

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=95.96  E-value=0.14  Score=39.30  Aligned_cols=75  Identities=15%  Similarity=0.289  Sum_probs=55.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC--CeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI--PAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .++++|-.|++.|.   ++..+++.+.+|+.++.+++.++.+.+.+...+.  ++.++..|+.+.          ....+
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----------~~~~~  121 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA----------LADLP  121 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG----------GTTSC
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh----------cccCC
Confidence            46789999988763   4455666688999999999988888777765543  599999998752          11224


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      .+|.++.+.+
T Consensus       122 ~~D~v~~~~~  131 (204)
T 3njr_A          122 LPEAVFIGGG  131 (204)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEECCc
Confidence            7999997764

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.91  E-value=0.011  Score=48.15  Aligned_cols=38  Identities=16%  Similarity=0.172  Sum_probs=34.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      -++.||+++|.|++.-+|+.+++.|...|++|.++.++
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  198 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK  198 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence            36899999999999999999999999999999998755

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.90  E-value=0.031  Score=46.62  Aligned_cols=79  Identities=13%  Similarity=0.094  Sum_probs=50.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeE-EEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAI-AIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v-v~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ..|++++|.|+ |++|...+..+...|+.+ +.+++++++++. .+   +.|....+..-| .+..   +..+++ ....
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~-a~---~lGa~~~i~~~~-~~~~---~~~~~~-~~~~  228 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL-AK---SFGAMQTFNSSE-MSAP---QMQSVL-RELR  228 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HH---HTTCSEEEETTT-SCHH---HHHHHH-GGGC
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH-HH---HcCCeEEEeCCC-CCHH---HHHHhh-cccC
Confidence            46889999987 899999998888999974 667877765443 22   345443332222 2222   222222 2235


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      .+|+++.+.|
T Consensus       229 g~d~v~d~~G  238 (346)
T 4a2c_A          229 FNQLILETAG  238 (346)
T ss_dssp             SSEEEEECSC
T ss_pred             Cccccccccc
Confidence            6899999998

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.89  E-value=0.039  Score=43.18  Aligned_cols=74  Identities=20%  Similarity=0.197  Sum_probs=50.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+++||.+||+||+ .+|...++.|.+.|++|++++.+...  + .+++.+. .++.++.-+...            +.+
T Consensus        27 l~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~VtVvap~~~~--~-l~~l~~~-~~i~~i~~~~~~------------~dL   89 (223)
T 3dfz_A           27 LDLKGRSVLVVGGG-TIATRRIKGFLQEGAAITVVAPTVSA--E-INEWEAK-GQLRVKRKKVGE------------EDL   89 (223)
T ss_dssp             ECCTTCCEEEECCS-HHHHHHHHHHGGGCCCEEEECSSCCH--H-HHHHHHT-TSCEEECSCCCG------------GGS
T ss_pred             EEcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCCH--H-HHHHHHc-CCcEEEECCCCH------------hHh
Confidence            36999999999985 89999999999999999999876432  1 2222222 245555544432            112


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      ...|.||.+.+
T Consensus        90 ~~adLVIaAT~  100 (223)
T 3dfz_A           90 LNVFFIVVATN  100 (223)
T ss_dssp             SSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            35777777665

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.89  E-value=0.022  Score=59.65  Aligned_cols=82  Identities=17%  Similarity=0.206  Sum_probs=54.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g   88 (259)
                      -.|.+|||.||+||+|...+......|++|+.++++.++.+.+.+.+...+... ++  |-.+.+    +.+++.+.. |
T Consensus      1666 ~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~-v~--~~~~~~----~~~~i~~~t~g 1738 (2512)
T 2vz8_A         1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETC-FA--NSRDTS----FEQHVLRHTAG 1738 (2512)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTT-EE--ESSSSH----HHHHHHHTTTS
T ss_pred             CCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceE-Ee--cCCCHH----HHHHHHHhcCC
Confidence            368899999999999999998888899999999888776655544321223221 22  233322    233333332 2


Q ss_pred             -CccEEEECCC
Q 024976           89 -KLDILVNAAA   98 (259)
Q Consensus        89 -~id~li~~ag   98 (259)
                       ++|+++++.+
T Consensus      1739 ~GvDvVld~~g 1749 (2512)
T 2vz8_A         1739 KGVDLVLNSLA 1749 (2512)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCC
Confidence             5999998865

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.87  E-value=0.012  Score=45.79  Aligned_cols=39  Identities=10%  Similarity=0.108  Sum_probs=33.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS   51 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~   51 (259)
                      .+++.|+| +|.+|.++++.|.+.|++|++++|+.+..+.
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~   66 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR   66 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            35799998 7899999999999999999999998776544

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.83  E-value=0.031  Score=46.67  Aligned_cols=77  Identities=14%  Similarity=0.128  Sum_probs=48.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      -.|.+++|.|+ |++|...+..+... |++|+.+++++++++..    ...+....+   |-++.+..+    ++.+..+
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~----~~~Ga~~~i---~~~~~~~~~----~v~~~t~  229 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA----KKIGADVTI---NSGDVNPVD----EIKKITG  229 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH----HHTTCSEEE---EC-CCCHHH----HHHHHTT
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhh----hhcCCeEEE---eCCCCCHHH----HhhhhcC
Confidence            35789999987 67787777777765 77899999988765432    233443333   333332222    2333322


Q ss_pred             --CccEEEECCC
Q 024976           89 --KLDILVNAAA   98 (259)
Q Consensus        89 --~id~li~~ag   98 (259)
                        .+|.++.+++
T Consensus       230 g~g~d~~~~~~~  241 (348)
T 4eez_A          230 GLGVQSAIVCAV  241 (348)
T ss_dssp             SSCEEEEEECCS
T ss_pred             CCCceEEEEecc
Confidence              5888888887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	259
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-54
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	5e-51
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	9e-51
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-50
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-48
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	4e-48
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	5e-48
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	5e-47
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	7e-47
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-46
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-45
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	5e-45
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-44
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-44
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-44
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-44
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-44
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	6e-44
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-43
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-43
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-43
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-43
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-42
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-42
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-42
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-42
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	7e-42
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	8e-42
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-41
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	6e-41
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-40
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-39
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-38
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-38
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-37
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	5e-37
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	9e-37
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-36
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-36
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-36
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	5e-36
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	6e-36
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-35
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-35
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-35
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	8e-35
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-34
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-33
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-32
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	6e-31
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-30
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-30
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-30
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-29
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	6e-26
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-25
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-23
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-23
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-22
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-21
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	6e-19
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	1e-16
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	5e-14
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-12
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-11
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	8e-11
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	8e-10
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	9e-10
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.002
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	0.004
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.004

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  173 bits (440), Expect = 2e-54
 Identities = 74/240 (30%), Positives = 114/240 (47%), Gaps = 13/240 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K+A++TGG +GIG  I+ +    GA IAI          A AA+ +LG   + ++ D
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLTVKCD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V +  D     +  I+ FG+ DILVN A    L+P ++L+   ++   EI+    F+M  
Sbjct: 61  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +  +K+ G         G IIN+++T ++       H  + KAA    TR+LA + G 
Sbjct: 121 AFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG- 171

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAA 248
              I VN IAP  +  TA     A   +     + + A        D+  AA +LASD A
Sbjct: 172 KDGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDA 230

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  165 bits (419), Expect = 5e-51
 Identities = 63/240 (26%), Positives = 96/240 (40%), Gaps = 11/240 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K  L+TGG  GIG  I  +    GA I    R +  L   ++     G    G   D
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
              R +  +++++  + F GKLDIL+N        P  D +   F   I  +    + + 
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 125

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A   LK  G         G II +S+     +       SA K A++ + R+LA EW 
Sbjct: 126 QLAHPLLKASGC--------GNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA 177

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
               IR N +AP  I  T     +  +E +          +FGE  +++    +L   AA
Sbjct: 178 -SDGIRANAVAPAVI-ATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAA 235

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (417), Expect = 9e-51
 Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 13/244 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
            + ++AL+TG   GIG  ++  L + G  +    R    +    A   S G P   I   
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
            D+   ED + +  +  +    +DI +N A           S +G++ +  ++ +   I 
Sbjct: 68  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 127

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSITRSLAL 185
             EA + +K+           G IINI++   +      +    SA K AV ++T  L  
Sbjct: 128 TREAYQSMKERNVD------DGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 181

Query: 186 EWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
           E       IR   I+PG + +T    KL  ++   KA       K  +  D+A A +Y+ 
Sbjct: 182 ELREAQTHIRATCISPGVV-ETQFAFKL-HDKDPEKAAATYEQMKCLKPEDVAEAVIYVL 239

Query: 245 SDAA 248
           S  A
Sbjct: 240 STPA 243

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  164 bits (416), Expect = 1e-50
 Identities = 70/244 (28%), Positives = 108/244 (44%), Gaps = 19/244 (7%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
           +  GK  L+TGG  GIG  I+    + GA +A+   R      A A      I     + 
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA------IGGAFFQV 55

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+    + VR VE      G++D+LVN AA      A  +    +R V+E++      + 
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A + ++K G G         I+N+++     A       +A+K  + ++TRSLAL+  
Sbjct: 116 ALAAREMRKVGGGA--------IVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA 167

Query: 189 TDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
               IRVN +APG I       A      PE  R    D  A  + G+  ++A A L+LA
Sbjct: 168 -PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 226

Query: 245 SDAA 248
           S+ A
Sbjct: 227 SEKA 230

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  158 bits (401), Expect = 2e-48
 Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 18/244 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+GKVAL+TGG SG+G E+   L   GA +A     +   +   A L   G  ++ +  D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V    D   V+ +     G L++LVN A        E      F  +++I++   FI C 
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           + +  +K+         +GG IIN+++   +         SA+KAAV ++TR+ AL    
Sbjct: 121 QGIAAMKE---------TGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRK 171

Query: 190 D-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----FGEKWDIAMAALYLA 244
             YAIRVN I P  I  T  +    P+ +  +   +               IA   L+LA
Sbjct: 172 QGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230

Query: 245 SDAA 248
           SD +
Sbjct: 231 SDES 234

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  158 bits (400), Expect = 4e-48
 Identities = 66/253 (26%), Positives = 102/253 (40%), Gaps = 23/253 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
              KVA++TG  +GIG   ++   + GA + I GR    L      + + G+       +
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSV 122
             DV        ++ +T+  FGKLDILVN A      +        S   +   + ++  
Sbjct: 63  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 122

Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
               +  +A+ +L            G I+   S      AT    + S AKAA+D  TR+
Sbjct: 123 SVIALTKKAVPHLSSTK--------GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRN 174

Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWD 235
            A++    + IRVN I+PG +    G +   PEE   K    MA  K        G+  D
Sbjct: 175 TAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQD 233

Query: 236 IAMAALYLASDAA 248
           IA    +LA    
Sbjct: 234 IAEVIAFLADRKT 246

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  157 bits (398), Expect = 5e-48
 Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 10/240 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVA++TGG  GIG  I+ +  + GA + I GR   V   A  ++ +        + D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
               +   ++ ++T   FG +  LVN A        E+ +   +R ++ ++  G F    
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             ++ +K  G        G  IIN+S+   +         +A+K AV  +++S AL+   
Sbjct: 123 LGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCAL 175

Query: 190 -DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            DY +RVN + PG I  T  V  L   E              GE  DIA   +YLAS+ +
Sbjct: 176 KDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNES 234

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  155 bits (393), Expect = 5e-47
 Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 23/253 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
              K  ++TG  +GIG   ++   + GA + I GR    L      +   G+       +
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSV 122
             DV   +   +++ ST+  FGK+D+LVN A       F     D   + +   ++++  
Sbjct: 63  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 122

Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
               M  +   +L            G I+   S      A    ++ + AKAA+D  TRS
Sbjct: 123 AVIEMTKKVKPHLVASK--------GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRS 174

Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWD 235
            A++    + IRVN ++PG ++     +   P++   K  ++MA++K        G+   
Sbjct: 175 TAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEH 233

Query: 236 IAMAALYLASDAA 248
           IA   L+LA    
Sbjct: 234 IANIILFLADRNL 246

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (391), Expect = 7e-47
 Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 21/248 (8%)

Query: 7   GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
           G    GKV ++TGGG GIG  I       GA + I  + ++  R+    L      A+ +
Sbjct: 1   GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----AVFI 56

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTF 125
             DV + +D   +V  TI  FG+LD +VN A  +      E+ S  GFR ++E++ +GT+
Sbjct: 57  LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY 116

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            +   AL YL+K           G +INIS+ +        +   A K AV ++T++LAL
Sbjct: 117 TLTKLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALAL 167

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAA 240
           +    Y +RVN I+PG I  T    +LA     P     +        + G+  ++  AA
Sbjct: 168 DES-PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAA 225

Query: 241 LYLASDAA 248
           ++LAS+A 
Sbjct: 226 VFLASEAN 233

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  152 bits (386), Expect = 4e-46
 Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 15/244 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+G  AL+TGG  GIG+ I  +L   GA++    R +  L   +    S G        D
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +  R +   ++ +  NHF GKL+ILVN A       A+D +   +  ++ I+    + + 
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 125

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A  +LK   RG         ++ IS+     A  Y+    A K A+D +TR LA EW 
Sbjct: 126 VLAHPFLKASERGN--------VVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA 177

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLA 244
               IRVNG+ PG I  T+ V     +  + +  + +       + GE  ++A    +L 
Sbjct: 178 -KDNIRVNGVGPGVI-ATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC 235

Query: 245 SDAA 248
             AA
Sbjct: 236 FPAA 239

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  151 bits (383), Expect = 1e-45
 Identities = 69/239 (28%), Positives = 98/239 (41%), Gaps = 13/239 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK  ++TGG  G+G E + Q    GA + +         +    L   G  A     D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   ED  RVV      FG +D LVN A  +  +  E  S   FR V+EI+  G FI   
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +  +K  G        GG I+NIS+              A+K  V  +++  A+E GT
Sbjct: 120 TVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGT 171

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           D  IRVN + PG    T   ++    +      +        E  +IA A + L SD +
Sbjct: 172 DR-IRVNSVHPGMT-YTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS 228

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  150 bits (379), Expect = 5e-45
 Identities = 50/240 (20%), Positives = 100/240 (41%), Gaps = 4/240 (1%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
              K  ++TGG  GIG   +  +   GA +A++ R           +    G+     + 
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV   +   + ++      G +  L+  A  + + PA +L+   F  V +++  G F  C
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 126

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
               K   +  +  +   +  +   I        +  Q+  +++KAA  ++ + LA EW 
Sbjct: 127 RAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA 186

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
               IRVN ++PG + +T   + +  ++IR      +   +F +  ++   A+ L SD A
Sbjct: 187 -SAGIRVNALSPGYV-NTDQTAHM-DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHA 243

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 1e-44
 Identities = 76/254 (29%), Positives = 119/254 (46%), Gaps = 17/254 (6%)

Query: 2   ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----- 56
            S     +L+G+VA++TGG +GIG  I  +L + G+ + I  R+   L+SA   L     
Sbjct: 2   RSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP 61

Query: 57  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
            +     I ++ ++R  E+   +V+ST++ FGK++ LVN   G FL PAE +S  G+  V
Sbjct: 62  PTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV 121

Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
           +E +  GTF MC        K   G          I              +H  AA+A V
Sbjct: 122 LETNLTGTFYMCKAVYSSWMKEHGGS---------IVNIIVPTKAGFPLAVHSGAARAGV 172

Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKW 234
            ++T+SLALEW     IR+N +APG I     V       +     +   + A + G   
Sbjct: 173 YNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE 231

Query: 235 DIAMAALYLASDAA 248
           +++    +L S AA
Sbjct: 232 EVSSVVCFLLSPAA 245

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  147 bits (373), Expect = 2e-44
 Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 17/239 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LK K  L+TG   GIG        K GA +      +  LR A  A     + A  +  D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-----VGAHPVVMD 57

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V       R     + H G+LD +V+ A          +    +  V+ ++  G+F++  
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK 117

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A + +++              I ++A+  Y     Q + +A+ A V  +TR+LALE G 
Sbjct: 118 AASEAMRE---------KNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELG- 167

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            + IRVN +APG I +T   +K+ PE++R KA       + G+  ++A AAL+L SD +
Sbjct: 168 RWGIRVNTLAPGFI-ETRMTAKV-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDES 224

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  149 bits (376), Expect = 3e-44
 Identities = 80/250 (32%), Positives = 124/250 (49%), Gaps = 13/250 (5%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-L 59
           M  P      +GKVA +TGGG+G+G  ++  L   GA   I  R+  VL++    + S  
Sbjct: 17  MLPPNS---FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT 73

Query: 60  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
           G     ++ DVR  +     V   I   G  +I++N AAGNF+ P E LSPN ++T+ +I
Sbjct: 74  GNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDI 133

Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
              GT  +  E  K L K  +       G   ++I+     T + + +  ++AKA V+++
Sbjct: 134 VLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGFVVPSASAKAGVEAM 186

Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAM 238
           ++SLA EWG  Y +R N I PGPIK     S+L P      +    +   + G   ++A 
Sbjct: 187 SKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELAN 245

Query: 239 AALYLASDAA 248
            A +L SD A
Sbjct: 246 LAAFLCSDYA 255

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  147 bits (373), Expect = 4e-44
 Identities = 75/252 (29%), Positives = 114/252 (45%), Gaps = 24/252 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
           L+GKVAL+TG G GIG E++++LG+ G  + +     T      VAA+   G  A  ++ 
Sbjct: 16  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 75

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +V   ED VR+ E  +  FGKLDI+ + +        +D++P  F  V  I++ G F + 
Sbjct: 76  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 135

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA K+L+ GGR     S  G            A       S +K A+++  R +A++  
Sbjct: 136 REAYKHLEIGGRLILMGSITG---------QAKAVPKHAVYSGSKGAIETFARCMAIDMA 186

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEI------------RSKATDYMAAYKFGEKWDI 236
            D  I VN +APG I  T     +  E I               A  +    + G   DI
Sbjct: 187 -DKKITVNVVAPGGI-KTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI 244

Query: 237 AMAALYLASDAA 248
           A    +LAS+  
Sbjct: 245 ARVVCFLASNDG 256

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  147 bits (372), Expect = 4e-44
 Identities = 77/240 (32%), Positives = 116/240 (48%), Gaps = 9/240 (3%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
           L+G+VAL+TGG  G+GF I+  L + G ++ +  R       A   L    G+  +    
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV   E+  +++E+    FGKLD +VNAA  N   PAE+   + FR VIE++  GT+ +C
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 122

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA             S +  II   S T+           +A+K  V S+T++LA EWG
Sbjct: 123 REAFSL-------LRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG 175

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
             Y IRVN IAPG  +     +  +  E        +   + G   D+   A++LAS+ A
Sbjct: 176 -RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEA 234

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  147 bits (371), Expect = 6e-44
 Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 11/239 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            + KVAL+TG G GIG EI+  L K  + +  + R +    S V  + S G  + G  GD
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 67

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V K+E+   V+   +     +DILVN A          +  + +  V+  +    F +  
Sbjct: 68  VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              K +             G IINIS+ +  T    Q + S++KA V   T+SLA E   
Sbjct: 128 PISKRMINNR--------YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA- 178

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              I VN IAPG I           E+I+      + A + G   ++A  A +L+SD +
Sbjct: 179 SRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKS 235

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  146 bits (369), Expect = 1e-43
 Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 11/239 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK A++TG G+GIG EI++     GA++ +           V  +  LG  A     D
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   ++   + +  I+  GK+DILVN A G    P  D+    FR   E++    F +  
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQ 127

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
                ++K        + GG+I+ I++             +++KAA   + R++A + G 
Sbjct: 128 LVAPEMEK--------NGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG- 178

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
           +  IRVNGIAPG I  T  +  +   EI  K   +    + G+  DIA AAL+L S AA
Sbjct: 179 EKNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA 236

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  146 bits (368), Expect = 2e-43
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 22/251 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
           L GKVAL TG G GIG  I+++LG+ GA++ +     +      VA L  LG   + ++ 
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           D+ K  + V + +  ++HFG LD +++ +         +++   F  V  +++ G F + 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 123

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            + LK+ ++GGR   +SS   ++         T        + +KAAV+   R+ A++ G
Sbjct: 124 QQGLKHCRRGGRIILTSSIAAVM---------TGIPNHALYAGSKAAVEGFCRAFAVDCG 174

Query: 189 TDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
               + VN IAPG +K              G   +  E+I     +     + G   DI 
Sbjct: 175 -AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIG 233

Query: 238 MAALYLASDAA 248
            A   L  + +
Sbjct: 234 RAVSALCQEES 244

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 2e-43
 Identities = 58/239 (24%), Positives = 94/239 (39%), Gaps = 16/239 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L G+  L+TG G GIG      L   GA +  + R +  L S V            +  D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   E      E  +   G +D+LVN AA   L P  +++   F    E++      +  
Sbjct: 61  LGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              + L   G           I+N+S+     A        + K A+D +T+ +ALE G 
Sbjct: 117 IVARGLIARGVPG-------AIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG- 168

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            + IRVN + P  +  + G +  +         + +   KF E   +  A L+L SD +
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS 227

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  144 bits (364), Expect = 5e-43
 Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 16/239 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             G  AL+TG G GIG +    L   GA +  + R  + L S              +  D
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVD 58

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +   +      E  +   G +D+LVN AA   + P  +++   F     ++    F +  
Sbjct: 59  LGDWDA----TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 114

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              + +             G I+N+S+ + +      I  S+ K A+  +T+++A+E G 
Sbjct: 115 MVARDMIN-------RGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG- 166

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            + IRVN + P  +    G    A  E   K  +     KF E  D+  + L+L SD +
Sbjct: 167 PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRS 225

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  143 bits (362), Expect = 1e-42
 Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 16/246 (6%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
            +VAL+TG  SGIG EI+ +LGK G  + +  R +  LR+ +  L   G+ A G   DVR
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
              +   +V + +  +G +D+LVN A         +L+   +  V+E +  G F +  + 
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQV 121

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
           LK      RG       G I+NI++T       +    SA+K  V   T++L LE     
Sbjct: 122 LKAGGMLERGT------GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELA-RT 174

Query: 192 AIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
            I VN + PG ++           + + +++ EE   + T  +   ++ +  ++A    Y
Sbjct: 175 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY 234

Query: 243 LASDAA 248
           L    A
Sbjct: 235 LIGPGA 240

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  143 bits (361), Expect = 2e-42
 Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 14/244 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKG  AL+TGG  GIG+ I  +L   GA +    R +  L   +      G+   G   D
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 70  VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           +  R +  +++++  + F GKL+ILVN A       A+D +   +  ++  +    + + 
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 123

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
             A   LK    G         +I +S+   ++A       SA+K A++ +T+SLA EW 
Sbjct: 124 QIAYPLLKASQNGN--------VIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 175

Query: 189 TDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
               IRVN +APG I     +TA       +E            + G+  +++    +L 
Sbjct: 176 -KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC 234

Query: 245 SDAA 248
             AA
Sbjct: 235 FPAA 238

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  143 bits (361), Expect = 2e-42
 Identities = 72/240 (30%), Positives = 118/240 (49%), Gaps = 9/240 (3%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEG 68
           L+GKV ++TG  +G+G  ++++     A + +  R K     S +  +  +G  AI ++G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV    D + +V+S I  FGKLD+++N A     V + ++S + +  VI+ +  G F+  
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
            EA+KY          +   G +IN+S+          +H +A+K  +  +T +LALE+ 
Sbjct: 125 REAIKY-------FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
               IRVN I PG I       K A  E R+     +     GE  +IA  A +LAS  A
Sbjct: 178 -PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA 236

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  143 bits (363), Expect = 3e-42
 Identities = 52/255 (20%), Positives = 101/255 (39%), Gaps = 36/255 (14%)

Query: 3   SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAV 53
           SP +     G+V L+TG G G+G   +L   + GA + +         +G+  +     V
Sbjct: 1   SPLR---FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVV 57

Query: 54  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 113
             +   G  A+     V   E   ++V++ ++ FG++D++VN A          +S   +
Sbjct: 58  EEIRRRGGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDW 114

Query: 114 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
             +  +   G+F +   A  ++KK           G II  ++       + Q + SAAK
Sbjct: 115 DIIQRVHLRGSFQVTRAAWDHMKKQN--------YGRIIMTASASGIYGNFGQANYSAAK 166

Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
             +  +  +L +E      I  N IAP     +     + PE++           +  + 
Sbjct: 167 LGLLGLANTLVIEGR-KNNIHCNTIAPNAG--SRMTETVMPEDLV----------EALKP 213

Query: 234 WDIAMAALYLASDAA 248
             +A   L+L  ++ 
Sbjct: 214 EYVAPLVLWLCHESC 228

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 7e-42
 Identities = 38/241 (15%), Positives = 80/241 (33%), Gaps = 12/241 (4%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           + G++ L+TG G GIG   + +  K  + + +    K  L    A    LG        D
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 64

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
              RED     +      G + ILVN A   +                E++ +  F    
Sbjct: 65  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK 124

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             L  + K           G I+ +++   + +  + +   ++K A     ++L  E   
Sbjct: 125 AFLPAMTKNN--------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAA 176

Query: 190 --DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
                ++   + P  + +T  +   +     +   + +   +           +++ S  
Sbjct: 177 LQITGVKTTCLCPNFV-NTGFIKNPSTSLGPTLEPEEVVN-RLMHGILTEQKMIFIPSSI 234

Query: 248 A 248
           A
Sbjct: 235 A 235

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 8e-42
 Identities = 68/249 (27%), Positives = 105/249 (42%), Gaps = 24/249 (9%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEG 68
            GKVAL+TG   GIG   +  L   GA +A++           AALH        + ++ 
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           DV  ++         ++HFG+LDILVN A  N        +   +   ++I+ V      
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGT 113

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
           +  L Y+ K   G+     GGIIIN+S+         Q    A+K  +   TRS AL   
Sbjct: 114 YLGLDYMSKQNGGE-----GGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 168

Query: 189 T-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMAA 240
             +  +R+N I PG + +TA +  +  EE   +  +Y    K         +   IA   
Sbjct: 169 LMNSGVRLNAICPGFV-NTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL 227

Query: 241 LYLASDAAV 249
           + L  D A+
Sbjct: 228 ITLIEDDAL 236

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  142 bits (358), Expect = 1e-41
 Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 21/251 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGL 66
             GK  ++TG  +GIG   ++   K GA + I GR +  L      +   G+PA     +
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGT 124
             DV +      ++ +T+  FGK+DILVN A  N        D     ++   +++    
Sbjct: 62  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 121

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
             M  +  ++L K            I+   S      A     + + AKAA+D  TR  A
Sbjct: 122 IEMTQKTKEHLIKTKG--------EIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTA 173

Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIA 237
           ++    + +RVN ++PG +      +   PE    K   ++ + K        G+  +IA
Sbjct: 174 IDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA 232

Query: 238 MAALYLASDAA 248
              ++LA    
Sbjct: 233 NIIVFLADRNL 243

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  139 bits (352), Expect = 6e-41
 Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 14/244 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L+ KVA++TGG  GIG   +    ++GA + I        +     + S  +    +  D
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHCD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTVIEIDSVGTFIM 127
           V K ED   +V++TI   GKLDI+          P    +     F+ V++I+  G F++
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
              A + +    +       G I+   S +            +A K AV  +T SL  E 
Sbjct: 123 AKHAARVMIPAKK-------GSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTEL 175

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY---KFGEKWDIAMAALYLA 244
           G +Y IRVN ++P  +           +  R +   + AA          D+A A  YLA
Sbjct: 176 G-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLA 234

Query: 245 SDAA 248
            D +
Sbjct: 235 GDES 238

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 2e-40
 Identities = 53/259 (20%), Positives = 97/259 (37%), Gaps = 20/259 (7%)

Query: 1   MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
           +   F+ ++L+GK  ++TG   GIG E++  L K GA + +  R K  L+  V+    LG
Sbjct: 3   LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 62

Query: 61  IP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
              A  + G +     A + V       G LD+L+     N  +       +  R  +E+
Sbjct: 63  AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 122

Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
           + +   ++   AL  LK+           G I+ +S+     A       SA+K A+D  
Sbjct: 123 NFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 173

Query: 180 TRSLALEWGTD-YAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYK 229
             S+  E+      + +     G I              +     EE   +     A  +
Sbjct: 174 FSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQ 233

Query: 230 FGEKWDIAMAALYLASDAA 248
               +D ++    L  + +
Sbjct: 234 EEVYYDSSLWTTLLIRNPS 252

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  135 bits (340), Expect = 5e-39
 Identities = 59/251 (23%), Positives = 90/251 (35%), Gaps = 27/251 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           LKG+  L+TGG SG+G  +  +    GA +A++ +    L          G   +G+ GD
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVGD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP-----NGFRTVIEIDSVGT 124
           VR  ED  +     +  FGK+D L+  A       A    P       F  V  I+  G 
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119

Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
                  L  L            G +I  IS    Y         +AAK A+  + R LA
Sbjct: 120 IHAVKACLPALVASR--------GNVIFTISNAGFY-PNGGGPLYTAAKHAIVGLVRELA 170

Query: 185 LEWGTDYAIRVNGIAPGPIK--------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
            E      +RVNG+  G I            G   ++   +       +   +  E  + 
Sbjct: 171 FELAPY--VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEY 228

Query: 237 AMAALYLASDA 247
             A ++ A+  
Sbjct: 229 TGAYVFFATRG 239

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  132 bits (333), Expect = 2e-38
 Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 19/239 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKVAL++GG  G+G      +   GA +          ++  A    L   A  +  D
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE---LADAARYVHLD 60

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V +       V++ +  FG L +LVN A    +   ED +   ++ +++++  G F+   
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 120

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             +K +K+ GRG         IINIS+      T      +A K AV  +T+S ALE G 
Sbjct: 121 AVVKPMKEAGRGS--------IINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG- 171

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              IRVN I PG +  T     +  +  ++      A  +  E  +++   +YLASD +
Sbjct: 172 PSGIRVNSIHPGLV-KTPMTDWVPEDIFQT------ALGRAAEPVEVSNLVVYLASDES 223

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  132 bits (332), Expect = 3e-38
 Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 18/248 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
              +V L+TGGGSG+G   +++L   GA ++++      L ++ AA+         +   
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFI 126
            DV         V +T   FG++D   N A       P E  +   F  V+ I+  G F+
Sbjct: 62  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 121

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
              + LK +++           G+++N ++         Q   +AAK  V  +TR+ A+E
Sbjct: 122 GLEKVLKIMRE--------QGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVE 173

Query: 187 WGTDYAIRVNGIAPGPIK------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
           +G  Y IR+N IAPG I           +    P +   +      + ++GE  +IA   
Sbjct: 174 YG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV 232

Query: 241 LYLASDAA 248
            +L SD A
Sbjct: 233 AFLLSDDA 240

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  129 bits (325), Expect = 4e-37
 Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 24/254 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
             GKV L+TG G  IG   +L+L + G AIA++   +  L  A A++   G+ A     D
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
           V   E  +  V+S +  FGK+D L N A       P +D   + F  V+ I+  G F + 
Sbjct: 63  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
               + +     G+        I+N ++               +K A+ ++T + AL+  
Sbjct: 123 KAVSRQMITQNYGR--------IVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 174

Query: 189 TDYAIRVNGIAPGPI--------------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
             Y IRVN I+PG +              K  +      P+ +  +    +   ++G+  
Sbjct: 175 -PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN 233

Query: 235 DIAMAALYLASDAA 248
           +I     +L  D +
Sbjct: 234 EIPGVVAFLLGDDS 247

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  128 bits (323), Expect = 5e-37
 Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 17/239 (7%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK  L+TG  SGIG        + GA++  + R + +L  AVAA   L   AI +  D
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +    V    +  FG+L  + + A       + +L    +  V+ ++  G+F++  
Sbjct: 60  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 119

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
           +A + L++GG    + S  G+             +   H +A K  V  + R+LALE   
Sbjct: 120 KAGEVLEEGGSLVLTGSVAGLGA-----------FGLAHYAAGKLGVVGLARTLALELA- 167

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              +RVN + PG I  T   + L P     +        + G   ++A AAL+L S+ +
Sbjct: 168 RKGVRVNVLLPGLI-QTPMTAGLPPWA-WEQEVGASPLGRAGRPEEVAQAALFLLSEES 224

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  128 bits (323), Expect = 9e-37
 Identities = 47/249 (18%), Positives = 78/249 (31%), Gaps = 17/249 (6%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
           L  K  +      GIG + S +L K      ++  R     +       +  +       
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 69  DV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           DV     ++ ++++   +    +DIL+N A          L  +     I I+  G    
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAG--------ILDDHQIERTIAINFTGLVNT 114

Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
               L +       +     GGII NI +   + A       SA+KAAV S T SLA   
Sbjct: 115 TTAILDF-----WDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
                +    I PG    T  V               +      +  +        A +A
Sbjct: 170 P-ITGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA 227

Query: 248 AVHRDLIHL 256
             +  +  L
Sbjct: 228 NKNGAIWKL 236

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  127 bits (321), Expect = 1e-36
 Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 25/239 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           ++ K  L+     GIG  ++  L + GA + I  R + +L+ +             +  D
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 52

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           +RK  D +           ++DILV  A G      ++L+   F+  I+   +    +  
Sbjct: 53  LRKDLDLL------FEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 106

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             L  +K+ G G+        I+ I++    +        ++A+ A+    ++L+ E   
Sbjct: 107 NYLPAMKEKGWGR--------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA- 157

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            Y I VN +APG   +T  V +L  EE + +    +   +  +  +IA    +L S+ A
Sbjct: 158 PYGITVNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKA 215

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  127 bits (321), Expect = 1e-36
 Identities = 41/242 (16%), Positives = 88/242 (36%), Gaps = 24/242 (9%)

Query: 15  ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
           A++T      G   +L+L + G  +A             A            +      +
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA------ETYPQLKPMSEQ 56

Query: 75  DAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
           +   ++E+  + +G++D+LV+         P +  +   +R  +E   +  F + +    
Sbjct: 57  EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 134 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI 193
            +KK   G         II I++   +         ++A+A   ++  +L+ E G +Y I
Sbjct: 117 QMKKRKSGH--------IIFITSATPFGPWKELSTYTSARAGACTLANALSKELG-EYNI 167

Query: 194 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMAALYLASD 246
            V  I P  +  +       P E      +++A  K        G + ++     +LAS 
Sbjct: 168 PVFAIGPNYL-HSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG 226

Query: 247 AA 248
           + 
Sbjct: 227 SC 228

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 3e-36
 Identities = 52/243 (21%), Positives = 90/243 (37%), Gaps = 21/243 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GKV +LT    GIG   +L   + GA +      ++ L+              G++  
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK--------YPGIQTR 55

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V       ++ +   N   +LD+L N A         D     +   + ++    ++M  
Sbjct: 56  VLDVTKKKQIDQ-FANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             L  +           SG II   S          +   S  KAAV  +T+S+A ++  
Sbjct: 115 AFLPKMLAQ-------KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI- 166

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLAS 245
              IR N + PG +   +   ++       +A +         +F    +IAM  +YLAS
Sbjct: 167 QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLAS 226

Query: 246 DAA 248
           D +
Sbjct: 227 DES 229

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  126 bits (316), Expect = 5e-36
 Identities = 44/243 (18%), Positives = 79/243 (32%), Gaps = 27/243 (11%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIG 65
            + L+TG G GIG  I+L+  +           + +  R    L        + G     
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
           +  D+    D  R+    +  +G +D LVN A         DL+   F   +  +  GTF
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
            +       +++           G I  I++     A  +      +K     +  ++ L
Sbjct: 122 FLTQALFALMERQH--------SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRL 173

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
                  +R+  + PG +  T          +  K  D M A       DIA   +    
Sbjct: 174 YAR-KCNVRITDVQPGAV-YT---------PMWGKVDDEMQA-LMMMPEDIAAPVVQAYL 221

Query: 246 DAA 248
             +
Sbjct: 222 QPS 224

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  126 bits (317), Expect = 6e-36
 Identities = 48/256 (18%), Positives = 82/256 (32%), Gaps = 24/256 (9%)

Query: 8   DILKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHS--LGIP 62
           D L   V +LTG   G G  ++ QL +    G+ + +  R +++LR     L +    + 
Sbjct: 2   DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK 61

Query: 63  AIGLEGDVRKREDAVRVV----ESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRT 115
            +    D+       R++    E       +  +L+N AA    V               
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175
              ++      +    L   +              ++NIS+              A KAA
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLS------KTVVNISSLCALQPYKGWGLYCAGKAA 175

Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIK---DTAGVSKLAPEEIRSKATDYMAAYKFGE 232
            D + + LA E     ++RV   APGP+               E+RSK     +     +
Sbjct: 176 RDMLYQVLAAEE---PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVD 232

Query: 233 KWDIAMAALYLASDAA 248
               A   L L     
Sbjct: 233 CGTSAQKLLGLLQKDT 248

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  125 bits (314), Expect = 1e-35
 Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 14/239 (5%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
            +GK+AL+TG   GIG  I+  L   GA +      +   ++       LG    GL  +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDY---LGANGKGLMLN 58

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V        V+E     FG++DILVN A          +    +  +IE +    F +  
Sbjct: 59  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 118

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
             ++ + K           G II I + +       Q + +AAKA +   ++SLA E   
Sbjct: 119 AVMRAMMKKR--------HGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVA- 169

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              I VN +APG I+     +    ++ R+     + A + G   +IA A  +LASD A
Sbjct: 170 SRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA 226

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  124 bits (313), Expect = 3e-35
 Identities = 72/253 (28%), Positives = 103/253 (40%), Gaps = 23/253 (9%)

Query: 9   ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIGL 66
           +LKGKVA++TG  SGIG  I+  L   GA I + G         V A      G+  +  
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
             D+ K E    +V++ +   G++DILVN A        ED     +  ++ ++    F 
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
               AL ++KK G         G IINI++     A+  +    AAK  V   T+  ALE
Sbjct: 121 GTAAALPHMKKQGF--------GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALE 172

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWD 235
                 I  N I PG +  T  V K           D   A +           F     
Sbjct: 173 TA-GQGITANAICPGWV-RTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ 230

Query: 236 IAMAALYLASDAA 248
           +   A++LASDAA
Sbjct: 231 LGGTAVFLASDAA 243

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  123 bits (310), Expect = 4e-35
 Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 22/239 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              +  L+TGG  GIG  I+ +L   G  +A+  R     +              G+E D
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVD 53

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V   +   R   +   H G +++LV+ A  +       ++   F  VI  +  G F +  
Sbjct: 54  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQ 113

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A + +++   G+        +I I +         Q + +A+KA V  + RS+A E  +
Sbjct: 114 RASRSMQRNKFGR--------MIFIGSVSGLWGIGNQANYAASKAGVIGMARSIAREL-S 164

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
              +  N +APG I DT     L  E I+  A  ++ A + G   ++A    +LAS+ A
Sbjct: 165 KANVTANVVAPGYI-DTDMTRAL-DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDA 221

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  123 bits (309), Expect = 8e-35
 Identities = 63/245 (25%), Positives = 101/245 (41%), Gaps = 17/245 (6%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           KVAL+TG G GIG  I+L+L K G A+AI        ++  + ++  G  A+ ++ DV  
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
           R+     VE      G  D++VN A      P E ++P     V  I+  G       A+
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           +  KK G G         IIN  +   +         S++K AV  +T++ A +      
Sbjct: 122 EAFKKEGHGG-------KIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLA-PLG 173

Query: 193 IRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           I VNG  PG +         +  +  +        ++    +   +  E  D+A    YL
Sbjct: 174 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 233

Query: 244 ASDAA 248
           AS  +
Sbjct: 234 ASPDS 238

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  122 bits (307), Expect = 2e-34
 Identities = 68/248 (27%), Positives = 102/248 (41%), Gaps = 20/248 (8%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           L GK AL+TG   GIG   +    + GA +AI        R+  A    +G  A  +  D
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAE---IGPAACAIALD 59

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V  +    R V   ++ +G +DILVN AA   L P  +++   +  +  I+  GT  M  
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
              + +  GGRG         IIN+++              A KAAV S+T+S  L    
Sbjct: 120 AVARAMIAGGRGG-------KIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI- 171

Query: 190 DYAIRVNGIAPGP---------IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
            + I VN IAPG              A    L   E + +    +   + G   D+   A
Sbjct: 172 RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMA 231

Query: 241 LYLASDAA 248
           ++LA+  A
Sbjct: 232 IFLATPEA 239

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  118 bits (296), Expect = 5e-33
 Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 13/238 (5%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
            V ++TG   GIG  I+L LGK G  + +   R           + + G  AI   GDV 
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
           K  D   ++++ I+ +G +D++VN A          +  + +  VI+++  G F+    A
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121

Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
            K + K           G IINI++ +       Q + +AAKA V   +++ A E     
Sbjct: 122 TKIMMKKR--------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGA-SR 172

Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAA 248
            I VN + PG I     ++    E++  K    +   + G+  ++A    +LA S AA
Sbjct: 173 NINVNVVCPGFIAS--DMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAA 228

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 1e-32
 Identities = 53/267 (19%), Positives = 85/267 (31%), Gaps = 52/267 (19%)

Query: 13  KVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
            VAL+TGG  GIG  I   L +     + +  R  T  ++AV  L + G+     + D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
             +    + +     +G LD+LVN A   F V             ++ +  GT  +C E 
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 123

Query: 132 LKYLKKGGRGQASSSSGGI-------------------------------IINISATLHY 160
           L  +K  GR    SS   +                               + +    +H 
Sbjct: 124 LPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ 183

Query: 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYA---IRVNGIAPGPIKDTAGVSKLAPEEI 217
              W        K  V  ++R  A +         I +N   PG ++             
Sbjct: 184 KEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR------------- 230

Query: 218 RSKATDYMAAYKFGEKWDIAMAALYLA 244
               TD           + A   +YLA
Sbjct: 231 ----TDMAGPKATKSPEEGAETPVYLA 253

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  112 bits (282), Expect = 6e-31
 Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 19/240 (7%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           + AL+TGG SG+G   +L L   G  + ++  R+             G   I +EGDV +
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTR 49

Query: 73  REDAVRVVESTINHFGKLDILVNA---AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
            ED  R V           ++  A    A   L          FR V+E++ +GTF +  
Sbjct: 50  EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 109

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
            A   +++      +    G+I+N ++   +     Q   +A+K  V ++T   A E   
Sbjct: 110 LAAWAMRE--NPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA- 166

Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV 249
            + IRV  +APG   DT  +  L  +   S A       + G   + A   L++  +  +
Sbjct: 167 GWGIRVVTVAPGLF-DTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPML 225

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  113 bits (282), Expect = 1e-30
 Identities = 52/249 (20%), Positives = 91/249 (36%), Gaps = 18/249 (7%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIGLEGDVR 71
            A++TGG   IG  I+++L + G  + +  R        + A    +    A+  +GD+ 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 72  K----REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
                 +    +++ +   FG+ D+LVN A+  +  P             +        +
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 128 CHEALK--------YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
                         + ++ G G A  S    ++N+   +           + AK A+  +
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
           TR+ ALE      IRVN +APG       + +   EE R K               IA A
Sbjct: 183 TRAAALELA-PRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV---PLGQSEASAAQIADA 238

Query: 240 ALYLASDAA 248
             +L S  A
Sbjct: 239 IAFLVSKDA 247

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  112 bits (280), Expect = 2e-30
 Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 18/245 (7%)

Query: 10  LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
           L GK AL+ G  +   +GF I+ +L + GA +A+  + + +   A     +LG   +   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLF-R 64

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP----AEDLSPNGFRTVIEIDSVG 123
            DV + E+   +       FG LD LV+A A            D     +   +E+ +  
Sbjct: 65  ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124

Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
              +   A   L++GG           I+ ++             ++ AKAA+++  R L
Sbjct: 125 LVAVARRAEPLLREGGG----------IVTLTYYASEKVVPKYNVMAIAKAALEASVRYL 174

Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
           A E G    +RVN I+ GP++  A  S     ++  +        +   + ++    L+L
Sbjct: 175 AYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFL 233

Query: 244 ASDAA 248
            S  A
Sbjct: 234 LSPLA 238

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 2e-30
 Identities = 48/250 (19%), Positives = 99/250 (39%), Gaps = 7/250 (2%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---HSLGIPAIGL 66
           +KG VA++TGG SG+G   + +L   GA+  ++    +   +    L          +  
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 62

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           E DV+      +     ++       +  A+    L   +  +   F+ V++++ +GTF 
Sbjct: 63  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 122

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           +       + +           G+IIN ++   +     Q   SA+K  +  +T  +A +
Sbjct: 123 VIRLVAGEMGQ--NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
                 IRV  IAPG    T  ++ L  +     A+      + G+  + A     +  +
Sbjct: 181 LA-PIGIRVMTIAPGLF-GTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN 238

Query: 247 AAVHRDLIHL 256
             ++ ++I L
Sbjct: 239 PFLNGEVIRL 248

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  109 bits (272), Expect = 1e-29
 Identities = 37/240 (15%), Positives = 68/240 (28%), Gaps = 30/240 (12%)

Query: 11  KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
           + +  L+ GG   +G             +A +   +    SA   +         +    
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK--------MTDSF 52

Query: 71  RKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
            ++ D V      +    K+D ++  A G                 + +     + I  H
Sbjct: 53  TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSH 112

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG- 188
            A K+LK+GG    + +   +            T   I    AK AV  + +SLA +   
Sbjct: 113 LATKHLKEGGLLTLAGAKAALD----------GTPGMIGYGMAKGAVHQLCQSLAGKNSG 162

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
                    + P  + DT    K  PE   S          +     +        +   
Sbjct: 163 MPSGAAAIAVLPVTL-DTPMNRKSMPEADFS---------SWTPLEFLVETFHDWITGNK 212

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =   99 bits (248), Expect = 6e-26
 Identities = 50/247 (20%), Positives = 88/247 (35%), Gaps = 19/247 (7%)

Query: 9   ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
            L GK  L+TG  S   I + I+  + + GA +A   +    L+  V    +     I L
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVL 60

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN-----GFRTVIEIDS 121
           + DV +      +       + K D  V++         +    N     GF+   +I S
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
                M       L  G            ++ +S      A      +  AKA++++  R
Sbjct: 121 YSFVAMAKACRSMLNPGS----------ALLTLSYLGAERAIPNYNVMGLAKASLEANVR 170

Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
            +A   G    +RVN I+ GPI+  A        ++ +         +     D+  +A 
Sbjct: 171 YMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA 229

Query: 242 YLASDAA 248
           +L SD +
Sbjct: 230 FLCSDLS 236

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 99.2 bits (246), Expect = 1e-25
 Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 19/210 (9%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
           +     ++TG   GIG  +  QL K      I    R         +           L 
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLP 57

Query: 68  GDVRKREDAVRVVESTINHFGK--LDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGT 124
             V   +     V       G   L +L+N A          + +       +++++   
Sbjct: 58  LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 125 FIMCHEALKYLKKGGRGQASSSSG----------GIIINISATLHYTATWYQIHVSAAKA 174
            ++  + L  LK     ++                 + +I+     +A +  +    +KA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIK 204
           A++   R+LA++   D  + V    PG ++
Sbjct: 178 AINMFGRTLAVDLK-DDNVLVVNFCPGWVQ 206

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 94.4 bits (233), Expect = 1e-23
 Identities = 53/242 (21%), Positives = 85/242 (35%), Gaps = 10/242 (4%)

Query: 9   ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
            LKGK  L+ G      I + I+      GA +A     ++ L   V  +          
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVY 60

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           E DV K E    +  S     G LD +V++ A       E       ++        +  
Sbjct: 61  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
              E    LK          +G  ++ +S         +   +  AKAA++S  R LA++
Sbjct: 121 SLIELTNTLKPLLN------NGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVD 174

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
            G  + IRVN ++ GPI+  A         I           K     ++  A +YL S 
Sbjct: 175 LG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSS 233

Query: 247 AA 248
            +
Sbjct: 234 LS 235

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 91.5 bits (226), Expect = 8e-23
 Identities = 47/242 (19%), Positives = 76/242 (31%), Gaps = 36/242 (14%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
           GKV ++ GG   +G  I     K+G  +  +         +           I ++G+  
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS----------NILVDGNKN 51

Query: 72  KREDAVRVVEST--INHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
             E    ++E T       ++D +   A G      +          +I+     + I  
Sbjct: 52  WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 111

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW- 187
             A  +LK GG           +    A      T   I    AKAAV  +T SLA +  
Sbjct: 112 KLATTHLKPGGL----------LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDS 161

Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL-YLASD 246
           G      V  I P  + DT    K  P    S          +     I+   L +    
Sbjct: 162 GLPDNSAVLTIMPVTL-DTPMNRKWMPNADHS---------SWTPLSFISEHLLKWTTET 211

Query: 247 AA 248
           ++
Sbjct: 212 SS 213

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.5 bits (226), Expect = 2e-22
 Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 21/237 (8%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGR------RKTVLRSAVAALHSLGIPAIGL 66
            V L+TG  SGIG  ++++L    +    +         +  L  A  AL         L
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 67  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           + DVR  +      E         D+LV  A    L P E L  +   +V++++ VGT  
Sbjct: 63  QLDVRDSKSVAAARERVTEGRV--DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
           M    L  +K+ G         G ++   +        +     A+K A++ +  SLA+ 
Sbjct: 121 MLQAFLPDMKRRGS--------GRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVL 172

Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAAL 241
               + + ++ I  GP+  TA + K+  +PEE+  + TD    ++F +    +    
Sbjct: 173 LL-PFGVHLSLIECGPV-HTAFMEKVLGSPEEVLDR-TDIHTFHRFYQYLAHSKQVF 226

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 89.3 bits (220), Expect = 1e-21
 Identities = 50/268 (18%), Positives = 90/268 (33%), Gaps = 39/268 (14%)

Query: 14  VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----------------- 56
           VAL+TG    +G  I+  L   G A+ +   R     +A++A                  
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 57  --HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR 114
              +  +        V        +V +   H+G+ D+LVN A+  +  P      +G  
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 115 T--------------VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160
                          +   +++  + +       +           +   IIN+   +  
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHR--GTNYSIINMVDAMTN 181

Query: 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 220
                    + AK A++ +TRS ALE      IRVNG+ PG       +     E  RSK
Sbjct: 182 QPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDDMPPAVWEGHRSK 240

Query: 221 ATDYMAAYKFGEKWDIAMAALYLASDAA 248
                   +     +++   ++L S  A
Sbjct: 241 VP---LYQRDSSAAEVSDVVIFLCSSKA 265

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 81.1 bits (199), Expect = 6e-19
 Identities = 39/250 (15%), Positives = 66/250 (26%), Gaps = 31/250 (12%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
            + +++G  +GIG      L   G  I  +  R     + V A             D+  
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD----AEVIA-------------DLST 44

Query: 73  REDAVRVVESTINHFGK-LDILVNAAAGNFLVPAED------------LSPNGFRTVIEI 119
            E   + +   +    K +D LV  A                      L       + + 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKG 104

Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDS 178
                 ++   A  +L       A +   G      A + H       +  + +K A+  
Sbjct: 105 HQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTV 164

Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
             R  A  WG                         P    S A       +  E  ++A 
Sbjct: 165 AVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMAS 224

Query: 239 AALYLASDAA 248
              +L S AA
Sbjct: 225 VIAFLMSPAA 234

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 75.1 bits (183), Expect = 1e-16
 Identities = 37/230 (16%), Positives = 76/230 (33%), Gaps = 15/230 (6%)

Query: 13  KVALLTGGGSGIGFEIS---LQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
              L+TG   G+G  +    L L +    +    R +   +  +  L         LE D
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEID 61

Query: 70  VRKRE--DAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
           +R  +  D +      +     L++L  NA           +        ++ ++V   +
Sbjct: 62  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121

Query: 127 MCHEALKYLKKGGRGQASSSSGGIIIN------ISATLHYTATWYQIHVSAAKAAVDSIT 180
           +    L  LKK  +   S   G           I  ++             +K+A+++ T
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 230
           +SL+++      I    + PG +  T      AP ++ +     +     
Sbjct: 182 KSLSVDLY-PQRIMCVSLHPGWV-KTDMGGSSAPLDVPTSTGQIVQTISK 229

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 67.9 bits (164), Expect = 5e-14
 Identities = 44/254 (17%), Positives = 78/254 (30%), Gaps = 21/254 (8%)

Query: 9   ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIG 65
           +L GK  L++G    S I F I+    + GA + + G  +  L   +   L +       
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 66  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
              +          V   I    KLD +V++            +  G     +       
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFM------PQTGMGINPFFDAPYADVS 116

Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
              H +        +      + G  I         A      ++ AK+A++S+ R +A 
Sbjct: 117 KGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAR 176

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKW 234
           E    Y +R N +A GPI+  A  + +                +             +  
Sbjct: 177 EA-GKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT 235

Query: 235 DIAMAALYLASDAA 248
            +A     L SD  
Sbjct: 236 PVAKTVCALLSDWL 249

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 64.4 bits (155), Expect = 1e-12
 Identities = 51/273 (18%), Positives = 79/273 (28%), Gaps = 41/273 (15%)

Query: 10  LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----------- 56
           L+GK A + G     G G+ ++  L   GA I +      +     +             
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 57  ---------------------HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN 95
                                                        E     FG +DILV+
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 96  AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155
           + A    V    L  +    +         I                  +  G  I    
Sbjct: 126 SLANGPEVSKPLLETSRKGYLA-------AISASSYSFVSLLSHFLPIMNPGGASISLTY 178

Query: 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 215
                    Y   +S+AKAA++S TR LA E G    IRVN I+ GP+   A  +    +
Sbjct: 179 IASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID 238

Query: 216 EIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
            +   + +     K     ++  AA +L S  A
Sbjct: 239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLA 271

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 60.0 bits (144), Expect = 2e-11
 Identities = 34/249 (13%), Positives = 69/249 (27%), Gaps = 31/249 (12%)

Query: 12  GKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLG--IPAIGLEG 68
               L+TGG  G+G +I+  L + GA  + ++ R       A   +  L        +  
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 69  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
                 ++VR +   I     L  + +AAA       + L+            +G   + 
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
               +                  +  S+             +   A +D + +    +  
Sbjct: 129 ELTRE------------LDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDG- 175

Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 248
               +    +A G    +        +  R      M         + A  AL      A
Sbjct: 176 ----LPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPP-------ETACRAL----QNA 220

Query: 249 VHRDLIHLL 257
           + R  +  +
Sbjct: 221 LDRAEVCPI 229

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 57.8 bits (138), Expect = 8e-11
 Identities = 28/206 (13%), Positives = 58/206 (28%), Gaps = 10/206 (4%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           +VALL G G  +G  ++L+L   G  I +  RR+    +  A    +   A         
Sbjct: 2   RVALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
             +A  +   TI     +D   +                  R                  
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           + L+      A  +             +     +          D  ++ + +   ++  
Sbjct: 121 EVLESEKVVSALHTIPA--------ARFANLDEKFDWDVPVCGDDDESKKVVMSLISE-I 171

Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIR 218
             +  +  GP+ ++  V  L P  + 
Sbjct: 172 DGLRPLDAGPLSNSRLVESLTPLILN 197

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 54.5 bits (130), Expect = 8e-10
 Identities = 25/183 (13%), Positives = 52/183 (28%), Gaps = 20/183 (10%)

Query: 10  LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
           +KGK A++  G   +G   +  L   GA + + GR+    ++A          ++     
Sbjct: 21  VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA--------DSVNKRFK 72

Query: 70  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
           V           S          +  A A    +  E L    ++    I+ V  +    
Sbjct: 73  VNVTAAETADDASRAEAVKGAHFVFTAGA----IGLELLPQAAWQNESSIEIVADYNAQP 128

Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
                      G  ++  G       A          + +   +A +  +  S    +  
Sbjct: 129 PLGI------GGIDATDKGKEYGGKRAFGALGIG--GLKLKLHRACIAKLFESSEGVFDA 180

Query: 190 DYA 192
           +  
Sbjct: 181 EEI 183

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.1 bits (133), Expect = 9e-10
 Identities = 41/316 (12%), Positives = 81/316 (25%), Gaps = 88/316 (27%)

Query: 12  GKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRR----------------KTVLRSAV 53
             +  + G G   G G+ I+ +L K    I                        ++    
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 54  AALHSLGI----------------PAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-- 95
             ++ L +                       ++ +      V       +GK+++LV+  
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 96  AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155
           A A        + S  G+   +   S     +C   +  +K      + +      +   
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG 181

Query: 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG------- 208
                ++    +            TR LA   G +Y IR+N I+ GP+K  A        
Sbjct: 182 YGGGMSSAKAALES---------DTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLN 232

Query: 209 ------------------------------------VSKLAPEEIRSKATDYMAAYKFGE 232
                                                +    +     +  Y    +   
Sbjct: 233 NTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLL 292

Query: 233 KWDIAMAALYLASDAA 248
             DI   A +L S  +
Sbjct: 293 STDIGSVASFLLSRES 308

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 48/247 (19%), Positives = 82/247 (33%), Gaps = 16/247 (6%)

Query: 16  LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL-EGDVRKRE 74
           L+TGG   IG    +QL ++G  + I+       RS +  +  LG       EGD+R   
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 75  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
                    I H   +D +++ A     + A   S        + +  GT  +       
Sbjct: 64  LMTE-----ILHDHAIDTVIHFAG----LKAVGESVQKPLEYYDNNVNGTLRLISAMRAA 114

Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
             K     +S++  G    I     +     Q     +K  V+ I               
Sbjct: 115 NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTD---LQKAQPDWS 171

Query: 195 VNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM-AALYLASDAAVHR 251
           +  +          +G     P+ I +    Y+A    G +  +A+    Y   D    R
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231

Query: 252 DLIHLLD 258
           D IH++D
Sbjct: 232 DYIHVMD 238

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 32/226 (14%), Positives = 66/226 (29%), Gaps = 15/226 (6%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
            VAL+TG     G  ++  L + G  +  + RR +   +     H    P   +EG+++ 
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIE-HLYKNPQAHIEGNMKL 60

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
               +      +    ++                 +S +      ++D VGT  +     
Sbjct: 61  HYGDLTDSTCLVKIINEVKP--TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVK 118

Query: 133 KYLKKGGRG--QASSSS-----GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
                      QAS+S        I    +   +   + Y     AAK     I  +   
Sbjct: 119 TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR-SPY----GAAKLYAYWIVVNFRE 173

Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
            +       +      P +    V++     +       +  +  G
Sbjct: 174 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG 219

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.8 bits (87), Expect = 9e-04
 Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 34/200 (17%)

Query: 16  LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL-EGDVRKRE 74
           L+TGG   IG  +   + K+     +   + T   +  +               D+    
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSA 63

Query: 75  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
           +  R+ E       + D +++ AA    V      P  F   IE + VGT+ +   A KY
Sbjct: 64  EITRIFEQ-----YQPDAVMHLAA-ESHVDRSITGPAAF---IETNIVGTYALLEVARKY 114

Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---------------------SAAK 173
               G  + ++       +IS    Y    +   V                     SA+K
Sbjct: 115 WSALGEDKKNNF---RFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASK 171

Query: 174 AAVDSITRSLALEWGTDYAI 193
           A+ D + R+    +G    +
Sbjct: 172 ASSDHLVRAWRRTYGLPTIV 191

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 37/246 (15%), Positives = 76/246 (30%), Gaps = 23/246 (9%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
           + AL+TG     G  ++  L + G  +  +  R++           +       +GD+  
Sbjct: 1   RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 73  REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
                R V              +    ++  P      +G         +G   +     
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDG---------LGVTHLLEAIR 111

Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
           ++  +    QAS+S    +I        T  + +     AK     IT +    +G   +
Sbjct: 112 QFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHAS 171

Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRD 252
             +      P++          E +  K TD +A  K G++ ++ +       +    RD
Sbjct: 172 SGILFNHESPLRG--------IEFVTRKVTDAVARIKLGKQQELRL------GNVDAKRD 217

Query: 253 LIHLLD 258
                D
Sbjct: 218 WGFAGD 223

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.8 bits (81), Expect = 0.004
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 10/126 (7%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL-EGDVR 71
           K+ L+TGG   IG    ++L ++G    +          +VA L  L    I   E D+ 
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 72  KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
            R+   +     +    K+D  V   AG   V      P  +     +   GT ++    
Sbjct: 62  DRKGLEK-----VFKEYKIDS-VIHFAGLKAVGESTQIPLRYYHNNIL---GTVVLLELM 112

Query: 132 LKYLKK 137
            +Y   
Sbjct: 113 QQYNVS 118

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 26/231 (11%)

Query: 13  KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHSLGIPAIGLE 67
           KVAL+TG     G  ++  L + G  +  + RR +      +       H+         
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 68  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
           GD+    +  R++        + D + N  A    +    +S        ++D++GT  +
Sbjct: 62  GDLSDTSNLTRILREV-----QPDEVYNLGA----MSHVAVSFESPEYTADVDAMGTLRL 112

Query: 128 CHEALKY-LKKGGR-GQASSSS-----GGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
                   L+K  R  QAS+S        I    +   +   + Y    + AK     IT
Sbjct: 113 LEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SPY----AVAKLYAYWIT 167

Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
            +    +G      +      P +    V++     I + A    +    G
Sbjct: 168 VNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG 218

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	259
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.88
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.84
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.78
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.78
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.78
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.77
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.76
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.76
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.75
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.73
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.72
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.71
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.69
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.69
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.69
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.69
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.68
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.67
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.66
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.65
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.63
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.62
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.6
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.39
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.37
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.33
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.25
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.19
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.18
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.15
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.11
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.24
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.12
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.12
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.09
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.05
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.03
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.02
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.99
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.88
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.85
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.85
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.83
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.83
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.8
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.79
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.78
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.74
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.7
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.68
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.61
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.6
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.55
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.55
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.51
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.5
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.48
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.42
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.42
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.38
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.37
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.32
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.29
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.29
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.28
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.26
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.23
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.23
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.23
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.22
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.22
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.19
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.19
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.18
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.17
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.15
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.13
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.13
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.06
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.04
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.03
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.03
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.01
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.0
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.0
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.99
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.96
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.95
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.91
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.84
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.81
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.73
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.72
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.7
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.68
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.68
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.67
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.67
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.59
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.58
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.49
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	96.43
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.41
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.34
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.25
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.08
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.98
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.95
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.92
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.9
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.89
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.72
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.71
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.68
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.67
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.65
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.56
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.54
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.52
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.51
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.45
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.45
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.42
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.35
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.33
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.25
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.22
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.2
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.15
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.14
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.13
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.05
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.03
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.03
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.93
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.92
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.86
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.78
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.75
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.68
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.67
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.62
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.59
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.59
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.55
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	94.49
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.47
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.34
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.3
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.3
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	94.21
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.15
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.1
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.06
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.97
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.95
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.85
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.82
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.79
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	93.79
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.77
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.73
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	93.71
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.69
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.63
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.56
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.54
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.49
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.48
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	93.4
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.4
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.37
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.33
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.86
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	92.83
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.83
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.72
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.69
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.68
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	92.5
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	92.48
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.47
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.45
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.41
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.4
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.33
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.27
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.2
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	92.19
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	91.88
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.88
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.68
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	91.48
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.39
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	91.34
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	91.22
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.2
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.19
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	90.94
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	90.72
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.59
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.59
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	90.54
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.01
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	89.68
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	89.58
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.48
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.48
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	89.37
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	89.32
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.16
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	89.11
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.56
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	88.42
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	88.25
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	88.12
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.07
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	88.04
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	87.89
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	87.6
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.57
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	87.5
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.29
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	87.26
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	87.23
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.12
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.09
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	86.9
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	86.8
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	86.67
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	86.61
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	86.6
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	86.58
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	86.4
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	86.39
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	86.3
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	85.95
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	85.71
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	85.52
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	85.22
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	85.07
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	85.02
d1vbka1	132	Hypothetical protein PH1313, C-terminal domain {Ar	84.94
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.6
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	84.58
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	84.5
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.48
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	84.41
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	84.23
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	84.2
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	84.08
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	83.88
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	83.87
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	83.83
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	83.64
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	83.41
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	83.08
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	82.9
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	82.8
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	82.74
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	82.57
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	82.51
d1t5la2	181	Nucleotide excision repair enzyme UvrB {Bacillus c	82.51
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	82.18
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	81.84
d1jyea_	271	Lac-repressor (lacR) core (C-terminal domain) {Esc	81.75
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	81.3
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	81.26
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	81.26
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	81.25
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	81.21
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	81.17
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	81.04
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	80.73
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	80.26
d1qh8b_	519	Nitrogenase iron-molybdenum protein, beta chain {K	80.15
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.13

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3e-60  Score=385.44  Aligned_cols=243  Identities=29%  Similarity=0.330  Sum_probs=226.9

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..+.|+||+++||||++|||+++|+.|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999999999999999988888899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+.
T Consensus        84 ~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~IVnisS~~~~~~~~~  155 (251)
T d2c07a1          84 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRY--------GRIINISSIVGLTGNVG  155 (251)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTT
T ss_pred             hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCC--------eEEEEECCHHhcCCCCC
Confidence            9999999999999988889999999999999999999999999999999998875        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+|+|+.|++ ++|||||+|+||+++|++... . +++..+.+.+..|++|+++|||||++++||+|
T Consensus       156 ~~~Y~asKaal~~ltr~lA~el~-~~gIrVN~V~PG~v~T~~~~~-~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S  232 (251)
T d2c07a1         156 QANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTDK-I-SEQIKKNIISNIPAGRMGTPEEVANLACFLSS  232 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC------C-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEccCCEecccccc-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999 999999999999999876543 2 45667788888999999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.++|+|||.|.+|
T Consensus       233 ~~s~~itG~~i~vD  246 (251)
T d2c07a1         233 DKSGYINGRVFVID  246 (251)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             chhCCCcCcEEEEC
Confidence            99999999999998

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.4e-60  Score=385.85  Aligned_cols=243  Identities=32%  Similarity=0.457  Sum_probs=226.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++|+||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++. ..+.++.++.+|++|+++++++++++.+.
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999998888875 44778999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCcc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~  165 (259)
                      +|+||+||||||+...+++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||+++|..+. .+.+.
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~Ii~i~S~~~~~~~~~~  152 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDN--------PSIINIGSLTVEEVTMPN  152 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSS--------CEEEEECCGGGTCCCSSS
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccc--------ccccccccchhccccCcc
Confidence            999999999999988899999999999999999999999999999999998875        999999997664 57778


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+++|+|+|+.|++ ++|||||+|+||+++|++......+++..+.+.+..|++|+++|||||++++||+|
T Consensus       153 ~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S  231 (251)
T d1vl8a_         153 ISAYAASKGGVASLTKALAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLAS  231 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS
T ss_pred             ccchHHHHHhHHHHHHHHHHHhc-ccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            89999999999999999999999 99999999999999988766555566777788888999999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.++|+|||.|.+|
T Consensus       232 ~~a~~itG~~i~vD  245 (251)
T d1vl8a_         232 EEAKYVTGQIIFVD  245 (251)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             chhCCCcCcEEEeC
Confidence            99999999999998

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.7e-60  Score=384.07  Aligned_cols=241  Identities=30%  Similarity=0.430  Sum_probs=226.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.|+||+++||||++|||+++|++|+++|++|++++|+.++++++.+++++.+.++.++++|++++++++++++++.+.|
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||+....++ +.+.++|++.+++|+.++++++|+++|+|.+++.        |+||++||..+..+.+...
T Consensus        87 g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------g~Ii~isS~~~~~~~~~~~  157 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGG--------GVILTITSMAAENKNINMT  157 (255)
T ss_dssp             SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTCCCTTCH
T ss_pred             CCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccc--------cccccccccchhccccccc
Confidence            999999999998777666 7899999999999999999999999999998875        8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++..... +++..+.+.+..|++|+++|||||++++||+|+.
T Consensus       158 ~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~-~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~  235 (255)
T d1fmca_         158 SYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA  235 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGG
T ss_pred             cchhHHHHHHHHHHHHHHHhC-ccCeEEEEeeeCcCcChHhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999 99999999999999976654444 4566777788899999999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ++|+|||.|.+|
T Consensus       236 s~~itG~~i~vD  247 (255)
T d1fmca_         236 ASWVSGQILTVS  247 (255)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hcCCcCCEEEEC
Confidence            999999999998

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=8.5e-60  Score=384.44  Aligned_cols=244  Identities=29%  Similarity=0.385  Sum_probs=227.8

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +++|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             cC-CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           87 FG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        87 ~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      ++ ++|++|||||+....++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+.
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~Ii~isS~~~~~~~~~  154 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASER--------GNVVFISSVSGALAVPY  154 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSS--------EEEEEECCGGGTSCCTT
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcc--------ccccccccccccccccc
Confidence            87 7999999999988889999999999999999999999999999999998875        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh---HHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ...|+++|+|+++|+|+++.|++ ++|||||+|+||+++|++.......   ++..+.+.+..|++|+++|||||++++|
T Consensus       155 ~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~f  233 (259)
T d2ae2a_         155 EAVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAF  233 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHhC-cCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999 9999999999999998765433332   3444567788999999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.++|+|||.|.+|
T Consensus       234 L~S~~s~~itG~~i~VD  250 (259)
T d2ae2a_         234 LCFPAASYVTGQIIYVD  250 (259)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCchhCCCcCcEEEEC
Confidence            99999999999999998

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=4.3e-60  Score=386.27  Aligned_cols=244  Identities=31%  Similarity=0.469  Sum_probs=228.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh-hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+. +.++++.++++..+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            369999999999999999999999999999999999985 4678888999888889999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|+||+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.       +++||++||..+..+.+..
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-------g~~Iv~isS~~~~~~~~~~  155 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLF  155 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTC
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccc-------cccccccccchhcccCccc
Confidence            999999999999988889999999999999999999999999999999988765       3569999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++......+++..+.+.+..|++|+++|||||++++||+|+
T Consensus       156 ~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~  234 (261)
T d1geea_         156 VHYAASKGGMKLMTETLALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASS  234 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             cccccCCccchhhHHHHHHHhh-hhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999 999999999999999887655555567777888899999999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .++|+|||.|.+|
T Consensus       235 ~s~~itG~~i~vD  247 (261)
T d1geea_         235 EASYVTGITLFAD  247 (261)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             hhcCCcCCeEEEC
Confidence            9999999999998

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-59  Score=380.24  Aligned_cols=237  Identities=27%  Similarity=0.297  Sum_probs=221.0

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +|+||+++||||++|||+++|+.|+++|++|++++|+++.++++.+++.   .+...+.+|++|+++++++++++.+.+|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            5899999999999999999999999999999999999999998888874   3578899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||....+++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+....
T Consensus        78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~II~isS~~~~~~~~~~~~  149 (243)
T d1q7ba_          78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRH--------GRIITIGSVVGTMGNGGQAN  149 (243)
T ss_dssp             SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTTCHH
T ss_pred             CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCC--------CEeeeecchhhcCCCCCCHH
Confidence            9999999999988899999999999999999999999999999999998875        99999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.. ... ++..+.+.+..|++|+++|||||++++||+|+.+
T Consensus       150 Y~asKaal~~lt~~lA~ela-~~gIrVN~I~PG~i~T~~~~-~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s  226 (243)
T d1q7ba_         150 YAAAKAGLIGFSKSLAREVA-SRGITVNVVAPGFIETDMTR-ALS-DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA  226 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-TSC-HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecceEechhhh-hhh-hhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence            99999999999999999999 99999999999999976543 333 3445667778999999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      +|+|||.|.+|
T Consensus       227 ~~itGq~i~vd  237 (243)
T d1q7ba_         227 AYITGETLHVN  237 (243)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCcCCeEEEC
Confidence            99999999998

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.1e-59  Score=382.53  Aligned_cols=242  Identities=25%  Similarity=0.390  Sum_probs=226.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|+||+++||||++|||+++++.|+++|++|++++|+.+.++++.+++++.+.++..+.||++|+++++++++++.+.+|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             CccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        89 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ++|+||||||... .+++.+.+.++|++.+++|+.++++++|+++|+|.+++.        |+||++||..+..+.+...
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~--------G~II~isS~~~~~~~~~~~  153 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNY--------GRIVNTASMAGVKGPPNMA  153 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHSCCTTBH
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcC--------CCCCeeechhhccCCcchH
Confidence            9999999999764 478999999999999999999999999999999998775        9999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCccc--------------CCCChHHHHHHhhhhccCCCCCCH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV--------------SKLAPEEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~  233 (259)
                      .|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++..              ....+++..+.+....|++|+++|
T Consensus       154 ~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p  232 (260)
T d1zema1         154 AYGTSKGAIIALTETAALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCG
T ss_pred             HHHHHHHHHHHHHHHHHHHhh-hhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCH
Confidence            999999999999999999999 99999999999999987532              123356667778888999999999


Q ss_pred             HHHHHHHHHhcCccCCcccccccccC
Q 024976          234 WDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ||||++++||+|+.++|+|||.|.+|
T Consensus       233 edvA~~v~fL~S~~s~~itG~~i~VD  258 (260)
T d1zema1         233 NEIPGVVAFLLGDDSSFMTGVNLPIA  258 (260)
T ss_dssp             GGSHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHhCchhcCccCCeEEeC
Confidence            99999999999999999999999998

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=3.1e-59  Score=378.55  Aligned_cols=240  Identities=30%  Similarity=0.369  Sum_probs=209.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+..+  ...+.++..+.++.++.+|++|+++++++++++.+.||
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999998653  34455666788899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||+....++.+.++++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+....
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~Iv~isS~~~~~~~~~~~~  151 (247)
T d2ew8a1          80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGW--------GRIINLTSTTYWLKIEAYTH  151 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGGSCCSSCHH
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCC--------CCccccccchhcccCccccc
Confidence            9999999999988899999999999999999999999999999999998875        99999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++......++..........|.+|+++|||||++++||+|+.+
T Consensus       152 Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s  230 (247)
T d2ew8a1         152 YISTKAANIGFTRALASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDA  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGG
T ss_pred             chhhhccHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchh
Confidence            99999999999999999999 99999999999999987765544433333333444688999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      +|+|||.|.+|
T Consensus       231 ~~itG~~i~vD  241 (247)
T d2ew8a1         231 SFITGQTLAVD  241 (247)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCcCCeEEEC
Confidence            99999999998

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.3e-59  Score=381.96  Aligned_cols=240  Identities=28%  Similarity=0.373  Sum_probs=224.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+.||++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            48999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHH--HHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      |+||||||+...+++.+.+.++|++.+++|+.++++++|+++|+  |.+++.        |+||+++|..+..+.+....
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~--------g~Ii~i~S~~~~~~~~~~~~  152 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGT--------GRIVNIASTGGKQGVVHAAP  152 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTE--------EEEEEECCGGGTSCCTTCHH
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCC--------cccccccccccccccccchh
Confidence            99999999988899999999999999999999999999999997  555554        89999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC---------CCChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      |++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++...         ...+++..+.+.+..|++|+++|||||++
T Consensus       153 Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~  231 (257)
T d2rhca1         153 YSASKHGVVGFTKALGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM  231 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            99999999999999999999 999999999999999876422         23456777788889999999999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+|+.++|+|||.|.+|
T Consensus       232 v~fL~S~~s~~itG~~i~vD  251 (257)
T d2rhca1         232 VAYLIGPGAAAVTAQALNVC  251 (257)
T ss_dssp             HHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHhCchhcCCcCceEEEC
Confidence            99999999999999999998

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.1e-59  Score=381.97  Aligned_cols=243  Identities=26%  Similarity=0.334  Sum_probs=195.7

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++|+||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++...+.++.++.||++++++++++++++.+.
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             c-CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           87 F-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        87 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      + |++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+.
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------G~Iv~isS~~~~~~~~~  154 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGC--------GNIIFMSSIAGVVSASV  154 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--------CEEEEEC----------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccc--------ccccccccccccccccc
Confidence            8 68999999999988899999999999999999999999999999999998875        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|+++|+|+.+|+|+|+.|++ ++|||||+|+||+++|++.. ...+++..+...+..|++|+++|||||++++||+|
T Consensus       155 ~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~V~PG~i~T~~~~-~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S  232 (259)
T d1xq1a_         155 GSIYSATKGALNQLARNLACEWA-SDGIRANAVAPAVIATPLAE-AVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM  232 (259)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTS
T ss_pred             cccccccccchhhhhHHHHHHhc-ccCeEEEEeccCcccCHHhh-hhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999 99999999999999976543 44455666777888999999999999999999999


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      +.++|+|||.|.+|
T Consensus       233 ~~s~~iTG~~i~vD  246 (259)
T d1xq1a_         233 PAASYITGQTICVD  246 (259)
T ss_dssp             GGGTTCCSCEEECC
T ss_pred             chhcCCcCcEEEeC
Confidence            99999999999998

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=7.1e-59  Score=378.53  Aligned_cols=241  Identities=29%  Similarity=0.346  Sum_probs=221.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      |.|+||+++||||++|||+++|+.|+++|++|++++|+.+.++++.+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            3589999999999999999999999999999999999998888888776   5678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|.|.++..       +|+||++||..+..+.+...
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~  150 (256)
T d1k2wa_          78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGR-------GGKIINMASQAGRRGEALVG  150 (256)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTCH
T ss_pred             CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhcc-------CCccccccchhhcccccccc
Confidence            99999999999988899999999999999999999999999999998766542       49999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC---------CCChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      .|++||+|+++|+|+++.|++ ++|||||+|+||+++|++...         ....++..+.+....|++|+++|+|||+
T Consensus       151 ~Y~asKaal~~lt~~lA~el~-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~  229 (256)
T d1k2wa_         151 VYCATKAAVISLTQSAGLNLI-RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTG  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred             chhhhhhHHHHHHHHHHHHhc-ccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            999999999999999999999 999999999999999876422         2234456667788899999999999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+|+.++|+|||.|.+|
T Consensus       230 ~v~fL~S~~a~~iTG~~i~vD  250 (256)
T d1k2wa_         230 MAIFLATPEADYIVAQTYNVD  250 (256)
T ss_dssp             HHHHTTSGGGTTCCSCEEEES
T ss_pred             HHHHHhCchhCCccCceEEEC
Confidence            999999999999999999998

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=6.2e-59  Score=380.00  Aligned_cols=242  Identities=29%  Similarity=0.370  Sum_probs=215.8

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      +|+||+++||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+ .+.++.++.+|++|+++++++++++.+.
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999997 4567777777754 4678999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      ||++|+||||||....+++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+..
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------G~Iv~isS~~~~~~~~~~  152 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGF--------GRIINIASAHGLVASANK  152 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTC
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCC--------ceEeecccccceeccCCc
Confidence            999999999999988899999999999999999999999999999999999875        999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC----------hHHHHHHhhhhccCCCCCCHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----------PEEIRSKATDYMAAYKFGEKWDI  236 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dv  236 (259)
                      ..|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++......          ++...+.+.+..|++|+++|+||
T Consensus       153 ~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedi  231 (260)
T d1x1ta1         153 SAYVAAKHGVVGFTKVTALETA-GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL  231 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHH
T ss_pred             chhhhhhhhHHHhHHHHHHHhc-hhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHH
Confidence            9999999999999999999999 999999999999999876543321          12233446778899999999999


Q ss_pred             HHHHHHhcCccCCcccccccccC
Q 024976          237 AMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       237 a~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |++++||+|+.++|+|||.|.+|
T Consensus       232 A~~v~fL~S~~a~~itG~~i~vD  254 (260)
T d1x1ta1         232 GGTAVFLASDAAAQITGTTVSVD  254 (260)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHhChhhCCCcCCEEEEC
Confidence            99999999999999999999998

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=7.5e-59  Score=378.48  Aligned_cols=242  Identities=27%  Similarity=0.391  Sum_probs=222.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .|+||+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++..+.||++|+++++++++++.+.
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999999999988888644  457889999999999999999999999


Q ss_pred             cCCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      ||++|+||||||+.. .+++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+.
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------G~Ii~isS~~~~~~~~~  152 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGS--------GMVVNTASVGGIRGIGN  152 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSBCSS
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcC--------CCCcccccHhhccCCCC
Confidence            999999999999764 567889999999999999999999999999999998775        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC------CChHHHHHHhhhhccCCCCCCHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------LAPEEIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      ...|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++....      ..+++..+.+.+..|++|+++|+|||++
T Consensus       153 ~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~  231 (258)
T d1iy8a_         153 QSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAV  231 (258)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhC-ccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            99999999999999999999999 9999999999999998764322      1235566677888999999999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+|+.++|+|||.|.+|
T Consensus       232 v~fL~S~~s~~itG~~i~VD  251 (258)
T d1iy8a_         232 VAFLLSDDASYVNATVVPID  251 (258)
T ss_dssp             HHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHhCchhcCCcCceEEcC
Confidence            99999999999999999998

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.8e-58  Score=375.00  Aligned_cols=241  Identities=27%  Similarity=0.359  Sum_probs=221.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+.+.++++.+++.. +.++.++.+|++|+++++++++++.+.||
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            38999999999999999999999999999999999999999998888854 45799999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||....+++.+.+.++|++.+++|+.++++++|+++|+|++++.       +|+||++||..+..+.+....
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~-------gg~Ii~isS~~~~~~~~~~~~  154 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGA  154 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS-------CEEEEEECCGGGTSCCTTCHH
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCC-------CCceEeeeccceeccCCCchh
Confidence            9999999999998899999999999999999999999999999999998765       468999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          169 VSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e--~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      |++||+|+.+|+|+++.|  ++ ++|||||+|+||+++|++.. ....++.........|++|+++|||||++++||+|+
T Consensus       155 Y~asKaal~~lt~~lA~e~~l~-~~gIrVN~I~PG~i~T~~~~-~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~  232 (251)
T d1zk4a1         155 YNASKGAVRIMSKSAALDCALK-DYDVRVNTVHPGYIKTPLVD-DLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASN  232 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEECCBCCHHHH-TSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHhcchHHHHHHHhcC-CCcEEEEEEeCCCCCChhHH-hcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999998  55 88999999999999976544 444445555566778999999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .++|+|||.|.+|
T Consensus       233 ~s~~itG~~i~vD  245 (251)
T d1zk4a1         233 ESKFATGSEFVVD  245 (251)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             hhCCCcCcEEEEC
Confidence            9999999999998

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.2e-58  Score=375.59  Aligned_cols=240  Identities=28%  Similarity=0.337  Sum_probs=221.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .|++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.++.++.||++|+++++++++++.+.||++|
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            37889999999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +||||||+...+++.+.++++|++.+++|+.++++++|+++|+|.+++.       +|+|+++||..+..+.+....|++
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~a  153 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAVYSS  153 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcc-------ccccccccchhhcccCcccccchh
Confidence            9999999988899999999999999999999999999999999877653       488999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---------CChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ||+|+.+|+|+|+.|++ ++|||||+|+||+++|++....         ...++....+.+..|++|+++|||||++++|
T Consensus       154 sKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~f  232 (255)
T d1gega_         154 SKFAVRGLTQTAARDLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSY  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             CHHHHHhhHHHHHHHhh-hhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999 9999999999999998653221         1123345566778999999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.++|+|||.|.+|
T Consensus       233 L~S~~a~~itG~~i~vD  249 (255)
T d1gega_         233 LASPDSDYMTGQSLLID  249 (255)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCchhCCccCcEEEec
Confidence            99999999999999998

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.8e-58  Score=369.70  Aligned_cols=232  Identities=28%  Similarity=0.335  Sum_probs=215.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|+||+++||||++|||+++|+.|+++|++|++++|++++++++.+++.   .++.++++|++|+++++++++++.+.+|
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999999999999999998888887774   4688999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||....+++.+.++++|++.+++|+.++++++|.+.|.|++++.        |+||++||..+..+.+....
T Consensus        80 ~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~Ii~isS~~~~~~~~~~~~  151 (244)
T d1nffa_          80 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGR--------GSIINISSIEGLAGTVACHG  151 (244)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTBHH
T ss_pred             CCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCc--------ceEEeccccccccccccccc
Confidence            9999999999988899999999999999999999999999999999998875        99999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+++|+|+++|+|+++.|++ ++|||||+|+||+++|++. .....      .....|++|+++|||||++++||+|+.+
T Consensus       152 Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~-~~~~~------~~~~~pl~R~~~p~diA~~v~fL~s~~s  223 (244)
T d1nffa_         152 YTATKFAVRGLTKSTALELG-PSGIRVNSIHPGLVKTPMT-DWVPE------DIFQTALGRAAEPVEVSNLVVYLASDES  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSGGG-TTSCT------TCSCCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred             hhhHHHHHHHHHHHHHHHhc-ccCEEEEEEeeCCccChhH-hhhhH------HHHhccccCCCCHHHHHHHHHHHhChhh
Confidence            99999999999999999999 9999999999999997654 22221      1345789999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      +|+|||.|.+|
T Consensus       224 ~~itG~~i~vD  234 (244)
T d1nffa_         224 SYSTGAEFVVD  234 (244)
T ss_dssp             TTCCSCEEEES
T ss_pred             CCCcCCEEEEC
Confidence            99999999998

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.8e-58  Score=372.85  Aligned_cols=236  Identities=30%  Similarity=0.393  Sum_probs=213.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.. +..+++     ...++++|++|+++++++++++.+.||
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            58999999999999999999999999999999999997754 334443     256789999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      +||+||||||...++++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||+++|..+..+.+....
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--------G~Ii~isS~~~~~~~~~~~~  147 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGG--------GAIVNVASVQGLFAEQENAA  147 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC--------EEEEEECCGGGTSBCTTBHH
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccc--------ccccccccccccccccccch
Confidence            9999999999988899999999999999999999999999999999998875        99999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC----ChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      |+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++.....    .+++..+.+.+..|++|+++|||||++++||+
T Consensus       148 Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~  226 (248)
T d2d1ya1         148 YNASKGGLVNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA  226 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999 99999999999999987653322    23455667778899999999999999999999


Q ss_pred             CccCCcccccccccC
Q 024976          245 SDAAVHRDLIHLLDD  259 (259)
Q Consensus       245 s~~~~~~tG~~i~~D  259 (259)
                      |+.++|+|||.|.+|
T Consensus       227 S~~s~~itG~~i~vD  241 (248)
T d2d1ya1         227 SEKASFITGAILPVD  241 (248)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CchhcCCCCcEEEcC
Confidence            999999999999998

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.4e-58  Score=369.59  Aligned_cols=235  Identities=29%  Similarity=0.355  Sum_probs=215.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      |.|+||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++     +.+++.||++|+++++++++++.+.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            4589999999999999999999999999999999999998888776655     36789999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|+|.+++.        +.|+++|| .+..+.++..
T Consensus        76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------~~i~~~ss-~~~~~~~~~~  146 (242)
T d1ulsa_          76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNP--------GSIVLTAS-RVYLGNLGQA  146 (242)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--------EEEEEECC-GGGGCCTTCH
T ss_pred             CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccccc--------ceeeeecc-ccccCCCCCc
Confidence            99999999999988899999999999999999999999999999999988764        77777776 4677888899


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++... . +++..+...+..|++|+++|||||++++||+|+.
T Consensus       147 ~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~v~T~~~~~-~-~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~  223 (242)
T d1ulsa_         147 NYAASMAGVVGLTRTLALELG-RWGIRVNTLAPGFIETRMTAK-V-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTSS-S-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             chHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeeCcccChhhhc-C-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchh
Confidence            999999999999999999999 999999999999999876543 2 4566677888899999999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ++|+|||.|.+|
T Consensus       224 s~~itG~~i~vD  235 (242)
T d1ulsa_         224 SSFITGQVLFVD  235 (242)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hCCCCCcEEEEC
Confidence            999999999998

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.6e-58  Score=370.83  Aligned_cols=236  Identities=28%  Similarity=0.355  Sum_probs=219.6

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++|||||++|||+++|++|+++|++|++. .|+.+.++++.++++..+.++.++.+|++|+++++++++++.+.+|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999999999987 4567778888899988888899999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  171 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  171 (259)
                      +||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+....|++
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~IVnisS~~~~~~~~~~~~Y~a  153 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK--------GRIINIASVVGLIGNIGQANYAA  153 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTCHHHHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCC--------cEEEEEcChhhcCCCCCCHHHHH
Confidence            9999999988899999999999999999999999999999999998875        99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc-CccCCc
Q 024976          172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAAVH  250 (259)
Q Consensus       172 sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~  250 (259)
                      ||+|+.+|+|+|+.|++ ++|||||+|+||+++|++.. .+ +++..+.+.+..|++|+++|||||++++||+ |+.++|
T Consensus       154 sKaal~~ltk~lA~el~-~~gIrvN~I~PG~i~T~~~~-~~-~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~  230 (244)
T d1edoa_         154 AKAGVIGFSKTAAREGA-SRNINVNVVCPGFIASDMTA-KL-GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASY  230 (244)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHH-TT-CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGG
T ss_pred             HHHHHHHChHHHHHHHh-hhCcEEEEEecceeccHHHH-Hh-hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcC
Confidence            99999999999999999 99999999999999976543 33 3556677788899999999999999999996 999999


Q ss_pred             ccccccccC
Q 024976          251 RDLIHLLDD  259 (259)
Q Consensus       251 ~tG~~i~~D  259 (259)
                      +|||.|.+|
T Consensus       231 itG~~i~vd  239 (244)
T d1edoa_         231 ITGQAFTID  239 (244)
T ss_dssp             CCSCEEEES
T ss_pred             CcCCeEEeC
Confidence            999999998

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.7e-58  Score=369.69  Aligned_cols=231  Identities=25%  Similarity=0.312  Sum_probs=205.4

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+.+.+           .++..+++|++|+++++++++++.+.
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence            4579999999999999999999999999999999999987643           34778999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|+||||||....+++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+..
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------g~Iv~isS~~~~~~~~~~  142 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKF--------GRMIFIGSVSGLWGIGNQ  142 (237)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCCCC-----CC
T ss_pred             cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCC--------CceEEEcchhhccCCccc
Confidence            999999999999988899999999999999999999999999999999999875        999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|++||+|+++|+|+|+.|++ ++|||||+|+||+++|++... . +++..+...+..|++|+++|||||++++||+|+
T Consensus       143 ~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~v~T~~~~~-~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~  219 (237)
T d1uzma1         143 ANYAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTRA-L-DERIQQGALQFIPAKRVGTPAEVAGVVSFLASE  219 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHH-S-CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhh-cCCceeeeeeeCcCCChhhhc-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999 999999999999999765432 2 455666778889999999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      +++|+|||.|.+|
T Consensus       220 ~s~~itG~~i~vd  232 (237)
T d1uzma1         220 DASYISGAVIPVD  232 (237)
T ss_dssp             GGTTCCSCEEEES
T ss_pred             hhcCCcCCeEEEC
Confidence            9999999999998

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=4.8e-57  Score=367.74  Aligned_cols=243  Identities=26%  Similarity=0.338  Sum_probs=224.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++|+||++|||||++|||++++++|+++|++|++++|++++++++.+++...+.+++++.+|++++++++++++++.+.+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999999999999999999999999888889999999999999999999999998


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 -GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                       |++|+||||||.....++.+.+.++|.+.+++|+.++++++|+++|.|.+++.        |+||++||..+..+.+..
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~--------g~ii~isS~~~~~~~~~~  153 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQN--------GNVIFLSSIAGFSALPSV  153 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--------EEEEEECCGGGTSCCTTC
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccc--------cccccccccccccccccc
Confidence             68999999999998899999999999999999999999999999999998875        999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC----hHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ..|+++|+|+++|+|.+++|++ ++|||||+|+||+++|++....+.    +++..+.+....|++|+++|+|||++++|
T Consensus       154 ~~Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~f  232 (258)
T d1ae1a_         154 SLYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAF  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcC-cCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999 999999999999999876544332    35666777888999999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.++|+|||.|++|
T Consensus       233 L~S~~s~~itG~~i~vD  249 (258)
T d1ae1a_         233 LCFPAASYITGQIIWAD  249 (258)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhChhhCCCcCcEEEeC
Confidence            99999999999999998

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=2.2e-58  Score=374.23  Aligned_cols=237  Identities=29%  Similarity=0.281  Sum_probs=217.1

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +|+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++++|++++++++++++++.+.||
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999999999999998887776665   45789999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+....
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~--------G~II~isS~~~~~~~~~~~~  150 (254)
T d1hdca_          79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGG--------GSIVNISSAAGLMGLALTSS  150 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTCHH
T ss_pred             CccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCC--------Ceecccccchhcccccchhh
Confidence            9999999999988899999999999999999999999999999999998875        99999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCC-CHHHHHHHHHHhcCcc
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG-EKWDIAMAALYLASDA  247 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~~  247 (259)
                      |++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++......  +..+...+..|++|++ +|||||++++||+|+.
T Consensus       151 Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~  227 (254)
T d1hdca_         151 YGASKWGVRGLSKLAAVELG-TDRIRVNSVHPGMTYTPMTAETGI--RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHTC--CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhC-CCceEEEEeeeCcccCccchhcCH--HHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchh
Confidence            99999999999999999999 999999999999999875433221  1223445678999997 6999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ++|+|||.|.+|
T Consensus       228 a~~itG~~i~vD  239 (254)
T d1hdca_         228 SSYVTGAELAVD  239 (254)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hCCCCCceEEeC
Confidence            999999999998

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-57  Score=367.33  Aligned_cols=236  Identities=25%  Similarity=0.300  Sum_probs=216.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++|+||++|||||++|||+++++.|+++|++|++++|+.++++++.+++.    .+..+.+|++|+++++++++    ++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~----~~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALG----GI   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hc
Confidence            46899999999999999999999999999999999999988887776653    47889999999999877664    57


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||....+++.+.++++|++.+++|+.++++++|++.|.|.+++.       +|+||+++|..+..+.+...
T Consensus        73 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~  145 (242)
T d1cyda_          73 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVTFPNLI  145 (242)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred             CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcc-------cCcccccchhhccccCCccc
Confidence            99999999999988899999999999999999999999999999998765532       48999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+|+.+|+|+|+.|++ ++|||||+|+||+++|++.......++..+.+.+..|++|+++|||||++++||+|+.
T Consensus       146 ~Y~asKaal~~lt~~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~  224 (242)
T d1cyda_         146 TYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR  224 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             cccchHHHHHHHHHHHHHHhC-ccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999 9999999999999998776655566777888888999999999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ++|+|||.|.+|
T Consensus       225 s~~itG~~i~vD  236 (242)
T d1cyda_         225 SASTSGGGILVD  236 (242)
T ss_dssp             GTTCCSSEEEES
T ss_pred             hcCcCCceEEeC
Confidence            999999999998

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-57  Score=366.75  Aligned_cols=237  Identities=32%  Similarity=0.430  Sum_probs=214.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..|+||+++||||++|||+++|+.|+++|++|++++|+++.++++.+++    .++.++.||++|+++++++++++.+.|
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            3589999999999999999999999999999999999998888777665    358899999999999999999999999


Q ss_pred             CCccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      |++|+||||||... ..++.+.+.++|++.+++|+.++++++|+++|+|++++         |+||++||..+..+.+..
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~---------G~Ii~isS~~~~~~~~~~  148 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ---------GNVINISSLVGAIGQAQA  148 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCHHHHHCCTTC
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC---------CCCcccccccccccccCc
Confidence            99999999999764 46678899999999999999999999999999998753         899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC---CC-ChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---KL-APEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ..|+++|+|+.+|+|+|+.|++ ++|||||+|+||+++|++...   .. .+++..+......|++|+++|||||++++|
T Consensus       149 ~~Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~f  227 (250)
T d1ydea1         149 VPYVATKGAVTAMTKALALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVF  227 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred             chhHHHHhhHHHHHHHHHHHhc-ccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999 999999999999999876432   11 234455566667899999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+ ++|+|||.|.+|
T Consensus       228 L~Sd-a~~itG~~i~vD  243 (250)
T d1ydea1         228 LASE-ANFCTGIELLVT  243 (250)
T ss_dssp             HHHH-CTTCCSCEEEES
T ss_pred             HhCc-cCCCcCCeEEEC
Confidence            9997 889999999998

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-57  Score=364.41  Aligned_cols=236  Identities=25%  Similarity=0.302  Sum_probs=216.5

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.    .+..+.+|++|+++++++++    .+
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~~   74 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hh
Confidence            45899999999999999999999999999999999999988888777653    47889999999999887764    57


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||....+++.+.+.++|++.+++|+.++++++|+++|.|.++..       +|+||++||..+..+.+...
T Consensus        75 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~-------~g~Ii~isS~~~~~~~~~~~  147 (244)
T d1pr9a_          75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRAVTNHS  147 (244)
T ss_dssp             CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred             CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC-------cceEeecccccccccccchh
Confidence            99999999999988899999999999999999999999999999997655422       49999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|++||+|+++|+|+++.|++ ++|||||+|+||+++|++........+..+.+.+..|++|+++|||||++++||+|+.
T Consensus       148 ~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~  226 (244)
T d1pr9a_         148 VYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             hhhhhHHHHHHHHHHHHHHhC-CCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999 9999999999999998877666666777778888999999999999999999999999


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ++|+|||.|.+|
T Consensus       227 a~~itG~~i~vD  238 (244)
T d1pr9a_         227 SGMTTGSTLPVE  238 (244)
T ss_dssp             GTTCCSCEEEES
T ss_pred             hCCcCCcEEEEC
Confidence            999999999998

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3e-57  Score=367.94  Aligned_cols=238  Identities=31%  Similarity=0.364  Sum_probs=216.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|+||+++||||++|||+++++.|+++|++|++++|+++.++++.+++   +.+..++++|++|+++++++++++.+.+|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   79 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999999999999888888777   45688999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|+||||||....+++.+.+.++|++.+++|+.++++++|+++|+|+++         +|+||++||..+..+.+....
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~---------~G~Iv~isS~~~~~~~~~~~~  150 (253)
T d1hxha_          80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYAG  150 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT---------CEEEEEECCGGGTSCCTTBHH
T ss_pred             CCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc---------CCceecccchhhhcCcccccc
Confidence            99999999999888899999999999999999999999999999999754         399999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEecccccCCcccCCCC---hHHHHHHhhhhccCCCCCCHHHHHHHHHHh
Q 024976          169 VSAAKAAVDSITRSLALEWGTD--YAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAYKFGEKWDIAMAALYL  243 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~--~gi~v~~i~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (259)
                      |++||+|+.+|+|+++.|++ +  +|||||+|+||+++|++......   .++.........|.+|+++|||||++++||
T Consensus       151 Y~asKaal~~lt~~lA~e~~-~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL  229 (253)
T d1hxha_         151 YSASKAAVSALTRAAALSCR-KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHh-hcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHH
Confidence            99999999999999999998 5  56999999999999876544333   233444445566788999999999999999


Q ss_pred             cCccCCcccccccccC
Q 024976          244 ASDAAVHRDLIHLLDD  259 (259)
Q Consensus       244 ~s~~~~~~tG~~i~~D  259 (259)
                      +|++++|+|||.|.+|
T Consensus       230 ~S~~s~~itG~~i~VD  245 (253)
T d1hxha_         230 ASDESSVMSGSELHAD  245 (253)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             hChhhCCCcCcEEEEC
Confidence            9999999999999998

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.3e-56  Score=366.21  Aligned_cols=244  Identities=21%  Similarity=0.347  Sum_probs=220.2

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..++|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++. ..+.++.+++||++|+++++++++++.
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            3467999999999999999999999999999999999999999888888775 457789999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---  161 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  161 (259)
                      +.+|++|+||||||+...+++.+.+.++|++.+++|+.++++++|++.|+|.++..       +|+|++++|.....   
T Consensus        83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~-------~g~i~~~~s~~~~~~~~  155 (260)
T d1h5qa_          83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQ  155 (260)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCE
T ss_pred             HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccccc-------ceEEEEeeccccccccc
Confidence            99999999999999988899999999999999999999999999999999875543       47888888766543   


Q ss_pred             ----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          162 ----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       162 ----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                          +.+....|+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++... . +++..+...+..|++|+++|||||
T Consensus       156 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~i~T~~~~~-~-~~~~~~~~~~~~pl~R~g~pedvA  232 (260)
T d1h5qa_         156 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYVNTDQTAH-M-DKKIRDHQASNIPLNRFAQPEEMT  232 (260)
T ss_dssp             EETTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGGG-S-CHHHHHHHHHTCTTSSCBCGGGGH
T ss_pred             cccccCccccchhhhhhhHHHHHHHHHHHhc-hhCeEEeecCCCcccCcchhc-c-CHHHHHHHHhcCCCCCCcCHHHHH
Confidence                335678999999999999999999999 999999999999999765433 3 456667788889999999999999


Q ss_pred             HHHHHhcCccCCcccccccccC
Q 024976          238 MAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       238 ~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++++||+|+.++|+|||.|.+|
T Consensus       233 ~~v~fL~S~~s~~itG~~i~VD  254 (260)
T d1h5qa_         233 GQAILLLSDHATYMTGGEYFID  254 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEC
T ss_pred             HHHHHHhcchhCCCcCceEEEC
Confidence            9999999999999999999998

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=6.5e-56  Score=363.56  Aligned_cols=241  Identities=25%  Similarity=0.288  Sum_probs=214.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+ .+.++.||++|+++++++++++.+.||
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999999999999999986543 588899999999999999999999999


Q ss_pred             CccEEEECCCCCCCC--CCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-
Q 024976           89 KLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-  165 (259)
Q Consensus        89 ~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  165 (259)
                      ++|++|||||.....  .+.+.+.++|++.+++|+.++++++|+++|+|.+++.        |+||+++|..+..+.++ 
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------g~ii~iss~~~~~~~~~~  153 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKK--------GSIVFTASISSFTAGEGV  153 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTC--------EEEEEECCGGGTCCCTTS
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCC--------CCcccccccccccccccc
Confidence            999999999986544  4778999999999999999999999999999998875        99999999999887655 


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh-HHHHHH--hhhhccCCCCCCHHHHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSK--ATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ...|++||+|+.+|+|+++.||+ ++|||||+|+||+++|++....... ++..+.  .....|.+|+++|||||++++|
T Consensus       154 ~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~f  232 (268)
T d2bgka1         154 SHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAY  232 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHH
T ss_pred             ccccchhHHHHHhCHHHHHHHhC-hhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHH
Confidence            45899999999999999999999 9999999999999998876554432 222222  2234578899999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.++|||||.|.+|
T Consensus       233 L~S~~s~~itGq~i~VD  249 (268)
T d2bgka1         233 LAGDESKYVSGLNLVID  249 (268)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhChhhCCccCceEEEC
Confidence            99999999999999998

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-56  Score=367.39  Aligned_cols=244  Identities=32%  Similarity=0.487  Sum_probs=222.2

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-----CCCeEEEEcCCCCHHHHHHHH
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-----GIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      +...|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...     +.++.++.||++|++++++++
T Consensus         6 ~~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   85 (297)
T d1yxma1           6 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   85 (297)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence            346799999999999999999999999999999999999999999999888642     567999999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +++.+.+|++|+||||||.....++.+.+.++|++.+++|+.++++++|+++|.|.+++.        |+||++|| .+.
T Consensus        86 ~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------g~Ii~~ss-~~~  156 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHG--------GSIVNIIV-PTK  156 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC--------EEEEEECC-CCT
T ss_pred             HHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccc--------cccccccc-ccc
Confidence            999999999999999999988899999999999999999999999999999999998765        88998866 456


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      .+.+....|+++|+|+.+|+|++|.|++ ++|||||+|+||+++|++......  +++..+...+..|++|+++|||||+
T Consensus       157 ~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~  235 (297)
T d1yxma1         157 AGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSS  235 (297)
T ss_dssp             TCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHH
T ss_pred             ccccccccchhHHHHHHHHHHHHHHHhc-ccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            6778899999999999999999999999 999999999999999877544433  3455566777889999999999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+|+.++|||||.|.+|
T Consensus       236 ~v~fL~Sd~s~~iTG~~i~VD  256 (297)
T d1yxma1         236 VVCFLLSPAASFITGQSVDVD  256 (297)
T ss_dssp             HHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHhCchhcCcCCcEEEeC
Confidence            999999999999999999998

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=6.2e-56  Score=364.29  Aligned_cols=242  Identities=23%  Similarity=0.323  Sum_probs=212.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +.|+||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.+   .++.++.||++|+++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999997653   368999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCC----CCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe-ccccc
Q 024976           85 NHFGKLDILVNAAAGNFLVPA----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLH  159 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i-sS~~~  159 (259)
                      +.||++|+||||||.....++    .+.+.++|++.+++|+.+++.++|+++|+|+++.         |++|++ ||.++
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~---------g~iI~~~Ss~a~  151 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK---------GEIVNVSSIVAG  151 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGS
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC---------Cccccccchhcc
Confidence            999999999999998766555    3567778999999999999999999999998764         445555 55677


Q ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHH-------HHHHhhhhccCCCCCC
Q 024976          160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE-------IRSKATDYMAAYKFGE  232 (259)
Q Consensus       160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  232 (259)
                      ..+.+....|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++......+++       ......+..|++|+++
T Consensus       152 ~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~  230 (272)
T d1xkqa_         152 PQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGK  230 (272)
T ss_dssp             SSCCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBC
T ss_pred             ccCCCCcchhhhHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcC
Confidence            88999999999999999999999999999 999999999999999876554443322       2234456789999999


Q ss_pred             HHHHHHHHHHhcCcc-CCcccccccccC
Q 024976          233 KWDIAMAALYLASDA-AVHRDLIHLLDD  259 (259)
Q Consensus       233 ~~dva~~~~~l~s~~-~~~~tG~~i~~D  259 (259)
                      |||||++++||+|+. +.|+|||.|.+|
T Consensus       231 pediA~~v~fL~S~~as~~iTG~~i~vD  258 (272)
T d1xkqa_         231 PEHIANIILFLADRNLSFYILGQSIVAD  258 (272)
T ss_dssp             HHHHHHHHHHHHCHHHHTTCCSCEEEES
T ss_pred             HHHHHHHHHHHhCcchhCCccCeEEEeC
Confidence            999999999999975 689999999998

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=9.5e-56  Score=361.83  Aligned_cols=241  Identities=27%  Similarity=0.336  Sum_probs=205.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .|+||+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+   .++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999997653   3589999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCC----CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc-ccc
Q 024976           86 HFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LHY  160 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~~  160 (259)
                      .+|++|+||||||....    .++.+.+.|+|++.+++|+.++++++|+++|+|+++.         |++|+++|. .+.
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~---------g~iI~~~S~~~~~  152 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK---------GEIVNISSIASGL  152 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCTTSSS
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc---------Ccceeeeeecccc
Confidence            99999999999997543    3456778999999999999999999999999998764         566666555 467


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh-------HHHHHHhhhhccCCCCCCH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-------EEIRSKATDYMAAYKFGEK  233 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~  233 (259)
                      .+.+....|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++......+       .+....+.+..|++|+++|
T Consensus       153 ~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p  231 (264)
T d1spxa_         153 HATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQP  231 (264)
T ss_dssp             SCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCH
T ss_pred             ccCCCchhhhhhhhhHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCH
Confidence            8899999999999999999999999999 9999999999999998765443322       2233456678899999999


Q ss_pred             HHHHHHHHHhcCc-cCCcccccccccC
Q 024976          234 WDIAMAALYLASD-AAVHRDLIHLLDD  259 (259)
Q Consensus       234 ~dva~~~~~l~s~-~~~~~tG~~i~~D  259 (259)
                      ||||++++||+|+ .++|+|||.|.+|
T Consensus       232 edvA~~v~fL~S~~~s~~itG~~i~vD  258 (264)
T d1spxa_         232 QDIAEVIAFLADRKTSSYIIGHQLVVD  258 (264)
T ss_dssp             HHHHHHHHHHHCHHHHTTCCSCEEEES
T ss_pred             HHHHHHHHHHhCCcccCCccCceEEeC
Confidence            9999999999995 5999999999998

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.4e-55  Score=362.41  Aligned_cols=242  Identities=23%  Similarity=0.285  Sum_probs=215.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.+   .++.++.+|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999999999999997654   3688999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCC--CCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           86 HFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .||++|++|||||.....  .+.+.+.++|++.+++|+.++++++|+++|+|++++.        |+|+++||..+..+.
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------g~ii~~ss~~~~~~~  152 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKG--------EIVNVSSIVAGPQAH  152 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEECCGGGSSSCC
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccccc--------ccccchhhhhccccC
Confidence            999999999999976443  4456788999999999999999999999999998764        889999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHH-------HHHHhhhhccCCCCCCHHHH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE-------IRSKATDYMAAYKFGEKWDI  236 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dv  236 (259)
                      +....|+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++.......+.       ......+..|++|+++||||
T Consensus       153 ~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pedi  231 (274)
T d1xhla_         153 SGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI  231 (274)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred             CCCceehhhhhHHHHHHHHHHHHHh-HhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHH
Confidence            9999999999999999999999999 999999999999999876544433221       22233456899999999999


Q ss_pred             HHHHHHhcCc-cCCcccccccccC
Q 024976          237 AMAALYLASD-AAVHRDLIHLLDD  259 (259)
Q Consensus       237 a~~~~~l~s~-~~~~~tG~~i~~D  259 (259)
                      |++++||+|+ .++|+|||.|.+|
T Consensus       232 A~~v~fL~S~d~s~~itG~~i~vD  255 (274)
T d1xhla_         232 ANIIVFLADRNLSSYIIGQSIVAD  255 (274)
T ss_dssp             HHHHHHHHCHHHHTTCCSCEEEES
T ss_pred             HHHHHHHcCCccccCccCcEEEeC
Confidence            9999999995 6999999999998

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.8e-55  Score=355.20  Aligned_cols=241  Identities=26%  Similarity=0.402  Sum_probs=218.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe-CChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+|+||++|||||++|||+++|+.|+++|++|++.+ |+.+.++++.+++++.+.++.++.||++|+++++++++++.+.
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            358999999999999999999999999999999864 5566678889999988889999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-cccCcc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~~~  165 (259)
                      +|++|++|||||.....++.+.+.++|++.+++|+.++++++|+++|+|+++          |++++++|..+ ..+.+.
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~----------g~~iii~s~~~~~~~~~~  151 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG----------GRIILTSSIAAVMTGIPN  151 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE----------EEEEEECCGGGTCCSCCS
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC----------CcccccccccccccCCCC
Confidence            9999999999999888999999999999999999999999999999999764          66777766555 447889


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCccc-----------CCCChHHHHHHhhhhccCCCCCCHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV-----------SKLAPEEIRSKATDYMAAYKFGEKW  234 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~  234 (259)
                      +..|+++|+|+.+|+|+|+.|++ ++|||||+|+||+++|++..           ....+++..+.+.+..|++|+++|+
T Consensus       152 ~~~Y~asK~al~~l~r~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~  230 (259)
T d1ja9a_         152 HALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA  230 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHh-hcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHH
Confidence            99999999999999999999999 99999999999999986531           2233566777888899999999999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |||++++||+|+.++|||||.|.+|
T Consensus       231 eVa~~v~fL~S~~a~~itG~~i~vD  255 (259)
T d1ja9a_         231 DIGRAVSALCQEESEWINGQVIKLT  255 (259)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhCchhcCCcCceEEeC
Confidence            9999999999999999999999998

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.3e-54  Score=356.95  Aligned_cols=238  Identities=24%  Similarity=0.308  Sum_probs=209.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      |.|+||+++||||++|||+++|++|+++|++|++++|+.++++++.+++   +.++..+.+|++++++++++++++.+.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            4589999999999999999999999999999999999998888777665   4578999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCC-----CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           88 GKLDILVNAAAGNFLVP-----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        88 g~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      |++|++|||||+.....     ..+.++++|++.+++|+.++++++|+++|+|++++         |+||+++|..+..+
T Consensus        78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~---------g~iI~i~S~~~~~~  148 (276)
T d1bdba_          78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR---------GNVIFTISNAGFYP  148 (276)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGTST
T ss_pred             CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC---------CCceeeeechhccC
Confidence            99999999999764432     23455567999999999999999999999998763         88999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC--------CChHHHHHHhhhhccCCCCCCHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--------LAPEEIRSKATDYMAAYKFGEKW  234 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  234 (259)
                      .+....|++||+|+.+|+|+|+.|++ ++ ||||+|+||+++|++....        ...++..+.+.+..|++|+++||
T Consensus       149 ~~~~~~Y~asKaal~~ltr~lA~ela-~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe  226 (276)
T d1bdba_         149 NGGGPLYTAAKHAIVGLVRELAFELA-PY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE  226 (276)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGG
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhh-cc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHH
Confidence            99999999999999999999999998 75 9999999999998754322        12344556778889999999999


Q ss_pred             HHHHHHHHhcCc-cCCcccccccccC
Q 024976          235 DIAMAALYLASD-AAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~-~~~~~tG~~i~~D  259 (259)
                      |+|++++||+|+ .++|+|||.|.+|
T Consensus       227 eva~~v~fL~S~~~a~~itG~~i~VD  252 (276)
T d1bdba_         227 EYTGAYVFFATRGDAAPATGALLNYD  252 (276)
T ss_dssp             GGSHHHHHHHCHHHHTTCSSCEEEES
T ss_pred             HHHHHHHHHcCCcccCCeeCcEEEEC
Confidence            999999999995 6999999999998

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=6.8e-55  Score=354.27  Aligned_cols=231  Identities=17%  Similarity=0.192  Sum_probs=210.2

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      |+|||||++|||+++|+.|+++|++|++++|+.+.++++.+....      +..+|++++++++++++++.+.||++|+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence            899999999999999999999999999999998887776554432      34689999999999999999999999999


Q ss_pred             EECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 024976           94 VNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA  172 (259)
Q Consensus        94 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  172 (259)
                      |||||+.. .+++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.+....|++|
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~--------G~IV~isS~~~~~~~~~~~~Y~as  147 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKS--------GHIIFITSATPFGPWKELSTYTSA  147 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCSTTTSCCTTCHHHHHH
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccccc--------ceeecccccccccccccccccccc
Confidence            99999764 578899999999999999999999999999999998875        999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC------hHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       173 K~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      |+|+.+|+|+|+.|++ ++|||||+|+||+++|++......      .++..+.+.+..|++|+++|||||++++||+|+
T Consensus       148 Kaal~~lt~~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~  226 (252)
T d1zmta1         148 RAGACTLANALSKELG-EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG  226 (252)
T ss_dssp             HHHHHHHHHHHHHHHG-GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTT
T ss_pred             cccHHHHHHHHHHHhc-ccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999 999999999999999876544332      345566778889999999999999999999999


Q ss_pred             cCCcccccccccC
Q 024976          247 AAVHRDLIHLLDD  259 (259)
Q Consensus       247 ~~~~~tG~~i~~D  259 (259)
                      .++|+|||.|.+|
T Consensus       227 ~s~~iTG~~i~vd  239 (252)
T d1zmta1         227 SCDYLTGQVFWLA  239 (252)
T ss_dssp             SCGGGTTCEEEES
T ss_pred             hhcCCcCCeEEEC
Confidence            9999999999998

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1e-54  Score=354.43  Aligned_cols=241  Identities=23%  Similarity=0.226  Sum_probs=210.0

Q ss_pred             CCCCCCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      ..+|+||+++||||+|  |||+++|++|+++|++|++.+|+++..+...+ +...+.+..++++|++|+++++++++++.
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK-LAEALGGALLFRADVTQDEELDALFAGVK   81 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH-hhhccCcccccccccCCHHHHHHHHHHHH
Confidence            3579999999999987  99999999999999999999998765555444 44444567889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 024976           85 NHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  160 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
                      +.+|++|+||||||...    ..++.+.+.++|+..+++|+.+++.++|++.|+|++.          |+||++||..+.
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~----------G~Iv~isS~~~~  151 (256)
T d1ulua_          82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG----------GGIVTLTYYASE  151 (256)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE----------EEEEEEECGGGT
T ss_pred             HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC----------CEEEEEeehHhc
Confidence            99999999999999754    2456788899999999999999999999999988653          889999999999


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+.+....|+++|+|+++|+|+++.|++ ++|||||+|+||+++|++.......++..+...+..|++|+++|||||+++
T Consensus       152 ~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  230 (256)
T d1ulua_         152 KVVPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLG  230 (256)
T ss_dssp             SBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999 999999999999999877666555677778888899999999999999999


Q ss_pred             HHhcCccCCcccccccccC
Q 024976          241 LYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~D  259 (259)
                      +||+|+.++|+|||.|.+|
T Consensus       231 ~fL~S~~s~~itG~~i~VD  249 (256)
T d1ulua_         231 LFLLSPLASGITGEVVYVD  249 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCchhCCccCCeEEEC
Confidence            9999999999999999998

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.8e-54  Score=349.30  Aligned_cols=234  Identities=26%  Similarity=0.354  Sum_probs=206.3

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+   +.+.++.++++|++++++++++++++.+.+|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALEAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999999999999999877665444   4467899999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ++|++|||||.....++.+.+.++|.+.+++|+.+++.++|+++|+|.++          +.|+++||. +..+.+++..
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~----------~~i~~~ss~-a~~~~~~~~~  147 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG----------GSLVLTGSV-AGLGAFGLAH  147 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT----------CEEEEECCC-TTCCHHHHHH
T ss_pred             CccEeccccccccccchhhhhccccccccccccccccccccccccccccc----------cceeecccc-ccccccCccc
Confidence            99999999999888999999999999999999999999999999988764          445555554 4555578899


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccC
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA  248 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  248 (259)
                      |+++|+|+++|+|+|+.|++ ++|||||+|+||.++|++. ..+ +++..+...+..|.+|+++|+|||++++||+|+.+
T Consensus       148 Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~PG~v~T~~~-~~~-~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s  224 (241)
T d2a4ka1         148 YAAGKLGVVGLARTLALELA-RKGVRVNVLLPGLIQTPMT-AGL-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEES  224 (241)
T ss_dssp             HHHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECSBCCGGG-TTS-CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             cchhhHHHHHHHHHHHHHHh-HhCCEEeeeccCcCCCHHH-Hhh-hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchh
Confidence            99999999999999999999 9999999999999997654 333 45666777788999999999999999999999999


Q ss_pred             CcccccccccC
Q 024976          249 VHRDLIHLLDD  259 (259)
Q Consensus       249 ~~~tG~~i~~D  259 (259)
                      +|+|||.|.+|
T Consensus       225 ~~itG~~i~vD  235 (241)
T d2a4ka1         225 AYITGQALYVD  235 (241)
T ss_dssp             TTCCSCEEEES
T ss_pred             CCCcCceEEeC
Confidence            99999999998

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1e-53  Score=343.68  Aligned_cols=225  Identities=22%  Similarity=0.284  Sum_probs=203.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.+++       .  ...++.||+++.      ++.+.+.+|+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~--~~~~~~~Dv~~~------~~~~~~~~g~   66 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S--GHRYVVCDLRKD------LDLLFEKVKE   66 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T--CSEEEECCTTTC------HHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------c--CCcEEEcchHHH------HHHHHHHhCC
Confidence            689999999999999999999999999999999999765433       1  245788999864      4456677899


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|+||||||....+++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||+++|..+..+.+....|
T Consensus        67 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--------G~ii~i~S~~~~~~~~~~~~Y  138 (234)
T d1o5ia_          67 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGW--------GRIVAITSFSVISPIENLYTS  138 (234)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTBHHH
T ss_pred             CcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccc--------ccccccccccccccccccccc
Confidence            999999999988889999999999999999999999999999999998875        999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                      +++|+|+.+|+|+++.|++ ++|||||+|+||+++|++..... +++..+.+.+..|++|+++|||||++++||+|+.++
T Consensus       139 ~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~  216 (234)
T d1o5ia_         139 NSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKELL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKAS  216 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHHHS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHHHHHHHHHhc-ccCeEEeecccCccchhhhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhc
Confidence            9999999999999999999 99999999999999987654444 455667778889999999999999999999999999


Q ss_pred             cccccccccC
Q 024976          250 HRDLIHLLDD  259 (259)
Q Consensus       250 ~~tG~~i~~D  259 (259)
                      |+|||.|.+|
T Consensus       217 ~itG~~i~vD  226 (234)
T d1o5ia_         217 YLTGQTIVVD  226 (234)
T ss_dssp             TCCSCEEEES
T ss_pred             CCcCcEEEEC
Confidence            9999999998

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.3e-53  Score=348.33  Aligned_cols=241  Identities=31%  Similarity=0.426  Sum_probs=214.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+|+||+++||||++|||++++++|+++|++|++++|+ .+.++++.+++.+.+.++.++.+|++|+++++++++++.+.
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            45999999999999999999999999999999999887 55677888888888889999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCcc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWY  165 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~  165 (259)
                      +|++|++|||+|.....++.+.+.++|++.+++|+.++++++|+++|+|.++          |++++++|..+. .+.+.
T Consensus        94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~----------g~~i~i~s~~~~~~~~~~  163 (272)
T d1g0oa_          94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG----------GRLILMGSITGQAKAVPK  163 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT----------CEEEEECCGGGTCSSCSS
T ss_pred             hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc----------cccccccccccccccccc
Confidence            9999999999999888899999999999999999999999999999999764          678888877654 45677


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC----------CCChHHHH-HHhhhhccCCCCCCHH
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----------KLAPEEIR-SKATDYMAAYKFGEKW  234 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~----------~~~~~~~~-~~~~~~~~~~~~~~~~  234 (259)
                      ...|+++|+|+++|+|+++.||+ ++|||||+|+||+++|++...          ...+++.. .......|++|+++|+
T Consensus       164 ~~~Y~asKaal~~ltk~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~pe  242 (272)
T d1g0oa_         164 HAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI  242 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhc-hhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHH
Confidence            78899999999999999999999 999999999999999865311          12223222 2456778999999999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |||++++||+|+.++|+|||.|.+|
T Consensus       243 evA~~v~fL~s~~s~~itG~~i~vD  267 (272)
T d1g0oa_         243 DIARVVCFLASNDGGWVTGKVIGID  267 (272)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhCchhcCccCceEeEC
Confidence            9999999999999999999999998

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-53  Score=344.75  Aligned_cols=241  Identities=22%  Similarity=0.222  Sum_probs=211.5

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC--CCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      |.+|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.++++..+  .++.+++||++++++++++++++.
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            344999999999999999999999999999999999999999999999998764  468899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--c
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--A  162 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~  162 (259)
                      +.+|++|+||||||....+++.+.++++|++.+++|+.+++++++.++|+|++++.      .+|+||++||..+..  |
T Consensus        85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~------~~g~Ii~isS~~~~~~~p  158 (257)
T d1xg5a_          85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV------DDGHIININSMSGHRVLP  158 (257)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC------CSCEEEEECCGGGTSCCS
T ss_pred             HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc------CCCceEEEechHhcCCCC
Confidence            99999999999999988899999999999999999999999999999999987642      148999999999875  4


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHh--cCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEW--GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~--~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      .+....|+++|+|+.+|+|+|+.|+  + ++|||||+|+||.++|++.... .+ ...+......|.+|+++|||||+++
T Consensus       159 ~~~~~~Y~~sKaal~~ltr~la~el~~~-~~~I~vn~i~PG~i~t~~~~~~-~~-~~~~~~~~~~~~~r~~~pedvA~~v  235 (257)
T d1xg5a_         159 LSVTHFYSATKYAVTALTEGLRQELREA-QTHIRATCISPGVVETQFAFKL-HD-KDPEKAAATYEQMKCLKPEDVAEAV  235 (257)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHHHHT-TCCCEEEEEEESCBCSSHHHHH-TT-TCHHHHHHHHC---CBCHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHhCHHHHHHHHHhC-CCCEEEEEEeCCCCCChhhhhc-Ch-hhHHHHHhcCCCCCCcCHHHHHHHH
Confidence            5567789999999999999999998  5 8899999999999987653322 22 2234556678999999999999999


Q ss_pred             HHhcCccCCccccccc
Q 024976          241 LYLASDAAVHRDLIHL  256 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i  256 (259)
                      +||+|++++|+|||.+
T Consensus       236 ~fL~s~~a~~itG~i~  251 (257)
T d1xg5a_         236 IYVLSTPAHIQIGDIQ  251 (257)
T ss_dssp             HHHHHSCTTEEEEEEE
T ss_pred             HHHhCChhcCeECCEE
Confidence            9999999999999953

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=9.1e-53  Score=338.90  Aligned_cols=224  Identities=18%  Similarity=0.240  Sum_probs=207.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCe-------EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAA-------IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~-------vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +++|||||++|||+++|++|+++|++       |++++|+.+.++++.+++.+.+.++.++.||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999998       89999999999999999998888899999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .||++|+||||||....+++.+.+.++|++.+++|+.++++++|+++|+|++++.        |+||++||..+..+.++
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------G~Ii~isS~~~~~~~~~  153 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHS--------GHIFFITSVAATKAFRH  153 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTT
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCC--------CceEEEechhhcCCCCC
Confidence            9999999999999998899999999999999999999999999999999998875        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      ...|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++..+ ..++          ...++.+|||||++++||+|
T Consensus       154 ~~~Y~asK~al~~lt~~la~el~-~~gIrvn~i~PG~v~T~~~~~-~~~~----------~~~~~~~PedvA~~v~~l~s  221 (240)
T d2bd0a1         154 SSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAVYTPMWGK-VDDE----------MQALMMMPEDIAAPVVQAYL  221 (240)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCSTTTCC-CCST----------TGGGSBCHHHHHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEeeeCcccCchhhh-cCHh----------hHhcCCCHHHHHHHHHHHHc
Confidence            99999999999999999999998 999999999999999875432 2211          12357799999999999999


Q ss_pred             ccCCccccccc
Q 024976          246 DAAVHRDLIHL  256 (259)
Q Consensus       246 ~~~~~~tG~~i  256 (259)
                      +++++++|+.+
T Consensus       222 ~~~~~~~~~~~  232 (240)
T d2bd0a1         222 QPSRTVVEEII  232 (240)
T ss_dssp             SCTTEEEEEEE
T ss_pred             CCccCccCCEE
Confidence            99999988754

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-53  Score=345.58  Aligned_cols=234  Identities=28%  Similarity=0.334  Sum_probs=206.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+.  +.++.++.||++|+++++++++++.+.+
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999999999999888654  4578999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      |++|+||||||...        .++|++.+++|+.+++.++++++|+|.++..+.     +|+||++||..+..+.+...
T Consensus        81 G~iDilVnnAg~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~-----~g~Iv~isS~~~~~~~~~~~  147 (254)
T d2gdza1          81 GRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGE-----GGIIINMSSLAGLMPVAQQP  147 (254)
T ss_dssp             SCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCC-----CEEEEEECCGGGTSCCTTCH
T ss_pred             CCcCeecccccccc--------cccchheeeeehhhHHHHHHHHHHHHHHhhcCC-----CcEEEeeccHhhccCCCCcc
Confidence            99999999999743        245889999999999999999999998764321     48999999999999999999


Q ss_pred             hhHHHHHHHHHHHHH--HHHHhcCCCCeEEEEEecccccCCcccCCCChH------HHHHHhhhhccCCCCCCHHHHHHH
Q 024976          168 HVSAAKAAVDSITRS--LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE------EIRSKATDYMAAYKFGEKWDIAMA  239 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~--la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~  239 (259)
                      .|++||+|+.+|+|+  |+.|++ ++|||||+|+||+++|++.......+      +..+.+.+..|++|+++|||||++
T Consensus       148 ~Y~asKaal~~ltrs~ala~e~~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  226 (254)
T d2gdza1         148 VYCASKHGIVGFTRSAALAANLM-NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            999999999999997  788999 99999999999999987644333221      233455677889999999999999


Q ss_pred             HHHhcCccCCcccccccccC
Q 024976          240 ALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       240 ~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++||+|++  ++|||.|.+|
T Consensus       227 v~fL~s~~--~itG~~i~Vd  244 (254)
T d2gdza1         227 LITLIEDD--ALNGAIMKIT  244 (254)
T ss_dssp             HHHHHHCT--TCSSCEEEEE
T ss_pred             HHHHHcCC--CCCCCEEEEC
Confidence            99999975  4999999987

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=6.4e-52  Score=344.52  Aligned_cols=247  Identities=32%  Similarity=0.492  Sum_probs=221.3

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ++.++|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++.++.+|++++++++++++.+
T Consensus        18 ~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~   97 (294)
T d1w6ua_          18 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL   97 (294)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh
Confidence            344689999999999999999999999999999999999999999998888764 4678999999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT  163 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
                      .+.++++|++|||||.....++.+.+.++|++.+.+|+.+.+.+.+.+.+.+.....       ++.+++++|..+..+.
T Consensus        98 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~i~~~ss~~~~~~~  170 (294)
T d1w6ua_          98 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGS  170 (294)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CEEEEEECCTHHHHCC
T ss_pred             hhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccc-------cccccccccchhhhcc
Confidence            999999999999999988888899999999999999999999999998887765543       4788999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC-hHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      +....|+++|+|+++|+|.+|.|++ ++|||||+|+||+++|++...... .++..+...+..|++|+++|||||++++|
T Consensus       171 ~~~~~YsasKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~f  249 (294)
T d1w6ua_         171 GFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAF  249 (294)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHh-HhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999 999999999999999877655443 34566778888999999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.++|||||.|.+|
T Consensus       250 L~sd~s~~itG~~i~vD  266 (294)
T d1w6ua_         250 LCSDYASWINGAVIKFD  266 (294)
T ss_dssp             HTSGGGTTCCSCEEEES
T ss_pred             HhCchhcCCCCcEEEEC
Confidence            99999999999999998

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-52  Score=336.43  Aligned_cols=234  Identities=24%  Similarity=0.278  Sum_probs=207.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..|+||++|||||++|||+++++.|+++|++|++++|++++++++.+     ...+....+|+.+.+.++..    .+.+
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~----~~~~   72 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQF----ANEV   72 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHH----HHHC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeecccccccccc----cccc
Confidence            45999999999999999999999999999999999999877655433     23578889999987766655    4456


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQ  166 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~  166 (259)
                      +++|+||||+|....+++.+.+.++|++.+++|+.+++.++|++.|+|.+++.        |+||+++|..+. .+.+..
T Consensus        73 ~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~--------g~Ii~isS~~~~~~~~~~~  144 (245)
T d2ag5a1          73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKS--------GNIINMSSVASSVKGVVNR  144 (245)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCSBTTTBCCTTB
T ss_pred             ccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCC--------ceeeeeechhhccCCccch
Confidence            89999999999988889999999999999999999999999999999998875        999999998775 577889


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC----CCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      ..|+++|+|+++|+|+||.|++ ++|||||+|+||+++|++...    ...+++..+.+.+..|++|+++|||||+++.|
T Consensus       145 ~~Y~~sKaal~~l~r~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~f  223 (245)
T d2ag5a1         145 CVYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVY  223 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999 999999999999999866432    23345566777888999999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+++.|+|||.|.+|
T Consensus       224 L~s~~s~~iTG~~i~VD  240 (245)
T d2ag5a1         224 LASDESAYVTGNPVIID  240 (245)
T ss_dssp             HHSGGGTTCCSCEEEEC
T ss_pred             HhChhhCCCcCceEEeC
Confidence            99999999999999998

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-51  Score=342.55  Aligned_cols=227  Identities=20%  Similarity=0.253  Sum_probs=200.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC---------hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR---------KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVR   78 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~---------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~   78 (259)
                      ++|+||++|||||++|||+++|++|+++|++|++.+++         .+.+++..+++...   .....+|+++.+++++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~   79 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR---GGKAVANYDSVEAGEK   79 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT---TCEEEEECCCGGGHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc---ccccccccchHHHHHH
Confidence            45899999999999999999999999999999998764         44566666666543   3467789999999999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      +++++.+.+|++|+||||||+...+++.+.++++|++.+++|+.++++++|+++|+|++++.        |+||++||..
T Consensus        80 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--------G~IV~isS~~  151 (302)
T d1gz6a_          80 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY--------GRIIMTASAS  151 (302)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------EEEEEECCHH
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCC--------cEEEEeCChh
Confidence            99999999999999999999998899999999999999999999999999999999998875        9999999999


Q ss_pred             ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHH
Q 024976          159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM  238 (259)
Q Consensus       159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (259)
                      +..+.++...|++||+|+.+|+|+|+.|++ ++|||||+|+||++.| +....+. ++.          .|..+|||||+
T Consensus       152 ~~~~~~~~~~Y~asKaal~~lt~~la~E~~-~~gIrVN~I~PG~~~t-~~~~~~~-~~~----------~~~~~PedvA~  218 (302)
T d1gz6a_         152 GIYGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNAGSR-MTETVMP-EDL----------VEALKPEYVAP  218 (302)
T ss_dssp             HHHCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEECCST-TTGGGSC-HHH----------HHHSCGGGTHH
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHHHHHHHHh-ccCCceeeeCCCCCCc-chhhcCc-Hhh----------HhcCCHHHHHH
Confidence            999999999999999999999999999999 9999999999999964 3333332 221          23458999999


Q ss_pred             HHHHhcCccCCcccccccccC
Q 024976          239 AALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       239 ~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +++||+|+.+ ++|||.|.+|
T Consensus       219 ~v~fL~S~~a-~itG~~i~vd  238 (302)
T d1gz6a_         219 LVLWLCHESC-EENGGLFEVG  238 (302)
T ss_dssp             HHHHHTSTTC-CCCSCEEEEE
T ss_pred             HHHHHcCCCc-CCCCcEEEeC
Confidence            9999999866 7999999987

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-49  Score=323.50  Aligned_cols=240  Identities=20%  Similarity=0.161  Sum_probs=210.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHH---cCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~---~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      ..|+||+++||||++|||+++|++|++   +|++|++++|+.++++++.+++...  +.++.++.||++++++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            358999999999999999999999996   7999999999999999999999754  45788999999999999999999


Q ss_pred             HHHH----cCCccEEEECCCCCC---CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 024976           83 TINH----FGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS  155 (259)
Q Consensus        83 ~~~~----~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is  155 (259)
                      +.+.    ++.+|++|||||...   .+++.+.++++|++.+++|+.++++++|+++|+|++++.      ..|+||++|
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~------~~g~Iv~is  155 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG------LSKTVVNIS  155 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT------CEEEEEEEC
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCC------Ccccccccc
Confidence            8763    457999999999753   356788999999999999999999999999999987642      138999999


Q ss_pred             cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC---CChHHHHHHhhhhccCCCCCC
Q 024976          156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGE  232 (259)
Q Consensus       156 S~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~  232 (259)
                      |..+..+.+++..|++||+|+.+|+|+|+.|   .+|||||+|+||+++|++....   ..+++..+.+....|.+|+++
T Consensus       156 S~~~~~~~~~~~~Y~asKaal~~lt~~la~e---~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  232 (259)
T d1oaaa_         156 SLCALQPYKGWGLYCAGKAARDMLYQVLAAE---EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVD  232 (259)
T ss_dssp             CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH---CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBC
T ss_pred             cccccCCCccchHHHHHHHHHHHHHHHHHhC---CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCC
Confidence            9999999999999999999999999999998   4589999999999998754321   234566677777888999999


Q ss_pred             HHHHHHHHHHhcCccCCcccccccc
Q 024976          233 KWDIAMAALYLASDAAVHRDLIHLL  257 (259)
Q Consensus       233 ~~dva~~~~~l~s~~~~~~tG~~i~  257 (259)
                      |+|+|+.++||+++ .+|+|||.|=
T Consensus       233 p~evA~~i~~ll~~-~s~~TG~~id  256 (259)
T d1oaaa_         233 CGTSAQKLLGLLQK-DTFQSGAHVD  256 (259)
T ss_dssp             HHHHHHHHHHHHHH-CCSCTTEEEE
T ss_pred             HHHHHHHHHHHhhh-ccCCCCCeEE
Confidence            99999999999986 5799999873

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-49  Score=317.62  Aligned_cols=220  Identities=16%  Similarity=0.186  Sum_probs=199.7

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..++.||+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.||++|+++++++++++.+.
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      +|++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.        |+||++||..+..+.+.+
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~--------G~Iv~isS~~~~~~~~~~  153 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNH--------GHIVTVASAAGHVSVPFL  153 (244)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCCC-CCCHHHH
T ss_pred             cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCC--------ceEEEeecchhcCCCCCc
Confidence            999999999999998888899999999999999999999999999999999875        999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc
Q 024976          167 IHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~--~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (259)
                      +.|++||+|+.+|+++|+.|++  ..+||+||+|+||+++|++... .           ..+..+..+||++|+.++..+
T Consensus       154 ~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~-~-----------~~~~~~~~~pe~va~~i~~~~  221 (244)
T d1yb1a_         154 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-P-----------STSLGPTLEPEEVVNRLMHGI  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-T-----------HHHHCCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC-c-----------CccccCCCCHHHHHHHHHHHH
Confidence            9999999999999999999986  1368999999999999765432 1           112346779999999988765


Q ss_pred             Cc
Q 024976          245 SD  246 (259)
Q Consensus       245 s~  246 (259)
                      ..
T Consensus       222 ~~  223 (244)
T d1yb1a_         222 LT  223 (244)
T ss_dssp             HT
T ss_pred             hc
Confidence            43

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-48  Score=315.65  Aligned_cols=241  Identities=22%  Similarity=0.284  Sum_probs=205.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.+.....+|+.+.+.+++.+..+...+
T Consensus         1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccc
Confidence            4699999999999999999999999999999999999999888887776   4568899999999999999999999999


Q ss_pred             CCccEEEECCCCCCC------CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           88 GKLDILVNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        88 g~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      +.+|.+++|++....      .++.+.+.++|++.+++|+.++++++|++.|+|..+...  ....+|+||++||..+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~--~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPD--QGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC--TTSCCEEEEEECCTHHHH
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhh--ccCCceEEEEecchhhcc
Confidence            999999999875432      355677889999999999999999999999999765221  112258999999999999


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccC-CCCCCHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAA  240 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~  240 (259)
                      +.+++..|++||+|+++|+|+|+.|++ ++|||||+|+||+++|++... . +++..+.+.+..|+ +|+++|||||+++
T Consensus       156 ~~~~~~~Y~asKaal~~lt~~la~e~~-~~gIrvN~I~PG~i~T~~~~~-~-~~~~~~~~~~~~pl~~R~g~peevA~~v  232 (248)
T d2o23a1         156 GQVGQAAYSASKGGIVGMTLPIARDLA-PIGIRVMTIAPGLFGTPLLTS-L-PEKVCNFLASQVPFPSRLGDPAEYAHLV  232 (248)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhc-ccCcceeeeccCceecchhhc-C-CHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            999999999999999999999999999 999999999999999765433 3 34455566677776 8999999999999


Q ss_pred             HHhcCccCCccccccccc
Q 024976          241 LYLASDAAVHRDLIHLLD  258 (259)
Q Consensus       241 ~~l~s~~~~~~tG~~i~~  258 (259)
                      +||+|  ++|+|||.|.|
T Consensus       233 ~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         233 QAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHH--CTTCCSCEEEE
T ss_pred             HHHHh--CCCCCceEeEC
Confidence            99996  68999999875

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=3e-48  Score=314.90  Aligned_cols=235  Identities=19%  Similarity=0.142  Sum_probs=195.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCC-CHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVR-KREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~-~~~~~~~~~~~~~~   85 (259)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+.++.+...+..... +.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999988877766554443333 457889999998 67889999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                      .+|+||+||||||..        ++++|++++++|+.++++++++++|.|.+++.+     .+|+||++||..+..+.+.
T Consensus        81 ~~g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~-----~~g~Ii~isS~~~~~~~~~  147 (254)
T d1sbya1          81 QLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGG-----PGGIIANICSVTGFNAIHQ  147 (254)
T ss_dssp             HHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCGGGTSCCTT
T ss_pred             HcCCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccC-----CCceEEEEechhhccCCCC
Confidence            999999999999953        457799999999999999999999999876421     1499999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  245 (259)
                      +..|++||+|+.+|+|+|+.|++ ++|||||+|+||+++|++.......++..+.........+..+||++|+.++++.+
T Consensus       148 ~~~Y~asKaal~~~t~~la~el~-~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~  226 (254)
T d1sbya1         148 VPVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE  226 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHhhcc-ccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhh
Confidence            99999999999999999999998 99999999999999987543332222333333333334456789999999888875


Q ss_pred             ccCCcccccccccC
Q 024976          246 DAAVHRDLIHLLDD  259 (259)
Q Consensus       246 ~~~~~~tG~~i~~D  259 (259)
                      .   +.||+.|.+|
T Consensus       227 ~---~~tG~vi~vd  237 (254)
T d1sbya1         227 A---NKNGAIWKLD  237 (254)
T ss_dssp             H---CCTTCEEEEE
T ss_pred             C---CCCCCEEEEC
Confidence            3   3599999887

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-47  Score=311.41  Aligned_cols=239  Identities=20%  Similarity=0.188  Sum_probs=212.2

Q ss_pred             CCCCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .|+||++|||||+|  |||+++|+.|+++|++|++++|+++..+.. +++.........+.+|+++..++...++++.+.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            58999999999999  899999999999999999999996654444 444444556788899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCC-----CCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           87 FGKLDILVNAAAGNFLVPA-----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      ++++|++|||++......+     .....+.|...+++|+.+.+.+.+++.+.+.+.          +.|+++||..+..
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~Ii~iss~~~~~  150 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG----------SALLTLSYLGAER  150 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEEECGGGTS
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC----------cEEEEecchhhcc
Confidence            9999999999997644333     245667799999999999999999999988653          6799999999999


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  241 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (259)
                      +.+....|++||+|+++|+|+++.|++ ++|||||+|+||+++|++......++...+...+..|++|+++|||||+++.
T Consensus       151 ~~~~~~~Y~~sKaal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~  229 (258)
T d1qsga_         151 AIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA  229 (258)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhC-ccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999 9999999999999998876666666777778888999999999999999999


Q ss_pred             HhcCccCCcccccccccC
Q 024976          242 YLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       242 ~l~s~~~~~~tG~~i~~D  259 (259)
                      ||+|+.++|+|||.|.+|
T Consensus       230 fL~s~~s~~itG~~i~vD  247 (258)
T d1qsga_         230 FLCSDLSAGISGEVVHVD  247 (258)
T ss_dssp             HHTSGGGTTCCSCEEEES
T ss_pred             HHhCchhcCccCceEEEC
Confidence            999999999999999998

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-47  Score=314.97  Aligned_cols=235  Identities=21%  Similarity=0.226  Sum_probs=193.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEE---eCChhhHH---HHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIM---GRRKTVLR---SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~---~r~~~~~~---~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .|++|||||++|||+++|+.|+++|++|+++   .|+.+..+   +..+++...+.++.++.||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5889999999999999999999999985544   55544433   34444445577899999999999999999988743


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY  165 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
                        |++|++|||+|....+++.+.+.++|++.+++|+.|+++++|+++|+|++++.        |+||++||..+..+.+.
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~--------G~Iv~isS~~g~~~~~~  151 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGS--------GRVLVTGSVGGLMGLPF  151 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEEEEGGGTSCCTT
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCC--------CceEEEechhhcCCCCC
Confidence              89999999999988899999999999999999999999999999999998875        99999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHH---------HHHH------hhhhccCCCC
Q 024976          166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE---------IRSK------ATDYMAAYKF  230 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~---------~~~~------~~~~~~~~~~  230 (259)
                      ...|++||+|+.+|+++|+.|++ ++|||||+|+||+++|++.......++         ..+.      .....+..+.
T Consensus       152 ~~~Y~asKaal~~l~~~la~El~-~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
T d1jtva_         152 NDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAA  230 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccC
Confidence            99999999999999999999998 999999999999999876544433211         1111      1223445678


Q ss_pred             CCHHHHHHHHHHhcCc---cCCcccccccc
Q 024976          231 GEKWDIAMAALYLASD---AAVHRDLIHLL  257 (259)
Q Consensus       231 ~~~~dva~~~~~l~s~---~~~~~tG~~i~  257 (259)
                      .+|||||++++++++.   ..+|++|+.++
T Consensus       231 ~~PeeVA~~v~~~~~~~~p~~ry~~g~~~~  260 (285)
T d1jtva_         231 QNPEEVAEVFLTALRAPKPTLRYFTTERFL  260 (285)
T ss_dssp             BCHHHHHHHHHHHHHCSSCCSEEESCSTTH
T ss_pred             CCHHHHHHHHHHHHhCCCCCeEEecHHHHH
Confidence            8999999999999854   46899998753

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=2.3e-46  Score=309.41  Aligned_cols=240  Identities=21%  Similarity=0.252  Sum_probs=195.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC-hhhHHHHHHHHHhc-CCCeEE-----------------EEcCCCCH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSL-GIPAIG-----------------LEGDVRKR   73 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~-~~~~~~~~~~~~~~-~~~v~~-----------------~~~Dl~~~   73 (259)
                      .++|||||++|||+++|++|+++|++|++++++ .+..+.+.+++... +.....                 +.+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            389999999999999999999999999988765 55577777777643 333333                 45669999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHH--------------HHHhccchhHHHHHHHHHHHHHhcC
Q 024976           74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR--------------TVIEIDSVGTFIMCHEALKYLKKGG  139 (259)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~~~~~~  139 (259)
                      ++++++++++.+.+|++|+||||||...+.++.+.+.++|+              ..+.+|+.+++++.|++.+.+....
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            99999999999999999999999999888888777666554              4789999999999999999865322


Q ss_pred             CCCCCCCCCceEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHH
Q 024976          140 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  219 (259)
Q Consensus       140 ~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~  219 (259)
                      ..  .....++|++++|.....+.+++..|+++|+|+.+|+|+++.||+ ++|||||+|+||++.+..   .. +++..+
T Consensus       163 ~~--~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~t~~~~---~~-~~~~~~  235 (284)
T d1e7wa_         163 AK--HRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD---DM-PPAVWE  235 (284)
T ss_dssp             GG--GSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGG---GS-CHHHHH
T ss_pred             HH--hcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhC-Cccccccccccccccccc---cC-CHHHHH
Confidence            10  011148999999999999999999999999999999999999999 999999999999865432   22 345566


Q ss_pred             HhhhhccC-CCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          220 KATDYMAA-YKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       220 ~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ......|+ +|+++|||||++++||+|+.++|+|||.|.+|
T Consensus       236 ~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VD  276 (284)
T d1e7wa_         236 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD  276 (284)
T ss_dssp             HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEEC
Confidence            66677775 99999999999999999999999999999998

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=7.3e-47  Score=318.22  Aligned_cols=238  Identities=20%  Similarity=0.182  Sum_probs=197.9

Q ss_pred             CCcEEEEeC--CccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-C-----------CCeEEE----------
Q 024976           11 KGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-G-----------IPAIGL----------   66 (259)
Q Consensus        11 ~~k~~lItG--a~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~-----------~~v~~~----------   66 (259)
                      .+|++||||  +++|||+++|+.|+++|++|++.++.............+. .           .....+          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  5589999999999999999999998876544433332211 0           011222          


Q ss_pred             ----------EcCCCCHHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHH
Q 024976           67 ----------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY  134 (259)
Q Consensus        67 ----------~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  134 (259)
                                .+|+++.++++++++++.+.||+||+||||+|...  .+++.+.+.++|.+.+++|+++++.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      23667888899999999999999999999999754  357889999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCceEEEeccccccccCcc-chhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecccccCCccc---
Q 024976          135 LKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGV---  209 (259)
Q Consensus       135 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~i~pg~v~t~~~~---  209 (259)
                      |+++          |+||++||..+..+.+. ...|+++|+|+++|+|+|+.||+ + +|||||+|+||+++|+...   
T Consensus       161 m~~~----------GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela-~~~gIRVNaI~PG~i~T~a~~~i~  229 (329)
T d1uh5a_         161 MKPQ----------SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTISAGPLKSRAATAIN  229 (329)
T ss_dssp             EEEE----------EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCCCTTGGGCC
T ss_pred             cccc----------cccccceeehhcccccccchhhhhhhccccccchhhHHHHh-cccCcEEEEEecCcccchhhhccc
Confidence            9653          88999999999988876 46799999999999999999997 5 6999999999999983211   


Q ss_pred             ----------------------------------------CCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCC
Q 024976          210 ----------------------------------------SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV  249 (259)
Q Consensus       210 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  249 (259)
                                                              .....++..+...+..|++|+++|||||++++||+|+.++
T Consensus       230 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~  309 (329)
T d1uh5a_         230 KLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESR  309 (329)
T ss_dssp             ------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGT
T ss_pred             chhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhC
Confidence                                                    1112345666778889999999999999999999999999


Q ss_pred             cccccccccC
Q 024976          250 HRDLIHLLDD  259 (259)
Q Consensus       250 ~~tG~~i~~D  259 (259)
                      |+|||.|.+|
T Consensus       310 ~iTGq~i~VD  319 (329)
T d1uh5a_         310 AITGQTIYVD  319 (329)
T ss_dssp             TCCSCEEEES
T ss_pred             CccCCeEEEC
Confidence            9999999998

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.1e-45  Score=307.23  Aligned_cols=243  Identities=24%  Similarity=0.217  Sum_probs=198.6

Q ss_pred             CCCCCCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc---------CC--Ce-EEEEcC---
Q 024976            7 GDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL---------GI--PA-IGLEGD---   69 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~---------~~--~v-~~~~~D---   69 (259)
                      .++|+||++|||||+|  |||+++|+.|+++|++|++.+|+..............         +.  .. ....+|   
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            3679999999999876  9999999999999999999998765433322222111         00  11 122233   


Q ss_pred             -----------------CCCHHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCCHHHHHHHHhccchhHHHHHHH
Q 024976           70 -----------------VRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHE  130 (259)
Q Consensus        70 -----------------l~~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  130 (259)
                                       .++..+++++++++.+.||++|+||||||...  ..++.+.+.++|.+.+++|+.+++.++++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  162 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence                             24556678999999999999999999999753  46788999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCCCCCceEEEecccccc-ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCccc
Q 024976          131 ALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  209 (259)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~  209 (259)
                      +++.|.++          |+++++++.... ...+....|+++|+++.++++.++.|++.++|||||+|+||++.|++..
T Consensus       163 ~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~  232 (297)
T d1d7oa_         163 FLPIMNPG----------GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK  232 (297)
T ss_dssp             HGGGEEEE----------EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS
T ss_pred             HHHHhhcC----------CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhh
Confidence            99988765          556666665544 3446677899999999999999999996257999999999999988776


Q ss_pred             CCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          210 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      .....++..+...+..|++|+++|||||++++||+|+.++|+|||.|.+|
T Consensus       233 ~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vD  282 (297)
T d1d7oa_         233 AIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVD  282 (297)
T ss_dssp             CCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             hccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEEC
Confidence            65556777788888999999999999999999999999999999999998

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=5.7e-45  Score=299.53  Aligned_cols=239  Identities=23%  Similarity=0.206  Sum_probs=196.3

Q ss_pred             CCCCcEEEEeCCcc--chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~--giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++...+....+..+|++++++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            58999999999765  9999999999999999999999855 45556666666667888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCC----CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           87 FGKLDILVNAAAGNFLVP----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +|++|++|+|+|......    +.+..++.+...+.++..+.+.+.+.+.+.+..          ++.|+++|+.....+
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~i~~~s~~~~~~~  150 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN----------GASVLTLSYLGSTKY  150 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSB
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc----------Ccceeeecccccccc
Confidence            999999999999764432    223344445555555555555555444433221          255777777777788


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      .+....|+++|+|+.+|+|+++.|++ ++|||||+|+||++.|++.......++.........|.+|+++|+|||++++|
T Consensus       151 ~~~~~~y~asK~al~~ltr~lA~e~~-~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~f  229 (274)
T d2pd4a1         151 MAHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMY  229 (274)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             cccchhhhHHHHHHHHHHHhhHHHhc-CcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHH
Confidence            88889999999999999999999999 99999999999999987665555557777777888999999999999999999


Q ss_pred             hcCccCCcccccccccC
Q 024976          243 LASDAAVHRDLIHLLDD  259 (259)
Q Consensus       243 l~s~~~~~~tG~~i~~D  259 (259)
                      |+|+.+.|+|||.|.+|
T Consensus       230 L~S~~s~~itG~~i~vD  246 (274)
T d2pd4a1         230 LLSSLSSGVSGEVHFVD  246 (274)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhChhhCCCcCceEEEC
Confidence            99999999999999998

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-44  Score=297.69  Aligned_cols=218  Identities=24%  Similarity=0.283  Sum_probs=190.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +++|||||++|||+++|++|+++ |++|++++|+.+++++..++++..+.++.++.||++|.++++++++++.+.+|+||
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            56699999999999999999987 89999999999999999999998888899999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------  163 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  163 (259)
                      +||||||+....++.+.+.++|++.+++|++++++++|+++|.|+++          |+||++||..+..+.        
T Consensus        84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----------g~ivnisS~~~~~~~~~~~~y~~  153 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ----------GRVVNVSSIMSVRALKSCSPELQ  153 (275)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEECCHHHHHHHHTSCHHHH
T ss_pred             EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCcccccccceeccccccchhhh
Confidence            99999999888888888899999999999999999999999999654          899999997764322        


Q ss_pred             ---------------------------------ccchhhHHHHHHHHHHHHHHHHHhc---CCCCeEEEEEecccccCCc
Q 024976          164 ---------------------------------WYQIHVSAAKAAVDSITRSLALEWG---TDYAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       164 ---------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~---~~~gi~v~~i~pg~v~t~~  207 (259)
                                                       .+...|++||+++.+|++.+++|++   ...||+||+|+||++.|++
T Consensus       154 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m  233 (275)
T d1wmaa1         154 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  233 (275)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             hhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence                                             1234699999999999999999986   1359999999999999875


Q ss_pred             ccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhc--CccCCcccccccc
Q 024976          208 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA--SDAAVHRDLIHLL  257 (259)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--s~~~~~~tG~~i~  257 (259)
                      ....                 ...+|||+|++++|++  ++...+++|+.+.
T Consensus       234 ~~~~-----------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         234 AGPK-----------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             TCTT-----------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ccCc-----------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence            4321                 1347999999999986  5667778887653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=4.9e-43  Score=286.63  Aligned_cols=239  Identities=23%  Similarity=0.263  Sum_probs=196.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-HHHHHHHHHhc-CCCeEEEEcCCCC----HHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSL-GIPAIGLEGDVRK----REDAVRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~Dl~~----~~~~~~~~~~~~~~   86 (259)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++... +.+.....+|+.+    ++.++++++++.+.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999998654 56677777644 5567777665544    67788999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCC-----------CCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 024976           87 FGKLDILVNAAAGNFLVPAED-----------LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS  155 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is  155 (259)
                      +|++|++|||||+..+.++.+           ...+.+...+..|+.+.+...+...+.+.......   ...+.+++++
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  158 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWR---SRNLSVVNLC  158 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC----------CCCEEEEEEC
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccc---cccccchhhh
Confidence            999999999999876554322           23455778888999999999888888765432211   1247888999


Q ss_pred             cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCC-CCCHH
Q 024976          156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKW  234 (259)
Q Consensus       156 S~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  234 (259)
                      +..+..+.+++..|++||+|+++|+|+++.|++ ++|||||+|+||+++|+...    +++..+.+.+..|++| +++||
T Consensus       159 ~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~i~t~~~~----~~~~~~~~~~~~pl~r~~~~pe  233 (266)
T d1mxha_         159 DAMTDLPLPGFCVYTMAKHALGGLTRAAALELA-PRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAA  233 (266)
T ss_dssp             CGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCCSSS----CHHHHHHHHTTCTTTSCCBCHH
T ss_pred             hccccccCcchhhhhhhHHHHhhhHHHHHHHhC-ccCcEEEEeccCcEeccccC----CHHHHHHHHhcCCCCCCCCCHH
Confidence            999999999999999999999999999999999 99999999999999976432    4566677788889866 58999


Q ss_pred             HHHHHHHHhcCccCCcccccccccC
Q 024976          235 DIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       235 dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      |||++++||+|+.+.|+|||.|.+|
T Consensus       234 eva~~v~fL~s~~s~~itG~~i~vD  258 (266)
T d1mxha_         234 QIADAIAFLVSKDAGYITGTTLKVD  258 (266)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhCchhCCccCCeEEEC
Confidence            9999999999999999999999998

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.8e-43  Score=284.04  Aligned_cols=229  Identities=25%  Similarity=0.286  Sum_probs=188.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +|++|||||++|||+++|++|+++|++|++++|+++.            .+....++|+++......+.......+. .+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~   67 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEAP-LF   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHSC-EE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------ccceEeeccccchhhhHHHHHhhhcccc-cc
Confidence            5899999999999999999999999999999998652            3567889999999999999888776654 45


Q ss_pred             EEEECCCCCC----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           92 ILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        92 ~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      .++.+++...    .......+.+.|++.+++|+.+++.+++.+.+.+.+...  ......|+||++||..+..+.+...
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~~~G~Ii~isS~~~~~~~~~~~  145 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPP--DAEGQRGVIVNTASVAAFEGQIGQA  145 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCC--CTTSCSEEEEEECCTHHHHCCTTCH
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh--hcccCceeeeeecchhhccCCCCch
Confidence            5666665432    234456778899999999999999999999998654321  1112259999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCcc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                      .|+++|+|+++|+|+|+.|++ ++|||||+|+||+++|++... ...+...+......+.+|+++|||||++++||+|  
T Consensus       146 ~Y~asKaal~~lt~~lA~ela-~~gIrVN~V~PG~i~T~~~~~-~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--  221 (241)
T d1uaya_         146 AYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPFPPRLGRPEEYAALVLHILE--  221 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--
T ss_pred             hhHHHHHHHHHHHHHHHHHHh-hcCCceeeecCCcccccccch-hhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--
Confidence            999999999999999999999 999999999999999765443 3333333333333345899999999999999997  


Q ss_pred             CCcccccccccC
Q 024976          248 AVHRDLIHLLDD  259 (259)
Q Consensus       248 ~~~~tG~~i~~D  259 (259)
                      ++|+|||.|.+|
T Consensus       222 ~~~iTG~~i~VD  233 (241)
T d1uaya_         222 NPMLNGEVVRLD  233 (241)
T ss_dssp             CTTCCSCEEEES
T ss_pred             CCCCCCCEEEEC
Confidence            579999999998

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-42  Score=284.01  Aligned_cols=196  Identities=23%  Similarity=0.293  Sum_probs=180.8

Q ss_pred             CCCCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-cCCCeEEEEcCCCCHHHHHHHHHH
Q 024976            4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      ++.+.+|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.. .+..+..+.+|+++.+.+...++.
T Consensus         6 ~f~~~~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   85 (269)
T d1xu9a_           6 EFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ   85 (269)
T ss_dssp             CCCGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHH
Confidence            4555569999999999999999999999999999999999999999999888754 466788999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
                      +.+.+|.+|+++||||.....++.+.+.++|++.+++|+.+++.+++.++|+|+++.         |+||++||..+..+
T Consensus        86 ~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~---------G~ii~isS~~~~~~  156 (269)
T d1xu9a_          86 AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN---------GSIVVVSSLAGKVA  156 (269)
T ss_dssp             HHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEEEEGGGTSC
T ss_pred             HHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC---------CcceEeccchhcCC
Confidence            999999999999999998888899999999999999999999999999999998653         89999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcc
Q 024976          163 TWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAG  208 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~  208 (259)
                      .+....|++||+|+.+|+|+|+.|++ ...||+||+|+||+++|++.
T Consensus       157 ~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~  203 (269)
T d1xu9a_         157 YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA  203 (269)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHH
Confidence            99999999999999999999999986 24579999999999998653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=6.6e-43  Score=286.24  Aligned_cols=238  Identities=23%  Similarity=0.180  Sum_probs=196.4

Q ss_pred             CCCCCcEEEEeCC--ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         8 ~~l~~k~~lItGa--~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ..|+||++|||||  ++|||+++|++|+++|++|++++|+.+++.+...  ...+.+...++||+++++++.++++.+.+
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~--~~~~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT--DRLPAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH--TTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH--HHcCCceeeEeeecccccccccccchhhh
Confidence            4689999999994  5799999999999999999999998765433222  23466788999999999999999999987


Q ss_pred             Hc---CCccEEEECCCCCC-----CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           86 HF---GKLDILVNAAAGNF-----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        86 ~~---g~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                      .+   +.+|+++||+|+..     ..++.+.+.++|.+.+.+|+...+...+.+.+.+..           +.+++++|.
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~i~~~s~  148 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-----------GGSIVGMDF  148 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----------EEEEEEEEC
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc-----------ccccccccc
Confidence            65   57999999999653     235567888999999999999999998888776433           446666777


Q ss_pred             cccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC----CC------hHHHHHHhhhhccC
Q 024976          158 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LA------PEEIRSKATDYMAA  227 (259)
Q Consensus       158 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~----~~------~~~~~~~~~~~~~~  227 (259)
                      ....+.+.+..|+++|+|+.+|+|+++.|++ ++|||||+|+||++.|++....    ..      .+...+......|+
T Consensus       149 ~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl  227 (268)
T d2h7ma1         149 DPSRAMPAYNWMTVAKSALESVNRFVAREAG-KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI  227 (268)
T ss_dssp             CCSSCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT
T ss_pred             cccccCcccchhhccccchhhccccchhhhh-ccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCC
Confidence            7888888899999999999999999999999 9999999999999997653211    11      12233445566787


Q ss_pred             CC-CCCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          228 YK-FGEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       228 ~~-~~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      +| +++|+|+|+++.||+|+.+.|+|||.|.+|
T Consensus       228 ~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vD  260 (268)
T d2h7ma1         228 GWNMKDATPVAKTVCALLSDWLPATTGDIIYAD  260 (268)
T ss_dssp             CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEES
T ss_pred             CCCCCCHHHHHHHHHHHhCchhcCccCCEEEEC
Confidence            66 999999999999999999999999999998

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=6.6e-42  Score=277.09  Aligned_cols=196  Identities=19%  Similarity=0.196  Sum_probs=167.8

Q ss_pred             cEEEEeCCccchHHHHHHHHH---HcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH--Hc
Q 024976           13 KVALLTGGGSGIGFEISLQLG---KHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--HF   87 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~---~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~--~~   87 (259)
                      |++|||||++|||+++|++|+   ++|++|++++|+.++++++.+.. ..+.++.++.||++|+++++++++++.+  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-KNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-HHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-hcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            799999999999999999996   57999999999999888776544 3456899999999999999999999854  57


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCC---CCCCCCCCceEEEeccccccc--
Q 024976           88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR---GQASSSSGGIIINISATLHYT--  161 (259)
Q Consensus        88 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~~~~~~g~iv~isS~~~~~--  161 (259)
                      +++|+||||||+... .++.+.+.++|++.+++|+.+++.++|+++|+|+++..   .......+|++|+++|..+..  
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence            899999999998654 46778999999999999999999999999999986521   111223358999999988764  


Q ss_pred             -cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC
Q 024976          162 -ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  210 (259)
Q Consensus       162 -~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~  210 (259)
                       +.+++.+|++||+|+.+|+|+++.|++ ++||+||+|+||+++|++...
T Consensus       162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~-~~gI~vn~v~PG~v~T~m~~~  210 (248)
T d1snya_         162 NTDGGMYAYRTSKSALNAATKSLSVDLY-PQRIMCVSLHPGWVKTDMGGS  210 (248)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCSBCSTTTCT
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCCCcccCCcccc
Confidence             355678999999999999999999998 999999999999999876543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-42  Score=276.41  Aligned_cols=218  Identities=15%  Similarity=0.044  Sum_probs=186.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC--
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g--   88 (259)
                      +||++|||||++|||++++++|+++|++|++++++...          .......+.+|..+.++++.+.+++.+.++  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999987643          122355677889999999998888877654  


Q ss_pred             CccEEEECCCCCCC-CCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           89 KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        89 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ++|+||||||.... ..+.+.+.++|++.+++|+.++++++++++|+|++.          |+||++||..+..+.+.+.
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~----------G~Iv~isS~~~~~~~~~~~  140 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG----------GLLTLAGAKAALDGTPGMI  140 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCGGGGSCCTTBH
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc----------cceeEEccHHHcCCccCCc
Confidence            79999999997654 455667789999999999999999999999999653          8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          168 HVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      .|++||+|+.+|+|+|+.|++. ++|||||+|+||+++|++..+..+          ..+..++..||++++.+.||+++
T Consensus       141 ~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~----------~~~~~~~~~pe~va~~~~~l~s~  210 (236)
T d1dhra_         141 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP----------EADFSSWTPLEFLVETFHDWITG  210 (236)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST----------TSCGGGSEEHHHHHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc----------cchhhcCCCHHHHHHHHHHHhCC
Confidence            9999999999999999999972 479999999999999865432221          22345678899999999999999


Q ss_pred             cCCccccccccc
Q 024976          247 AAVHRDLIHLLD  258 (259)
Q Consensus       247 ~~~~~tG~~i~~  258 (259)
                      .+.++||+.|.+
T Consensus       211 ~~~~i~G~~i~v  222 (236)
T d1dhra_         211 NKRPNSGSLIQV  222 (236)
T ss_dssp             TTCCCTTCEEEE
T ss_pred             CccCCCCCeEEE
Confidence            999999997764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.1e-40  Score=267.49  Aligned_cols=226  Identities=17%  Similarity=0.168  Sum_probs=179.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ..|++|||||++|||+++|++|+++|+  +|++.+|+.++++++.+   ..+.++.++.+|++++++++++++++.+.++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            469999999999999999999999997  58888999887766443   2356799999999999999999999999876


Q ss_pred             --CccEEEECCCCCC-CCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCC---CCCCCCCCceEEEecccccccc
Q 024976           89 --KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR---GQASSSSGGIIINISATLHYTA  162 (259)
Q Consensus        89 --~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~~~~~~g~iv~isS~~~~~~  162 (259)
                        ++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++++.   ........++++++++......
T Consensus        79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence              4999999999764 467788999999999999999999999999999986532   2223344588999988765533


Q ss_pred             -------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHH
Q 024976          163 -------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD  235 (259)
Q Consensus       163 -------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  235 (259)
                             ..+..+|++||+|+.+|+++|+.|++ ++||+||+|+||+++|++..+.                 ...+|||
T Consensus       159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~-~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~~e~  220 (250)
T d1yo6a1         159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPGWVQTNLGGKN-----------------AALTVEQ  220 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECCCC------------------------------HH
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCCCCCCCCC-----------------CCCCHHH
Confidence                   23456799999999999999999998 8999999999999998653211                 1247899


Q ss_pred             HHHHHHHhcCccCCcccccccc
Q 024976          236 IAMAALYLASDAAVHRDLIHLL  257 (259)
Q Consensus       236 va~~~~~l~s~~~~~~tG~~i~  257 (259)
                      .++.++..+.......+|..+.
T Consensus       221 ~a~~~~~~~~~~~~~~sG~f~~  242 (250)
T d1yo6a1         221 STAELISSFNKLDNSHNGRFFM  242 (250)
T ss_dssp             HHHHHHHHHTTCCGGGTTCEEE
T ss_pred             HHHHHHHHHhcCCCCCCeEEEC
Confidence            9998888887655556776553

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=9.3e-40  Score=265.75  Aligned_cols=222  Identities=20%  Similarity=0.214  Sum_probs=163.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-CCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-g~id   91 (259)
                      |++|||||++|||+++|++|+++|++|++++|+.++                 ..+|+++.+..+....+..... +.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999999999997542                 3679999999988876666554 6799


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCC-------------------CCCCceEE
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS-------------------SSSGGIII  152 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~-------------------~~~~g~iv  152 (259)
                      ++++|||+...       .+.|.+...+|..+...+.+...+.+.+.......                   ....|+++
T Consensus        65 ~lv~~Ag~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  137 (257)
T d1fjha_          65 GLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEEEcCCCCCc-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence            99999996432       23467788899999999999999988776441000                   00012333


Q ss_pred             EeccccccccC-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhh-hhccCCCC
Q 024976          153 NISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKF  230 (259)
Q Consensus       153 ~isS~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~  230 (259)
                      +++|..+..+. ++..+|++||+|+++|+|+++.||+ ++|||||+|+||+++|++......+++..+... ...|++|+
T Consensus       138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~  216 (257)
T d1fjha_         138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC---------------------CCCSTTSC
T ss_pred             EEeeehhccCCCcchHHHHHHhhhhhccccccccccc-cccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCC
Confidence            33333333322 3456799999999999999999999 999999999999999887666555555444443 34699999


Q ss_pred             CCHHHHHHHHHHhcCccCCcccccccccC
Q 024976          231 GEKWDIAMAALYLASDAAVHRDLIHLLDD  259 (259)
Q Consensus       231 ~~~~dva~~~~~l~s~~~~~~tG~~i~~D  259 (259)
                      ++|||||+++.||+|+.++|+|||.|.+|
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vD  245 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVID  245 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeC
Confidence            99999999999999999999999999998

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=9.2e-40  Score=262.34  Aligned_cols=217  Identities=18%  Similarity=0.083  Sum_probs=180.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH--cCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH--FGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~--~g~   89 (259)
                      .++||||||++|||++++++|+++|++|++++|+.++.          ......+.+|..+.++.....+.+...  +|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            35679999999999999999999999999999986531          123456678888888888777777664  489


Q ss_pred             ccEEEECCCCCCCC-CCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           90 LDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        90 id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ||+||||||..... ++.+.+.++|+..+++|+.+++.++|+++|+|++.          |+||++||..+..+.+++..
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~----------g~Iv~isS~~~~~~~~~~~~  141 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG----------GLLQLTGAAAAMGPTPSMIG  141 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCGGGGSCCTTBHH
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc----------eEEEEeccHHhcCCcccccc
Confidence            99999999986553 45566678899999999999999999999999653          88999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHH-HhcCc
Q 024976          169 VSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL-YLASD  246 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~l~s~  246 (259)
                      |++||+|+++|+|+|+.|++ ...||+||+|+||.++|++....+          ...+..++.+|+|+++.++ |+.++
T Consensus       142 Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~----------~~~~~~~~~~~~~va~~~~~~l~~~  211 (235)
T d1ooea_         142 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM----------PNADHSSWTPLSFISEHLLKWTTET  211 (235)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS----------TTCCGGGCBCHHHHHHHHHHHHHCG
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhC----------cCCccccCCCHHHHHHHHHHHhcCc
Confidence            99999999999999999996 247899999999999976543222          1223456789999999987 56677


Q ss_pred             cCCccccccccc
Q 024976          247 AAVHRDLIHLLD  258 (259)
Q Consensus       247 ~~~~~tG~~i~~  258 (259)
                      ..+++||+.|.+
T Consensus       212 ~~~~~tG~~i~v  223 (235)
T d1ooea_         212 SSRPSSGALLKI  223 (235)
T ss_dssp             GGCCCTTCEEEE
T ss_pred             cccCCCceEEEE
Confidence            888999999876

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=1.4e-33  Score=229.36  Aligned_cols=213  Identities=15%  Similarity=0.078  Sum_probs=170.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh---hhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .++++|||||++|||++++++|+++|+ +|++++|+.   +..++..+++...+.++.++.||++|+++++++++++.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            467999999999999999999999999 588899863   4566777778777889999999999999999999987654


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                       +++|++|||+|.....++.+.++++|+..+++|+.+++++.+++.    ...        .++||++||..+..+.+++
T Consensus        88 -~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~~--------~~~iv~~SS~a~~~g~~~~  154 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR----ELD--------LTAFVLFSSFASAFGAPGL  154 (259)
T ss_dssp             -SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSC--------CSEEEEEEEHHHHTCCTTC
T ss_pred             -ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhh----ccC--------CceEeeecchhhccCCccc
Confidence             689999999999988999999999999999999999999877543    333        3889999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|+++|++++.|++.+    + ..|+++++|+||.+.++.+....    ..+.+..  ......+|+++++++..++..
T Consensus       155 ~~YaAaka~l~~la~~~----~-~~Gi~v~~I~pg~~~~~g~~~~~----~~~~~~~--~G~~~~~~~~~~~~l~~~l~~  223 (259)
T d2fr1a1         155 GGYAPGNAYLDGLAQQR----R-SDGLPATAVAWGTWAGSGMAEGP----VADRFRR--HGVIEMPPETACRALQNALDR  223 (259)
T ss_dssp             TTTHHHHHHHHHHHHHH----H-HTTCCCEEEEECCBC----------------CTT--TTEECBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhHHHHHHHH----H-hCCCCEEECCCCcccCCccccch----HHHHHHh--cCCCCCCHHHHHHHHHHHHhC
Confidence            99999999998877655    4 45799999999999755443221    1111111  011245899999999888764


Q ss_pred             c
Q 024976          247 A  247 (259)
Q Consensus       247 ~  247 (259)
                      .
T Consensus       224 ~  224 (259)
T d2fr1a1         224 A  224 (259)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.3e-21  Score=165.30  Aligned_cols=212  Identities=15%  Similarity=0.080  Sum_probs=148.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-----hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-----~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      |+||||||+|.||++++++|.++|++|++++|...     +++....+......++.++++|++|.++++++++..    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            79999999999999999999999999999998543     233333333334567999999999999999999875    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------  161 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  161 (259)
                       .+|+++|+|+......    +.++.+..+++|+.++.++++++...-.+.         ..++|++||...+-      
T Consensus        78 -~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~~~~---------~~r~i~~SS~~vYG~~~~~~  143 (357)
T d1db3a_          78 -QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLGLEK---------KTRFYQASTSELYGLVQEIP  143 (357)
T ss_dssp             -CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGGTTCCSSS
T ss_pred             -CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhCCCC---------CcEEEEEEchhhhCCCCCCC
Confidence             6899999999754332    334566788999999999999886542221         15799999865431      


Q ss_pred             -----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhh----hhc---c---
Q 024976          162 -----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT----DYM---A---  226 (259)
Q Consensus       162 -----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~----~~~---~---  226 (259)
                           +..+...|+.||.+.+.+++.++..++    +++..+.|+.+..|.......+......+.    ...   .   
T Consensus       144 ~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~----l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~  219 (357)
T d1db3a_         144 QKETTPFYPRSPYAVAKLYAYWITVNYRESYG----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGN  219 (357)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESC
T ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHhC----CCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECC
Confidence                 123456799999999999999988764    899999999998775433332222222211    111   1   


Q ss_pred             ---CCCCCCHHHHHHHHHHhcCc
Q 024976          227 ---AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 ---~~~~~~~~dva~~~~~l~s~  246 (259)
                         ..-+...+|+++++..++..
T Consensus       220 ~~~~r~~~~v~D~~~a~~~~~~~  242 (357)
T d1db3a_         220 MDSLRDWGHAKDYVKMQWMMLQQ  242 (357)
T ss_dssp             TTCEECCEEHHHHHHHHHHTTSS
T ss_pred             CCeeecceeechHHHHHHHHHhC
Confidence               11256799999999888754

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.84  E-value=3.2e-22  Score=154.31  Aligned_cols=155  Identities=14%  Similarity=0.138  Sum_probs=115.0

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..+|+||+++||||++|||+++++.|+++|++|++++|+.+++++..+++... .++.+..+|+++.+++++++      
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh------
Confidence            46899999999999999999999999999999999999999999988888653 24667889999999887765      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                       +++|+||||+|..    +...+.++|+..+++|+.+.+++...+.+.+.....       .++++..++..+..+ .+.
T Consensus        91 -~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g~~~-~g~  157 (191)
T d1luaa1          91 -KGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATD-------KGKEYGGKRAFGALG-IGG  157 (191)
T ss_dssp             -TTCSEEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTC-------EEEEETTEEEECHHH-HHH
T ss_pred             -cCcCeeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhcc-------CcEEecceEEEeccC-cCc
Confidence             5799999999963    345788999999999998887765443322211110       123332222212111 234


Q ss_pred             hhhHHHHHHHHHHHH
Q 024976          167 IHVSAAKAAVDSITR  181 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~  181 (259)
                      ..|+++|+++..|.+
T Consensus       158 ~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         158 LKLKLHRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHh
Confidence            569999999887764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=8.1e-18  Score=143.32  Aligned_cols=175  Identities=14%  Similarity=0.175  Sum_probs=128.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh----------------hhHHHHHHHHH-hcCCCeEEEEcCCCCHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK----------------TVLRSAVAALH-SLGIPAIGLEGDVRKRE   74 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~----------------~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~   74 (259)
                      |++||||||+|.||.+++++|+++|++|+++|.-.                ........... ..+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            68999999999999999999999999999987211                11111112221 22457999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 024976           75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI  154 (259)
Q Consensus        75 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i  154 (259)
                      .++++++..     ++|+|||.|+.... +....+.+.....+++|+.++.++++++...-.+           .++++.
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-----------~~~i~~  143 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE-----------CHLVKL  143 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT-----------CEEEEE
T ss_pred             HHHHHHHhh-----cchheecccccccc-ccccccccccccccccccccccHHHHHHHHhccc-----------cceeec
Confidence            999999865     69999999986321 1122355667788999999999999988754222           346666


Q ss_pred             cccccccc------------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc
Q 024976          155 SATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       155 sS~~~~~~------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~  207 (259)
                      ||...+..                        ..+...|+.+|.+.+.+++.+..++.    +++..+.|+.+..+.
T Consensus       144 ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~----l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         144 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG----IRATDLNQGVVYGVK  216 (393)
T ss_dssp             CCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECEEECSC
T ss_pred             cccccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccc----eeeeecccccccCCC
Confidence            66544321                        12234699999999999998888764    899999998887653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.3e-18  Score=144.20  Aligned_cols=212  Identities=15%  Similarity=0.079  Sum_probs=145.8

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-----hHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-----~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      |++|||||+|.||++++++|.++|++|+.++|+.+     +++....... ....++.++.+|++|.+.+.++++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            44599999999999999999999999999998643     1222111111 12346899999999999999998765   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----  161 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  161 (259)
                        .+++++|.++.....    ...+.....+++|+.++.++++++......+         ..++|++||...+.     
T Consensus        79 --~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~---------~~~~i~~SS~~vyg~~~~~  143 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN---------SVKFYQASTSELYGKVQEI  143 (347)
T ss_dssp             --CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGTCSCSSS
T ss_pred             --ccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCCCC---------CcEEEEecchheecCCCCC
Confidence              688999998853221    2334456778999999999998886543322         15799999866431     


Q ss_pred             ------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhh----hhcc-----
Q 024976          162 ------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT----DYMA-----  226 (259)
Q Consensus       162 ------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~----~~~~-----  226 (259)
                            +..+...|+.||.+.+.+++.++..+.    +.+..++|+.+..|..............+.    ...+     
T Consensus       144 ~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~----~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g  219 (347)
T d1t2aa_         144 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN----LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG  219 (347)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEES
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC----CCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecC
Confidence                  122345799999999999998887764    888999998888764433332222222111    1111     


Q ss_pred             ----CCCCCCHHHHHHHHHHhcCc
Q 024976          227 ----AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 ----~~~~~~~~dva~~~~~l~s~  246 (259)
                          ..-+...+|+++++..++..
T Consensus       220 ~g~~~r~~i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         220 NLDAKRDWGHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             CTTCEECCEEHHHHHHHHHHHHHS
T ss_pred             CCcceeeeeEecHHHHHHHHHhhc
Confidence                12356789999999988754

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.78  E-value=1.5e-18  Score=146.39  Aligned_cols=216  Identities=18%  Similarity=0.101  Sum_probs=147.9

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeE-EEEeCChhhH-HHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAI-AIMGRRKTVL-RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~v-v~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +||||||+|.||++++++|++.|++| +++++..... ....+.+ ....++.++++|++|.+.+..+++..     .+|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence            68999999999999999999999985 4555432111 0111111 11347999999999999999998754     699


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------  162 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  162 (259)
                      +|||+|+.....    .+.++....+++|+.++.++++++...........   ....++|++||...+..         
T Consensus        76 ~VihlAa~~~~~----~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (361)
T d1kewa_          76 AVMHLAAESHVD----RSITGPAAFIETNIVGTYALLEVARKYWSALGEDK---KNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             EEEECCSCCCHH----HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHH---HHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             EEEECccccchh----hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---cCceEEEEeccceeeCCCccCCcccc
Confidence            999999953211    12334467899999999999999988654310000   00157999999775421         


Q ss_pred             ------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccC---
Q 024976          163 ------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA---  227 (259)
Q Consensus       163 ------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---  227 (259)
                                  ..+...|+.||.+.+.+++.++..++    +++..++|+.+..|.......-..+........+.   
T Consensus       149 ~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~----i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~  224 (361)
T d1kewa_         149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYG----LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEE
T ss_pred             ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC----CCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEe
Confidence                        12345699999999999999987664    99999999999977554332222333322222221   


Q ss_pred             C------CCCCHHHHHHHHHHhcCc
Q 024976          228 Y------KFGEKWDIAMAALYLASD  246 (259)
Q Consensus       228 ~------~~~~~~dva~~~~~l~s~  246 (259)
                      +      .+...+|+++++..++..
T Consensus       225 g~g~~~r~~i~v~D~a~ai~~~~~~  249 (361)
T d1kewa_         225 GKGDQIRDWLYVEDHARALHMVVTE  249 (361)
T ss_dssp             TTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred             CCCCeEEeCEEHHHHHHHHHHHHhc
Confidence            1      246799999999888753

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.77  E-value=4.3e-18  Score=142.48  Aligned_cols=207  Identities=15%  Similarity=0.053  Sum_probs=143.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +||+||||||+|.||.+++++|+++|++|+.+.|+.++...+.+.....  ......+..|++|.+++.+++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            4899999999999999999999999999999999887766655433222  2334567799999988777653       


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------  162 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------  162 (259)
                      .+|+++|+++....    ..+   ....+..|+.++.++++++...   ...        .++|++||..+...      
T Consensus        83 ~~~~v~~~a~~~~~----~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v--------~~~i~~SS~~~~~~~~~~~~  144 (342)
T d1y1pa1          83 GAAGVAHIASVVSF----SNK---YDEVVTPAIGGTLNALRAAAAT---PSV--------KRFVLTSSTVSALIPKPNVE  144 (342)
T ss_dssp             TCSEEEECCCCCSC----CSC---HHHHHHHHHHHHHHHHHHHHTC---TTC--------CEEEEECCGGGTCCCCTTCC
T ss_pred             cchhhhhhcccccc----ccc---ccccccchhhhHHHHHHhhhcc---ccc--------ccccccccceeeccCCCCCC
Confidence            68999999995432    122   3456778999999998887642   111        57999999654211      


Q ss_pred             -------------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh---
Q 024976          163 -------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---  214 (259)
Q Consensus       163 -------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~---  214 (259)
                                               ..+...|+.+|.+.+.+++.+.++.+  .++++..++|+.+..+........   
T Consensus       145 ~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~~i~p~~v~Gp~~~~~~~~~~~  222 (342)
T d1y1pa1         145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK--PHFTLNAVLPNYTIGTIFDPETQSGST  222 (342)
T ss_dssp             CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC--CSSEEEEEEESEEECCCSCTTTCCCHH
T ss_pred             CccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc--cccccceecccceeCCCCCccccccch
Confidence                                     11234699999999999999988863  568889999988876543222211   


Q ss_pred             HHHHHHhhhh--------ccCCCCCCHHHHHHHHHHhc
Q 024976          215 EEIRSKATDY--------MAAYKFGEKWDIAMAALYLA  244 (259)
Q Consensus       215 ~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~  244 (259)
                      ......+.+.        .+...+...+|+|++.+..+
T Consensus       223 ~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l  260 (342)
T d1y1pa1         223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCL  260 (342)
T ss_dssp             HHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhh
Confidence            1122211111        11112567889999977655

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=2e-17  Score=137.85  Aligned_cols=216  Identities=14%  Similarity=0.063  Sum_probs=148.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-----hHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-----~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .|++|||||+|.||++++++|+++|++|+.++|..+     +...+....... ...+.++.+|+++.+++.+.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            389999999999999999999999999999998532     222221111111 235889999999999999998764  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----  161 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  161 (259)
                         ++|+|||+|+.....    ...++....++.|+.+...+..++.....+...       ..++++.||.....    
T Consensus        79 ---~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ss~~~~~~~~~  144 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-------TVKYYQAGSSEMFGSTPP  144 (339)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-------CCEEEEEEEGGGGTTSCS
T ss_pred             ---ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhccccccc-------ceeeeecccceecccCCC
Confidence               799999999953221    123455678899999999999998876554321       13455555544321    


Q ss_pred             ------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHH----hhhhcc-----
Q 024976          162 ------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK----ATDYMA-----  226 (259)
Q Consensus       162 ------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~----~~~~~~-----  226 (259)
                            +..+...|+.+|.+.+.+++.....++    +++..++|+.+..|..............    .....+     
T Consensus       145 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~----~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g  220 (339)
T d1n7ha_         145 PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG----LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLG  220 (339)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEES
T ss_pred             CCCCCCCCCCcchhhHHHHHHHHHHHHHHHHhC----CCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeC
Confidence                  223456899999999999998887664    9999999999987654433322222211    111111     


Q ss_pred             ----CCCCCCHHHHHHHHHHhcCcc
Q 024976          227 ----AYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       227 ----~~~~~~~~dva~~~~~l~s~~  247 (259)
                          ..-+...+|+++++..++...
T Consensus       221 ~~~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         221 NLQASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             CTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             CCCccccceeeehHHHHHHHHHhcC
Confidence                112567899999999888654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=4.8e-18  Score=141.95  Aligned_cols=168  Identities=17%  Similarity=0.105  Sum_probs=127.0

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh---HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV---LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~---~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++|||||+|.||+++++.|+++|++|++++|-...   .....+...  ..++.++++|++|.+.+.++++..     ++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence            59999999999999999999999999999763221   112222222  346999999999999999998753     69


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------  163 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  163 (259)
                      |+|||+|+.....    .+.++.+..+++|+.++.++++++...-    .        .++|++||...+.+.       
T Consensus        75 d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~~~~----v--------~~~i~~Ss~~vy~~~~~~~~~e  138 (338)
T d1udca_          75 DTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRAAN----V--------KNFIFSSSATVYGDQPKIPYVE  138 (338)
T ss_dssp             SEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHT----C--------CEEEEEEEGGGGCSCCSSSBCT
T ss_pred             CEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHHHHhC----C--------CEEEecCcceEEcccccccccc
Confidence            9999999953211    2234456889999999999999887642    1        458888887755221       


Q ss_pred             -----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCc
Q 024976          164 -----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  207 (259)
Q Consensus       164 -----~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~  207 (259)
                           .+...|+.+|.+.+.+.+....+.   .++.+..++|+.+.++.
T Consensus       139 ~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         139 SFPTGTPQSPYGKSKLMVEQILTDLQKAQ---PDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             TSCCCCCSSHHHHHHHHHHHHHHHHHHHS---TTCEEEEEEECEEECCC
T ss_pred             ccccCCCcchHHHHHhhhhHHHHHHHhhc---cCCeEEEEeeccEEecc
Confidence                 345679999999999999877764   36888899988887653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.76  E-value=1.1e-17  Score=138.44  Aligned_cols=209  Identities=15%  Similarity=0.061  Sum_probs=144.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHH-HHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR-SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      |+||||||+|.||++++++|.++|++|+.++|+..... ...+.+ ....++.++.+|++|.+.+.+.+...     ..+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   74 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMADACSVQRAVIKA-----QPQ   74 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHh-cccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence            78999999999999999999999999999998653211 112222 12346899999999999999988765     678


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-----------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----------  160 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------  160 (259)
                      +++++++......    ..++....++.|+.++.++++++...-.+           .++++.||...+           
T Consensus        75 ~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~~~~~-----------~~~i~~Ss~~~~~~~~~~~~~E~  139 (321)
T d1rpna_          75 EVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQFSPE-----------TRFYQASTSEMFGLIQAERQDEN  139 (321)
T ss_dssp             EEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHHCTT-----------SEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ccccccccccccc----cccchHHHHhhhhhchHHHHHHHHHhCCC-----------cccccccchhhcCcccCCCCCCC
Confidence            8888887532211    11335677899999999998888654222           346666665432           


Q ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHH----HHHHhhhh-cc--CC-----
Q 024976          161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE----IRSKATDY-MA--AY-----  228 (259)
Q Consensus       161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~----~~~~~~~~-~~--~~-----  228 (259)
                      .+..+...|+.+|.+.+.+.+.++.++.    +++..+.|+.+..|..........    ........ .+  .+     
T Consensus       140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~  215 (321)
T d1rpna_         140 TPFYPRSPYGVAKLYGHWITVNYRESFG----LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAK  215 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCE
T ss_pred             CCccccChhHHHHHHHHHHHHHHHhhcC----CcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeE
Confidence            1223456799999999999999988764    888999998887665433322211    11111111 11  11     


Q ss_pred             -CCCCHHHHHHHHHHhcCc
Q 024976          229 -KFGEKWDIAMAALYLASD  246 (259)
Q Consensus       229 -~~~~~~dva~~~~~l~s~  246 (259)
                       .+...+|+++++..++..
T Consensus       216 r~~i~v~D~~~~~~~~~~~  234 (321)
T d1rpna_         216 RDWGFAGDYVEAMWLMLQQ  234 (321)
T ss_dssp             EECEEHHHHHHHHHHHHHS
T ss_pred             EccEEeHHHHHHHHHHHhc
Confidence             257799999999998743

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=1.1e-17  Score=140.20  Aligned_cols=170  Identities=16%  Similarity=0.058  Sum_probs=125.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh-HHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      |+||||||+|.||++++++|+++|++|+++++.... .......-.....++.++++|++|.++++.+++..     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            789999999999999999999999999998753221 12211111122446889999999999999988753     699


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----------  161 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  161 (259)
                      +|||+|+.....    ...+.......+|+.++.++++++...    +.        -++|++||...+.          
T Consensus        77 ~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~~~~----~i--------~~~i~~SS~~vyg~~~~~~~~~~  140 (347)
T d1z45a2          77 SVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELMQQY----NV--------SKFVFSSSATVYGDATRFPNMIP  140 (347)
T ss_dssp             EEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHH----TC--------CEEEEEEEGGGGCCGGGSTTCCS
T ss_pred             EEEEcccccccc----ccccCcccccccchhhhHHHHHHHHhc----cc--------ceEEeecceeeecCcccCCCCCc
Confidence            999999954211    122334677889999999999998643    21        4599999966542          


Q ss_pred             -----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccC
Q 024976          162 -----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  205 (259)
Q Consensus       162 -----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t  205 (259)
                           +..+...|+.+|.+.+.+.+.+....  ..++++..++|+.+..
T Consensus       141 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         141 IPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPIG  187 (347)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEEC
T ss_pred             cccccCCCCCChhHhHHHHHHHHHHHHHHhh--ccCCcEEEEeecceEe
Confidence                 12234579999999999999887764  5578888888766653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.5e-16  Score=123.54  Aligned_cols=194  Identities=15%  Similarity=0.108  Sum_probs=126.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ..|+++||||+|+||++++++|+++|++|.++.|+.+++...      ....+.++.+|++|.+++.++++       +.
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------~~   68 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQ   68 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc-------CC
Confidence            357899999999999999999999999999999997764321      13458899999999999887765       68


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc----cc
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQ  166 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----~~  166 (259)
                      |+||+++|........           +++..+..++    ++.+++.+.        .++|++||........    ..
T Consensus        69 d~vi~~~g~~~~~~~~-----------~~~~~~~~~l----~~aa~~~~v--------~r~i~~ss~~~~~~~~~~~~~~  125 (205)
T d1hdoa_          69 DAVIVLLGTRNDLSPT-----------TVMSEGARNI----VAAMKAHGV--------DKVVACTSAFLLWDPTKVPPRL  125 (205)
T ss_dssp             SEEEECCCCTTCCSCC-----------CHHHHHHHHH----HHHHHHHTC--------CEEEEECCGGGTSCTTCSCGGG
T ss_pred             CEEEEEeccCCchhhh-----------hhhHHHHHHH----HHHHHhcCC--------CeEEEEeeeeccCCCccccccc
Confidence            9999999964322111           1223344444    444455543        6799998876543322    22


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHHHHhcCc
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  246 (259)
                      ..|...|...+.+.       . ..|++...|+||.+.........      ....+......+.+.+|+|+.++.++..
T Consensus       126 ~~~~~~~~~~e~~l-------~-~~~~~~tiirp~~~~~~~~~~~~------~~~~~~~~~~~~i~~~DvA~~~~~~l~~  191 (205)
T d1hdoa_         126 QAVTDDHIRMHKVL-------R-ESGLKYVAVMPPHIGDQPLTGAY------TVTLDGRGPSRVISKHDLGHFMLRCLTT  191 (205)
T ss_dssp             HHHHHHHHHHHHHH-------H-HTCSEEEEECCSEEECCCCCSCC------EEESSSCSSCSEEEHHHHHHHHHHTTSC
T ss_pred             cccchHHHHHHHHH-------H-hcCCceEEEecceecCCCCcccE------EEeeCCCCCCCcCCHHHHHHHHHHHhCC
Confidence            34555555544332       2 45799999999988632221110      0011111223356899999999999965


Q ss_pred             cCCccccccc
Q 024976          247 AAVHRDLIHL  256 (259)
Q Consensus       247 ~~~~~tG~~i  256 (259)
                      .. + .|+.+
T Consensus       192 ~~-~-~g~~~  199 (205)
T d1hdoa_         192 DE-Y-DGHST  199 (205)
T ss_dssp             ST-T-TTCEE
T ss_pred             CC-C-CCEEE
Confidence            43 2 36554

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=6.8e-17  Score=134.95  Aligned_cols=210  Identities=16%  Similarity=0.025  Sum_probs=146.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh----hHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT----VLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~----~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .+.|++|||||+|.||++++++|.++|++|++++|...    ..+....... ....++.++.+|+.|........    
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----   89 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----   89 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH----
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc----
Confidence            35689999999999999999999999999999986322    2222211111 11246899999999998766554    


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--
Q 024976           85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--  162 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  162 (259)
                         ...+.++|.++.....    ...++....+++|+.++.++++++...    +.        .++|++||...+..  
T Consensus        90 ---~~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~--------~~~i~~SS~~vyg~~~  150 (341)
T d1sb8a_          90 ---AGVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----KV--------QSFTYAASSSTYGDHP  150 (341)
T ss_dssp             ---TTCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----TC--------SEEEEEEEGGGGTTCC
T ss_pred             ---cccccccccccccccc----ccccCccchhheeehhHHHHHHHHHhc----CC--------ceEEEcccceeeCCCC
Confidence               3688888888743211    234566789999999999999988643    22        46999999775532  


Q ss_pred             ---------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh----HHHHHHhhhhc----
Q 024976          163 ---------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP----EEIRSKATDYM----  225 (259)
Q Consensus       163 ---------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~----~~~~~~~~~~~----  225 (259)
                               ..+...|+.+|.+.+.+++.+...++    +++..++|+.+.++........    ...........    
T Consensus       151 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~----i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~  226 (341)
T d1sb8a_         151 GLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYG----FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYI  226 (341)
T ss_dssp             CSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEE
T ss_pred             CCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHhC----CCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEE
Confidence                     23346899999999999999988764    8899999998886654333221    11222222111    


Q ss_pred             -----cCCCCCCHHHHHHHHHHhcCc
Q 024976          226 -----AAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       226 -----~~~~~~~~~dva~~~~~l~s~  246 (259)
                           +...+...+|++.++..++..
T Consensus       227 ~g~g~~~r~~i~v~D~~~a~~~~~~~  252 (341)
T d1sb8a_         227 NGDGETSRDFCYIENTVQANLLAATA  252 (341)
T ss_dssp             ESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEEEEEeccchhhhhhhhc
Confidence                 112367789999998887654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.71  E-value=3.6e-16  Score=129.80  Aligned_cols=164  Identities=18%  Similarity=0.133  Sum_probs=116.5

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh-hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      +||||||+|.||++++++|+++|++|+++++-.. ........+.. ..++.++.+|+++.+++.++++..     ++|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~   75 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPDS   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhc-----CCce
Confidence            5899999999999999999999999999875322 12222333332 356899999999999999998765     6899


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------  162 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  162 (259)
                      |||+|+.....    ...++....+++|+.|+.++++++...-.            .+.++.||.....+          
T Consensus        76 Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~~~------------~~~i~~sS~~~~~~~~~~~~~~~~  139 (338)
T d1orra_          76 CFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQYNS------------NCNIIYSSTNKVYGDLEQYKYNET  139 (338)
T ss_dssp             EEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHCT------------TCEEEEEEEGGGGTTCTTSCEEEC
T ss_pred             EEeeccccccc----ccccChHHHHHHHHHHHHHHHHhhhcccc------------cccccccccccccccccccccccc
Confidence            99999964321    12234578899999999999988765321            23455555433211          


Q ss_pred             ------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccc
Q 024976          163 ------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  203 (259)
Q Consensus       163 ------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v  203 (259)
                                        ..+...|+.+|...+.+.......+.    +....+.|..+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~----~~~~~~~~~~~  194 (338)
T d1orra_         140 ETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG----LNTVVFRHSSM  194 (338)
T ss_dssp             SSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCE
T ss_pred             cccccccccccCcccCCccccccccccccchhhhhhhhhhhccC----cccccccccce
Confidence                              12356799999999999998888775    44444444333

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=1.8e-16  Score=130.78  Aligned_cols=153  Identities=14%  Similarity=0.085  Sum_probs=118.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .|+||||||+|.||++++++|+++|+.|++++++.                    .+|+.+.+.+.++++.-     .+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~~-----~~d   56 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RID   56 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhhc-----CCC
Confidence            47899999999999999999999999888776542                    25899999999887642     699


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------  163 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  163 (259)
                      .++|+|+......   ....+..+.+++|+.++.++++++...    +.        .++|++||...+.+.        
T Consensus        57 ~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v--------~~~i~~SS~~vyg~~~~~~~~E~  121 (315)
T d1e6ua_          57 QVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAAHQN----DV--------NKLLFLGSSCIYPKLAKQPMAES  121 (315)
T ss_dssp             EEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT----TC--------CEEEEECCGGGSCTTCCSSBCGG
T ss_pred             EEEEcchhccccc---cchhhHHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEECCceEcCCCCCCCccCC
Confidence            9999997542211   123344566889999999998888643    21        469999998765321        


Q ss_pred             --------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcc
Q 024976          164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  208 (259)
Q Consensus       164 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~  208 (259)
                              +....|+.||.+.+.+++.+..+.    |+++..+.|+.+..|..
T Consensus       122 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         122 ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY----GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             GTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEESTTC
T ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEeeccEECCCC
Confidence                    234569999999999999998876    49999999999987654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.69  E-value=4e-16  Score=130.69  Aligned_cols=215  Identities=16%  Similarity=0.110  Sum_probs=149.0

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++||++|||||+|.||+++++.|+++|++|++++|+........+... ....+.++.+|++|.+.+.++++..     .
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~~-----~   79 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----Q   79 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-cccCCeEEEeeccChHhhhhhhhhc-----h
Confidence            689999999999999999999999999999999998665444333322 2346899999999999999988764     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------  161 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  161 (259)
                      +|+++|.++....    ....+.....+++|+.++.++++++...-..           ..+++.|+.....        
T Consensus        80 ~~~v~~~aa~~~~----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~-----------~~~~~~s~~~~~~~~~~~~~~  144 (356)
T d1rkxa_          80 PEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHVGGV-----------KAVVNITSDKCYDNKEWIWGY  144 (356)
T ss_dssp             CSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHHCCC-----------CEEEEECCGGGBCCCCSSSCB
T ss_pred             hhhhhhhhccccc----cccccCCccccccccccchhhhhhhhccccc-----------ccccccccccccccccccccc
Confidence            8999999985321    1223456778899999999999888753211           3455555443321        


Q ss_pred             ----cCccchhhHHHHHHHHHHHHHHHHHhc-----CCCCeEEEEEecccccCCcccCC-CChHHHHHHhhhhcc-----
Q 024976          162 ----ATWYQIHVSAAKAAVDSITRSLALEWG-----TDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMA-----  226 (259)
Q Consensus       162 ----~~~~~~~Y~~sK~a~~~l~~~la~e~~-----~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~~~-----  226 (259)
                          +..+...|+.+|...+.+.+..+.++.     ...++.+..+.|+.+..+..... ..............+     
T Consensus       145 ~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~  224 (356)
T d1rkxa_         145 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRN  224 (356)
T ss_dssp             CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSC
T ss_pred             ccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEee
Confidence                122455699999999999998888753     12368899999998886653221 112222322222211     


Q ss_pred             ---CCCCCCHHHHHHHHHHhcC
Q 024976          227 ---AYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       227 ---~~~~~~~~dva~~~~~l~s  245 (259)
                         ...+...+|++.++..++.
T Consensus       225 ~~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         225 PHAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             TTCEECCEETHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhhhhh
Confidence               1124557899999777754

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.69  E-value=4.7e-17  Score=136.22  Aligned_cols=204  Identities=17%  Similarity=0.081  Sum_probs=136.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh--h-hHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--T-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~--~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      -|+||||||+|.||++++++|.++|++|.+++++.  . ......+.  ..+.++.++.+|++|.+.+..++.       
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~~-------   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLAA-------   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHHT-------
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHHh-------
Confidence            36899999999999999999999998754443321  1 00000111  124579999999999999888764       


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------  162 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------  162 (259)
                      ..|.++|.|+......    ..++....+++|+.+..++++++...-             .++|++||...+..      
T Consensus        73 ~~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~~~~~-------------~k~i~~ss~~vyg~~~~~~~  135 (346)
T d1oc2a_          73 KADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAARKYD-------------IRFHHVSTDEVYGDLPLRED  135 (346)
T ss_dssp             TCSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHHHT-------------CEEEEEEEGGGGCCBCCGGG
T ss_pred             hhhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhhcccc-------------ccccccccceEecccCcccc
Confidence            6888999998543211    123345778999999999988775442             34777766654321      


Q ss_pred             -----------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhc
Q 024976          163 -----------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM  225 (259)
Q Consensus       163 -----------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  225 (259)
                                       ..+...|+.+|.+.+.+++.+..++    |+++..+.|+.+..|.......-...........
T Consensus       136 ~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~----~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~  211 (346)
T d1oc2a_         136 LPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATISNCSNNYGPYQHIEKFIPRQITNILAGI  211 (346)
T ss_dssp             STTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTC
T ss_pred             ccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc----CCCEEEEeecceeCCCCCccchhHHHHHHHHcCC
Confidence                             1233569999999999999888776    4999999999998764432222222222111111


Q ss_pred             ---------cCCCCCCHHHHHHHHHHhcC
Q 024976          226 ---------AAYKFGEKWDIAMAALYLAS  245 (259)
Q Consensus       226 ---------~~~~~~~~~dva~~~~~l~s  245 (259)
                               +...+...+|++++++.+..
T Consensus       212 ~~~i~~~g~~~r~~i~v~D~a~a~~~~~~  240 (346)
T d1oc2a_         212 KPKLYGEGKNVRDWIHTNDHSTGVWAILT  240 (346)
T ss_dssp             CCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred             ceeEeCCCCccccccchhhHHHHHHHHHh
Confidence                     11236778999999888764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=1.7e-16  Score=133.56  Aligned_cols=204  Identities=18%  Similarity=0.073  Sum_probs=142.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++++||||||+|.||++++++|.++|++|+++++.....      ....-....+..+|+.+.+.+.++++       .+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   80 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTEDMFCDEFHLVDLRVMENCLKVTE-------GV   80 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGGGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhhcccCcEEEeechhHHHHHHHhh-------cC
Confidence            688999999999999999999999999999998754321      00111245788899999988776653       68


Q ss_pred             cEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------
Q 024976           91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------  163 (259)
Q Consensus        91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  163 (259)
                      |.+||.|+......   ...+.....+..|+.++.+++.++...    +.        .++|++||...+...       
T Consensus        81 d~Vih~a~~~~~~~---~~~~~~~~~~~~n~~gt~~ll~~~~~~----~v--------k~~i~~SS~~~~~~~~~~~~~~  145 (363)
T d2c5aa1          81 DHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAARIN----GI--------KRFFYASSACIYPEFKQLETTN  145 (363)
T ss_dssp             SEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHHT----TC--------SEEEEEEEGGGSCGGGSSSSSS
T ss_pred             CeEeeccccccccc---ccccccccccccccchhhHHHHhHHhh----Cc--------cccccccccccccccccccccc
Confidence            99999998643321   112345677888999999998887653    22        469999997765321       


Q ss_pred             -----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCCh-----HHHHHHhhhhc--
Q 024976          164 -----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-----EEIRSKATDYM--  225 (259)
Q Consensus       164 -----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~-----~~~~~~~~~~~--  225 (259)
                                 .+...|+.+|.+.+.+++.+..+++    +++..++|+.+..+........     ...........  
T Consensus       146 ~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~g----l~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (363)
T d2c5aa1         146 VSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFG----IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF  221 (363)
T ss_dssp             CEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCE
T ss_pred             cccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhC----CCEEEEEeeeEeccCCcccccccccccccccccccccccc
Confidence                       2345799999999999998887764    9999999999986643322221     11111111111  


Q ss_pred             -------cCCCCCCHHHHHHHHHHhcCc
Q 024976          226 -------AAYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       226 -------~~~~~~~~~dva~~~~~l~s~  246 (259)
                             +...+...+|+++++..++..
T Consensus       222 ~~~g~g~~~rd~i~v~D~~~~~~~~~~~  249 (363)
T d2c5aa1         222 EMWGDGLQTRSFTFIDECVEGVLRLTKS  249 (363)
T ss_dssp             EEESCSCCEECCEEHHHHHHHHHHHHHS
T ss_pred             cccCCCCeEEEEeehhHHHHHHHHHHhC
Confidence                   122367889999999988753

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.4e-16  Score=130.82  Aligned_cols=170  Identities=15%  Similarity=0.062  Sum_probs=123.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC------hhhHHHHHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------KTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~------~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      |+||||||+|.||++++++|+++|++|+++++.      ........+.+. ....++.++++|++|.+.+.+++..   
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence            789999999999999999999999999998641      111111112221 1245789999999999999998865   


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---  162 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  162 (259)
                        ..+++++|.|+.....    ...++....+++|+.++.++++++..    .+.        .++++.||...+..   
T Consensus        80 --~~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v--------~~~i~~ss~~~~~~~~~  141 (346)
T d1ek6a_          80 --YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKA----HGV--------KNLVFSSSATVYGNPQY  141 (346)
T ss_dssp             --CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTC--------CEEEEEEEGGGGCSCSS
T ss_pred             --cccccccccccccCcH----hhHhCHHHHHHhhhcccccccchhhh----cCc--------ccccccccceeeecccc
Confidence              3688999999964321    12234567789999999999888753    222        45888887654321   


Q ss_pred             ---------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCC
Q 024976          163 ---------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  206 (259)
Q Consensus       163 ---------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~  206 (259)
                               ......|+.+|.+.+...+.++..   ..++....+.|+.+.++
T Consensus       142 ~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~---~~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         142 LPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA---DKTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH---CTTCEEEEEEECEEECC
T ss_pred             ccccccccccccCChHHHHHHHHHHHHHHHHHh---ccCCceEEEeecceecc
Confidence                     123446999999999998887664   34688888888877754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=3.6e-16  Score=130.45  Aligned_cols=202  Identities=15%  Similarity=0.045  Sum_probs=138.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++|||||+|.||++++++|+++|. +|+++++..+......     ...++.++++|+++.+++.+.+.+      .+|+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~~------~~d~   70 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------KCDV   70 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH------HCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHHh------CCCc
Confidence            589999999999999999999994 7999887654332221     145799999999987766553321      4899


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------  163 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  163 (259)
                      |||+|+.....    ...++....+++|+.++.++++++...    +         .++++.||...+...         
T Consensus        71 Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~~~~----~---------~~~~~~ss~~~~~~~~~~~~~~~~  133 (342)
T d2blla1          71 VLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY----R---------KRIIFPSTSEVYGMCSDKYFDEDH  133 (342)
T ss_dssp             EEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT----T---------CEEEEECCGGGGBTCCCSSBCTTT
T ss_pred             ccccccccccc----ccccCCccccccccccccccccccccc----c---------cccccccccccccccccccccccc
Confidence            99999964321    122334578899999999999987542    1         346666765543221         


Q ss_pred             ---------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--------hHHHHHHhhhh--
Q 024976          164 ---------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--------PEEIRSKATDY--  224 (259)
Q Consensus       164 ---------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--------~~~~~~~~~~~--  224 (259)
                               .+...|+.||.+.+.+++.+...++    +++..+.|..+..+.......        ...+.......  
T Consensus       134 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~----~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  209 (342)
T d2blla1         134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG----LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP  209 (342)
T ss_dssp             CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCC
T ss_pred             ccccccccCCCcchhhhcccchhhhhhhhhcccC----ceeEEeeccccccccccccccccccccccchHHHHHHHhCCC
Confidence                     2345799999999999999988764    889999888887654322211        11222222111  


Q ss_pred             -------ccCCCCCCHHHHHHHHHHhcCcc
Q 024976          225 -------MAAYKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       225 -------~~~~~~~~~~dva~~~~~l~s~~  247 (259)
                             .....+...+|+++++..++...
T Consensus       210 ~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~  239 (342)
T d2blla1         210 IKLIDGGKQKRCFTDIRDGIEALYRIIENA  239 (342)
T ss_dssp             EEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred             ccccCCCCeeeeecccccccceeeeehhhc
Confidence                   11122678999999999998653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.8e-16  Score=129.69  Aligned_cols=201  Identities=14%  Similarity=0.043  Sum_probs=134.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .|++|||||+|.||++++++|.++|++|+++++............ ....++.+...|+.+.            .+.++|
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~------------~~~~~d   67 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEP------------LYIEVD   67 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTSC------------CCCCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHHH------------HHcCCC
Confidence            378999999999999999999999999999986322111111111 1122455666665432            223699


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----------  161 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  161 (259)
                      +|||+|+......    ..++..+.+++|+.++.++++++...    +         .++|++||...+.          
T Consensus        68 ~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~~----~---------~k~I~~SS~~vy~~~~~~~~~e~  130 (312)
T d2b69a1          68 QIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKRV----G---------ARLLLASTSEVYGDPEVHPQSED  130 (312)
T ss_dssp             EEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHHH----T---------CEEEEEEEGGGGBSCSSSSBCTT
T ss_pred             EEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHHHc----C---------CcEEEEEChheecCCCCCCCCcc
Confidence            9999999643211    11234677889999999999887542    1         4599999865542          


Q ss_pred             ------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC--hHHHHHHhhhhcc-------
Q 024976          162 ------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMA-------  226 (259)
Q Consensus       162 ------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~-------  226 (259)
                            +..+...|+.+|.+.+.+++..+.+++    +++..++|+.+..|.......  -...........+       
T Consensus       131 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g  206 (312)
T d2b69a1         131 YWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG----VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSG  206 (312)
T ss_dssp             CCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSS
T ss_pred             ccCCCCCCCCccHHHHHHHHHHHHHHHHHHHhC----CcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCC
Confidence                  123456799999999999999988764    999999999999776543321  1122222211111       


Q ss_pred             --CCCCCCHHHHHHHHHHhcCc
Q 024976          227 --AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 --~~~~~~~~dva~~~~~l~s~  246 (259)
                        ..-+...+|+++++..++..
T Consensus       207 ~~~r~~i~v~D~~~~~~~~~~~  228 (312)
T d2b69a1         207 SQTRAFQYVSDLVNGLVALMNS  228 (312)
T ss_dssp             CCEEECEEHHHHHHHHHHHHTS
T ss_pred             CeeEccEEHHHHHHHHHHHHhh
Confidence              11256789999999888753

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.65  E-value=3.9e-16  Score=129.24  Aligned_cols=206  Identities=17%  Similarity=0.104  Sum_probs=141.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeE------EEEeCChhhHH-HHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAI------AIMGRRKTVLR-SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~v------v~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++|||||+|.||+++++.|+++|+.|      +.++....... .....+ ....++.++..|+++........      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~------   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLAREL------   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccc------
Confidence            68999999999999999999999754      33432211100 001111 22457999999999998776543      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---  163 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  163 (259)
                       ..+|.++|.|+.....    ...+.....+++|+.++.++++++...    +.        .++|++||...+.+.   
T Consensus        75 -~~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~----~~--------~~~I~~Ss~~~yg~~~~~  137 (322)
T d1r6da_          75 -RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVDA----GV--------GRVVHVSTNQVYGSIDSG  137 (322)
T ss_dssp             -TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHT----TC--------CEEEEEEEGGGGCCCSSS
T ss_pred             -cccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHHHHc----CC--------ceEEEeecceeecCCCCC
Confidence             3789999999853221    233445677889999999999988642    22        569999998765332   


Q ss_pred             --------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc-----CC--
Q 024976          164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-----AY--  228 (259)
Q Consensus       164 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-----~~--  228 (259)
                              .+...|+.+|.+.+.+++.+++++.    +++..++|+.+..|.......-..+........+     .+  
T Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~  213 (322)
T d1r6da_         138 SWTESSPLEPNSPYAASKAGSDLVARAYHRTYG----LDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGAN  213 (322)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCC
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC----CCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCe
Confidence                    2345799999999999999988764    9999999999987654333222222222222111     11  


Q ss_pred             --CCCCHHHHHHHHHHhcCcc
Q 024976          229 --KFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       229 --~~~~~~dva~~~~~l~s~~  247 (259)
                        .+...+|+++++..++...
T Consensus       214 ~r~~i~v~D~a~ai~~~~~~~  234 (322)
T d1r6da_         214 VREWVHTDDHCRGIALVLAGG  234 (322)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHC
T ss_pred             EEccEEHHHHHHHHHHHHhCC
Confidence              2567899999999988653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.7e-16  Score=121.69  Aligned_cols=196  Identities=15%  Similarity=0.110  Sum_probs=132.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++|++|||||||.||++++++|.++|.  +|+++.|+......      .....+....+|+.+.+++...       +
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~-------~   78 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASA-------F   78 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGG-------G
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeeccccccccccc-------c
Confidence            5789999999999999999999999996  79999997543211      1123467777888877665443       3


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  167 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  167 (259)
                      ..+|++||++|..       ..........++|+.++..+++++..    .+.        .++|++|+.......  ..
T Consensus        79 ~~~d~vi~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~a~~----~~v--------~~fi~~Ss~~~~~~~--~~  137 (232)
T d2bkaa1          79 QGHDVGFCCLGTT-------RGKAGAEGFVRVDRDYVLKSAELAKA----GGC--------KHFNLLSSKGADKSS--NF  137 (232)
T ss_dssp             SSCSEEEECCCCC-------HHHHHHHHHHHHHTHHHHHHHHHHHH----TTC--------CEEEEECCTTCCTTC--SS
T ss_pred             ccccccccccccc-------ccccchhhhhhhcccccceeeecccc----cCc--------cccccCCccccccCc--cc
Confidence            4799999999842       12344566778899999998887753    322        569999998765433  45


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecccccCCcccCCCChHHHHHHhhhhcc----CCCCCCHHHHHHHHHH
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA----AYKFGEKWDIAMAALY  242 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi-~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~  242 (259)
                      .|+.+|...+...+        ..|. ++..++||.+..+..... ........+....+    ..+..+.+|+|++++.
T Consensus       138 ~Y~~~K~~~E~~l~--------~~~~~~~~IlRP~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~  208 (232)
T d2bkaa1         138 LYLQVKGEVEAKVE--------ELKFDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLN  208 (232)
T ss_dssp             HHHHHHHHHHHHHH--------TTCCSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHH
T ss_pred             hhHHHHHHhhhccc--------cccccceEEecCceeecCCCcCc-HHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHH
Confidence            69999988775543        2233 577889999986533221 12222232222222    2234667999999888


Q ss_pred             hcCccC
Q 024976          243 LASDAA  248 (259)
Q Consensus       243 l~s~~~  248 (259)
                      ++....
T Consensus       209 ~~~~~~  214 (232)
T d2bkaa1         209 NVVRPR  214 (232)
T ss_dssp             HHTSCC
T ss_pred             HHhcCc
Confidence            775543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.62  E-value=1e-14  Score=123.41  Aligned_cols=175  Identities=17%  Similarity=0.084  Sum_probs=126.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHH-cCCeEEEEeC---------ChhhHHHHHHHHHhc--------CCCeEEEEcCCCCH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGR---------RKTVLRSAVAALHSL--------GIPAIGLEGDVRKR   73 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~-~G~~vv~~~r---------~~~~~~~~~~~~~~~--------~~~v~~~~~Dl~~~   73 (259)
                      +.+||||||+|.||++++++|++ .|++|+++|+         ..+..+.....+...        ...+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45799999999999999999986 6899999874         122233333333221        23578999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEE
Q 024976           74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN  153 (259)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  153 (259)
                      +.++++++..    .++|+|+|.|+.....    ...+.....+++|+.++..+++++...    +.        .++++
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~~~~----~~--------~~~~~  141 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLLH----KC--------DKIIF  141 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHT----TC--------CEEEE
T ss_pred             HHhhhhhhcc----ceeehhhccccccccc----ccccccccccccccccccccchhhhcc----CC--------ccccc
Confidence            9999888653    5799999999964321    122345567889999999998888743    21        34666


Q ss_pred             eccccccc------------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccC
Q 024976          154 ISATLHYT------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  210 (259)
Q Consensus       154 isS~~~~~------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~  210 (259)
                      +++...+.                  +..+...|+.+|.+.+.+++.+...++    +++..++|+.+..+....
T Consensus       142 ~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g----l~~~~lR~~~vyG~~~~~  212 (383)
T d1gy8a_         142 SSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG----IKGICLRYFNACGAHEDG  212 (383)
T ss_dssp             EEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECEEECCCTTS
T ss_pred             ccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhC----CCEEEEecceeeccCccc
Confidence            65554332                  123356799999999999998887664    999999999888665443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=1e-14  Score=114.93  Aligned_cols=203  Identities=13%  Similarity=0.016  Sum_probs=126.7

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCe--EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAA--IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~--vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++||||||+|.||++++++|+++|++  |+.+.|+.+...       ....+++++.+|+++.+++.++++       .+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KIGGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HTTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-------hccCCcEEEEeeeccccccccccc-------cc
Confidence            59999999999999999999999976  455667765432       223468899999999999887764       68


Q ss_pred             cEEEECCCCCCCCC---------CCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 024976           91 DILVNAAAGNFLVP---------AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  161 (259)
Q Consensus        91 d~li~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
                      |.+||+++......         ........+.....+|+.+...+.........            +...+.++.....
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~s~~~~~~  137 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV------------KHIVVVGSMGGTN  137 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTC------------SEEEEEEETTTTC
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccc------------cccccccccccCC
Confidence            99999998543211         11111234556667888888887766554321            5577777766655


Q ss_pred             cCccchhhHHHHHHH-HHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhccCCCCCCHHHHHHHH
Q 024976          162 ATWYQIHVSAAKAAV-DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA  240 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~-~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (259)
                      +......+..++... ..+...+..    ..|+++..++||.+..+................  .....+.+.+|+|+++
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~i~~~Dva~a~  211 (252)
T d2q46a1         138 PDHPLNKLGNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRELLVGKDDELL--QTDTKTVPRADVAEVC  211 (252)
T ss_dssp             TTCGGGGGGGCCHHHHHHHHHHHHH----HSSSCEEEEEECEEECSCTTSSCEEEESTTGGG--GSSCCEEEHHHHHHHH
T ss_pred             CCcccccccccchhhhhhhhhhhhh----cccccceeecceEEECCCcchhhhhhccCcccc--cCCCCeEEHHHHHHHH
Confidence            544333333332222 222222222    457999999999997654221110000000000  1112356789999999


Q ss_pred             HHhcCcc
Q 024976          241 LYLASDA  247 (259)
Q Consensus       241 ~~l~s~~  247 (259)
                      +.++..+
T Consensus       212 ~~~l~~~  218 (252)
T d2q46a1         212 IQALLFE  218 (252)
T ss_dssp             HHHTTCG
T ss_pred             HHHhCCc
Confidence            9988643

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.39  E-value=1.5e-13  Score=106.64  Aligned_cols=189  Identities=15%  Similarity=0.093  Sum_probs=116.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .|++|||||||.||++++++|.++|.  +|+...|+...          ...+   +..+..|..++..      ...+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~---~~~~~~d~~~~~~------~~~~~   62 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPR---LDNPVGPLAELLP------QLDGS   62 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTT---EECCBSCHHHHGG------GCCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hccc---ccccccchhhhhh------ccccc
Confidence            58999999999999999999999997  56666665321          0112   3445555544322      22357


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  169 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  169 (259)
                      +|.+|+++|.....      ...-....+.|+.++..+++++.    +.+.        .+++++||..+...  ....|
T Consensus        63 ~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a~----~~~v--------~~~i~~Ss~~~~~~--~~~~y  122 (212)
T d2a35a1          63 IDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRAL----EMGA--------RHYLVVSALGADAK--SSIFY  122 (212)
T ss_dssp             CSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHHH----HTTC--------CEEEEECCTTCCTT--CSSHH
T ss_pred             hheeeeeeeeeccc------cccccccccchhhhhhhcccccc----cccc--------cccccccccccccc--cccch
Confidence            99999999853211      11234677889999888888764    3332        66999998766543  34568


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecccccCCcccCCCChHHHHHHhhhhccC-CCCCCHHHHHHHHHHhcCcc
Q 024976          170 SAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDA  247 (259)
Q Consensus       170 ~~sK~a~~~l~~~la~e~~~~~gi-~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~  247 (259)
                      ..+|...+...+        ..+. +...++|+.+..+...... .......+....+. .+....+|+|+++..++.++
T Consensus       123 ~~~K~~~E~~l~--------~~~~~~~~I~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         123 NRVKGELEQALQ--------EQGWPQLTIARPSLLFGPREEFRL-AEILAAPIARILPGKYHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             HHHHHHHHHHHT--------TSCCSEEEEEECCSEESTTSCEEG-GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             hHHHHHHhhhcc--------ccccccceeeCCcceeCCcccccH-HHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence            999977765443        2333 5788899999754321111 11111111000110 12356789999999988654


Q ss_pred             C
Q 024976          248 A  248 (259)
Q Consensus       248 ~  248 (259)
                      .
T Consensus       194 ~  194 (212)
T d2a35a1         194 G  194 (212)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.37  E-value=2.8e-12  Score=103.22  Aligned_cols=180  Identities=14%  Similarity=0.141  Sum_probs=118.8

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      .++|||||+|.||++++++|.++|++|+.++|+.                     +|++|.++++++++..     ++|+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~d~   55 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK-----KPNV   55 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc-----CCCE
Confidence            4699999999999999999999999999998753                     4899999999988764     6899


Q ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-----------c
Q 024976           93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----------T  161 (259)
Q Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~  161 (259)
                      |||+++.....    .........+..|+.....+.......    .         ..+++.||...+           .
T Consensus        56 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~~----~---------~~~~~~ss~~v~~~~~~~~~~e~~  118 (281)
T d1vl0a_          56 VINCAAHTAVD----KCEEQYDLAYKINAIGPKNLAAAAYSV----G---------AEIVQISTDYVFDGEAKEPITEFD  118 (281)
T ss_dssp             EEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHH----T---------CEEEEEEEGGGSCSCCSSCBCTTS
T ss_pred             EEeeccccccc----cccccchhhcccccccccccccccccc----c---------ccccccccceeeeccccccccccc
Confidence            99999853211    122233566677777776666655432    1         335555554332           1


Q ss_pred             cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCChHHHHHHhhhhcc-------CCCCCCHH
Q 024976          162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKW  234 (259)
Q Consensus       162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  234 (259)
                      +..+...|+.+|...+.+.+    +.    +.+...+.|+.+..+..  .. ............+       ...+...+
T Consensus       119 ~~~~~~~~~~~k~~~e~~~~----~~----~~~~~i~R~~~vyG~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~  187 (281)
T d1vl0a_         119 EVNPQSAYGKTKLEGENFVK----AL----NPKYYIVRTAWLYGDGN--NF-VKTMINLGKTHDELKVVHDQVGTPTSTV  187 (281)
T ss_dssp             CCCCCSHHHHHHHHHHHHHH----HH----CSSEEEEEECSEESSSS--CH-HHHHHHHHHHCSEEEEESSCEECCEEHH
T ss_pred             cccchhhhhhhhhHHHHHHH----Hh----CCCccccceeEEeCCCc--cc-ccchhhhhccCCceeecCCceeccchhh
Confidence            22345568888877765543    22    36778899999975532  11 1122222211111       12356789


Q ss_pred             HHHHHHHHhcCc
Q 024976          235 DIAMAALYLASD  246 (259)
Q Consensus       235 dva~~~~~l~s~  246 (259)
                      |+++++.+++..
T Consensus       188 D~~~~~~~~~~~  199 (281)
T d1vl0a_         188 DLARVVLKVIDE  199 (281)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhh
Confidence            999999988754

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.33  E-value=1.3e-11  Score=99.86  Aligned_cols=194  Identities=14%  Similarity=0.045  Sum_probs=114.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH--HHHHHH-hcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~--~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .|++|||||+|.||++++++|.++|++|++++|+......  ....+. .....+.++.+|+.+.....+.++       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence            5789999999999999999999999999999987543211  111121 123458899999999998777765       


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH  168 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  168 (259)
                      ..+.++++++..                   +..+...+.+++...    ..        .++++.||............
T Consensus        76 ~~~~vi~~~~~~-------------------~~~~~~~~~~a~~~~----~~--------~~~~~~s~~~~~~~~~~~~~  124 (307)
T d1qyca_          76 NVDVVISTVGSL-------------------QIESQVNIIKAIKEV----GT--------VKRFFPSEFGNDVDNVHAVE  124 (307)
T ss_dssp             TCSEEEECCCGG-------------------GSGGGHHHHHHHHHH----CC--------CSEEECSCCSSCTTSCCCCT
T ss_pred             hceeeeeccccc-------------------ccchhhHHHHHHHHh----cc--------ccceeeeccccccccccccc
Confidence            578999988742                   223333444444322    21        34677777554433333333


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCC------ChHHHHHHhhhhccCCCCCCHHHHHHHHHH
Q 024976          169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIAMAALY  242 (259)
Q Consensus       169 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (259)
                      +...+............+    .|++...++|+.+..+......      .................+...+|+|++++.
T Consensus       125 ~~~~~~~~~~~~~~~~~~----~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  200 (307)
T d1qyca_         125 PAKSVFEVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIK  200 (307)
T ss_dssp             THHHHHHHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHT
T ss_pred             cccccccccccccchhhc----cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHH
Confidence            333333333333333333    3577888899887633211100      000000001111112236789999999999


Q ss_pred             hcCcc
Q 024976          243 LASDA  247 (259)
Q Consensus       243 l~s~~  247 (259)
                      ++...
T Consensus       201 ~l~~~  205 (307)
T d1qyca_         201 AVDDP  205 (307)
T ss_dssp             TSSCG
T ss_pred             HhcCh
Confidence            98654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.25  E-value=3.9e-11  Score=97.51  Aligned_cols=194  Identities=14%  Similarity=0.043  Sum_probs=111.8

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhH--HHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL--RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~--~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .++||||||+|.||++++++|.++|++|+++.|+....  ............++.++.+|++|.+.+.+.+.       .
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            45699999999999999999999999999999874321  11111111123468899999999999877764       6


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----Cc
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----TW  164 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~  164 (259)
                      .+.++++++....               ..|..+...++.++.    +...        .++++.||......     ..
T Consensus        76 ~~~~~~~~~~~~~---------------~~~~~~~~~~l~~a~----~~~~--------~~~v~~Ss~g~~~~~~~~~~~  128 (312)
T d1qyda_          76 VDVVISALAGGVL---------------SHHILEQLKLVEAIK----EAGN--------IKRFLPSEFGMDPDIMEHALQ  128 (312)
T ss_dssp             CSEEEECCCCSSS---------------STTTTTHHHHHHHHH----HSCC--------CSEEECSCCSSCTTSCCCCCS
T ss_pred             cchhhhhhhhccc---------------ccchhhhhHHHHHHH----HhcC--------CcEEEEeeccccCCCcccccc
Confidence            7888888874321               123444444444443    2222        44666776543321     12


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCC-------CChHHHHHHhhhhccCCCCCCHHHHH
Q 024976          165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-------LAPEEIRSKATDYMAAYKFGEKWDIA  237 (259)
Q Consensus       165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~dva  237 (259)
                      +...|..+|...+    ....    ..|+....++|+.+..+.....       .........+.......-+...+|+|
T Consensus       129 ~~~~~~~~~~~~~----~~~~----~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  200 (312)
T d1qyda_         129 PGSITFIDKRKVR----RAIE----AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVG  200 (312)
T ss_dssp             STTHHHHHHHHHH----HHHH----HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHH
T ss_pred             hhhhhhHHHHHHH----Hhhc----ccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHH
Confidence            2233444444333    2222    3457788888887753211000       00000000001111112267889999


Q ss_pred             HHHHHhcCcc
Q 024976          238 MAALYLASDA  247 (259)
Q Consensus       238 ~~~~~l~s~~  247 (259)
                      ++++.++...
T Consensus       201 ~a~~~~l~~~  210 (312)
T d1qyda_         201 TYTIKSIDDP  210 (312)
T ss_dssp             HHHHHHTTCG
T ss_pred             HHHHHHhcCc
Confidence            9999888553

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.19  E-value=7.8e-16  Score=118.37  Aligned_cols=46  Identities=24%  Similarity=0.394  Sum_probs=42.1

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL   59 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~   59 (259)
                      ++.|+||+|++|+++|+.|++.|++|++.+|++++++.+.+++...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            5788899999999999999999999999999999999998888654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.18  E-value=1.6e-11  Score=99.21  Aligned_cols=128  Identities=17%  Similarity=0.200  Sum_probs=91.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      ++|||||+|.||++++++|.++|. ++.++++...                 +.+|++|.+.++++++..     ++|+|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~V   58 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDVI   58 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCEE
Confidence            599999999999999999999985 5555554321                 357999999999998765     69999


Q ss_pred             EECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------
Q 024976           94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------  162 (259)
Q Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  162 (259)
                      ||+||......    ..+.-...++.|+.+...+.+++..    .         +.+++++||...+.+           
T Consensus        59 ih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~---------~~~~~~~ss~~~~~~~~~~~~~E~~~  121 (298)
T d1n2sa_          59 VNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAANE----T---------GAWVVHYSTDYVFPGTGDIPWQETDA  121 (298)
T ss_dssp             EECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHTT----T---------TCEEEEEEEGGGSCCCTTCCBCTTSC
T ss_pred             EEecccccccc----cccCccccccccccccccchhhhhc----c---------ccccccccccccccCCCCCCCccccc
Confidence            99999643211    1123356778899998888877642    2         256777777654322           


Q ss_pred             CccchhhHHHHHHHHHHHH
Q 024976          163 TWYQIHVSAAKAAVDSITR  181 (259)
Q Consensus       163 ~~~~~~Y~~sK~a~~~l~~  181 (259)
                      ..+...|+.+|.+.+.+.+
T Consensus       122 ~~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_         122 TSPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             CCCSSHHHHHHHHHHHHHH
T ss_pred             cCCCchHhhhhhhhhhhHH
Confidence            1234579999988776554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.15  E-value=4.3e-10  Score=93.27  Aligned_cols=148  Identities=11%  Similarity=0.031  Sum_probs=94.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHH-HHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~-~~~~~~~~~~~~g~   89 (259)
                      +.|+++||||+|.||++++++|.++|++|+++.|+......  +.+. ....+.++++|+.|..+ ++.+       +..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~~~~v~~~~gD~~d~~~~~~~a-------~~~   71 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-AIPNVTLFQGPLLNNVPLMDTL-------FEG   71 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-TSTTEEEEESCCTTCHHHHHHH-------HTT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-ccCCCEEEEeeCCCcHHHHHHH-------hcC
Confidence            47999999999999999999999999999999998665332  2222 23468999999998654 3333       346


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--ccch
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQI  167 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~  167 (259)
                      .|.++.+......                .++....+++.++.    +.+.        .++++.||.......  ....
T Consensus        72 ~~~~~~~~~~~~~----------------~~~~~~~~~~~aa~----~agv--------~~~v~~Ss~~~~~~~~~~~~~  123 (350)
T d1xgka_          72 AHLAFINTTSQAG----------------DEIAIGKDLADAAK----RAGT--------IQHYIYSSMPDHSLYGPWPAV  123 (350)
T ss_dssp             CSEEEECCCSTTS----------------CHHHHHHHHHHHHH----HHSC--------CSEEEEEECCCGGGTSSCCCC
T ss_pred             CceEEeecccccc----------------hhhhhhhHHHHHHH----HhCC--------CceEEEeeccccccCCcccch
Confidence            8888777542111                12222333444443    2222        347777776544332  2334


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeccccc
Q 024976          168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  204 (259)
Q Consensus       168 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~  204 (259)
                      .|..+|...+.+.+        ..++....+.|+...
T Consensus       124 ~~~~~k~~~~~~~~--------~~~~~~~~vr~~~~~  152 (350)
T d1xgka_         124 PMWAPKFTVENYVR--------QLGLPSTFVYAGIYN  152 (350)
T ss_dssp             TTTHHHHHHHHHHH--------TSSSCEEEEEECEEG
T ss_pred             hhhhhHHHHHHHHH--------hhccCceeeeeceee
Confidence            56677766554433        345777888888765

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.11  E-value=1.2e-10  Score=94.38  Aligned_cols=198  Identities=16%  Similarity=0.114  Sum_probs=116.5

Q ss_pred             EEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH--HcCCcc
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--HFGKLD   91 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~--~~g~id   91 (259)
                      ||||||+|.||++++++|+++|. .|+++++-.... +.. .+.+      ...+|..+.+..   ......  .+..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~-~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFV-NLVD------LNIADYMDKEDF---LIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGH-HHHT------SCCSEEEEHHHH---HHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhh-cccc------cchhhhccchHH---HHHHhhhhcccchh
Confidence            79999999999999999999997 588876432211 111 1111      112233333332   222222  345788


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---------
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------  162 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  162 (259)
                      +++|.|+.....   ..   ..+...+.|+.+...+.+++...    .         .++++.||.....+         
T Consensus        71 ~i~~~aa~~~~~---~~---~~~~~~~~~~~~~~~~l~~~~~~----~---------i~~v~~ss~~~~~~~~~~~~~~~  131 (307)
T d1eq2a_          71 AIFHEGACSSTT---EW---DGKYMMDNNYQYSKELLHYCLER----E---------IPFLYASSAATYGGRTSDFIESR  131 (307)
T ss_dssp             EEEECCSCCCTT---CC---CHHHHHHHTHHHHHHHHHHHHHH----T---------CCEEEEEEGGGGTTCCSCBCSSG
T ss_pred             hhhhhccccccc---cc---ccccccccccccccccccccccc----c---------ccccccccccccccccccccccc
Confidence            999999843221   12   23455677788887777766543    1         22555555444322         


Q ss_pred             --CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecccccCCcccCCCC----hHHHHHHhhh----------hcc
Q 024976          163 --TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATD----------YMA  226 (259)
Q Consensus       163 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~pg~v~t~~~~~~~~----~~~~~~~~~~----------~~~  226 (259)
                        ..+...|+.+|.+.+.+++.+..++    ++.+..++|..+..|.......    .......+..          ...
T Consensus       132 ~~~~~~~~Y~~~K~~~e~~~~~~~~~~----~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  207 (307)
T d1eq2a_         132 EYEKPLNVYGYSKFLFDEYVRQILPEA----NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENF  207 (307)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHHHHGGGC----SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------
T ss_pred             cccccccccccccchhhhhcccccccc----ccccccccceeEeeccccccccccccccccccccccccceeeecCccce
Confidence              2345679999999999988876544    5888999998887664332211    1111111111          111


Q ss_pred             CCCCCCHHHHHHHHHHhcCc
Q 024976          227 AYKFGEKWDIAMAALYLASD  246 (259)
Q Consensus       227 ~~~~~~~~dva~~~~~l~s~  246 (259)
                      ...+...+|++.++..++..
T Consensus       208 ~r~~~~v~d~~~~~~~~~~~  227 (307)
T d1eq2a_         208 KRDFVYVGDVADVNLWFLEN  227 (307)
T ss_dssp             CBCEEEHHHHHHHHHHHHHH
T ss_pred             eeeeeecccHHHHHHHHhhh
Confidence            12356688999998877643

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.24  E-value=7.6e-06  Score=60.74  Aligned_cols=84  Identities=23%  Similarity=0.284  Sum_probs=64.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHH---HHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVA---ALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~---~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      .++++|+++|.|+ ||.|++++..|.+.|.+ ++++.|+.+..++...   .+.... .......|+.+.+++.....  
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhhc--
Confidence            3688999999998 59999999999999994 8899998776665444   333322 24456788999887766553  


Q ss_pred             HHHcCCccEEEECCCCC
Q 024976           84 INHFGKLDILVNAAAGN  100 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~  100 (259)
                           ..|++||+....
T Consensus        90 -----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 -----SADILTNGTKVG  101 (182)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----ccceeccccCCc
Confidence                 689999998753

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.12  E-value=1.1e-05  Score=58.35  Aligned_cols=73  Identities=21%  Similarity=0.311  Sum_probs=56.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++++++|.|+ |++|+.++++|...|+ ++.++.|+.++.+.+.+++.     ....     +.+++.+.+       
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-----~~~~-----~~~~~~~~l-------   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-----GEAV-----RFDELVDHL-------   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-----CEEC-----CGGGHHHHH-------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-----cccc-----cchhHHHHh-------
Confidence            688999999998 9999999999999998 58899999888888877763     1221     233333333       


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ...|++|++.+.
T Consensus        83 ~~~Divi~atss   94 (159)
T d1gpja2          83 ARSDVVVSATAA   94 (159)
T ss_dssp             HTCSEEEECCSS
T ss_pred             ccCCEEEEecCC
Confidence            269999999884

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.12  E-value=8.8e-06  Score=60.35  Aligned_cols=79  Identities=14%  Similarity=0.167  Sum_probs=55.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +|.+++|+||+|++|...+......|++|+.+.+++++.+.    ++..+....+..-|-...+.+.+..     ..+++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~----~~~~Ga~~vi~~~~~~~~~~~~~~~-----~~~Gv   99 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----LKQIGFDAAFNYKTVNSLEEALKKA-----SPDGY   99 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCSEEEETTSCSCHHHHHHHH-----CTTCE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH----HHhhhhhhhcccccccHHHHHHHHh-----hcCCC
Confidence            58999999999999999999999999999999988765433    3344554444433333333332221     12369


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |+++.+.|
T Consensus       100 d~v~D~vG  107 (182)
T d1v3va2         100 DCYFDNVG  107 (182)
T ss_dssp             EEEEESSC
T ss_pred             ceeEEecC
Confidence            99999998

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.09  E-value=8.3e-06  Score=59.93  Aligned_cols=75  Identities=16%  Similarity=0.134  Sum_probs=57.6

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .|+++|.|| |.+|+.+|+.|+++|++|++++|+.++.+.+.+.+    ........+..+.......+.       ..|
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i~-------~~~   69 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KHD   69 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhhh-------ccc
Confidence            689999987 89999999999999999999999998877665543    345556667777666666553       467


Q ss_pred             EEEECCC
Q 024976           92 ILVNAAA   98 (259)
Q Consensus        92 ~li~~ag   98 (259)
                      .++....
T Consensus        70 ~~i~~~~   76 (182)
T d1e5qa1          70 LVISLIP   76 (182)
T ss_dssp             EEEECSC
T ss_pred             eeEeecc
Confidence            7776544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=9.6e-06  Score=59.66  Aligned_cols=77  Identities=16%  Similarity=0.176  Sum_probs=54.0

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--G   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~--g   88 (259)
                      +|.+++|+||+|++|...+......|++|+.+.+++++.+..    ++.|..-.   .|.++.+-.++    +++..  .
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~~Ga~~v---i~~~~~~~~~~----i~~~t~~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHEV---FNHREVNYIDK----IKKYVGEK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE---EETTSTTHHHH----HHHHHCTT
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cccCcccc---cccccccHHHH----hhhhhccC
Confidence            688999999999999999999999999999988876654333    23344322   25555433333    33332  2


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      .+|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            5999999877

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.03  E-value=6.5e-06  Score=61.52  Aligned_cols=87  Identities=21%  Similarity=0.203  Sum_probs=58.9

Q ss_pred             CCcEEEE-eCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH-cC
Q 024976           11 KGKVALL-TGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FG   88 (259)
Q Consensus        11 ~~k~~lI-tGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~-~g   88 (259)
                      .|.+++| +||+|++|...+......|++|+.+.|+.+..++..+.+++.|....+..-+ .+..+..+.++++.+. .+
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQ-NNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHH-HHCGGGHHHHHHHHHHHTC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccc-cchhHHHHHHHHHHhhccC
Confidence            4555555 6999999999999888899999998888777777777777767654433211 1112233333444333 34


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      ++|+++.+.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999987

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.02  E-value=1.3e-05  Score=58.64  Aligned_cols=83  Identities=19%  Similarity=0.260  Sum_probs=56.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC-
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g-   88 (259)
                      -.|.+++|+| +|++|...+..+...|++|+++++++++++...+    .+....+. .|-. .++.....+++.+..| 
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga~~~~~-~~~~-~~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADVTLV-VDPA-KEEESSIIERIRSAIGD   97 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEEE-CCTT-TSCHHHHHHHHHHHSSS
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCCcEEEe-cccc-ccccchhhhhhhccccc
Confidence            3578999997 6899999999999999999999999887654433    34433332 2222 2233344445555544 


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      .+|++|.++|.
T Consensus        98 g~D~vid~~g~  108 (170)
T d1e3ja2          98 LPNVTIDCSGN  108 (170)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCceeeecCCC
Confidence            69999999993

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.99  E-value=1.4e-05  Score=55.98  Aligned_cols=73  Identities=18%  Similarity=0.354  Sum_probs=58.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      +++|.|+ |.+|+.+++.|.++|++|++++.+++..+.+.+++     .+.++..|.++++.++++-      ....|.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~------i~~a~~v   69 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG------IEDADMY   69 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT------TTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC------hhhhhhh
Confidence            6889997 89999999999999999999999988777655442     3678999999999877651      1357888


Q ss_pred             EECCC
Q 024976           94 VNAAA   98 (259)
Q Consensus        94 i~~ag   98 (259)
                      +....
T Consensus        70 v~~t~   74 (132)
T d1lssa_          70 IAVTG   74 (132)
T ss_dssp             EECCS
T ss_pred             cccCC
Confidence            87544

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.93  E-value=2.8e-05  Score=56.86  Aligned_cols=77  Identities=21%  Similarity=0.244  Sum_probs=58.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..++||.++|.|+ ||.+++++..|.+.|.+|.++.|+.++.+.+.+.+...+ .+..+  +..+.            ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~------------~~   77 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDEL------------EG   77 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG------------TT
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-ccccc--ccccc------------cc
Confidence            3578999999997 689999999999999999999999999888888776543 23332  22211            11


Q ss_pred             CCccEEEECCCCC
Q 024976           88 GKLDILVNAAAGN  100 (259)
Q Consensus        88 g~id~li~~ag~~  100 (259)
                      ...|++||+....
T Consensus        78 ~~~dliIN~Tp~G   90 (170)
T d1nyta1          78 HEFDLIINATSSG   90 (170)
T ss_dssp             CCCSEEEECCSCG
T ss_pred             cccceeecccccC
Confidence            3689999998643

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.88  E-value=3e-05  Score=57.01  Aligned_cols=79  Identities=15%  Similarity=0.153  Sum_probs=52.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -+|.++||+||+||+|...+......|++|+.+.+++++.+...    +.+.+..+..   .+ . ..+....+  .-++
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~lGa~~vi~~---~~-~-~~~~~~~~--~~~g   98 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKEVLAR---ED-V-MAERIRPL--DKQR   98 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSEEEEC---C-----------C--CSCC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hcccceeeec---ch-h-HHHHHHHh--hccC
Confidence            35789999999999999999998899999999998877654433    3354443322   11 1 11221111  1247


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|+++.+.|.
T Consensus        99 vD~vid~vgg  108 (176)
T d1xa0a2          99 WAAAVDPVGG  108 (176)
T ss_dssp             EEEEEECSTT
T ss_pred             cCEEEEcCCc
Confidence            9999999994

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=1.4e-05  Score=58.87  Aligned_cols=80  Identities=15%  Similarity=0.096  Sum_probs=56.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|++++|+||+|++|...+......|++|+.+++++++.+... ++   |.+. +  .|-++++-.+++.+ +. .-..+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l---Ga~~-v--i~~~~~d~~~~v~~-~t-~g~g~   98 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAWQ-V--INYREEDLVERLKE-IT-GGKKV   98 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSE-E--EETTTSCHHHHHHH-HT-TTCCE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc---CCeE-E--EECCCCCHHHHHHH-Hh-CCCCe
Confidence            5889999999999999999999999999999999988765543 33   4332 2  35555433333222 21 11369


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |+++.+.|.
T Consensus        99 d~v~d~~g~  107 (179)
T d1qora2          99 RVVYDSVGR  107 (179)
T ss_dssp             EEEEECSCG
T ss_pred             EEEEeCccH
Confidence            999999983

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.85  E-value=3e-05  Score=57.23  Aligned_cols=77  Identities=21%  Similarity=0.299  Sum_probs=54.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--G   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~--g   88 (259)
                      +|++++|+||+|++|...+..+...|++|+++.++.++.+    .+++.+....+   |-.+++-    .+++++..  .
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~----~l~~~Ga~~vi---~~~~~~~----~~~v~~~t~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLSRLGVEYVG---DSRSVDF----ADEILELTDGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHTTCCSEEE---ETTCSTH----HHHHHHHTTTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc----ccccccccccc---cCCccCH----HHHHHHHhCCC
Confidence            4789999999999999999999889999999988766543    33344554322   3344332    23333333  3


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      ++|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999998

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.83  E-value=7.4e-05  Score=54.61  Aligned_cols=78  Identities=15%  Similarity=0.214  Sum_probs=59.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ..+++|+++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+.+.+.+.... ++..+..|-.              ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~~   77 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------PL   77 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------CC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------cc
Confidence            3578999999987 588999999999988889999999999999988886543 3444444321              12


Q ss_pred             CCccEEEECCCCCC
Q 024976           88 GKLDILVNAAAGNF  101 (259)
Q Consensus        88 g~id~li~~ag~~~  101 (259)
                      ...|++||+.....
T Consensus        78 ~~~diiIN~tp~g~   91 (171)
T d1p77a1          78 QTYDLVINATSAGL   91 (171)
T ss_dssp             SCCSEEEECCCC--
T ss_pred             cccceeeecccccc
Confidence            47899999988543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.83  E-value=0.00045  Score=48.83  Aligned_cols=114  Identities=14%  Similarity=0.207  Sum_probs=70.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChhhHHHHHHHHHhc---CCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +++++.|+|+ |.+|..++..|+.+|  .+|+++|+++++.+....++...   .....+...|.   +           
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-----------   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-----------   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------
Confidence            4668999996 899999999999998  37999999988777666666542   22344454443   1           


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 024976           86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA  156 (259)
Q Consensus        86 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS  156 (259)
                      ....-|++|.++|....      +.++-...+..|+    .+.+...+.+.+...       .+.++++|.
T Consensus        69 ~~~~adivvitag~~~~------~g~~r~~l~~~N~----~i~~~~~~~i~~~~p-------~aivivvtN  122 (146)
T d1ez4a1          69 DCKDADLVVITAGAPQK------PGESRLDLVNKNL----NILSSIVKPVVDSGF-------DGIFLVAAN  122 (146)
T ss_dssp             GGTTCSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTC-------CSEEEECSS
T ss_pred             HhccccEEEEecccccC------CCCCHHHHHHHHH----HHHHHHHHHHhhcCC-------CcEEEEeCC
Confidence            22368999999995322      1122233444443    455666666665542       255555554

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.80  E-value=0.00032  Score=49.79  Aligned_cols=118  Identities=13%  Similarity=0.166  Sum_probs=74.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      +-.++++.|+|+ |.+|..++..|+.+|.  +++++|++++.++....++...    ...+.+...|..           
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~-----------   70 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD-----------   70 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG-----------
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH-----------
Confidence            345778999997 8999999999999885  6999999988877776667543    223444433321           


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                         .+..-|++|.++|......   .+.   .+.+..|    ....+-+.+.+.+...       .+.++++|...
T Consensus        71 ---~l~daDvvvitag~~~~~~---~~R---~dl~~~N----~~i~~~i~~~i~~~~p-------~a~~ivvtNPv  126 (148)
T d1ldna1          71 ---DCRDADLVVICAGANQKPG---ETR---LDLVDKN----IAIFRSIVESVMASGF-------QGLFLVATNPV  126 (148)
T ss_dssp             ---GTTTCSEEEECCSCCCCTT---TCS---GGGHHHH----HHHHHHHHHHHHHHTC-------CSEEEECSSSH
T ss_pred             ---HhccceeEEEecccccccC---cch---hHHHHHH----HHHHHHHHHHHHhhCC-------CceEEEecCcc
Confidence               2235799999999643211   111   2223333    3455566666655432       26677666543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.79  E-value=5.4e-05  Score=55.89  Aligned_cols=81  Identities=16%  Similarity=0.258  Sum_probs=54.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~-   87 (259)
                      -.|.+++|+|+ |+||...+..+...|+ +|+++++++++++.. ++   .|.... +...=.+..+   ..+++.+.. 
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~~v-i~~~~~~~~~---~~~~i~~~~~   97 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EE---IGADLT-LNRRETSVEE---RRKAIMDITH   97 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HH---TTCSEE-EETTTSCHHH---HHHHHHHHTT
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc-cc---ccceEE-EeccccchHH---HHHHHHHhhC
Confidence            36899999987 7999999999999998 699999998876543 33   344332 2222222222   233334433 


Q ss_pred             -CCccEEEECCCC
Q 024976           88 -GKLDILVNAAAG   99 (259)
Q Consensus        88 -g~id~li~~ag~   99 (259)
                       .++|++|.+.|.
T Consensus        98 ~~g~Dvvid~vG~  110 (182)
T d1vj0a2          98 GRGADFILEATGD  110 (182)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCceEEeecCCc
Confidence             259999999984

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=2.4e-05  Score=49.02  Aligned_cols=43  Identities=19%  Similarity=0.254  Sum_probs=37.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      -++.+++|+||+||+|......+...|++|+.+.+++++.+..
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3678999999999999999998888999999998887765544

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.74  E-value=0.0001  Score=53.80  Aligned_cols=75  Identities=16%  Similarity=0.238  Sum_probs=52.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -+|++++|+||+|++|...+..+...|++|+.+++++++.+...    +.|.+..+   |..+.      .++.. ...+
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~----~lGa~~~i---~~~~~------~~~~~-~~~g   91 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAEEAA---TYAEV------PERAK-AWGG   91 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCSEEE---EGGGH------HHHHH-HTTS
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc----ccccceee---ehhhh------hhhhh-cccc
Confidence            36889999999999999999988889999999988877655433    33443322   32221      11222 2357


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|+++.+.|
T Consensus        92 ~D~v~d~~G  100 (171)
T d1iz0a2          92 LDLVLEVRG  100 (171)
T ss_dssp             EEEEEECSC
T ss_pred             ccccccccc
Confidence            999999876

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.70  E-value=0.00033  Score=50.29  Aligned_cols=121  Identities=12%  Similarity=0.161  Sum_probs=75.8

Q ss_pred             CCCCCCCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHH
Q 024976            5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVR   78 (259)
Q Consensus         5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~   78 (259)
                      .+...++..++.|+|+ |.+|..++..|+.+|.  +++++|++.+.++....++...    +........|..       
T Consensus        12 ~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~-------   83 (159)
T d2ldxa1          12 VPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN-------   83 (159)
T ss_dssp             SSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG-------
T ss_pred             cccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh-------
Confidence            3445566678889996 8999999999999986  6999999988877777777643    222222333322       


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                             ....-|++|..+|......   .+..   ..++.    .....+.+.+.+.+...       .+.++++|..
T Consensus        84 -------~~~~adivvitag~~~~~~---~~R~---dll~~----N~~i~~~i~~~i~~~~p-------~~ivivvtNP  138 (159)
T d2ldxa1          84 -------VSANSKLVIITAGARMVSG---QTRL---DLLQR----NVAIMKAIVPGVIQNSP-------DCKIIVVTNP  138 (159)
T ss_dssp             -------GGTTEEEEEECCSCCCCTT---TCSS---CTTHH----HHHHHHHHTTTHHHHST-------TCEEEECSSS
T ss_pred             -------hhccccEEEEecccccCCC---CCHH---HHHHH----HHHHHHHHHHHHhccCC-------CeEEEEeCCc
Confidence                   2246899999999643221   1111   12222    33445666666665432       3667767664

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=8.3e-05  Score=56.70  Aligned_cols=81  Identities=16%  Similarity=0.201  Sum_probs=56.3

Q ss_pred             CCCCCcEEEEeCC----------------ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCC
Q 024976            8 DILKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR   71 (259)
Q Consensus         8 ~~l~~k~~lItGa----------------~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   71 (259)
                      .+|+|+++|||+|                ||-.|.++|+.+..+|++|.++......         .....+..+.  +.
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~~--~~   70 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRVD--VM   70 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEEE--CC
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccce--eh
Confidence            5799999999976                4789999999999999999887554321         1122344443  34


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 024976           72 KREDAVRVVESTINHFGKLDILVNAAAGNFL  102 (259)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  102 (259)
                      +.++..+.   +.+.+...|++|++|++...
T Consensus        71 t~~~m~~~---~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          71 TALEMEAA---VNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             SHHHHHHH---HHHHGGGCSEEEECCBCCSE
T ss_pred             hhHHHHHH---HHhhhccceeEeeeechhhh
Confidence            44444444   34444578999999997654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.61  E-value=0.0014  Score=46.82  Aligned_cols=119  Identities=14%  Similarity=0.129  Sum_probs=77.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ..+.++++.|+|+ |.+|..++..|+.+|.  +++++|.+++..+....++...    +........|..   +      
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~---~------   85 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS---V------   85 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG---G------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh---h------
Confidence            4567789999996 8999999999999986  6999999988877767667542    222222223322   2      


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        82 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                           ...-|++|..||.....   ..+.   ...++.|    ..+++-+.+.+.+...       .+-++++|...
T Consensus        86 -----~~~adiVVitAg~~~~~---g~tR---~~l~~~N----~~i~~~i~~~i~~~~p-------~aiiivvtNPv  140 (160)
T d1i0za1          86 -----TANSKIVVVTAGVRQQE---GESR---LNLVQRN----VNVFKFIIPQIVKYSP-------DCIIIVVSNPV  140 (160)
T ss_dssp             -----GTTCSEEEECCSCCCCT---TCCG---GGGHHHH----HHHHHHHHHHHHHHCT-------TCEEEECSSSH
T ss_pred             -----cccccEEEEecCCcccc---Ccch---HHHHHHH----HHHHHHHHHHHHhcCC-------CcEEEEeCCch
Confidence                 23589999999964321   1222   2333333    4466777777776542       26677666653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=0.00044  Score=50.15  Aligned_cols=79  Identities=23%  Similarity=0.326  Sum_probs=55.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC-
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g-   88 (259)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.. +++   |.+. ++..+-.+..+..+.++   ..+| 
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~---Ga~~-~~~~~~~~~~~~~~~~~---~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI---GADL-VLQISKESPQEIARKVE---GQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCSE-EEECSSCCHHHHHHHHH---HHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh---CCcc-ccccccccccccccccc---ccCCC
Confidence            5779999986 8999999999999999 699999998876643 333   4332 33333344444444433   3344 


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      .+|++|.+.|
T Consensus        97 g~Dvvid~~G  106 (171)
T d1pl8a2          97 KPEVTIECTG  106 (171)
T ss_dssp             CCSEEEECSC
T ss_pred             CceEEEeccC
Confidence            7999999999

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.55  E-value=3.3e-05  Score=54.02  Aligned_cols=73  Identities=11%  Similarity=0.158  Sum_probs=55.8

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |.++|.|+ |-+|+.+++.|.+.|++|++++.+++..+.+.    ..+  ...+.+|.++++.+.++-      ....|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~--~~~~~gd~~~~~~l~~a~------i~~a~~   67 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSLG------IRNFEY   67 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTC--SEEEECCTTCTTHHHHHT------GGGCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhC--CcceeeecccchhhhccC------CccccE
Confidence            56888876 68999999999999999999999988766543    222  456778999988776651      125788


Q ss_pred             EEECCC
Q 024976           93 LVNAAA   98 (259)
Q Consensus        93 li~~ag   98 (259)
                      +|...+
T Consensus        68 vi~~~~   73 (134)
T d2hmva1          68 VIVAIG   73 (134)
T ss_dssp             EEECCC
T ss_pred             EEEEcC
Confidence            877766

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=9.1e-05  Score=54.89  Aligned_cols=78  Identities=10%  Similarity=0.112  Sum_probs=50.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEE-EEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIA-IMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv-~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +++|||+||+||+|...++.....|++++ .+.++.++...+.+++   +.+..+   |..+++ +.+.++++..  ..+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~vi---~~~~~~-~~~~~~~~~~--~Gv  101 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAAV---NYKTGN-VAEQLREACP--GGV  101 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEEE---ETTSSC-HHHHHHHHCT--TCE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEEe---eccchh-HHHHHHHHhc--cCc
Confidence            48999999999999999998888999754 4566655555544443   333222   334332 2333333321  369


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |+++.+.|
T Consensus       102 Dvv~D~vG  109 (187)
T d1vj1a2         102 DVYFDNVG  109 (187)
T ss_dssp             EEEEESSC
T ss_pred             eEEEecCC
Confidence            99999998

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.51  E-value=0.00011  Score=53.47  Aligned_cols=79  Identities=15%  Similarity=0.190  Sum_probs=53.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .+.+++|+|++|++|..++..+...|. +|+++++++++++...+    .|... ++  |-++.+..++..+..  .-+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~----~Ga~~-~i--~~~~~~~~~~~~~~~--~~~~   97 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGADY-VI--NASMQDPLAEIRRIT--ESKG   97 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCSE-EE--ETTTSCHHHHHHHHT--TTSC
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH----cCCce-ee--ccCCcCHHHHHHHHh--hccc
Confidence            578999999999999999999999996 68889988776554432    24332 22  334433333333221  1136


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|.++|
T Consensus        98 ~d~vid~~g  106 (170)
T d1jvba2          98 VDAVIDLNN  106 (170)
T ss_dssp             EEEEEESCC
T ss_pred             chhhhcccc
Confidence            999999998

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.50  E-value=0.0006  Score=48.16  Aligned_cols=118  Identities=13%  Similarity=0.167  Sum_probs=71.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      |++.|+|+ |.+|..++..|+.+|.  +++++|.++++++....++.+.    ..+......|   .+.           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH-----------
Confidence            67888995 8999999999999884  6999999988877666666532    2233333333   222           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ...-|++|.+||.....  .+.+.++-...++.|    ..+++.+.+.+.+...       .+.++++|-..
T Consensus        67 l~~adiVVitaG~~~~~--~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p-------~aivivvtNPv  125 (146)
T d1hyha1          67 LADADVVISTLGNIKLQ--QDNPTGDRFAELKFT----SSMVQSVGTNLKESGF-------HGVLVVISNPV  125 (146)
T ss_dssp             GTTCSEEEECCSCGGGT--C-------CTTHHHH----HHHHHHHHHHHHHTTC-------CSEEEECSSSH
T ss_pred             hccccEEEEeccccccc--cccCCccHHHHHHHH----HHHHHHHHHHHhhcCC-------CeEEEEecCcH
Confidence            23589999999953211  111111222334444    3556777777766532       25566666543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.48  E-value=0.00065  Score=49.12  Aligned_cols=77  Identities=21%  Similarity=0.165  Sum_probs=52.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|.+++|.|+ |++|...+..+...|++|+++++++++++... ++   |.+..+..-+-.+.      .   ....+.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l---Ga~~~i~~~~~~~~------~---~~~~~~   91 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADHYIATLEEGDW------G---EKYFDT   91 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEEEEGGGTSCH------H---HHSCSC
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc---CCcEEeeccchHHH------H---Hhhhcc
Confidence            35889999987 89999988888788999999999988765533 33   44433322222221      1   122357


Q ss_pred             ccEEEECCCCC
Q 024976           90 LDILVNAAAGN  100 (259)
Q Consensus        90 id~li~~ag~~  100 (259)
                      +|.++.+.+..
T Consensus        92 ~d~vi~~~~~~  102 (168)
T d1piwa2          92 FDLIVVCASSL  102 (168)
T ss_dssp             EEEEEECCSCS
T ss_pred             cceEEEEecCC
Confidence            99999988753

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.42  E-value=0.00073  Score=48.87  Aligned_cols=45  Identities=16%  Similarity=0.232  Sum_probs=39.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAAL   56 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~   56 (259)
                      ++|.++|.|+ ||.+++++..|.+.|+ ++.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5789999987 7999999999999998 5999999998888777665

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.42  E-value=0.0012  Score=46.48  Aligned_cols=117  Identities=17%  Similarity=0.175  Sum_probs=67.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ++.|+||+|.+|.+++..|+.+|.  +++++|.+..+.+  ..++....... ....-+. ..+..+.       +..-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~~~-~~~~~~~-~~~~~~~-------~~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIETRA-TVKGYLG-PEQLPDC-------LKGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSSSC-EEEEEES-GGGHHHH-------HTTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhhhc-CCCeEEc-CCChHHH-------hCCCC
Confidence            689999999999999999999986  5999998765332  33444322211 1111111 1111121       23689


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ++|..+|.... +  ..+   -...++.|..    .++-+.+.+.+...       .+.++++|...
T Consensus        71 ivVitag~~~~-~--g~s---R~~ll~~N~~----i~~~i~~~i~~~~p-------~~iiivvtNPv  120 (144)
T d1mlda1          71 VVVIPAGVPRK-P--GMT---RDDLFNTNAT----IVATLTAACAQHCP-------DAMICIISNPV  120 (144)
T ss_dssp             EEEECCSCCCC-T--TCC---GGGGHHHHHH----HHHHHHHHHHHHCT-------TSEEEECSSCH
T ss_pred             EEEECCCcCCC-C--CCC---cchHHHHHHH----HHHHHHHHHHhcCC-------CeEEEEecCch
Confidence            99999996321 1  122   2344555554    44555665555432       26677776653

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.38  E-value=0.0041  Score=43.40  Aligned_cols=113  Identities=12%  Similarity=0.066  Sum_probs=70.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCC--hhhHHHHHHHHHh---cCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRR--KTVLRSAVAALHS---LGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~--~~~~~~~~~~~~~---~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++.|+||+|.+|..++..|+.+|.  +++++|.+  .+..+....++..   ...+..+...|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            688999999999999999999986  59999864  3334444444543   233344433332   21           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                      ...-|++|..||... .+  ..+   -.+.++.|    .-+.+.+.+.+.+...       .+.++.++..
T Consensus        68 ~~~aDiVvitaG~~~-~~--g~~---R~dl~~~N----~~I~~~i~~~i~~~~p-------~~i~ivvtNP  121 (142)
T d1o6za1          68 TAGSDVVVITAGIPR-QP--GQT---RIDLAGDN----APIMEDIQSSLDEHND-------DYISLTTSNP  121 (142)
T ss_dssp             GTTCSEEEECCCCCC-CT--TCC---HHHHHHHH----HHHHHHHHHHHHTTCS-------CCEEEECCSS
T ss_pred             hhhcCEEEEeccccc-cc--CCc---hhhHHHHH----HHHHHHHHHHHHhcCC-------CceEEEecCh
Confidence            236899999999532 21  123   23444444    3466677777776542       3666666554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.37  E-value=0.0028  Score=44.49  Aligned_cols=103  Identities=13%  Similarity=0.127  Sum_probs=62.8

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChh--hHHHHHHHHHhc----CCCeEE--EEcCCCCHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKT--VLRSAVAALHSL----GIPAIG--LEGDVRKREDAVRVVEST   83 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~--~~~~~~~~~~~~----~~~v~~--~~~Dl~~~~~~~~~~~~~   83 (259)
                      ++.|+||+|.+|..++..|+.+|.  +++++|++++  +++....++...    ...++.  ...+  +.          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~----------   69 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NL----------   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hH----------
Confidence            589999999999999999999984  7999998864  344444455431    222332  2221  12          


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcC
Q 024976           84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG  139 (259)
Q Consensus        84 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  139 (259)
                       +.+..-|++|.+||....   ...+..   ..++.|..    +++.+.+.+.+..
T Consensus        70 -~~l~~aDvVVitAG~~~~---~g~sR~---dl~~~Na~----iv~~i~~~i~~~~  114 (145)
T d1hyea1          70 -RIIDESDVVIITSGVPRK---EGMSRM---DLAKTNAK----IVGKYAKKIAEIC  114 (145)
T ss_dssp             -GGGTTCSEEEECCSCCCC---TTCCHH---HHHHHHHH----HHHHHHHHHHHHC
T ss_pred             -HHhccceEEEEecccccC---CCCChh---hhhhhhHH----HHHHHHHHHhccC
Confidence             122368999999996322   122332   34444543    4555566665543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.32  E-value=0.00055  Score=49.83  Aligned_cols=78  Identities=15%  Similarity=0.235  Sum_probs=50.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeE-EEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAI-AIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v-v~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      -.|.+++|.|+ |++|...+..+...|+++ +++++++++++.. +++   +. .+++  |..+++ +.+.++++.  .+
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga-~~~i--~~~~~~-~~~~i~~~t--~g   95 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GA-THVI--NSKTQD-PVAAIKEIT--DG   95 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TC-SEEE--ETTTSC-HHHHHHHHT--TS
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CC-eEEE--eCCCcC-HHHHHHHHc--CC
Confidence            35789999987 899999999988899975 5567776655443 333   33 2233  344432 222222221  25


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      ++|++|.+.|
T Consensus        96 g~D~vid~~G  105 (174)
T d1f8fa2          96 GVNFALESTG  105 (174)
T ss_dssp             CEEEEEECSC
T ss_pred             CCcEEEEcCC
Confidence            7999999999

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.29  E-value=0.00016  Score=52.89  Aligned_cols=77  Identities=17%  Similarity=0.154  Sum_probs=51.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc--
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--   87 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~--   87 (259)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.. +++   |.. ++  +|..+++..++    +.+..  
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~l---Ga~-~~--i~~~~~~~~~~----v~~~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFY---GAT-DI--LNYKNGHIEDQ----VMKLTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHH---TCS-EE--ECGGGSCHHHH----HHHHTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hhh---Ccc-cc--ccccchhHHHH----HHHHhhc
Confidence            5789999986 8999999999999998 589999988765444 333   332 22  24444322222    33332  


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ..+|++|.+.|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            259999999993

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.29  E-value=0.004  Score=44.13  Aligned_cols=106  Identities=14%  Similarity=0.169  Sum_probs=62.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC---------eEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA---------AIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~---------~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ..++.|+||+|.+|..++..|+..+.         +++..+++.+.++....++.... ..+..+...-.+.        
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   75 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK--------   75 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH--------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh--------
Confidence            34899999999999999999998653         12223444555555555554432 2344443332222        


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhc
Q 024976           82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG  138 (259)
Q Consensus        82 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  138 (259)
                         +.+...|++|..+|....   ...+.+++   +..|    ...++.+.+.+.+.
T Consensus        76 ---~~~~~advViitaG~~~~---pg~~r~dl---~~~N----~~i~~~~~~~i~k~  119 (154)
T d1y7ta1          76 ---VAFKDADYALLVGAAPRK---AGMERRDL---LQVN----GKIFTEQGRALAEV  119 (154)
T ss_dssp             ---HHTTTCSEEEECCCCCCC---TTCCHHHH---HHHH----HHHHHHHHHHHHHH
T ss_pred             ---hhcccccEEEeecCcCCC---CCCcHHHH---HHHH----HHHHHHHHHHHHHh
Confidence               223478999999996432   22344443   3334    34566666666664

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.28  E-value=0.0076  Score=42.04  Aligned_cols=114  Identities=14%  Similarity=0.097  Sum_probs=69.8

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc---CCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++.|+|+ |.+|..++..|+.+|.  +++++|.++++.+....++...   .....+...+  +.+.           .
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~~-----------~   67 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPEI-----------C   67 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHHH-----------h
Confidence            35778896 9999999999999986  6999999988777666666543   1222232221  1111           1


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                      ..-|++|..+|....   ...+..   +.+..|.    .+.+-+.+.+.+...       .+.++++|..
T Consensus        68 ~daDvVVitaG~~~~---~g~~R~---dl~~~N~----~i~~~i~~~i~~~~p-------~ai~ivvtNP  120 (143)
T d1llda1          68 RDADMVVITAGPRQK---PGQSRL---ELVGATV----NILKAIMPNLVKVAP-------NAIYMLITNP  120 (143)
T ss_dssp             TTCSEEEECCCCCCC---TTCCHH---HHHHHHH----HHHHHHHHHHHHHCT-------TSEEEECCSS
T ss_pred             hCCcEEEEecccccC---CCCchh---hhhhhhH----HHHHHHHHHHHhhCC-------CeEEEEeCCc
Confidence            257999999996321   123332   3444443    455666666665532       2556666643

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.00091  Score=47.47  Aligned_cols=76  Identities=12%  Similarity=0.104  Sum_probs=59.4

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL   93 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   93 (259)
                      .++|.|. +.+|+.+++.|.++|.+|++++.+++......++...  ..+.++.+|.++++.++++-      ....|.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~--~~~~vi~Gd~~d~~~L~~a~------i~~a~~v   75 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAG------IDRCRAI   75 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHT------TTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc--CCcEEEEccCcchHHHHHhc------cccCCEE
Confidence            5778887 5999999999999999999999888765555555543  35889999999998876652      1367888


Q ss_pred             EECCC
Q 024976           94 VNAAA   98 (259)
Q Consensus        94 i~~ag   98 (259)
                      |...+
T Consensus        76 i~~~~   80 (153)
T d1id1a_          76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEccc
Confidence            87765

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00051  Score=49.70  Aligned_cols=75  Identities=20%  Similarity=0.273  Sum_probs=53.0

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|.+++|.|+ |++|...+..+...|+++++++++.++.+. .+++   +....   .|..+.+...       .....
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l---Gad~~---i~~~~~~~~~-------~~~~~   93 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL---GADEV---VNSRNADEMA-------AHLKS   93 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH---TCSEE---EETTCHHHHH-------TTTTC
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc---CCcEE---EECchhhHHH-------HhcCC
Confidence            35789999986 899999998888899999999988876543 3343   43322   3455554322       12247


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|++|.+.|.
T Consensus        94 ~D~vid~~g~  103 (168)
T d1uufa2          94 FDFILNTVAA  103 (168)
T ss_dssp             EEEEEECCSS
T ss_pred             Cceeeeeeec
Confidence            9999999984

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00017  Score=46.92  Aligned_cols=74  Identities=18%  Similarity=0.126  Sum_probs=49.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +++||+++|.|. |..|+++++.|.++|++|.+.|.+.....  .+++.   ..+.+...... ...    +       .
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~---~~~~~~~~~~~-~~~----~-------~   63 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLP---EAVERHTGSLN-DEW----L-------M   63 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSC---TTSCEEESBCC-HHH----H-------H
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHh---hccceeecccc-hhh----h-------c
Confidence            689999999998 56899999999999999999998654211  11121   12333333322 211    1       2


Q ss_pred             CccEEEECCCCC
Q 024976           89 KLDILVNAAAGN  100 (259)
Q Consensus        89 ~id~li~~ag~~  100 (259)
                      .+|.+|..+|+.
T Consensus        64 ~~d~vi~SPGi~   75 (93)
T d2jfga1          64 AADLIVASPGIA   75 (93)
T ss_dssp             HCSEEEECTTSC
T ss_pred             cCCEEEECCCCC
Confidence            589999999974

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.23  E-value=0.0065  Score=42.25  Aligned_cols=112  Identities=15%  Similarity=0.100  Sum_probs=70.0

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc---CCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      ++.|+|+ |.+|..++..|+.+|.  +++++|.++++++....++...   .........|.   ++           +.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------hc
Confidence            5778897 8899999999998874  6999999988877666665432   22344443332   21           23


Q ss_pred             CccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                      .-|++|.++|.....   ..+..   ..+..|    ..+.+.+.+.+.+...       .+.++++|..
T Consensus        67 ~adivvitag~~~~~---g~~r~---dl~~~N----~~I~~~i~~~i~~~~p-------~aivivvtNP  118 (140)
T d1a5za1          67 GSDVVIVAAGVPQKP---GETRL---QLLGRN----ARVMKEIARNVSKYAP-------DSIVIVVTNP  118 (140)
T ss_dssp             TCSEEEECCCCCCCS---SCCHH---HHHHHH----HHHHHHHHHHHHHHCT-------TCEEEECSSS
T ss_pred             CCCEEEEecccccCC---Ccchh---hhhccc----cchHHHHHHHHHhcCC-------CcEEEEeCCc
Confidence            589999999964321   12322   233334    3456667777766542       2556665543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.22  E-value=0.0017  Score=46.22  Aligned_cols=121  Identities=13%  Similarity=0.086  Sum_probs=71.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      -+.+++.|+|+ |.+|..++..|+..+. +++++|.+++.++....++...    +.......  -.+.++   .     
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~~~---~-----   73 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSYEA---A-----   73 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSHHH---H-----
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec--cCchhh---h-----
Confidence            35678899997 8999999999998885 7999999988777766666532    22222221  122221   1     


Q ss_pred             HHcCCccEEEECCCCCCC-CCCC-CCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           85 NHFGKLDILVNAAAGNFL-VPAE-DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        85 ~~~g~id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                        ...-|++|.++|.... +... +.+.   ...+..|.    .+++-+.+.+.+...       .+.++++|..
T Consensus        74 --~~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~----~iv~~i~~~i~~~~p-------~aiviivsNP  132 (154)
T d1pzga1          74 --LTGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNS----KIIREIGQNIKKYCP-------KTFIIVVTNP  132 (154)
T ss_dssp             --HTTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHH----HHHHHHHHHHHHHCT-------TCEEEECCSS
T ss_pred             --hcCCCeEEEecccccCCCCCCcccch---hhhhhhhH----HHHHHHHHHHHhcCC-------CcEEEEeCCc
Confidence              1268999999996422 2111 1121   23333343    345556666655432       2556666654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.22  E-value=0.0017  Score=47.19  Aligned_cols=81  Identities=17%  Similarity=0.199  Sum_probs=53.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      -.|.+++|+|+ ||+|...+..+...|+ +|+.+++++++++... ++   |....+-.-|-.+.  .+...+..  ..+
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~---GA~~~in~~~~~~~--~~~~~~~~--~g~   98 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AV---GATECISPKDSTKP--ISEVLSEM--TGN   98 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HH---TCSEEECGGGCSSC--HHHHHHHH--HTS
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hc---CCcEEECccccchH--HHHHHHHh--ccc
Confidence            45889999986 8999999999999996 6999999998876433 33   43333322222211  12222211  124


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      .+|++|.+.|.
T Consensus        99 G~d~vi~~~g~  109 (176)
T d1d1ta2          99 NVGYTFEVIGH  109 (176)
T ss_dssp             CCCEEEECSCC
T ss_pred             cceEEEEeCCc
Confidence            79999999993

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.19  E-value=0.0002  Score=52.00  Aligned_cols=76  Identities=22%  Similarity=0.263  Sum_probs=51.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH--cC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH--FG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~--~g   88 (259)
                      ++.++||+||+||+|...+......|++|+.+.++.++.+.+.    +.+.+..+.      .++   ...+..+.  -+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~----~lGad~vi~------~~~---~~~~~~~~~~~~   89 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK----QLGASEVIS------RED---VYDGTLKALSKQ   89 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH----HHTCSEEEE------HHH---HCSSCCCSSCCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH----hhcccceEe------ccc---hhchhhhcccCC
Confidence            4668999999999999999888888999999999877655433    234443322      111   11111111  14


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      ++|+++.+.|.
T Consensus        90 gvd~vid~vgg  100 (167)
T d1tt7a2          90 QWQGAVDPVGG  100 (167)
T ss_dssp             CEEEEEESCCT
T ss_pred             CceEEEecCcH
Confidence            69999999884

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.19  E-value=0.00039  Score=50.73  Aligned_cols=81  Identities=17%  Similarity=0.211  Sum_probs=53.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      -.|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+...+    .+....+...+-  .+.+.+..+...  .+
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~----~Ga~~~i~~~~~--~~~~~~~~~~~~--~~   97 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGATECVNPQDY--KKPIQEVLTEMS--NG   97 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSEEECGGGC--SSCHHHHHHHHT--TS
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH----hCCeeEEecCCc--hhHHHHHHHHHh--cC
Confidence            35789999999 6899999999999986 68888998887654332    233222221222  122333333322  25


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      .+|++|.+.|.
T Consensus        98 G~D~vid~~G~  108 (176)
T d2jhfa2          98 GVDFSFEVIGR  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEecCCc
Confidence            79999999993

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.18  E-value=0.018  Score=41.52  Aligned_cols=107  Identities=14%  Similarity=0.100  Sum_probs=62.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHc---CC----eEEEEeCChh--hHHHHHHHHHhcCC-CeEEEEcCCCCHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKH---GA----AIAIMGRRKT--VLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~---G~----~vv~~~r~~~--~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~   80 (259)
                      +..++.||||+|.||.+++..|++.   |.    .+.+++.+..  .++...-++..... ....+.. -++..      
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~~------   95 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDPY------   95 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCHH------
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccch------
Confidence            3457999999999999999999974   32    3555565443  34444445544322 2222221 12211      


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhc
Q 024976           81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG  138 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  138 (259)
                          +.+...|++|..+|....   ...+.++   .++.|    ...++...+.+.+.
T Consensus        96 ----~~~~~aDvVvi~ag~~rk---pg~tR~D---ll~~N----~~I~k~~~~~i~~~  139 (175)
T d7mdha1          96 ----EVFEDVDWALLIGAKPRG---PGMERAA---LLDIN----GQIFADQGKALNAV  139 (175)
T ss_dssp             ----HHTTTCSEEEECCCCCCC---TTCCHHH---HHHHH----HHHHHHHHHHHHHH
T ss_pred             ----hhccCCceEEEeeccCCC---CCCcHHH---HHHHH----HHHHHHHHHHHHhh
Confidence                234579999999996321   2234444   44445    34556666666664

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.0003  Score=51.54  Aligned_cols=42  Identities=19%  Similarity=0.279  Sum_probs=36.2

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      .+.+++|+||+||+|...+......|++|+.+.++.++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            345899999999999999999889999999999988875443

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.15  E-value=0.0031  Score=44.07  Aligned_cols=113  Identities=12%  Similarity=0.102  Sum_probs=68.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhc----CCCeEEEE-cCCCCHHHHHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLE-GDVRKREDAVRVVESTINH   86 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~-~Dl~~~~~~~~~~~~~~~~   86 (259)
                      |++.|+|+ |.+|.++|..|+.++. +++++|.+++..+....++...    +....+.. -|..              .
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~--------------~   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA--------------D   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG--------------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH--------------H
Confidence            57788886 8999999999998886 7999999888777666666432    22222322 2222              1


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                      ...-|++|.+||.....      .++-.+.+..|.    ..++...+.+.+...       .+.++++|..
T Consensus        67 ~~~advvvitag~~~~~------~~~r~dl~~~N~----~i~~~i~~~i~k~~p-------~aivivvtNP  120 (142)
T d1uxja1          67 TANSDVIVVTSGAPRKP------GMSREDLIKVNA----DITRACISQAAPLSP-------NAVIIMVNNP  120 (142)
T ss_dssp             GTTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCT-------TCEEEECSSS
T ss_pred             hcCCCEEEEeeeccCCc------CcchhHHHhHHH----HHHHHHHHHHhccCC-------CceEEEeCCc
Confidence            23589999999964321      112233344443    467777888777543       2556655543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.13  E-value=0.00088  Score=49.71  Aligned_cols=80  Identities=14%  Similarity=0.119  Sum_probs=51.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      -.|.+++|.|+ |++|...+..+...|+ +|+++++++++++...    +.+... +  .|-.+. ++.+.+.++. .-.
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~----~~Ga~~-~--~~~~~~-~~~~~i~~~t-~g~   93 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFEI-A--DLSLDT-PLHEQIAALL-GEP   93 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCEE-E--ETTSSS-CHHHHHHHHH-SSS
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh----hccccE-E--EeCCCc-CHHHHHHHHh-CCC
Confidence            35789999986 7999888888878888 5888898887665433    234322 1  233332 3222222222 123


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      .+|++|.+.|.
T Consensus        94 g~D~vid~vG~  104 (195)
T d1kola2          94 EVDCAVDAVGF  104 (195)
T ss_dssp             CEEEEEECCCT
T ss_pred             CcEEEEECccc
Confidence            69999999995

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.0051  Score=43.11  Aligned_cols=116  Identities=11%  Similarity=0.105  Sum_probs=69.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHc-C--CeEEEEeCChhhHHHHHHHHHhcCCCeE-EEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           14 VALLTGGGSGIGFEISLQLGKH-G--AAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~-G--~~vv~~~r~~~~~~~~~~~~~~~~~~v~-~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++.|+|++|.+|.+++..|+.+ +  .+++++|.++ ..+...-++........ .....-.+.+.+           ..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~-----------~~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EG   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHHH-----------TT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcccc-----------CC
Confidence            6889999999999999988754 4  4799999864 44555556655433222 122333344332           25


Q ss_pred             ccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      -|++|.++|.....   ..+   -.+.+..|.    ...+...+.+.+...       .+.++++|...
T Consensus        70 aDvvvitaG~~~k~---g~~---R~dl~~~N~----~i~~~v~~~i~~~~p-------~aivivvtNPv  121 (145)
T d2cmda1          70 ADVVLISAGVRRKP---GMD---RSDLFNVNA----GIVKNLVQQVAKTCP-------KACIGIITNPV  121 (145)
T ss_dssp             CSEEEECCSCCCCT---TCC---GGGGHHHHH----HHHHHHHHHHHHHCT-------TSEEEECSSSH
T ss_pred             CCEEEECCCccCCC---Ccc---hhhHHHHHH----HHHHHHHHHHHhhCC-------CcEEEEccCCc
Confidence            79999999964221   112   234455554    345555566655432       25677676653

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.06  E-value=0.022  Score=39.48  Aligned_cols=73  Identities=10%  Similarity=0.121  Sum_probs=50.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++.|+|+ |.+|..++..|+..|.  +++++|.++++++....++...    ..+..+...+  +.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence            5778896 8999999999999984  7999999988776655554332    2234443322  2221           2


Q ss_pred             CCccEEEECCCCC
Q 024976           88 GKLDILVNAAAGN  100 (259)
Q Consensus        88 g~id~li~~ag~~  100 (259)
                      ...|++|.++|..
T Consensus        68 ~dadvvvitag~~   80 (142)
T d1guza1          68 ANSDIVIITAGLP   80 (142)
T ss_dssp             TTCSEEEECCSCC
T ss_pred             cCCeEEEEEEecC
Confidence            3689999999964

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.04  E-value=0.0012  Score=44.28  Aligned_cols=39  Identities=21%  Similarity=0.266  Sum_probs=34.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      .+++||+++|+|++ .+|..-++.|.+.|++|++++....
T Consensus         8 l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCC
Confidence            47999999999987 5999999999999999999876644

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.03  E-value=0.00079  Score=48.88  Aligned_cols=79  Identities=16%  Similarity=0.224  Sum_probs=51.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~~~~~   87 (259)
                      -.|.+++|.|+ +|+|...+..+...|++ |+.+++++++++ ..+++   |.... +  |..+ .+.+.+.+++..  .
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l---Ga~~~-i--~~~~~~~~~~~~~~~~~--~   96 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF---GATEC-I--NPQDFSKPIQEVLIEMT--D   96 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH---TCSEE-E--CGGGCSSCHHHHHHHHT--T
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh---CCcEE-E--eCCchhhHHHHHHHHHc--C
Confidence            46789999998 59999999999999985 666777776644 34444   33222 2  2221 223344433322  2


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      +.+|++|.+.|
T Consensus        97 ~g~D~vid~~G  107 (176)
T d2fzwa2          97 GGVDYSFECIG  107 (176)
T ss_dssp             SCBSEEEECSC
T ss_pred             CCCcEeeecCC
Confidence            47999999998

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.03  E-value=0.0037  Score=45.29  Aligned_cols=85  Identities=15%  Similarity=0.142  Sum_probs=60.6

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH---------------HhcCCCeEEEEcCCCCHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---------------HSLGIPAIGLEGDVRKREDAV   77 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~---------------~~~~~~v~~~~~Dl~~~~~~~   77 (259)
                      +.+-|.|- |-+|.++++.|++.|++|++++|++++.+++.+.-               ...-.....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            45677776 79999999999999999999999998887765431               111122334555667778888


Q ss_pred             HHHHHHHHHcCCccEEEECCC
Q 024976           78 RVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        78 ~~~~~~~~~~g~id~li~~ag   98 (259)
                      +.++.+.....+=+++|...-
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888877766555566776654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.01  E-value=0.0032  Score=44.01  Aligned_cols=113  Identities=12%  Similarity=0.125  Sum_probs=65.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +++.|+|+ |.+|..++..|+.+|.  +++++|++++.++....++....   ........   ++           +..
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~-----------~~~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY-----------SDV   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH-----------HHh
Confidence            35667787 9999999999999876  69999999887666666665431   12222221   11           123


Q ss_pred             CCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        88 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                      ..-|++|..+|.... +  ..+   -...+..|.    .+++.+.+.+.+...       .+.++++|..
T Consensus        67 ~~adivvitag~~~~-~--~~~---r~~l~~~N~----~i~~~i~~~i~~~~p-------~ai~ivvtNP  119 (142)
T d1y6ja1          67 KDCDVIVVTAGANRK-P--GET---RLDLAKKNV----MIAKEVTQNIMKYYN-------HGVILVVSNP  119 (142)
T ss_dssp             TTCSEEEECCCC---------C---HHHHHHHHH----HHHHHHHHHHHHHCC-------SCEEEECSSS
T ss_pred             CCCceEEEecccccC-c--Ccc---hhHHhhHHH----HHHHHHHHHhhccCC-------CceEEEecCh
Confidence            468999999995421 1  122   233344443    556666676666432       2556666553

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.00  E-value=0.0013  Score=46.59  Aligned_cols=83  Identities=12%  Similarity=0.121  Sum_probs=53.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +..=|++.|+||.|.+|.++++.|.++|++|.+.+|+........    .......+...++   ..+...+.++.....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~----~~~~~~v~~~~~~---~~~~~v~~~~~~~~~   78 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI----LANADVVIVSVPI---NLTLETIERLKPYLT   78 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH----HTTCSEEEECSCG---GGHHHHHHHHGGGCC
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh----hhhccccccccch---hhheeeeeccccccc
Confidence            344579999999999999999999999999999999876533321    1233444444443   345555555554433


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      +=.+++..+.
T Consensus        79 ~~~iiiD~~S   88 (152)
T d2pv7a2          79 ENMLLADLTS   88 (152)
T ss_dssp             TTSEEEECCS
T ss_pred             CCceEEEecc
Confidence            2234454444

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.00  E-value=0.0023  Score=45.85  Aligned_cols=77  Identities=17%  Similarity=0.223  Sum_probs=50.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      -.|.+++|.|+ |++|...+..+...|++|+.+++++++++...    +.+.... +  |.++.+..+++    .+..+.
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~----~~Ga~~~-i--~~~~~~~~~~~----~~~~~g   93 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR----KLGASLT-V--NARQEDPVEAI----QRDIGG   93 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEE-E--ETTTSCHHHHH----HHHHSS
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh----ccCcccc-c--cccchhHHHHH----HHhhcC
Confidence            35789999886 89999999988889999999999987765432    3344322 2  34443333332    233345


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      .|.+|-+++
T Consensus        94 ~~~~i~~~~  102 (166)
T d1llua2          94 AHGVLVTAV  102 (166)
T ss_dssp             EEEEEECCS
T ss_pred             Ccccccccc
Confidence            666666655

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.99  E-value=0.0086  Score=42.12  Aligned_cols=118  Identities=10%  Similarity=0.083  Sum_probs=72.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhc----CCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++.|+|+ |.+|..++..|+..+. +++++|++++..+....++...    +.+..+...+-  +           +..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~-----------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--Y-----------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--G-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--c-----------ccc
Confidence            47888895 8999999998888886 6999999988777766666432    33344443321  1           122


Q ss_pred             CCccEEEECCCCCCC-CCC-CCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 024976           88 GKLDILVNAAAGNFL-VPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL  158 (259)
Q Consensus        88 g~id~li~~ag~~~~-~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
                      ..-|++|.++|.... +.. .+.+   -...+..|.    .+.+-+.+.+.+...       .+.++++|...
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~---R~~l~~~N~----~iv~~i~~~i~~~~p-------~aivivvtNPv  128 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWN---RDDLLPLNN----KIMIEIGGHIKKNCP-------NAFIIVVTNPV  128 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCC---GGGGHHHHH----HHHHHHHHHHHHHCT-------TSEEEECSSSH
T ss_pred             CCCcEEEEecccccCCCCCccccc---hhHHHHHHH----HHHHHHHHHHHhcCC-------CeEEEEecCch
Confidence            368999999996432 211 1111   123344443    456666666665532       25566666543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.96  E-value=0.005  Score=43.97  Aligned_cols=81  Identities=19%  Similarity=0.147  Sum_probs=55.5

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH--h--------cCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--S--------LGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~--~--------~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      ++.|.|. |-+|.++++.|.++|++|++++|+.+..+...+.-.  .        ...++.++.+   ....+.++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            4677765 899999999999999999999999877665443210  0        1233444433   356778888887


Q ss_pred             HHHcCCccEEEECCC
Q 024976           84 INHFGKLDILVNAAA   98 (259)
Q Consensus        84 ~~~~g~id~li~~ag   98 (259)
                      .....+=.+++...+
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            666555556666654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00097  Score=49.37  Aligned_cols=44  Identities=16%  Similarity=0.326  Sum_probs=38.1

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH   57 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~   57 (259)
                      |++.|.|+ |-+|..+|..++..|++|+++|++++.++...+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            68999998 689999999999999999999999887776655543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.91  E-value=0.002  Score=46.50  Aligned_cols=77  Identities=21%  Similarity=0.252  Sum_probs=49.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .|.+++|.|+ |++|...+..+...|+. |+++++++++++...    +.+.. .++  |-. .+.+++..+...  -..
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~~ga~-~~i--~~~-~~~~~~~~~~~~--~~g  100 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGAD-HVV--DAR-RDPVKQVMELTR--GRG  100 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCS-EEE--ETT-SCHHHHHHHHTT--TCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----hcccc-eee--cCc-ccHHHHHHHhhC--CCC
Confidence            4789999886 89999999999888975 677788876654433    23432 233  222 233333333211  136


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++|.+.|
T Consensus       101 ~d~vid~~g  109 (172)
T d1h2ba2         101 VNVAMDFVG  109 (172)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEEecC
Confidence            999999999

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.84  E-value=0.0012  Score=48.07  Aligned_cols=42  Identities=12%  Similarity=0.110  Sum_probs=36.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA   54 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~   54 (259)
                      .|++.|.|+ |.+|.+++..|+++|++|.+++|+++..+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            478999998 699999999999999999999999877666544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.81  E-value=0.00091  Score=48.67  Aligned_cols=81  Identities=22%  Similarity=0.311  Sum_probs=53.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHH-HHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE-DAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~-~~~~~~~~~~~~   86 (259)
                      .-.|.+++|.|+ ||+|...+..+...|+ +|+++++++++++...+    .+....+   |.++.+ .+.+..+..  .
T Consensus        25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~----lGa~~~i---~~~~~d~~~~~~~~~~--~   94 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGATECL---NPKDYDKPIYEVICEK--T   94 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCSEEE---CGGGCSSCHHHHHHHH--T
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH----cCCcEEE---cCCCchhHHHHHHHHh--c
Confidence            346889999986 8999999999999998 58889999887755432    3433222   222211 122222221  1


Q ss_pred             cCCccEEEECCCC
Q 024976           87 FGKLDILVNAAAG   99 (259)
Q Consensus        87 ~g~id~li~~ag~   99 (259)
                      .+.+|++|.+.|.
T Consensus        95 ~~G~d~vid~~g~  107 (174)
T d1p0fa2          95 NGGVDYAVECAGR  107 (174)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEEEEcCCC
Confidence            2479999999983

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.73  E-value=0.0022  Score=46.49  Aligned_cols=80  Identities=18%  Similarity=0.200  Sum_probs=51.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      -.|.+++|.|+ |+||...+..+...|++ |+++++++++++. .+++   |... ++...-. ++.+....+..  ..+
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~-a~~~---Ga~~-~i~~~~~-~~~~~~~~~~~--~~~   97 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK-AKAL---GATD-CLNPREL-DKPVQDVITEL--TAG   97 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHT---TCSE-EECGGGC-SSCHHHHHHHH--HTS
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHH-HHHh---CCCc-ccCCccc-hhhhhhhHhhh--hcC
Confidence            35789999975 99999999999999995 7778888876533 3333   3322 2221111 12233333222  235


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      .+|++|.+.|
T Consensus        98 G~d~vie~~G  107 (174)
T d1e3ia2          98 GVDYSLDCAG  107 (174)
T ss_dssp             CBSEEEESSC
T ss_pred             CCcEEEEecc
Confidence            7999999999

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.72  E-value=0.0048  Score=44.08  Aligned_cols=41  Identities=17%  Similarity=0.173  Sum_probs=34.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      .|.+++|.|+ |+||...+..+...|++|+++++++++++..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            5789999875 8999999988889999999999988776543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.70  E-value=0.039  Score=38.16  Aligned_cols=112  Identities=10%  Similarity=0.025  Sum_probs=68.9

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHHhc----CCCeEEEE-cCCCCHHHHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLE-GDVRKREDAVRVVESTINH   86 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~-~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++.|+|+ |.+|..++..|+.+|.  +++++|.+++..+....++...    .....+.. -|.   +           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~-----------~   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S-----------L   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---H-----------H
Confidence            5778896 8999999999998885  5999999988777665556432    22233332 232   1           1


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT  157 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
                      +..-|++|..+|.....   ..+.   ...+..|    ....+.+.+.+.+...       .+.++++|..
T Consensus        67 ~~~adiVvitag~~~~~---g~~r---~~l~~~n----~~i~~~i~~~i~~~~p-------~aivivvtNP  120 (142)
T d1ojua1          67 LKGSEIIVVTAGLARKP---GMTR---LDLAHKN----AGIIKDIAKKIVENAP-------ESKILVVTNP  120 (142)
T ss_dssp             GTTCSEEEECCCCCCCS---SCCH---HHHHHHH----HHHHHHHHHHHHTTST-------TCEEEECSSS
T ss_pred             hccccEEEEeccccCCC---CCch---HHHHHHh----hHHHHHHHHHHHhhCC-------CcEEEEecCC
Confidence            23689999999953321   1232   2333333    3456666777766532       2556655553

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.68  E-value=0.0022  Score=47.71  Aligned_cols=43  Identities=16%  Similarity=0.252  Sum_probs=37.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS   51 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~   51 (259)
                      .+|+||+++|.| .|.+|..+++.|.+.|++|++.+.+......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            469999999997 6689999999999999999999988766544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.68  E-value=0.0082  Score=42.83  Aligned_cols=87  Identities=18%  Similarity=0.123  Sum_probs=63.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .+.-+++|.|+. -.|++.++.....|+.|.++|.+.++++.+......   .+.+.   .++.+.+.+.+.       .
T Consensus        30 v~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~~~---~~~~~~l~~~~~-------~   95 (168)
T d1pjca1          30 VKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVELL---YSNSAEIETAVA-------E   95 (168)
T ss_dssp             BCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEEE---ECCHHHHHHHHH-------T
T ss_pred             CCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---cceee---hhhhhhHHHhhc-------c
Confidence            467799999876 789999999999999999999999988887766543   23333   556666665554       5


Q ss_pred             ccEEEECCCCCCCCCCCCCCH
Q 024976           90 LDILVNAAAGNFLVPAEDLSP  110 (259)
Q Consensus        90 id~li~~ag~~~~~~~~~~~~  110 (259)
                      .|++|.++-+.......-.+.
T Consensus        96 aDivI~aalipG~~aP~lIt~  116 (168)
T d1pjca1          96 ADLLIGAVLVPGRRAPILVPA  116 (168)
T ss_dssp             CSEEEECCCCTTSSCCCCBCH
T ss_pred             CcEEEEeeecCCcccCeeecH
Confidence            799999998654433333333

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.67  E-value=0.0017  Score=47.27  Aligned_cols=48  Identities=21%  Similarity=0.331  Sum_probs=41.9

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS   58 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~   58 (259)
                      +++||.++|.|++ |.+++++..|.+.| +|.++.|+.++.+.+.+.+..
T Consensus        15 ~~~~k~vlIlGaG-G~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          15 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCc-HHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            5899999999874 88999999998777 899999999999988887754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.67  E-value=0.0014  Score=48.23  Aligned_cols=83  Identities=19%  Similarity=0.254  Sum_probs=52.8

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHH-----HHc
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI-----NHF   87 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~-----~~~   87 (259)
                      |++.|.|+ |-+|..+|..++..|++|+++|++.+.++...+.+...-.  ....-.....+........+.     +..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   81 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLV--GRVDKGRMTPAKMAEVLNGIRPTLSYGDF   81 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHH--HHHTTTSSCHHHHHHHHHHEEEESSSTTG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHH--hhhcccccchhhhhhhhceeecccccccc
Confidence            46889998 7899999999999999999999998877766555432100  001112334555555554432     122


Q ss_pred             CCccEEEECCC
Q 024976           88 GKLDILVNAAA   98 (259)
Q Consensus        88 g~id~li~~ag   98 (259)
                      ...|.+|-+..
T Consensus        82 ~~adlViEav~   92 (186)
T d1wdka3          82 GNVDLVVEAVV   92 (186)
T ss_dssp             GGCSEEEECCC
T ss_pred             cccceeeeeec
Confidence            34577776555

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.59  E-value=0.00065  Score=48.15  Aligned_cols=37  Identities=30%  Similarity=0.492  Sum_probs=33.1

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      ..++||++||+||+ .+|..-++.|.+.|++|.+++..
T Consensus         9 ~~l~gkrvLViGgG-~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGGG-EVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEES-HHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCC
Confidence            46999999999995 69999999999999999998654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.58  E-value=0.035  Score=38.95  Aligned_cols=106  Identities=12%  Similarity=0.128  Sum_probs=58.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCC-------eEEEEeCChh--hHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKT--VLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVE   81 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~-------~vv~~~r~~~--~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~   81 (259)
                      ..++.|+||+|.+|.+++..|+..+.       .+++++.+..  .++...-++... ......+..--.++        
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------   74 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEE--------   74 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHH--------
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccc--------
Confidence            45899999999999999999987542       3666665543  233333333332 22222222211111        


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhc
Q 024976           82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG  138 (259)
Q Consensus        82 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  138 (259)
                         +.+...|++|..+|......   .+.+   +.++.|    ...++.+.+.+.+.
T Consensus        75 ---~~~~~~dvVVitag~~~~~g---~sr~---dll~~N----~~i~k~~~~~i~k~  118 (154)
T d5mdha1          75 ---IAFKDLDVAILVGSMPRRDG---MERK---DLLKAN----VKIFKCQGAALDKY  118 (154)
T ss_dssp             ---HHTTTCSEEEECCSCCCCTT---CCTT---TTHHHH----HHHHHHHHHHHHHH
T ss_pred             ---cccCCceEEEEecccCCCCC---Cchh---HHHHHh----HHHHHHHHHHHHhh
Confidence               12347899999999643221   2222   223333    35566666666554

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.49  E-value=0.0083  Score=43.15  Aligned_cols=80  Identities=14%  Similarity=0.196  Sum_probs=50.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHH-HHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE-DAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~-~~~~~~~~~~~~~   87 (259)
                      -.|.+++|.|+ +|+|...+..+...|+ +|+.+++++++++...    +.|....+   |-.+.+ ..++..+...  -
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~----~~GAd~~i---n~~~~~~~~~~~~~~~~--~   96 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGATDFV---NPNDHSEPISQVLSKMT--N   96 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCCEEE---CGGGCSSCHHHHHHHHH--T
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH----HcCCcEEE---cCCCcchhHHHHHHhhc--c
Confidence            46789999986 6788888888888888 5888898888765433    33443322   222221 1222222221  2


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      +.+|+++.+.|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            479999999993

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.43  E-value=0.014  Score=43.20  Aligned_cols=77  Identities=21%  Similarity=0.226  Sum_probs=61.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++|+++|=.|+++|.   ++..++.+|+ +|+.++.++..++.+.+.+...+.+..++..|+.+.             
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------
Confidence            46899999999988772   3344567887 699999999888888888877778889999997542             


Q ss_pred             cCCccEEEECCCCC
Q 024976           87 FGKLDILVNAAAGN  100 (259)
Q Consensus        87 ~g~id~li~~ag~~  100 (259)
                      .+++|++|.|+.+.
T Consensus       107 ~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 NSRVDIVIMNPPFG  120 (201)
T ss_dssp             CCCCSEEEECCCCS
T ss_pred             CCcCcEEEEcCccc
Confidence            35899999999864

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.41  E-value=0.0086  Score=45.75  Aligned_cols=80  Identities=18%  Similarity=0.264  Sum_probs=52.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC-------------------hhhHHHHHHHHHhcCCCeEEEEcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLGIPAIGLEGD   69 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~-------------------~~~~~~~~~~~~~~~~~v~~~~~D   69 (259)
                      |++++|+|.| .||+|..++..|++.|. ++.++|.+                   ..+.+.+.+.++..++.+.+...+
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            6778999999 55899999999999999 58898863                   235555666666655555444433


Q ss_pred             CC-CHHHHHHHHHHHHHHcCCccEEEECC
Q 024976           70 VR-KREDAVRVVESTINHFGKLDILVNAA   97 (259)
Q Consensus        70 l~-~~~~~~~~~~~~~~~~g~id~li~~a   97 (259)
                      .. +.+......       ...|++|.+.
T Consensus       107 ~~~~~~~~~~~~-------~~~divid~~  128 (247)
T d1jw9b_         107 ALLDDAELAALI-------AEHDLVLDCT  128 (247)
T ss_dssp             SCCCHHHHHHHH-------HTSSEEEECC
T ss_pred             hhhhhccccccc-------cccceeeecc
Confidence            32 233333322       2567777654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.34  E-value=0.0074  Score=42.93  Aligned_cols=84  Identities=14%  Similarity=0.112  Sum_probs=53.1

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh-------cCCCeEEEEcCCCCHHHHHHHH---HHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-------LGIPAIGLEGDVRKREDAVRVV---EST   83 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-------~~~~v~~~~~Dl~~~~~~~~~~---~~~   83 (259)
                      ++-|.|- |-+|..+|+.|+++|++|++.+|++++.+++.+.-..       .-.+..++..-+.+.+.+++++   +.+
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~   80 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI   80 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence            3566654 7999999999999999999999998877765432100       0001234444566777777766   233


Q ss_pred             HHHcCCccEEEECCC
Q 024976           84 INHFGKLDILVNAAA   98 (259)
Q Consensus        84 ~~~~g~id~li~~ag   98 (259)
                      .....+=+++|.+.-
T Consensus        81 ~~~~~~g~iiid~sT   95 (161)
T d1vpda2          81 IEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHCCTTCEEEECSC
T ss_pred             hhccCCCCEEEECCC
Confidence            333333345555544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.25  E-value=0.045  Score=38.83  Aligned_cols=82  Identities=11%  Similarity=0.034  Sum_probs=55.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCChhhHHHHHHHHH-h-----------cCCCeEEEEcCCCCHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALH-S-----------LGIPAIGLEGDVRKREDAVR   78 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~-~-----------~~~~v~~~~~Dl~~~~~~~~   78 (259)
                      |+++|.|. |-||.++++.|.+.|+  +|+.+|++.+.++...+.-. .           ...++.++   ..-.+.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhhh
Confidence            36888875 8999999999999996  58888999877666544310 0           01223333   223567888


Q ss_pred             HHHHHHHHcCCccEEEECCC
Q 024976           79 VVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        79 ~~~~~~~~~g~id~li~~ag   98 (259)
                      +++++......=.+++...+
T Consensus        78 vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCS
T ss_pred             hhhhhhcccccccccccccc
Confidence            88887776655556666665

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.08  E-value=0.0067  Score=43.26  Aligned_cols=41  Identities=22%  Similarity=0.224  Sum_probs=36.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL   49 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~   49 (259)
                      +++||+++|.|.|.-+|+-++..|.++|++|.++.+....+
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            68999999999999999999999999999999887665433

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.98  E-value=0.003  Score=47.83  Aligned_cols=49  Identities=22%  Similarity=0.327  Sum_probs=41.3

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL   56 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~   56 (259)
                      ..+|+||+++|-|- |.+|..+++.|.+.|++|+.++.+....+....+.
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            45699999999985 58999999999999999999998877766655543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.95  E-value=0.006  Score=43.80  Aligned_cols=42  Identities=17%  Similarity=0.177  Sum_probs=37.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL   49 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~   49 (259)
                      -+++||+++|.|.|.-+|+-++..|.++|+.|.++......+
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l   76 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL   76 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence            368999999999999999999999999999999988765543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.92  E-value=0.019  Score=38.23  Aligned_cols=35  Identities=26%  Similarity=0.477  Sum_probs=30.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      .|+++|.||+ -+|.++|..|.+.|.+|.++.|...
T Consensus        22 p~~v~IiGgG-~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGGG-YIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECCC-ccceeeeeeecccccEEEEEEecce
Confidence            4788999875 9999999999999999999987654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.90  E-value=0.061  Score=35.45  Aligned_cols=70  Identities=17%  Similarity=0.219  Sum_probs=53.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ..++.|.|| |-+|+-++....+.|.++++++.+.+....        ...-.++..|..|.+.+.++....     .+|
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~--------~va~~~i~~~~~d~~~l~~~~~~~-----~~D   76 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM--------HVAHRSHVINMLDGDALRRVVELE-----KPH   76 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG--------GGSSEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh--------hcCCeEEECCCCCHHHHHHHHHhh-----CCc
Confidence            357999984 589999999999999999999987653111        111357889999999999988654     688


Q ss_pred             EEEE
Q 024976           92 ILVN   95 (259)
Q Consensus        92 ~li~   95 (259)
                      ++-+
T Consensus        77 viT~   80 (111)
T d1kjqa2          77 YIVP   80 (111)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            8864

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.89  E-value=0.0065  Score=41.48  Aligned_cols=71  Identities=14%  Similarity=0.192  Sum_probs=51.4

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      |.++|.|. +.+|+.+++.|  +|.+|++++.+++..+...    ..  .+.++.+|.++++.++++      ...+.+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a------~i~~A~~   65 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL----RS--GANFVHGDPTRVSDLEKA------NVRGARA   65 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----HT--TCEEEESCTTSHHHHHHT------TCTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----hc--CccccccccCCHHHHHHh------hhhcCcE
Confidence            46788875 68999999999  4667888888877655432    22  478899999999887764      1235778


Q ss_pred             EEECCC
Q 024976           93 LVNAAA   98 (259)
Q Consensus        93 li~~ag   98 (259)
                      +|....
T Consensus        66 vi~~~~   71 (129)
T d2fy8a1          66 VIVNLE   71 (129)
T ss_dssp             EEECCS
T ss_pred             EEEecc
Confidence            876554

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.0039  Score=51.85  Aligned_cols=35  Identities=26%  Similarity=0.411  Sum_probs=30.0

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR   45 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~   45 (259)
                      |++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            45668999998 5899999999999999 59999863

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.71  E-value=0.019  Score=38.73  Aligned_cols=34  Identities=24%  Similarity=0.431  Sum_probs=30.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .|+++|.||+ -||.++|..|.+.|.+|.++.++.
T Consensus        23 p~~~vIiG~G-~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGG-IIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECCC-chHHHHHHHHHhhCcceeEEEecc
Confidence            4788999875 899999999999999999998764

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.68  E-value=0.0062  Score=43.26  Aligned_cols=34  Identities=18%  Similarity=0.064  Sum_probs=30.9

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV   48 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~   48 (259)
                      +++|.|+ |.+|..++..|++.|++|.+++|+...
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            6889988 899999999999999999999998653

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.67  E-value=0.056  Score=38.92  Aligned_cols=45  Identities=16%  Similarity=0.161  Sum_probs=37.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA   55 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~   55 (259)
                      ...-.++|.||. -.|++.++-....|+.|.++|.+.+.++++...
T Consensus        27 V~pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          27 VPPARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             ECCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred             cCCcEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            345688999875 789999999999999999999998887776544

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.65  E-value=0.03  Score=37.63  Aligned_cols=36  Identities=22%  Similarity=0.453  Sum_probs=30.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      .+|+++|.||+ .+|.++|..|.++|.+|.++.+...
T Consensus        29 ~~~~vvIIGgG-~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGGG-VIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECcc-hhHHHHHHHhhcccceEEEEeeccc
Confidence            35788888865 9999999999999999999987643

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.56  E-value=0.013  Score=43.11  Aligned_cols=72  Identities=18%  Similarity=0.172  Sum_probs=54.4

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++||+||=.|+++|+   ++..++..|+ +|+.++.++..++...+.+    .++.++.+|+.+.             
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~----~~~~~~~~D~~~l-------------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC----GGVNFMVADVSEI-------------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC----TTSEEEECCGGGC-------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc----ccccEEEEehhhc-------------
Confidence            46899999999999883   3445777887 5999999887666554433    3588999998632             


Q ss_pred             cCCccEEEECCCC
Q 024976           87 FGKLDILVNAAAG   99 (259)
Q Consensus        87 ~g~id~li~~ag~   99 (259)
                      .+++|+||.|+.+
T Consensus       105 ~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 SGKYDTWIMNPPF  117 (197)
T ss_dssp             CCCEEEEEECCCC
T ss_pred             CCcceEEEeCccc
Confidence            2689999999875

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.54  E-value=0.027  Score=37.92  Aligned_cols=35  Identities=20%  Similarity=0.360  Sum_probs=30.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ++|+++|.||+ .+|.++|..|++.|.+|.++.+..
T Consensus        29 ~~k~vvViGgG-~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGSG-YIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECCh-HHHHHHHHHhhccceEEEEEEecC
Confidence            46788888765 999999999999999999997764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.52  E-value=0.056  Score=38.14  Aligned_cols=84  Identities=12%  Similarity=0.078  Sum_probs=53.0

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH-------hcCCCeEEEEcCCCCHHHHHHHHHH---H
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-------SLGIPAIGLEGDVRKREDAVRVVES---T   83 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~-------~~~~~v~~~~~Dl~~~~~~~~~~~~---~   83 (259)
                      ++.|.| .|-+|.++|++|.++|++|.+.+|+.++.+.+.+.-.       +......++..-+.+...++.++..   +
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            466664 5799999999999999999999999877665543211       0011233555556777777766543   2


Q ss_pred             HHHcCCccEEEECCC
Q 024976           84 INHFGKLDILVNAAA   98 (259)
Q Consensus        84 ~~~~g~id~li~~ag   98 (259)
                      .....+=+++|.+.-
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            333223345665555

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.51  E-value=0.024  Score=37.84  Aligned_cols=34  Identities=24%  Similarity=0.280  Sum_probs=29.9

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .|+++|.||+ -+|.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGgG-~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGSG-YIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECCc-hHHHHHHHHHHhccccceeeehhc
Confidence            5788888875 999999999999999999998753

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.031  Score=37.71  Aligned_cols=34  Identities=24%  Similarity=0.340  Sum_probs=30.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .|+++|.||+ -||.++|..|.+.|.+|.++.|..
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            4788999876 799999999999999999998863

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.45  E-value=0.023  Score=37.80  Aligned_cols=34  Identities=21%  Similarity=0.259  Sum_probs=29.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .|+++|.||+ -+|.++|..|.+.|.+|.++.|..
T Consensus        21 p~~vvIiGgG-~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAG-YIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECCC-hhhHHHHHHhhccccEEEEEeecc
Confidence            3678888765 999999999999999999998864

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.42  E-value=0.062  Score=38.42  Aligned_cols=82  Identities=20%  Similarity=0.162  Sum_probs=52.4

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC------------------CCeEEEEcCCCCHHHH
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG------------------IPAIGLEGDVRKREDA   76 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~------------------~~v~~~~~Dl~~~~~~   76 (259)
                      +-|. |.|-+|.+++++|+++|++|.+.+|++++.+++.++-....                  .....+..-+.....+
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            4455 46799999999999999999999999998887766532110                  1112333334445555


Q ss_pred             HHHHHHHHHHcCCccEEEECC
Q 024976           77 VRVVESTINHFGKLDILVNAA   97 (259)
Q Consensus        77 ~~~~~~~~~~~g~id~li~~a   97 (259)
                      ...+......+.+=++++...
T Consensus        83 ~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhhccccceecccC
Confidence            555555555544444555544

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.35  E-value=0.034  Score=37.14  Aligned_cols=35  Identities=20%  Similarity=0.309  Sum_probs=29.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ..++++|.||+ -||.++|..|++.|.+|.++.+..
T Consensus        21 ~p~~i~IiG~G-~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAG-VIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECCC-hHHHHHHHHHHHcCCceEEEEeec
Confidence            34788999875 999999999999999999987653

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.33  E-value=0.014  Score=44.16  Aligned_cols=37  Identities=27%  Similarity=0.478  Sum_probs=31.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      +-..|+|+|+||+ -.|..+|..|+++|++|.+++|+.
T Consensus         3 ~~~~~kVvVIGaG-iaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           3 MHSQKRVVVLGSG-VIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCcEEEECcc-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3456789999875 889999999999999999999863

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.25  E-value=0.021  Score=40.95  Aligned_cols=79  Identities=13%  Similarity=0.140  Sum_probs=53.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeE---EEEcCC--CCHHHHHHHHHH
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI---GLEGDV--RKREDAVRVVES   82 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~---~~~~Dl--~~~~~~~~~~~~   82 (259)
                      .+++||.++|.|-|.-+|+-++..|.++|+.|..+..+.....       ..+..+.   ....|+  -..+.+++... 
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~lk~~~~-   96 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF-------TRGESLKLNKHHVEDLGEYSEDLLKKCSL-   96 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE-------ESCCCSSCCCCEEEEEEECCHHHHHHHHH-
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccc-------ccccceeeeeeccccccccchhHHhhccc-
Confidence            4799999999999999999999999999999998876532100       0011111   111122  33555666554 


Q ss_pred             HHHHcCCccEEEECCCCC
Q 024976           83 TINHFGKLDILVNAAAGN  100 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~  100 (259)
                            ..|++|...|..
T Consensus        97 ------~aDIvIsavG~p  108 (171)
T d1edza1          97 ------DSDVVITGVPSE  108 (171)
T ss_dssp             ------HCSEEEECCCCT
T ss_pred             ------cCCEEEEccCCC
Confidence                  379999999853

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.22  E-value=0.075  Score=40.53  Aligned_cols=73  Identities=29%  Similarity=0.357  Sum_probs=56.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ..|+++|=.|+++|+   ++..+++.|++|+.+|.++...+.+.+.....+.++.++..|+.+      .     -..++
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~-----~~~~~  184 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------A-----LPFGP  184 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------H-----GGGCC
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------c-----ccccc
Confidence            568899999999986   334567889999999999999988888777667677888777521      1     12368


Q ss_pred             ccEEEEC
Q 024976           90 LDILVNA   96 (259)
Q Consensus        90 id~li~~   96 (259)
                      +|+++.|
T Consensus       185 fD~V~an  191 (254)
T d2nxca1         185 FDLLVAN  191 (254)
T ss_dssp             EEEEEEE
T ss_pred             cchhhhc
Confidence            9999987

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.20  E-value=0.075  Score=33.96  Aligned_cols=73  Identities=21%  Similarity=0.185  Sum_probs=47.3

Q ss_pred             CCCCcEEEEeCCccchH-HHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIG-FEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG-~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +-+.|++-+.|-+ |+| .++|+.|.++|+.|...|+.....-   +.+.+.+.  .+...+-.+             ..
T Consensus         5 ~~~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~Gi--~v~~g~~~~-------------~i   65 (96)
T d1p3da1           5 MRRVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAGA--KIYIGHAEE-------------HI   65 (96)
T ss_dssp             CTTCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTTC--EEEESCCGG-------------GG
T ss_pred             chhCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCCC--eEEECCccc-------------cC
Confidence            3456788888765 667 4569999999999999998754322   33334443  333322221             11


Q ss_pred             CCccEEEECCCCC
Q 024976           88 GKLDILVNAAAGN  100 (259)
Q Consensus        88 g~id~li~~ag~~  100 (259)
                      ...|.+|...++.
T Consensus        66 ~~~d~vV~S~AI~   78 (96)
T d1p3da1          66 EGASVVVVSSAIK   78 (96)
T ss_dssp             TTCSEEEECTTSC
T ss_pred             CCCCEEEECCCcC
Confidence            3689999999963

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.15  E-value=0.038  Score=41.71  Aligned_cols=74  Identities=19%  Similarity=0.169  Sum_probs=59.0

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +++++|=.|++.|   ..+..|+++|++|+.++.++..++.+.+.+...+.++.++..|+.+..-           -+.+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------cccc
Confidence            4678999999877   4566789999999999999998888888887777789999999875321           1468


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      |.+++.-+
T Consensus       107 D~I~~~~~  114 (251)
T d1wzna1         107 DAVTMFFS  114 (251)
T ss_dssp             EEEEECSS
T ss_pred             chHhhhhh
Confidence            98887644

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.14  E-value=0.03  Score=40.90  Aligned_cols=82  Identities=17%  Similarity=0.090  Sum_probs=62.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +..+=+|-|+||...++.+.+ . +.+|+.+|++++.++...+.+...+.++.+++.+.++...+..-.     ..+++|
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~-----~~~~vd   97 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTL-----GIEKVD   97 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHT-----TCSCEE
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHc-----CCCCcc
Confidence            345556777788877777766 3 468999999999999988888887888999999998765432211     135899


Q ss_pred             EEEECCCCC
Q 024976           92 ILVNAAAGN  100 (259)
Q Consensus        92 ~li~~ag~~  100 (259)
                      +++.--|+.
T Consensus        98 gIl~DlGvS  106 (192)
T d1m6ya2          98 GILMDLGVS  106 (192)
T ss_dssp             EEEEECSCC
T ss_pred             eeeeccchh
Confidence            999999964

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.13  E-value=0.055  Score=36.68  Aligned_cols=73  Identities=14%  Similarity=0.124  Sum_probs=55.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEE-EEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIA-IMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI   92 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv-~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   92 (259)
                      ++.|.|++|-.|+++++.+.++|++++ .++++...      .+.  ..+   +..|+|.++.+.+.++.+.+.  ++-+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~~--~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~   68 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------ELD--SPD---VVIDFSSPEALPKTVDLCKKY--RAGL   68 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------ECS--CCS---EEEECSCGGGHHHHHHHHHHH--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hhc--cCC---EEEEecCHHHHHHHHHHHHhc--CCCE
Confidence            589999999999999999999999866 45654321      011  122   567999999999999988776  5668


Q ss_pred             EEECCCC
Q 024976           93 LVNAAAG   99 (259)
Q Consensus        93 li~~ag~   99 (259)
                      |+-..|+
T Consensus        69 ViGTTG~   75 (128)
T d1vm6a3          69 VLGTTAL   75 (128)
T ss_dssp             EECCCSC
T ss_pred             EEEcCCC
Confidence            8888884

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.05  E-value=0.034  Score=37.36  Aligned_cols=33  Identities=21%  Similarity=0.267  Sum_probs=28.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      .+.++|.||+ -||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGgG-~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGAS-YVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECCS-HHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECCC-ccHHHHHHHHhhcCCeEEEEEec
Confidence            4678888865 99999999999999999998765

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.03  E-value=0.039  Score=36.52  Aligned_cols=34  Identities=29%  Similarity=0.595  Sum_probs=29.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      +|+++|.||+ .+|.++|..|.+.|.+|.++.+.+
T Consensus        21 p~~vvIiGgG-~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGG-YIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECCC-HHHHHHHHHHhhcccceEEEeeec
Confidence            4788888764 999999999999999999997753

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.03  E-value=0.13  Score=35.29  Aligned_cols=86  Identities=12%  Similarity=0.017  Sum_probs=57.5

Q ss_pred             CCcEEEEeCCc---cchHHHHHHHHHHcCCeEEEEeCChhhHHH--HHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGG---SGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        11 ~~k~~lItGa~---~giG~~~a~~l~~~G~~vv~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +.|++.|+|+|   +..|..+.+.|.+.|++|+.+..+......  ....+.+....+..+.. +...+.+.++++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence            46899999999   679999999999999999998765332110  11112222222222211 3457788888888876


Q ss_pred             HcCCccEEEECCCC
Q 024976           86 HFGKLDILVNAAAG   99 (259)
Q Consensus        86 ~~g~id~li~~ag~   99 (259)
                      .  ++..++...|.
T Consensus        97 ~--g~k~v~~~~G~  108 (139)
T d2d59a1          97 K--GAKVVWFQYNT  108 (139)
T ss_dssp             H--TCSEEEECTTC
T ss_pred             h--CCCEEEEeccc
Confidence            5  47788888885

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.93  E-value=0.051  Score=36.48  Aligned_cols=34  Identities=24%  Similarity=0.441  Sum_probs=30.0

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .|.++|.||+ -||.++|..|.+.|.+|.++.|..
T Consensus        25 p~~~viiG~G-~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGAG-YIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCCS-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEccc-hHHHHHHHHHHhcCCeEEEEEEcc
Confidence            4788888875 999999999999999999998764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.92  E-value=0.029  Score=39.23  Aligned_cols=42  Identities=21%  Similarity=0.212  Sum_probs=34.9

Q ss_pred             EEEEeCCccchHHHHHHHHHHcC-CeEEEEeCChhhHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAAL   56 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~   56 (259)
                      ++.+.|+ |-+|.++++.|.+.| .+|++.+|+.++.+.+.++.
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            4677776 799999999999888 78999999988877766653

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.86  E-value=0.035  Score=39.98  Aligned_cols=77  Identities=13%  Similarity=0.002  Sum_probs=55.8

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-------------CCCeEEEEcCCCCHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-------------GIPAIGLEGDVRKREDA   76 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-------------~~~v~~~~~Dl~~~~~~   76 (259)
                      -.|++||..|++.|   ..+..|+++|++|+.+|.++..++...+..+..             +..+.++.+|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            36789999999877   367799999999999999999888877766432             23456788888764432


Q ss_pred             HHHHHHHHHHcCCccEEEECCC
Q 024976           77 VRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        77 ~~~~~~~~~~~g~id~li~~ag   98 (259)
                      ..         ..+|.++....
T Consensus        96 ~~---------~~~D~i~~~~~  108 (201)
T d1pjza_          96 DI---------GHCAAFYDRAA  108 (201)
T ss_dssp             HH---------HSEEEEEEESC
T ss_pred             cc---------cceeEEEEEee
Confidence            21         25777766544

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.78  E-value=0.029  Score=42.47  Aligned_cols=75  Identities=16%  Similarity=0.068  Sum_probs=60.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ..++++|=.|++.|.   ++..|+++|.+|+.+|.+++.++.+.+.....+.++.++..|+.+.+           ..++
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~~  101 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INRK  101 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSCC
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------cccc
Confidence            567899999999885   78889999999999999999888888777777778999999987532           1247


Q ss_pred             ccEEEECCC
Q 024976           90 LDILVNAAA   98 (259)
Q Consensus        90 id~li~~ag   98 (259)
                      +|++++..+
T Consensus       102 fD~i~~~~~  110 (246)
T d1y8ca_         102 FDLITCCLD  110 (246)
T ss_dssp             EEEEEECTT
T ss_pred             ccccceeee
Confidence            999987544

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.75  E-value=0.041  Score=36.86  Aligned_cols=34  Identities=29%  Similarity=0.532  Sum_probs=29.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      +|.++|.||+ .+|.++|..|.+.|.+|.++.+.+
T Consensus        32 ~~~vvIiGgG-~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGGG-FIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEECS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECCc-HHHHHHHHHhhcccceEEEEeccc
Confidence            3678888765 999999999999999999998764

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.68  E-value=0.045  Score=38.67  Aligned_cols=39  Identities=28%  Similarity=0.395  Sum_probs=34.8

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      ..|.||+++|.|=. -||+.+|+.|...|++|++++.++.
T Consensus        20 ~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~   58 (163)
T d1li4a1          20 VMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPI   58 (163)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             ceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccc
Confidence            35889999999854 8999999999999999999998864

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.67  E-value=0.094  Score=34.74  Aligned_cols=36  Identities=17%  Similarity=0.307  Sum_probs=31.3

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ..+|.++|.||+ -||.++|..|++.|.+|.++.|.+
T Consensus        20 ~~~~~vvVvGgG-~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGGS-KTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHhcchhheEeeccc
Confidence            457899988865 999999999999999999998764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.62  E-value=0.068  Score=36.53  Aligned_cols=76  Identities=11%  Similarity=0.096  Sum_probs=54.2

Q ss_pred             EEEEeCCccchHHHHHHHHHHc-CCeEE-EEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           14 VALLTGGGSGIGFEISLQLGKH-GAAIA-IMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~-G~~vv-~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ++.|.|++|-.|+++++.+.+. +++++ .+++... +.    .+...+.+   +..|+|.++.+.+.++.+.+.  ++-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~----~~~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LS----LLTDGNTE---VVIDFTHPDVVMGNLEFLIDN--GIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-TH----HHHTTTCS---EEEECCCTTTHHHHHHHHHHT--TCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hh----hhccccCC---EEEEcccHHHHHHHHHHHHhc--CCC
Confidence            5789999999999999987764 66755 4555432 21    12222222   567999999999999888765  566


Q ss_pred             EEEECCCC
Q 024976           92 ILVNAAAG   99 (259)
Q Consensus        92 ~li~~ag~   99 (259)
                      +|+-..|+
T Consensus        71 ~ViGTTG~   78 (135)
T d1yl7a1          71 AVVGTTGF   78 (135)
T ss_dssp             EEECCCCC
T ss_pred             EEEecccc
Confidence            88888884

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.59  E-value=0.36  Score=37.85  Aligned_cols=83  Identities=18%  Similarity=0.124  Sum_probs=57.6

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+|++||=.++..| |.++  +++..|.+|+.++.+...++.+.+.+...+ .++.+++.|..+..      +...+..+
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~------~~~~~~~~  214 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLL------RRLEKEGE  214 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHH------HHHHHTTC
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHh------hhhHhhhc
Confidence            57888887766644 2332  345556789999999999888888877655 35888988875432      22333345


Q ss_pred             CccEEEECCCCCC
Q 024976           89 KLDILVNAAAGNF  101 (259)
Q Consensus        89 ~id~li~~ag~~~  101 (259)
                      ++|.||.++..+.
T Consensus       215 ~fD~Vi~DpP~~~  227 (318)
T d1wxxa2         215 RFDLVVLDPPAFA  227 (318)
T ss_dssp             CEEEEEECCCCSC
T ss_pred             CCCEEEEcCCccc
Confidence            8999999987544

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.59  E-value=0.077  Score=36.96  Aligned_cols=35  Identities=14%  Similarity=0.216  Sum_probs=28.7

Q ss_pred             CcEEEEe-CCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           12 GKVALLT-GGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lIt-Ga~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ++.++|. .+++-||.++|..|+++|++|.++.+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4555554 5668999999999999999999998764

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.55  E-value=0.029  Score=40.68  Aligned_cols=42  Identities=19%  Similarity=0.231  Sum_probs=36.0

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV   48 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~   48 (259)
                      ....+.+|++.|.| .|.||+++++.+...|.+|+..++....
T Consensus        38 ~~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          38 SGTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CBCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            34568999999998 4699999999999999999999987554

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.49  E-value=0.096  Score=38.85  Aligned_cols=78  Identities=19%  Similarity=0.190  Sum_probs=61.0

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      -+|.+||.+|+++|--.++..+++  |.+|+.+.++++-.+...+.+.+.+ .++.++..|..+-          ....+
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~  144 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKA  144 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGC
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccC
Confidence            356799999999998888888877  5679999999887777777777665 5799999998631          12236


Q ss_pred             CccEEEECCCC
Q 024976           89 KLDILVNAAAG   99 (259)
Q Consensus        89 ~id~li~~ag~   99 (259)
                      ++|.++.+++.
T Consensus       145 pfD~Iiv~~a~  155 (215)
T d1jg1a_         145 PYDVIIVTAGA  155 (215)
T ss_dssp             CEEEEEECSBB
T ss_pred             cceeEEeeccc
Confidence            89999988885

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.47  E-value=0.16  Score=37.73  Aligned_cols=59  Identities=5%  Similarity=-0.093  Sum_probs=45.0

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh------------------cCCCeEEEEcCCCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS------------------LGIPAIGLEGDVRK   72 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~------------------~~~~v~~~~~Dl~~   72 (259)
                      .+++||..|++.|   ..+..|+++|++|+.+|-++...+.+.+....                  .+.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            6789999999887   45888999999999999998887776665431                  13457777777643

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.34  E-value=0.53  Score=33.11  Aligned_cols=76  Identities=17%  Similarity=0.125  Sum_probs=44.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHc-----CCeEEEEeCChhhHHHHHHHHHh----cCCCeEEEEcCCCCHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKH-----GAAIAIMGRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~-----G~~vv~~~r~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      ..++.|.||++.....+...++..     +.+++++|.++++++...+.+..    .+....+...  +|.++       
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~e-------   73 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPEE-------   73 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHHH-------
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChhh-------
Confidence            346788888664333344444432     23799999999887755444432    2333333322  12211       


Q ss_pred             HHHHcCCccEEEECCCC
Q 024976           83 TINHFGKLDILVNAAAG   99 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~   99 (259)
                         .+..-|+||..+|.
T Consensus        74 ---al~~AD~Vvitag~   87 (167)
T d1u8xx1          74 ---AFTDVDFVMAHIRV   87 (167)
T ss_dssp             ---HHSSCSEEEECCCT
T ss_pred             ---ccCCCCEEEECCCc
Confidence               22368999999995

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.30  E-value=0.028  Score=40.99  Aligned_cols=41  Identities=17%  Similarity=0.307  Sum_probs=33.8

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA   54 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~   54 (259)
                      +++.|.|++ ..|.++|..|++.|++|.+.+|+++..+.+.+
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            368888876 68999999999999999999999776655443

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.30  E-value=0.12  Score=37.93  Aligned_cols=75  Identities=19%  Similarity=0.078  Sum_probs=58.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      +.+||=.|++.|.   ++..|++.|++|+.+|.+...++.+.+.+...+..+.++..|..+...          ..+.+|
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~----------~~~~fD  104 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF----------EDKTFD  104 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS----------CTTCEE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccc----------cCcCce
Confidence            4578999998886   667889999999999999988888888777777778888888876321          114799


Q ss_pred             EEEECCCC
Q 024976           92 ILVNAAAG   99 (259)
Q Consensus        92 ~li~~ag~   99 (259)
                      +|+....+
T Consensus       105 ~I~~~~~l  112 (226)
T d1ve3a1         105 YVIFIDSI  112 (226)
T ss_dssp             EEEEESCG
T ss_pred             EEEEecch
Confidence            99887653

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.21  E-value=0.21  Score=35.82  Aligned_cols=75  Identities=23%  Similarity=0.352  Sum_probs=55.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC--CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +|.++|=.|+++|   .++..|++.+.+|+.++.+++.++.+.+.++..+  .++.++++|..+          ......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            5778888888877   3455677778899999999999998888887664  578999988421          122335


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            7999988754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.15  E-value=0.044  Score=39.54  Aligned_cols=37  Identities=14%  Similarity=0.368  Sum_probs=32.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ..++|+++|+||+ .-|.+.|..|+++|++|.++.+..
T Consensus        40 ~~~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAG-PAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECcc-HHHHHHHHHHHhhccceEEEeccC
Confidence            4567999999876 889999999999999999998864

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.10  E-value=0.024  Score=40.99  Aligned_cols=34  Identities=21%  Similarity=0.323  Sum_probs=29.6

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~~   46 (259)
                      +|+|+|+||+ ..|..+|..|+++|++ |.++.+..
T Consensus         4 ~~kVaIIGaG-paGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAG-PASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCS-HHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECCh-HHHHHHHHHHHHCCCCeEEEEEecC
Confidence            6889999875 8999999999999995 98988754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.06  E-value=0.063  Score=36.14  Aligned_cols=33  Identities=24%  Similarity=0.414  Sum_probs=29.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      .+.++|.||+ -||.++|..|.+.|.+|.++.+.
T Consensus        26 p~~vvIiGgG-~IG~E~A~~~~~~G~~Vtive~~   58 (125)
T d1ojta2          26 PGKLLIIGGG-IIGLEMGTVYSTLGSRLDVVEMM   58 (125)
T ss_dssp             CSEEEEESCS-HHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCeEEEECCC-HHHHHHHHHhhcCCCEEEEEEee
Confidence            4788999875 99999999999999999999764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.97  E-value=0.065  Score=38.63  Aligned_cols=39  Identities=23%  Similarity=0.371  Sum_probs=34.7

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      ..+.||++.|.|.+ .||+.+++.+...|++|+.+++...
T Consensus        38 ~~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          38 PLIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CcccCceEEEeccc-cccccceeeeecccccccccccccc
Confidence            45899999999976 5999999999999999999998753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.95  E-value=0.093  Score=35.63  Aligned_cols=35  Identities=20%  Similarity=0.374  Sum_probs=30.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .+|+++|.||+ -+|.++|..|.+.|.+|.++.+..
T Consensus        34 ~~k~v~VIGgG-~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGGG-YIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECCc-hHHHHHHHHHHhhCcceeeeeecc
Confidence            46889999765 999999999999999999998754

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.85  E-value=0.031  Score=42.96  Aligned_cols=34  Identities=21%  Similarity=0.384  Sum_probs=29.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      +|+|+|+||+ --|..+|..|+++|++|.++.++.
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5889999876 678999999999999999997653

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.82  E-value=0.38  Score=37.79  Aligned_cols=82  Identities=16%  Similarity=0.086  Sum_probs=54.9

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcC--CCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .|+++|=.++..|.   ++..+++.|+ +|+.++.++..++...+.+...+  .++.++..|+.+      .........
T Consensus       145 ~g~~VLDl~~g~G~---~si~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~~  215 (324)
T d2as0a2         145 PGDRVLDVFTYTGG---FAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKKG  215 (324)
T ss_dssp             TTCEEEETTCTTTH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHTT
T ss_pred             CCCeeecccCcccc---hhhhhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhcc
Confidence            37788877665432   2234456787 69999999998888877776544  367888887652      223333334


Q ss_pred             CCccEEEECCCCCC
Q 024976           88 GKLDILVNAAAGNF  101 (259)
Q Consensus        88 g~id~li~~ag~~~  101 (259)
                      .++|.||.++..+.
T Consensus       216 ~~fD~Vi~DpP~~~  229 (324)
T d2as0a2         216 EKFDIVVLDPPAFV  229 (324)
T ss_dssp             CCEEEEEECCCCSC
T ss_pred             CCCCchhcCCcccc
Confidence            58999999987543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.79  E-value=0.062  Score=39.35  Aligned_cols=41  Identities=17%  Similarity=0.195  Sum_probs=35.6

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      ....+.||++.|.|- |.||+.+++.|...|++|+..++...
T Consensus        37 ~g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          37 IGREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CBCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cCccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            346789999999985 59999999999999999999987654

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=93.79  E-value=0.29  Score=37.49  Aligned_cols=78  Identities=14%  Similarity=0.147  Sum_probs=54.1

Q ss_pred             cEEEEeCCccch-HHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC--CCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           13 KVALLTGGGSGI-GFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        13 k~~lItGa~~gi-G~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++++-.|+++|+ +.+++ +  ...++|+.+|.+++.++-+.+.....+  .++.+...|+.+.         ..+.+++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            456656666554 44433 2  356789999999998888887776543  4677888888743         2233478


Q ss_pred             ccEEEECCCCCCC
Q 024976           90 LDILVNAAAGNFL  102 (259)
Q Consensus        90 id~li~~ag~~~~  102 (259)
                      +|++|.|+-+...
T Consensus       180 fDlIVsNPPYI~~  192 (271)
T d1nv8a_         180 IEMILSNPPYVKS  192 (271)
T ss_dssp             CCEEEECCCCBCG
T ss_pred             ccEEEEcccccCc
Confidence            9999999997643

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.77  E-value=0.15  Score=39.88  Aligned_cols=76  Identities=24%  Similarity=0.342  Sum_probs=53.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHh--cCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .++||+||-.|++.|+   ++..+++.|+ +|+.++.++.. ....+....  ...++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            3689999999999886   5677888998 58899887653 333443332  34578999999886431          


Q ss_pred             HcCCccEEEECCC
Q 024976           86 HFGKLDILVNAAA   98 (259)
Q Consensus        86 ~~g~id~li~~ag   98 (259)
                      ...++|+++...-
T Consensus        99 ~~~~~D~Ivse~~  111 (311)
T d2fyta1          99 PVEKVDVIISEWM  111 (311)
T ss_dssp             SCSCEEEEEECCC
T ss_pred             ccccceEEEEeee
Confidence            1147999987543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.73  E-value=1.1  Score=34.79  Aligned_cols=81  Identities=16%  Similarity=0.037  Sum_probs=54.5

Q ss_pred             CCcEEEEeCCc-cchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcC---CCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGG-SGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        11 ~~k~~lItGa~-~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      +|+++|=..+. |+++    .+.+..|+ +|+.++.+...++...+.+...+   .++.+++.|+-      ++++...+
T Consensus       144 ~g~~VLdlf~~~G~~s----l~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFS----VAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHH----HHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHH----HHHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            57788766554 4433    34556788 59999999888888777765332   46889998874      33333444


Q ss_pred             HcCCccEEEECCCCCC
Q 024976           86 HFGKLDILVNAAAGNF  101 (259)
Q Consensus        86 ~~g~id~li~~ag~~~  101 (259)
                      ...++|++|..+..+.
T Consensus       214 ~~~~fD~Ii~DPP~f~  229 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFA  229 (317)
T ss_dssp             TTCCEEEEEECCCCC-
T ss_pred             hcCCCCEEEEcChhhc
Confidence            4458999999987543

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=93.71  E-value=0.82  Score=33.02  Aligned_cols=144  Identities=14%  Similarity=0.094  Sum_probs=77.6

Q ss_pred             CCCCcEEEEeCC--ccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus         9 ~l~~k~~lItGa--~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ...+++++|...  ......+++..|.+.|..++.+..+..                       .+.+.+..    ....
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~~l~~----~~~~   74 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRDELAE----RLRS   74 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHHHHHH----HHTT
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHHHHHH----Hhhc
Confidence            345666666533  344777788888888888776643321                       12222222    2334


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCHHHHHHHHhccchhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 024976           87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  166 (259)
Q Consensus        87 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  166 (259)
                      .+.++.||+..+......-. .      ......+...+.++|++..    ...       ..++.+++....... ..-
T Consensus        75 ~~~~~~vv~l~~~~~~~~~~-~------~~~~~~~~~~l~l~qal~~----~~~-------~~~l~~vT~~a~~~~-~~d  135 (209)
T d2fr1a2          75 VGEVAGVLSLLAVDEAEPEE-A------PLALASLADTLSLVQAMVS----AEL-------GCPLWTVTESAVATG-PFE  135 (209)
T ss_dssp             SCCCSEEEECTTTTCCCCSS-C------GGGCHHHHHHHHHHHHHHH----TTC-------CCCEEEEEESCSCSS-TTS
T ss_pred             cCCCCeEEEeCCCCCCCCcc-h------hHHHHHHHHHHHHHHHHHh----CCC-------CCcEEEEEcCCcccC-CCc
Confidence            46789999987753222111 1      1111224555666666542    221       144555544322221 111


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 024976          167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  199 (259)
Q Consensus       167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~i~  199 (259)
                      ..-+...+++-+|.|.++.|+. ...+++..+-
T Consensus       136 ~~~~p~~A~l~Gl~r~~~~E~P-~l~~~~vDl~  167 (209)
T d2fr1a2         136 RVRNAAHGALWGVGRVIALENP-AVWGGLVDVP  167 (209)
T ss_dssp             CCSCGGGHHHHHHHHHHHHHCG-GGEEEEEEEC
T ss_pred             ccCCHhHHhHHHHHHHHHHhCC-CceEEEEECC
Confidence            2234568889999999999997 5445555553

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.69  E-value=0.4  Score=33.01  Aligned_cols=78  Identities=13%  Similarity=0.151  Sum_probs=54.8

Q ss_pred             CCCCcEEEEeCCccc-hHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcC--CCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTGGGSG-IGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         9 ~l~~k~~lItGa~~g-iG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .++|+++|=.|+++| +|.    ..+.+|+ +|+.++.+.+..+.+.+.+...+  .++.+++.|..+      +++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            478888887766655 443    4567888 69999999888887777776553  458899888542      222   


Q ss_pred             HHcCCccEEEECCCC
Q 024976           85 NHFGKLDILVNAAAG   99 (259)
Q Consensus        85 ~~~g~id~li~~ag~   99 (259)
                      ...+++|+++..+.+
T Consensus        79 ~~~~~fDiIf~DPPy   93 (152)
T d2esra1          79 CLTGRFDLVFLDPPY   93 (152)
T ss_dssp             HBCSCEEEEEECCSS
T ss_pred             ccccccceeEechhh
Confidence            223579999988753

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.63  E-value=0.019  Score=48.85  Aligned_cols=34  Identities=24%  Similarity=0.272  Sum_probs=29.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGR   44 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r   44 (259)
                      |++.+|+|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            55678999987 6999999999999998 5888876

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.56  E-value=0.06  Score=37.54  Aligned_cols=42  Identities=14%  Similarity=0.077  Sum_probs=34.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL   56 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~   56 (259)
                      ++.|. |+|-+|.++++.|.+.|+++++.+|+.++.+++.++.
T Consensus         2 kIg~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           2 KIGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            35566 4669999999999999999999999988877766655

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.54  E-value=0.19  Score=36.24  Aligned_cols=40  Identities=13%  Similarity=0.124  Sum_probs=34.9

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      ...+.++++.|.|. |.||+++++.|...|.+|+..++...
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccc
Confidence            45689999999985 58999999999999999999998644

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.49  E-value=0.22  Score=36.62  Aligned_cols=79  Identities=19%  Similarity=0.247  Sum_probs=58.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .|.+||-.|+++|--.++..++...+.+|+.++.+++..+...+.+...+ .++.++..|..+.          ....++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~----------~~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG----------VPEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc----------cccccc
Confidence            56799999999887777666666666689999999998888888887653 3577777776531          112257


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|.++.+++.
T Consensus       145 fD~I~~~~~~  154 (213)
T d1dl5a1         145 YDVIFVTVGV  154 (213)
T ss_dssp             EEEEEECSBB
T ss_pred             hhhhhhhccH
Confidence            9999988874

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.48  E-value=0.056  Score=39.67  Aligned_cols=41  Identities=20%  Similarity=0.156  Sum_probs=35.5

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      ....+.||++.|.|.+ .||+.+++.|...|++|+..++...
T Consensus        39 ~~~~l~~ktvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          39 IGKELGQQTVGVMGTG-HIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCCCGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccccceeeeeeecc-cccccccccccccceeeeccCCccc
Confidence            3467899999999865 8999999999999999999988644

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.40  E-value=0.58  Score=30.66  Aligned_cols=84  Identities=12%  Similarity=0.067  Sum_probs=52.3

Q ss_pred             cEEEEeCCc---cchHHHHHHHHHHcCCeEEEEeCChhhHHH--HHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           13 KVALLTGGG---SGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        13 k~~lItGa~---~giG~~~a~~l~~~G~~vv~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      |++.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+....  ..+.+.+....+..+.. ....+.+.++++++.+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi-~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF-VVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE-CSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE-EeCHHHHHHHHHHHHhc-
Confidence            689999999   568999999999999999888654322110  11112222222222111 34567777777777654 


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                       ++..++...|.
T Consensus        80 -g~k~v~~~~g~   90 (116)
T d1y81a1          80 -GFKKLWFQPGA   90 (116)
T ss_dssp             -TCCEEEECTTS
T ss_pred             -CCceEEeccch
Confidence             46677776664

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.40  E-value=0.07  Score=41.54  Aligned_cols=23  Identities=13%  Similarity=0.078  Sum_probs=20.6

Q ss_pred             cchHHHHHHHHHHcCCeEEEEeC
Q 024976           22 SGIGFEISLQLGKHGAAIAIMGR   44 (259)
Q Consensus        22 ~giG~~~a~~l~~~G~~vv~~~r   44 (259)
                      |..|.++|+.|..+|++|+++.+
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHcCCEEEEEec
Confidence            67899999999999999998854

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.37  E-value=0.59  Score=30.58  Aligned_cols=82  Identities=15%  Similarity=0.164  Sum_probs=56.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ||++||.--..-+...+...|.+.|++|+....+..   +..+.+.+...++.++-.++-+.+ --++++++++....+-
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~---~al~~~~~~~~dliilD~~mp~~~-G~e~~~~ir~~~~~~p   76 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGR---EAVEKYKELKPDIVTMDITMPEMN-GIDAIKEIMKIDPNAK   76 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHHCCSEEEEECSCGGGC-HHHHHHHHHHHCTTCC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHH---HHHHHHHhccCCEEEEecCCCCCC-HHHHHHHHHHhCCCCc
Confidence            789999999999999999999999999886655533   333334444455666655555543 3456666776666676


Q ss_pred             EEEECC
Q 024976           92 ILVNAA   97 (259)
Q Consensus        92 ~li~~a   97 (259)
                      +++..+
T Consensus        77 vi~ls~   82 (118)
T d1u0sy_          77 IIVCSA   82 (118)
T ss_dssp             EEEEEC
T ss_pred             EEEEEc
Confidence            666653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.33  E-value=0.073  Score=38.80  Aligned_cols=40  Identities=13%  Similarity=0.225  Sum_probs=35.2

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      ...+.||++.|.|. |.||+.+++.+...|++|+..++...
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            46699999999975 59999999999999999999988654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.86  E-value=0.07  Score=40.22  Aligned_cols=34  Identities=21%  Similarity=0.337  Sum_probs=29.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .++|+|+||+ --|..+|..|+++|++|+++.++.
T Consensus         4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4678999876 779999999999999999998764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=92.83  E-value=0.16  Score=36.81  Aligned_cols=42  Identities=19%  Similarity=0.253  Sum_probs=35.8

Q ss_pred             CCCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhh
Q 024976            6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV   48 (259)
Q Consensus         6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~   48 (259)
                      ....+.||++.|.|.+ .||+.+++.+...|.+|+..++....
T Consensus        41 ~~~~l~g~tvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          41 VGEKLDNKTLGIYGFG-SIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CBCCCTTCEEEEECCS-HHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             ccceecccceEEeecc-cchHHHHHHHHhhccccccccccccc
Confidence            3467889999999865 99999999999999999999876543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.83  E-value=0.068  Score=40.79  Aligned_cols=35  Identities=26%  Similarity=0.404  Sum_probs=31.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG   43 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~   43 (259)
                      .+++||+++|.| .|-+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            468999999999 68999999999999999987663

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.72  E-value=0.099  Score=38.22  Aligned_cols=38  Identities=13%  Similarity=0.013  Sum_probs=31.2

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      ++.|. |.|-+|..+|..|+++|++|+++|.+.+..+.+
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            36666 567999999999999999999999987655443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.69  E-value=0.79  Score=31.56  Aligned_cols=44  Identities=14%  Similarity=0.174  Sum_probs=31.3

Q ss_pred             cEEEEeCCccchHHHHHHHHHHc--CCeEEEE--eCChhhHHHHHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKH--GAAIAIM--GRRKTVLRSAVAAL   56 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~--G~~vv~~--~r~~~~~~~~~~~~   56 (259)
                      |++.|.|+||.||.....-+.+.  .++|+.+  .+|.+.+.+...++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            57999999999999999988876  4677654  44444444444443

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.68  E-value=0.34  Score=34.24  Aligned_cols=80  Identities=14%  Similarity=0.100  Sum_probs=49.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +|+++|=.|+++|.   ++..++++|++|+.++.++...+.+.+.++..+....+...|   .+.   +.........++
T Consensus        41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d~---~~~~~~~~~~~f  111 (171)
T d1ws6a1          41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALP---VEV---FLPEAKAQGERF  111 (171)
T ss_dssp             TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSC---HHH---HHHHHHHTTCCE
T ss_pred             CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeee---hhc---ccccccccCCcc
Confidence            56666655555442   334566789999999999988888877776555444443332   222   122223333579


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |+++.++-+
T Consensus       112 D~If~DPPY  120 (171)
T d1ws6a1         112 TVAFMAPPY  120 (171)
T ss_dssp             EEEEECCCT
T ss_pred             ceeEEcccc
Confidence            999998754

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.50  E-value=0.19  Score=33.04  Aligned_cols=34  Identities=18%  Similarity=0.207  Sum_probs=26.4

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHc---CCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKH---GAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~---G~~vv~~~r~~   46 (259)
                      +++++|.|| |.+|.++|..|.+.   |.+|.++.+..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            578999988 69999999766654   55798887753

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=92.48  E-value=0.061  Score=40.97  Aligned_cols=31  Identities=32%  Similarity=0.474  Sum_probs=27.3

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ++|+||+ -.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGaG-i~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGGG-IIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCC
Confidence            7777764 899999999999999999999864

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.47  E-value=0.081  Score=40.01  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=31.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG   43 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~   43 (259)
                      .+++||+++|-| .|-+|..+++.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            368999999997 77999999999999999988665

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.45  E-value=0.21  Score=34.57  Aligned_cols=54  Identities=7%  Similarity=0.096  Sum_probs=36.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHc--CCeEEEEeCChhhHHHHHHHHHhcCCCeEE
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIG   65 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~   65 (259)
                      +.|++.|.|+||.||.....-+.+.  .++|+.+.-+. ..+.+.+.+++..++..+
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~   56 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAV   56 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhccccce
Confidence            3589999999999999999988775  56777653222 234455555555554443

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.41  E-value=0.086  Score=37.08  Aligned_cols=35  Identities=14%  Similarity=0.313  Sum_probs=29.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCC--eEEEEeCCh
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRK   46 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~vv~~~r~~   46 (259)
                      .||+++|+||+ -.|.++|..|.+.|.  +|+++++++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            48999999986 779999999999885  688887654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.40  E-value=0.11  Score=36.03  Aligned_cols=38  Identities=8%  Similarity=0.048  Sum_probs=30.2

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      ++-|.| .|-+|.++++.|.++|++|+..+++.+.....
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            355664 58999999999999999999988776654443

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.33  E-value=0.075  Score=41.31  Aligned_cols=36  Identities=17%  Similarity=0.348  Sum_probs=30.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      -+.|+|+|+||+ --|..+|..|+++|++|+++.++.
T Consensus        28 ~~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            356899999976 669999999999999999998754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.27  E-value=0.54  Score=33.71  Aligned_cols=77  Identities=16%  Similarity=0.131  Sum_probs=56.5

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC-CeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .++++++|=.|++.|  + .+..|+++|++|+.++.++..++.+.+.....+. .+.+...|+.+..-           -
T Consensus        28 ~~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~   93 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------D   93 (198)
T ss_dssp             TSCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------C
T ss_pred             cCCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------c
Confidence            356778999998655  3 5678899999999999999888877766665543 47888888775421           1


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      +.+|+++.+.-+
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            468999876653

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.20  E-value=0.056  Score=38.88  Aligned_cols=42  Identities=17%  Similarity=0.373  Sum_probs=32.7

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHh
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS   58 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~   58 (259)
                      ++.|.|+ |..|.++|..|++.|.+|.+.+|+.+.  +..+.++.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            5778886 589999999999999999999986552  33455543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.19  E-value=0.15  Score=38.23  Aligned_cols=35  Identities=14%  Similarity=0.146  Sum_probs=29.9

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHH-cCCeEEEEe
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMG   43 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~-~G~~vv~~~   43 (259)
                      .++++++++|-| .|-+|+.+++.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            468999999997 77999999999985 599987664

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.88  E-value=0.36  Score=35.78  Aligned_cols=79  Identities=20%  Similarity=0.133  Sum_probs=60.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc------CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .|.+||-.|+++|--.++..+++....+|+.++++++..+...+.+...      ..++.+...|..+.          .
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~----------~  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----------Y  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----------C
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc----------c
Confidence            5679999999999888888888887779999999988887777766532      23577888886521          1


Q ss_pred             HHcCCccEEEECCCC
Q 024976           85 NHFGKLDILVNAAAG   99 (259)
Q Consensus        85 ~~~g~id~li~~ag~   99 (259)
                      ...+++|.++.+++.
T Consensus       146 ~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         146 AEEAPYDAIHVGAAA  160 (224)
T ss_dssp             GGGCCEEEEEECSBB
T ss_pred             chhhhhhhhhhhcch
Confidence            123579999998875

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.88  E-value=0.16  Score=37.75  Aligned_cols=37  Identities=19%  Similarity=0.265  Sum_probs=31.7

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .-.+|+++|+||+ .-|...|..|+++|++|.++.++.
T Consensus        46 ~~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecc
Confidence            3467899999986 679999999999999999997643

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.68  E-value=0.11  Score=40.87  Aligned_cols=36  Identities=33%  Similarity=0.485  Sum_probs=30.4

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      +.|+++|+||+ --|..+|..|+++|++|.++..+..
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCCC
Confidence            46899999876 6789999999999999999987643

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=91.48  E-value=0.42  Score=35.43  Aligned_cols=75  Identities=17%  Similarity=0.047  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|.++|-.|+++|--.+   .|++.+.+|+.++.+++..+...+.+.. ..++.++..|..+-          ....+++
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~-~~nv~~~~~d~~~g----------~~~~~pf  135 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY-YNNIKLILGDGTLG----------YEEEKPY  135 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT-CSSEEEEESCGGGC----------CGGGCCE
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc-ccccccccCchhhc----------chhhhhH
Confidence            56789999998885443   4566677899999998877666555443 45789999997631          1123689


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |.++.+++.
T Consensus       136 D~Iiv~~a~  144 (224)
T d1vbfa_         136 DRVVVWATA  144 (224)
T ss_dssp             EEEEESSBB
T ss_pred             HHHHhhcch
Confidence            999988874

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.39  E-value=0.27  Score=34.45  Aligned_cols=39  Identities=18%  Similarity=0.273  Sum_probs=34.6

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      .++.||+++|.|= |-+|+.+|+.|...|++|+++..++-
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            3588999999985 58999999999999999999988864

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.34  E-value=1.1  Score=34.82  Aligned_cols=82  Identities=17%  Similarity=0.098  Sum_probs=54.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHH--hcC-CCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--SLG-IPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~--~~~-~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      ++++||=..+..|   .++.++++.|++|+.++.+...++.+.+.+.  ... .++.+++.|+.      ++++...+.-
T Consensus       132 ~~~rVLdlf~~tG---~~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~~  202 (309)
T d2igta1         132 RPLKVLNLFGYTG---VASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERRG  202 (309)
T ss_dssp             SCCEEEEETCTTC---HHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHHT
T ss_pred             CCCeEEEecCCCc---HHHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhcC
Confidence            4666765544443   1333456789999999999988888777654  332 35888988874      3344444444


Q ss_pred             CCccEEEECCCCCC
Q 024976           88 GKLDILVNAAAGNF  101 (259)
Q Consensus        88 g~id~li~~ag~~~  101 (259)
                      .++|+||..+-.+.
T Consensus       203 ~~fD~IilDPP~f~  216 (309)
T d2igta1         203 STYDIILTDPPKFG  216 (309)
T ss_dssp             CCBSEEEECCCSEE
T ss_pred             CCCCEEEECCCccc
Confidence            68999999987543

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=91.22  E-value=0.82  Score=30.81  Aligned_cols=86  Identities=17%  Similarity=0.127  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCc---cchHHHHHHHHHHcCCeEEEEeCChhh--H--HHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHH
Q 024976           11 KGKVALLTGGG---SGIGFEISLQLGKHGAAIAIMGRRKTV--L--RSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST   83 (259)
Q Consensus        11 ~~k~~lItGa~---~giG~~~a~~l~~~G~~vv~~~r~~~~--~--~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~   83 (259)
                      +.|++.|+|+|   +..|..+.+.|.+.|++++.+.-+...  .  ......+.+....+..+.+ +...+.+.++++++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v-~~p~~~v~~~v~~~   90 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV-FRPPSALMDHLPEV   90 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-CSCHHHHTTTHHHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE-eccHHHHHHHHHHH
Confidence            57899999999   569999999999999998887554321  0  0011111111222222222 33577777777777


Q ss_pred             HHHcCCccEEEECCCC
Q 024976           84 INHFGKLDILVNAAAG   99 (259)
Q Consensus        84 ~~~~g~id~li~~ag~   99 (259)
                      .+.  .+..++...|.
T Consensus        91 ~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          91 LAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHH--CCSCEEECTTC
T ss_pred             Hhh--CCCeEEEecCc
Confidence            665  45677777774

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.20  E-value=0.77  Score=31.56  Aligned_cols=82  Identities=12%  Similarity=0.079  Sum_probs=52.7

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc------CCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +-+.|- |-+|..++++|.+.|+.+ +..|+.++.+...++....      -.+...+...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            556665 799999999999988755 5677777666666554211      01223344456677778777777765544


Q ss_pred             CccEEEECCC
Q 024976           89 KLDILVNAAA   98 (259)
Q Consensus        89 ~id~li~~ag   98 (259)
                      +-.++|.+.-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5555665554

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.19  E-value=0.16  Score=39.34  Aligned_cols=35  Identities=20%  Similarity=0.237  Sum_probs=31.3

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEe
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG   43 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~   43 (259)
                      .+|+||+++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            4689999999986 6999999999999999988764

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=90.94  E-value=0.56  Score=34.27  Aligned_cols=75  Identities=13%  Similarity=0.094  Sum_probs=56.2

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      ++++|=.|++.|.-   +..|+++|.+|+.+|.+++.++.+.+.+... ..++.++.+|..+..-          ..+.+
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~----------~~~~f   82 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF----------TDERF   82 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS----------CTTCE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccccccccccccccccccc----------ccccc
Confidence            57899999988743   4677889999999999998888777666544 3568999999886420          01479


Q ss_pred             cEEEECCCC
Q 024976           91 DILVNAAAG   99 (259)
Q Consensus        91 d~li~~ag~   99 (259)
                      |+++.+..+
T Consensus        83 D~v~~~~~l   91 (231)
T d1vl5a_          83 HIVTCRIAA   91 (231)
T ss_dssp             EEEEEESCG
T ss_pred             ccccccccc
Confidence            999988775

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.72  E-value=0.23  Score=35.79  Aligned_cols=40  Identities=15%  Similarity=0.136  Sum_probs=34.6

Q ss_pred             CCCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976            7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus         7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      ...+.++++.|.| .|.||+.+++.+...|.+|+..++...
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          39 SFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence            3568999999995 569999999999999999999987643

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.59  E-value=0.61  Score=36.33  Aligned_cols=75  Identities=27%  Similarity=0.333  Sum_probs=52.4

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHh--cCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++||+||-.|++.|+   ++..+++.|+ +|+.++.++. .....+....  ...++.++..|+.+.+.          .
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------c
Confidence            478999999999885   5667888897 5888987654 4444444433  34569999999886431          1


Q ss_pred             cCCccEEEECCC
Q 024976           87 FGKLDILVNAAA   98 (259)
Q Consensus        87 ~g~id~li~~ag   98 (259)
                      .+++|+++...-
T Consensus        98 ~~~~D~ivs~~~  109 (316)
T d1oria_          98 VEKVDIIISEWM  109 (316)
T ss_dssp             SSCEEEEEECCC
T ss_pred             cceeEEEeeeee
Confidence            247899987643

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.59  E-value=0.51  Score=30.77  Aligned_cols=34  Identities=29%  Similarity=0.363  Sum_probs=27.1

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHc---CCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKH---GAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~---G~~vv~~~r~~   46 (259)
                      .|+++|.||+ .+|.++|..|.+.   |.+|.++.|..
T Consensus        18 p~~v~IiGgG-~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGGG-YISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECSS-HHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECCC-hHHHHHHHHhHhhcccccccceecccc
Confidence            5789999875 9999999876654   88899987753

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.54  E-value=0.3  Score=36.63  Aligned_cols=35  Identities=23%  Similarity=0.459  Sum_probs=29.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEe
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMG   43 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~   43 (259)
                      ..++||+++|-|- |-+|..+++.|.++ |++|+.+.
T Consensus        28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            3589999999987 56999999999865 99977664

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.01  E-value=0.15  Score=38.75  Aligned_cols=30  Identities=23%  Similarity=0.511  Sum_probs=26.2

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      ++|+||+ -.|..+|.+|+++|.+|+++++.
T Consensus         6 vvIIGaG-i~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAG-SMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCC
Confidence            6777764 78999999999999999999875

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.68  E-value=0.19  Score=37.09  Aligned_cols=34  Identities=24%  Similarity=0.522  Sum_probs=29.5

Q ss_pred             CcEEEEeCCccchHHH-----HHHHHHHcCCeEEEEeCC
Q 024976           12 GKVALLTGGGSGIGFE-----ISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        12 ~k~~lItGa~~giG~~-----~a~~l~~~G~~vv~~~r~   45 (259)
                      +|++.|+|+-||.|+.     +|..|++.|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            7899999999999975     566788999999999865

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.58  E-value=1.9  Score=30.42  Aligned_cols=81  Identities=14%  Similarity=0.102  Sum_probs=54.9

Q ss_pred             CCCCcEEEEeC-CccchHHHHHHHHHHcCCe-EEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976            9 ILKGKVALLTG-GGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus         9 ~l~~k~~lItG-a~~giG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      .++|+++|=.. |+|.+|.+    .+++|++ |+.++.+....+.+.+.+...  ..++.++..|+.+      +++...
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhc
Confidence            45777766554 44556654    5668985 999999988888777776543  3368888888742      344444


Q ss_pred             HHcCCccEEEECCCC
Q 024976           85 NHFGKLDILVNAAAG   99 (259)
Q Consensus        85 ~~~g~id~li~~ag~   99 (259)
                      ....++|+++..+-+
T Consensus       109 ~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         109 EEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HTTCCEEEEEECCCG
T ss_pred             ccCCCcceEEechhh
Confidence            444579999988764

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.48  E-value=0.13  Score=37.50  Aligned_cols=32  Identities=19%  Similarity=0.129  Sum_probs=27.6

Q ss_pred             cEEEEeCCccchHHH-----HHHHHHHcCCeEEEEeC
Q 024976           13 KVALLTGGGSGIGFE-----ISLQLGKHGAAIAIMGR   44 (259)
Q Consensus        13 k~~lItGa~~giG~~-----~a~~l~~~G~~vv~~~r   44 (259)
                      |++.|||-+.|+|+-     +++.|+++|.+|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            789999999899974     67789999999999863

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.48  E-value=0.18  Score=38.92  Aligned_cols=31  Identities=19%  Similarity=0.384  Sum_probs=26.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC-eEEEEeCC
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR   45 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~   45 (259)
                      .|+|+||+ -+|.++|.+|+++|. +|++++++
T Consensus         3 dViIIGaG-i~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAG-IVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCS-HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcC-HHHHHHHHHHHHcCCCcEEEEeCC
Confidence            47788765 899999999999997 59999876

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.37  E-value=0.91  Score=35.45  Aligned_cols=75  Identities=25%  Similarity=0.337  Sum_probs=52.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++|++||-.|++.|+   ++..+++.|+ +|+.++.++ ..+.+.+.....  ..++.+++.|+.+.+-          .
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------P  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------c
Confidence            478999999999884   4667788998 588888764 444444444433  4578999999886421          1


Q ss_pred             cCCccEEEECCC
Q 024976           87 FGKLDILVNAAA   98 (259)
Q Consensus        87 ~g~id~li~~ag   98 (259)
                      ...+|+++...-
T Consensus       103 ~~~~D~i~se~~  114 (328)
T d1g6q1_         103 FPKVDIIISEWM  114 (328)
T ss_dssp             SSCEEEEEECCC
T ss_pred             ccceeEEEEEec
Confidence            146999988654

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=89.32  E-value=0.17  Score=38.53  Aligned_cols=37  Identities=14%  Similarity=0.273  Sum_probs=31.0

Q ss_pred             CCcEEEEeCCccchHHHH-----HHHHHHcCCeEEEEeCChh
Q 024976           11 KGKVALLTGGGSGIGFEI-----SLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~-----a~~l~~~G~~vv~~~r~~~   47 (259)
                      .++.++|+.|-||+|+.+     |..|+++|.+|.++|-+..
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            356777887799999976     6889999999999998854

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.16  E-value=0.2  Score=36.75  Aligned_cols=31  Identities=13%  Similarity=0.161  Sum_probs=26.6

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      |+|+|| |--|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            678874 5779999999999999999998864

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=89.11  E-value=0.73  Score=28.61  Aligned_cols=69  Identities=22%  Similarity=0.269  Sum_probs=45.2

Q ss_pred             cEEEEeCCccchHH-HHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           13 KVALLTGGGSGIGF-EISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        13 k~~lItGa~~giG~-~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      .++-++|- +|+|. ++|+.|.++|+.|...|++...   ..+.+.+.|.++.. .-|..+              ....|
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~---~t~~L~~~Gi~i~~-gh~~~~--------------i~~~d   62 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETE---RTAYLRKLGIPIFV-PHSADN--------------WYDPD   62 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTTCCEES-SCCTTS--------------CCCCS
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCCh---hHHHHHHCCCeEEe-eecccc--------------cCCCC
Confidence            34556654 57887 6789999999999999988643   23346666644421 122221              13689


Q ss_pred             EEEECCCCC
Q 024976           92 ILVNAAAGN  100 (259)
Q Consensus        92 ~li~~ag~~  100 (259)
                      .||+..++.
T Consensus        63 ~vV~SsAI~   71 (89)
T d1j6ua1          63 LVIKTPAVR   71 (89)
T ss_dssp             EEEECTTCC
T ss_pred             EEEEecCcC
Confidence            999999973

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.56  E-value=0.2  Score=38.26  Aligned_cols=33  Identities=24%  Similarity=0.364  Sum_probs=29.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      .|+|+||+ -.|+.+|..|++.|.+|+++.++.+
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            57888887 8899999999999999999998753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=88.42  E-value=0.19  Score=38.08  Aligned_cols=32  Identities=16%  Similarity=0.333  Sum_probs=27.6

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .|+|+|| |--|..+|..|+++|++|.++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            5889988 5789999999999999999997653

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.25  E-value=0.62  Score=32.17  Aligned_cols=34  Identities=15%  Similarity=0.266  Sum_probs=26.3

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCe-EEEEeCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR   45 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-vv~~~r~   45 (259)
                      .+++++|.|| |..|..+|..+.+.|++ |.++.|+
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            3455777765 48899999999999996 7677765

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.12  E-value=0.75  Score=33.92  Aligned_cols=79  Identities=24%  Similarity=0.205  Sum_probs=57.1

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHc-C----CeEEEEeCChhhHHHHHHHHHhc------CCCeEEEEcCCCCHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKH-G----AAIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRV   79 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~-G----~~vv~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~~~~~   79 (259)
                      .+.++|.+|+++|--.++..+++.. |    .+|+.++++++-.+...+.+...      ..++.++..|..+.      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            5689999999999888888888753 4    47999999887666555443221      23688999997631      


Q ss_pred             HHHHHHHcCCccEEEECCCC
Q 024976           80 VESTINHFGKLDILVNAAAG   99 (259)
Q Consensus        80 ~~~~~~~~g~id~li~~ag~   99 (259)
                          ....+++|.++.+++.
T Consensus       154 ----~~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         154 ----YPPNAPYNAIHVGAAA  169 (223)
T ss_dssp             ----CGGGCSEEEEEECSCB
T ss_pred             ----cccccceeeEEEEeec
Confidence                1123589999998885

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.07  E-value=0.15  Score=33.02  Aligned_cols=38  Identities=13%  Similarity=0.187  Sum_probs=31.2

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .+++||+|+|.|++ --|..++..|++.+.++++..|+.
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            35899999999987 668889999999888877776654

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=88.04  E-value=2.3  Score=27.56  Aligned_cols=81  Identities=11%  Similarity=0.117  Sum_probs=54.5

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD   91 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id   91 (259)
                      ||++||.--...+-..+.+.|.+.|++|..+..-.+    ..+.+.....++.++-..+-+.+. -++++++++....+-
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~e----al~~~~~~~~dlillD~~mP~~~G-~el~~~lr~~~~~~p   75 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQ----ALDIVTKERPDLVLLDMKIPGMDG-IEILKRMKVIDENIR   75 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHH----HHHHHHHHCCSEEEEESCCTTCCH-HHHHHHHHHHCTTCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHH----HHHHHHhCCCCEEEEeccCCCCCH-HHHHHHHHHhCCCCc
Confidence            588999999999999999999999999887654333    333444444556666555555443 355666766655666


Q ss_pred             EEEECC
Q 024976           92 ILVNAA   97 (259)
Q Consensus        92 ~li~~a   97 (259)
                      +++..+
T Consensus        76 vi~lt~   81 (119)
T d1peya_          76 VIIMTA   81 (119)
T ss_dssp             EEEEES
T ss_pred             EEEEec
Confidence            666554

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=87.89  E-value=1.6  Score=33.16  Aligned_cols=77  Identities=17%  Similarity=0.090  Sum_probs=53.5

Q ss_pred             cEEEEeCCccc-hHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCC-CeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           13 KVALLTGGGSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        13 k~~lItGa~~g-iG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .+++=.|.++| ||.+++..+  ..++|+.+|-+...++.+.+.....+. ++.+++.|+.+.-           ..+++
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~-----------~~~~f  176 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL-----------AGQQF  176 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG-----------TTCCE
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc-----------CCCce
Confidence            34555555544 555544432  356899999999988888877766554 5999999987531           01479


Q ss_pred             cEEEECCCCCCC
Q 024976           91 DILVNAAAGNFL  102 (259)
Q Consensus        91 d~li~~ag~~~~  102 (259)
                      |++|.|+-+...
T Consensus       177 DlIvsNPPYi~~  188 (274)
T d2b3ta1         177 AMIVSNPPYIDE  188 (274)
T ss_dssp             EEEEECCCCBCT
T ss_pred             eEEEecchhhhh
Confidence            999999987643

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.60  E-value=0.82  Score=30.44  Aligned_cols=77  Identities=16%  Similarity=0.186  Sum_probs=51.8

Q ss_pred             CCcEEEEeCCc-cch---------HHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976           11 KGKVALLTGGG-SGI---------GFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus        11 ~~k~~lItGa~-~gi---------G~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      ..|++||.|++ --|         +...++.|.+.|++++++..|++......+    ...   -+...--+.+.+.+++
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d----~aD---~lYfePlt~e~v~~Ii   78 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE----MAD---ATYIEPIHWEVVRKII   78 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG----GSS---EEECSCCCHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh----hcc---eeeeecCCHHHHHHHH
Confidence            45788888875 233         456788899999999999988764322110    111   2333455578888887


Q ss_pred             HHHHHHcCCccEEEECCCC
Q 024976           81 ESTINHFGKLDILVNAAAG   99 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~   99 (259)
                      +.     .++|.++-.-|.
T Consensus        79 ~~-----E~pd~il~~~GG   92 (127)
T d1a9xa3          79 EK-----ERPDAVLPTMGG   92 (127)
T ss_dssp             HH-----HCCSEEECSSSH
T ss_pred             HH-----hCcCCeEEEeee
Confidence            64     379999988873

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.57  E-value=1  Score=31.16  Aligned_cols=83  Identities=16%  Similarity=0.292  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC--CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      +|+++.|.+.+||.|--++..+.+.|.++.-.  .++..+++.+.+....  .+..-+..+ .+.+...++++.+.+. +
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~~~t~~~L~~~lp~~~~~~NPlD~~~~-~~~~~~~~~l~~~~~d-~   77 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--EEKTIEELRSFLPPMAAVKNPVDMIAS-ARGEDYYRTAKLLLQD-P   77 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--CHHHHHHHHHHSCTTCEESSEEECCTT-CCHHHHHHHHHHHHHS-T
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--CHHHHHHHHHhCCCcccCCCcccccCC-CCHHHHHHHHHHHHcC-C
Confidence            47889999999999999999999999766433  3333333333332221  122223333 3567777777766654 5


Q ss_pred             CccEEEECC
Q 024976           89 KLDILVNAA   97 (259)
Q Consensus        89 ~id~li~~a   97 (259)
                      .+|.++...
T Consensus        78 ~vd~v~v~~   86 (163)
T d2csua3          78 NVDMLIAIC   86 (163)
T ss_dssp             TCSEEEEEE
T ss_pred             CcCEEEEee
Confidence            688765543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=87.50  E-value=1.2  Score=31.02  Aligned_cols=85  Identities=14%  Similarity=0.184  Sum_probs=54.5

Q ss_pred             cEEEEeCCccchHHHHHHHHHHc-CCeEE-EEeCChhh-HHHHHHHHHh---cC----------CCeEEEEcCCCCHHHH
Q 024976           13 KVALLTGGGSGIGFEISLQLGKH-GAAIA-IMGRRKTV-LRSAVAALHS---LG----------IPAIGLEGDVRKREDA   76 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~-G~~vv-~~~r~~~~-~~~~~~~~~~---~~----------~~v~~~~~Dl~~~~~~   76 (259)
                      -+++|.|++|-+|+++++.+.+. +++++ .++|.... ......++..   .+          .+..-+..|++.++.+
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~p~~~   84 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGT   84 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEeccHHHH
Confidence            36899999999999999998876 66654 44543211 0000000000   00          0011256899999999


Q ss_pred             HHHHHHHHHHcCCccEEEECCCC
Q 024976           77 VRVVESTINHFGKLDILVNAAAG   99 (259)
Q Consensus        77 ~~~~~~~~~~~g~id~li~~ag~   99 (259)
                      .+.++.+.+.  ++.+|+-..|+
T Consensus        85 ~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHhc--cceeEEecCCC
Confidence            9999877665  68889988884

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.29  E-value=0.26  Score=34.66  Aligned_cols=30  Identities=23%  Similarity=0.335  Sum_probs=24.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEE
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAI   41 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~   41 (259)
                      .++.++|.||+ .+|.++|..|.+.|.++.+
T Consensus         2 ~~~~VvIIGgG-~~G~e~A~~l~~~g~~v~v   31 (185)
T d1q1ra1           2 ANDNVVIVGTG-LAGVEVAFGLRASGWEGNI   31 (185)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHHHTTCCSEE
T ss_pred             CCCCEEEECCc-HHHHHHHHHHHHcCCceEE
Confidence            46788888865 9999999999999987433

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=87.26  E-value=2.9  Score=29.31  Aligned_cols=64  Identities=16%  Similarity=0.095  Sum_probs=49.7

Q ss_pred             HHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCCC
Q 024976           33 GKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG   99 (259)
Q Consensus        33 ~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~   99 (259)
                      .++|-+++++..+....+.+.+.+...|-++..++.++.+.+- .+.++...+  |.+++||+..-.
T Consensus        28 ~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR-~~~l~~F~~--G~~~vLVaT~v~   91 (174)
T d1c4oa2          28 AARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKR-QALIRDLRL--GHYDCLVGINLL   91 (174)
T ss_dssp             HHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHH-HHHHHHHHT--TSCSEEEESCCC
T ss_pred             HhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHH-HHHHHHHHC--CCeEEEEeeeee
Confidence            3568889999999998999999999999999999999996554 222232322  799999998653

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=87.23  E-value=1.2  Score=32.62  Aligned_cols=76  Identities=16%  Similarity=0.075  Sum_probs=56.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      .|.+||=.|++.|.   ++..|+++|.+|+.+|.+...++.+.+.+...+ .++.+++.|..+..- .         .+.
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~-~---------~~~   82 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPF-P---------DDS   82 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCS-C---------TTC
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccccccccccccccccccc-c---------ccc
Confidence            46789999998884   456777889999999999888887777766544 468999999875320 0         157


Q ss_pred             ccEEEECCCC
Q 024976           90 LDILVNAAAG   99 (259)
Q Consensus        90 id~li~~ag~   99 (259)
                      +|+++.+-..
T Consensus        83 fD~v~~~~~l   92 (234)
T d1xxla_          83 FDIITCRYAA   92 (234)
T ss_dssp             EEEEEEESCG
T ss_pred             cceeeeecee
Confidence            9988887654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.09  E-value=0.32  Score=36.12  Aligned_cols=32  Identities=19%  Similarity=0.511  Sum_probs=27.5

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      ++|+||+ .-|..+|..|+++|.+|+++.++..
T Consensus         5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            6788766 7889999999999999999988754

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.90  E-value=0.56  Score=34.22  Aligned_cols=77  Identities=16%  Similarity=0.121  Sum_probs=53.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      .|.+||=.|++.|.-......+...| +|+.++.++..++.+.+..+.. .++.++..|..+.......       +..+
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~-------~~~v  126 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGI-------VEKV  126 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTT-------CCCE
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCccccccc-------cceE
Confidence            47899999999885444333444444 8999999999888877776554 4788999998876553222       2357


Q ss_pred             cEEEEC
Q 024976           91 DILVNA   96 (259)
Q Consensus        91 d~li~~   96 (259)
                      |++++.
T Consensus       127 d~v~~~  132 (209)
T d1nt2a_         127 DLIYQD  132 (209)
T ss_dssp             EEEEEC
T ss_pred             EEEEec
Confidence            777654

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=86.80  E-value=2.6  Score=32.36  Aligned_cols=57  Identities=19%  Similarity=0.119  Sum_probs=36.5

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEE-eCChhhHHHHHHHHHhcCCCeEEEEcCCCC
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRK   72 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   72 (259)
                      ..+|+..+|.-|.+++...+..|.+++++ ..+.+  +...+.++..|.++..+..+..+
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~k~~~l~~~Ga~vi~~~~~~~~  127 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAP--EAKVAATKGYGGQVIMYDRYKDD  127 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCC--HHHHHHHHHTTCEEEEECTTTTC
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeeccccccc--HHHHHHHHHcCCcEEeccCCchH
Confidence            35788888899999999999999885554 33322  22344455666666555444433

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.67  E-value=0.17  Score=39.07  Aligned_cols=78  Identities=13%  Similarity=0.101  Sum_probs=50.5

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCC-----eEEEEcCCCCHHHHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-----AIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~-----v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      .++++|=.|++.|.   ++..|+++|++|+.+|.+++.++.+.+.....+..     ..+..+|....+.  .     ..
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~  125 (292)
T d1xvaa_          56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK--D-----VP  125 (292)
T ss_dssp             TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH--H-----SC
T ss_pred             CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccc--c-----cC
Confidence            35789999988775   46678889999999999999888777666544322     2344455433221  0     00


Q ss_pred             HcCCccEEEECCC
Q 024976           86 HFGKLDILVNAAA   98 (259)
Q Consensus        86 ~~g~id~li~~ag   98 (259)
                      ..+.+|.+++...
T Consensus       126 ~~~~fd~v~~~~~  138 (292)
T d1xvaa_         126 AGDGFDAVICLGN  138 (292)
T ss_dssp             CTTCEEEEEECSS
T ss_pred             CCCCceEEEEecC
Confidence            1136888887554

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.61  E-value=0.28  Score=36.03  Aligned_cols=34  Identities=18%  Similarity=0.387  Sum_probs=28.6

Q ss_pred             cEEEEeCCccchHHH-----HHHHHHHcCCeEEEEeCCh
Q 024976           13 KVALLTGGGSGIGFE-----ISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        13 k~~lItGa~~giG~~-----~a~~l~~~G~~vv~~~r~~   46 (259)
                      |++.|+++-||.|+.     +|..|+++|.+|.++|-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999999999975     5667889999999998663

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.60  E-value=1.9  Score=30.56  Aligned_cols=76  Identities=13%  Similarity=0.093  Sum_probs=56.1

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc---CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ..++++|=.|++.|   .++..+++.+.+|.+++.++...+...+.++..   +.++.++.+|+.+.-  .         
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~--~---------  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--K---------  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--T---------
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh--c---------
Confidence            46789999988877   445667788889999999988777777666543   346889999986421  1         


Q ss_pred             cCCccEEEECCCC
Q 024976           87 FGKLDILVNAAAG   99 (259)
Q Consensus        87 ~g~id~li~~ag~   99 (259)
                      .+.+|+++.|..+
T Consensus       117 ~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 DRKYNKIITNPPI  129 (194)
T ss_dssp             TSCEEEEEECCCS
T ss_pred             cCCceEEEEcccE
Confidence            1479999998764

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.58  E-value=3.6  Score=28.29  Aligned_cols=73  Identities=12%  Similarity=-0.050  Sum_probs=41.0

Q ss_pred             EEEEeCCccchHHHHHHH-HHHc-----CCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           14 VALLTGGGSGIGFEISLQ-LGKH-----GAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~-l~~~-----G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++.|.||++ +|...+-. |++.     +.+++++|.++++++...+..... .....+. .- ++.++   .       
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~-~t-~~~~~---~-------   68 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL-IS-DTFEG---A-------   68 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE-EC-SSHHH---H-------
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEE-Ee-cCccc---c-------
Confidence            578888865 56555533 3321     347999999988776544333221 2222222 11 22221   1       


Q ss_pred             cCCccEEEECCCC
Q 024976           87 FGKLDILVNAAAG   99 (259)
Q Consensus        87 ~g~id~li~~ag~   99 (259)
                      ...-|++|..+|.
T Consensus        69 l~~aDvVVita~~   81 (162)
T d1up7a1          69 VVDAKYVIFQFRP   81 (162)
T ss_dssp             HTTCSEEEECCCT
T ss_pred             cCCCCEEEEeccc
Confidence            1367999999995

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=86.40  E-value=2.1  Score=30.15  Aligned_cols=78  Identities=14%  Similarity=0.073  Sum_probs=50.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCC-eEEEEeCChhhHHHHHHHHHhcC-CCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      +.++++|=.++++|   ++..+.+++|+ +|+.++.+....+.+.+.+...+ .++.++..|..      ++   +....
T Consensus        42 ~~~~~vLDlfaGsG---~~giealsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~------~~---l~~~~  109 (183)
T d2fpoa1          42 IVDAQCLDCFAGSG---ALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM------SF---LAQKG  109 (183)
T ss_dssp             HTTCEEEETTCTTC---HHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH------HH---HSSCC
T ss_pred             cchhhhhhhhcccc---ceeeeEEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeeccc------cc---ccccc
Confidence            55666665544444   23344567898 49999999988888877776543 35777877732      12   22233


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      ..+|+++..+-+
T Consensus       110 ~~fDlIf~DPPY  121 (183)
T d2fpoa1         110 TPHNIVFVDPPF  121 (183)
T ss_dssp             CCEEEEEECCSS
T ss_pred             cccCEEEEcCcc
Confidence            579999999864

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=86.39  E-value=0.22  Score=35.54  Aligned_cols=35  Identities=14%  Similarity=0.269  Sum_probs=29.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      +++.++|+||+ ..|...|..+++.|.+|+++.+..
T Consensus         4 k~~dVvIIGGG-paGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSG-PAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCS-HHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECCC-HHHHHHHHHHHHcCCceEEEEeec
Confidence            46789999876 689999999999999999997653

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=86.30  E-value=1.3  Score=31.47  Aligned_cols=76  Identities=9%  Similarity=0.045  Sum_probs=50.1

Q ss_pred             EeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 024976           17 LTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA   96 (259)
Q Consensus        17 ItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~   96 (259)
                      +..||-|-|-+ .+.+++++.+|+.+|++++..+...+ .  ...++.+++.+.++.++.   +...  ..+++|+++..
T Consensus        22 ~vD~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~-~--~~~~~~~~~~~f~~~~~~---l~~~--~~~~vdgIl~D   92 (182)
T d1wg8a2          22 YVDATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKG-L--HLPGLTVVQGNFRHLKRH---LAAL--GVERVDGILAD   92 (182)
T ss_dssp             EEETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHH-T--CCTTEEEEESCGGGHHHH---HHHT--TCSCEEEEEEE
T ss_pred             EEEeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhh-c--cccceeEeehHHHHHHHH---HHHc--CCCccCEEEEE
Confidence            34455555555 34555667799999999987655443 2  345799999998875443   2221  13579999999


Q ss_pred             CCCCC
Q 024976           97 AAGNF  101 (259)
Q Consensus        97 ag~~~  101 (259)
                      -|+..
T Consensus        93 LGvSs   97 (182)
T d1wg8a2          93 LGVSS   97 (182)
T ss_dssp             CSCCH
T ss_pred             ccCCH
Confidence            99753

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=85.95  E-value=0.81  Score=37.30  Aligned_cols=71  Identities=15%  Similarity=0.164  Sum_probs=49.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcC-CeEEEEeCC--hhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHH
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRR--KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN   85 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G-~~vv~~~r~--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~   85 (259)
                      ++..+++..||..|.+.+..++..+ .+++++...  -+..++  +.+...+.+++.+.+| .+.++++++++++..
T Consensus       125 ~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~--~Qmtt~g~nv~vi~V~-G~fDDcq~lvk~~f~  198 (428)
T d1vb3a1         125 KPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQE--KLFCTLGGNIETVAID-GDFDACQALVKQAFD  198 (428)
T ss_dssp             CCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHH--HHHHSCCTTEEEEEEE-SCHHHHHHHHHHGGG
T ss_pred             ccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHH--HHHhhccCCceEEecC-CChhHHHHHHHHHhh
Confidence            3455667778899999999999875 576666332  222222  2344557789988888 669999999988753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.71  E-value=0.52  Score=36.15  Aligned_cols=34  Identities=24%  Similarity=0.428  Sum_probs=27.8

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      +.++|+|+||+ -=|+.+|..|+++|++|.++-.+
T Consensus         4 ~~~kViVIGaG-~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIGSG-VSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEECCB-HHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECCC-HHHHHHHHHHHhCCCCEEEEeCC
Confidence            34578999876 66899999999999999998543

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=85.52  E-value=0.27  Score=37.25  Aligned_cols=33  Identities=24%  Similarity=0.385  Sum_probs=27.2

Q ss_pred             cEEEEeCCccchHHHH-----HHHHHHcCCeEEEEeCCh
Q 024976           13 KVALLTGGGSGIGFEI-----SLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        13 k~~lItGa~~giG~~~-----a~~l~~~G~~vv~~~r~~   46 (259)
                      |+++|+| -||+|+..     +..|+++|.+|.++|-+.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            5788897 88988765     458899999999998874

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=85.22  E-value=2.4  Score=31.66  Aligned_cols=76  Identities=18%  Similarity=0.143  Sum_probs=54.5

Q ss_pred             CCCcEEEEeCCccch-HHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGI-GFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        10 l~~k~~lItGa~~gi-G~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      -.|.++|=.|+++|. ...+++.+... .+|+.++++++.++.+.+.+...  ..++.+...|+.+.-      .     
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~------~-----  151 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI------S-----  151 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC------C-----
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc------c-----
Confidence            357899999988773 44445444333 48999999999999888888764  357899999987521      0     


Q ss_pred             cCCccEEEECC
Q 024976           87 FGKLDILVNAA   97 (259)
Q Consensus        87 ~g~id~li~~a   97 (259)
                      -+.+|.++.+.
T Consensus       152 ~~~fD~V~ld~  162 (250)
T d1yb2a1         152 DQMYDAVIADI  162 (250)
T ss_dssp             SCCEEEEEECC
T ss_pred             cceeeeeeecC
Confidence            14689988753

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.07  E-value=1.8  Score=28.90  Aligned_cols=33  Identities=24%  Similarity=0.333  Sum_probs=26.6

Q ss_pred             CcEEEEeCCccchHHHHHHHHH----HcCCeEEEEeCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLG----KHGAAIAIMGRR   45 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~----~~G~~vv~~~r~   45 (259)
                      .|+++|.|| |.+|.++|..|+    +.|.+|.++.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~   73 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPE   73 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccc
Confidence            578889976 599999998886    358899988764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=85.02  E-value=0.5  Score=36.62  Aligned_cols=33  Identities=24%  Similarity=0.550  Sum_probs=22.7

Q ss_pred             cEEEEeCCccc--h--HHHHHHHHHHcCCeEEEEeCC
Q 024976           13 KVALLTGGGSG--I--GFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        13 k~~lItGa~~g--i--G~~~a~~l~~~G~~vv~~~r~   45 (259)
                      |+++|++|+.|  +  ..+++++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45666655433  1  346889999999999877643

>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: ThiI-like
domain: Hypothetical protein PH1313, C-terminal domain
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.94  E-value=2.9  Score=27.83  Aligned_cols=74  Identities=15%  Similarity=0.211  Sum_probs=42.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHH-HcCCeEEEEeCC-----hhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHH
Q 024976           11 KGKVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRR-----KTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~-~~G~~vv~~~r~-----~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      +||.+.+.  |||| +.+|..+. ++|++|..+..+     .++..++.+.+..+  +.++.++.++.  .+.+.+    
T Consensus         4 ~Gk~l~Ll--SGGi-SpVAa~lmmkRG~~V~~v~f~~~~~~~ekv~~l~~~L~~y~~~~~~~~~v~~~--~~~~~r----   74 (132)
T d1vbka1           4 EGRMIGIL--HDEL-SALAIFLMMKRGVEVIPVYIGKDDKNLEKVRSLWNLLKRYSYGSKGFLVVAES--FDRVLK----   74 (132)
T ss_dssp             TCEEEEEC--SSHH-HHHHHHHHHHBTCEEEEEEESCSSHHHHHHHHHHHHHHTTCTTSCCCCEEESS--HHHHHH----
T ss_pred             CceEEEee--cCCc-hHHHHHHHHHCCCEEEEEEEcCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeH--HHHHHH----
Confidence            57777776  8899 99988765 789998766332     22333445555554  33444444443  333333    


Q ss_pred             HHHHcCCccEEE
Q 024976           83 TINHFGKLDILV   94 (259)
Q Consensus        83 ~~~~~g~id~li   94 (259)
                      +.+.++ .+.++
T Consensus        75 iA~~~~-a~~iv   85 (132)
T d1vbka1          75 LIRDFG-VKGVI   85 (132)
T ss_dssp             HHHHHT-CCEEE
T ss_pred             HHHHhh-hhceE
Confidence            444444 46666

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.60  E-value=0.49  Score=34.30  Aligned_cols=31  Identities=19%  Similarity=0.452  Sum_probs=26.7

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ++|+||+ ..|..+|..+++.|.+|+++.++.
T Consensus         6 vvVIGgG-paGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGGG-PGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECCC-HHHHHHHHHHHHCCCcEEEEEecC
Confidence            6788874 679999999999999999998653

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.58  E-value=4.7  Score=27.88  Aligned_cols=75  Identities=13%  Similarity=0.047  Sum_probs=41.7

Q ss_pred             EEEEeCCc-cchHHHHHHHHHHcC----CeEEEEeCChhh--HHHHHHH----HHhcCCCeEEEEcCCCCHHHHHHHHHH
Q 024976           14 VALLTGGG-SGIGFEISLQLGKHG----AAIAIMGRRKTV--LRSAVAA----LHSLGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus        14 ~~lItGa~-~giG~~~a~~l~~~G----~~vv~~~r~~~~--~~~~~~~----~~~~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      ++.|.||+ .|.+..++..+....    .+++++|.+++.  ++.....    +...+.++.+.  ..+|..+       
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td~~~-------   73 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLDRRR-------   73 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESCHHH-------
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCCchh-------
Confidence            57777764 566677766665432    379999988754  3322211    12223333322  2344322       


Q ss_pred             HHHHcCCccEEEECCCCC
Q 024976           83 TINHFGKLDILVNAAAGN  100 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~~  100 (259)
                         ....-|++|+.+|..
T Consensus        74 ---al~gaDvVv~ta~~~   88 (169)
T d1s6ya1          74 ---ALDGADFVTTQFRVG   88 (169)
T ss_dssp             ---HHTTCSEEEECCCTT
T ss_pred             ---hcCCCCEEEEccccC
Confidence               113679999999963

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.50  E-value=0.48  Score=34.60  Aligned_cols=31  Identities=23%  Similarity=0.502  Sum_probs=26.5

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ++|+||+ .-|...|..+++.|.+|++++++.
T Consensus         8 viVIG~G-pAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGGG-PAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCC-HHHHHHHHHHHHCCCcEEEEEecC
Confidence            5778875 569999999999999999998654

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.48  E-value=0.49  Score=36.34  Aligned_cols=30  Identities=23%  Similarity=0.630  Sum_probs=25.9

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      |+|+|+. ..|..+|.+|+++|++|+++.+.
T Consensus        19 VlVIG~G-~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGSG-GAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEecC
Confidence            6777754 88999999999999999999764

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=84.41  E-value=0.5  Score=34.24  Aligned_cols=30  Identities=17%  Similarity=0.228  Sum_probs=26.6

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      ++|+|| |..|...|..+++.|.+|+++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            578887 588999999999999999999875

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.23  E-value=0.42  Score=36.90  Aligned_cols=33  Identities=18%  Similarity=0.307  Sum_probs=27.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      -++|+||+ --|..+|++|++.|.+|.++.++..
T Consensus         3 dv~IIGaG-~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           3 DYIIVGSG-LFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEECCS-HHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             cEEEECCc-HHHHHHHHHHHhCCCcEEEEECCCC
Confidence            46788765 7799999999999999999977543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.20  E-value=0.79  Score=31.24  Aligned_cols=34  Identities=9%  Similarity=0.163  Sum_probs=27.2

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcCC---eEEEEeCCh
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRK   46 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G~---~vv~~~r~~   46 (259)
                      ..+.|.||||-.|+++.+.|.++++   ++..++.+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            4689999999999999999987653   577665543

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=84.08  E-value=0.42  Score=34.00  Aligned_cols=33  Identities=24%  Similarity=0.301  Sum_probs=26.4

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK   46 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~   46 (259)
                      ++.|.||||-.|+++.+.|.++-. ++..+..+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~   36 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT   36 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccc
Confidence            689999999999999999998753 666554443

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=83.88  E-value=0.54  Score=35.08  Aligned_cols=36  Identities=25%  Similarity=0.464  Sum_probs=29.2

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR   50 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~   50 (259)
                      -++|+||. .-|..+|..|+++|.+|+++.++.....
T Consensus         6 DViIIGaG-~aGl~aA~~la~~G~~V~vlEk~~~~G~   41 (253)
T d2gqfa1           6 ENIIIGAG-AAGLFCAAQLAKLGKSVTVFDNGKKIGR   41 (253)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSSCH
T ss_pred             cEEEECcC-HHHHHHHHHHHHCCCcEEEEecCCCCCC
Confidence            37777765 6788999999999999999998865433

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.87  E-value=2  Score=35.68  Aligned_cols=75  Identities=8%  Similarity=0.057  Sum_probs=50.2

Q ss_pred             CCcEEEEe-CCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhc-CCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           11 KGKVALLT-GGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        11 ~~k~~lIt-Ga~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      ++|.+.|. +.||..|.|.+..+... +.+|+++..+..--+--.+++... +.+|+.+.+| .+.++++.+++++...
T Consensus       149 ~~~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~-G~fDDcq~~vk~~f~d  226 (511)
T d1kl7a_         149 EKKQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT-GTFDNCQDIVKAIFGD  226 (511)
T ss_dssp             SCCCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred             cCceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEec-cChHHHHHHHHHHHhh
Confidence            34555555 55577999999999854 668777754422111122334343 5689999999 5799999999988754

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.83  E-value=4.1  Score=26.60  Aligned_cols=77  Identities=17%  Similarity=0.186  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCc-c---------chHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHH
Q 024976           11 KGKVALLTGGG-S---------GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV   80 (259)
Q Consensus        11 ~~k~~lItGa~-~---------giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~   80 (259)
                      ..|++||.|++ -         =-+...++.|.+.|++++++..|++....      ... -..-+...--..+.+.+++
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst------d~d-~aD~lYfeplt~e~v~~Ii   75 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST------DYD-TSDRLYFEPVTLEDVLEIV   75 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT------STT-SSSEEECCCCSHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc------Chh-hcCceEEccCCHHHHHHHH
Confidence            35789999885 2         23457788999999999999888764221      000 0112223344577777776


Q ss_pred             HHHHHHcCCccEEEECCCC
Q 024976           81 ESTINHFGKLDILVNAAAG   99 (259)
Q Consensus        81 ~~~~~~~g~id~li~~ag~   99 (259)
                      +.     .++|.++-.-|.
T Consensus        76 ~~-----E~p~~ii~~~GG   89 (121)
T d1a9xa4          76 RI-----EKPKGVIVQYGG   89 (121)
T ss_dssp             HH-----HCCSEEECSSST
T ss_pred             HH-----hCCCEEEeehhh
Confidence            54     278999888774

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=83.64  E-value=2.6  Score=31.67  Aligned_cols=76  Identities=13%  Similarity=-0.001  Sum_probs=54.6

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCChhhHHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHHc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHF   87 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~~~~   87 (259)
                      .+.++|=.|++.|.   ++..|+++ |++|+.++-++..++...+.....  ..++.++.+|..+..-          ..
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~----------~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC----------ED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS----------CT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc----------cc
Confidence            47799999987763   45566665 889999999988777766666543  3579999999876320          11


Q ss_pred             CCccEEEECCCC
Q 024976           88 GKLDILVNAAAG   99 (259)
Q Consensus        88 g~id~li~~ag~   99 (259)
                      +.+|+|+.....
T Consensus       134 ~sfD~V~~~~~l  145 (282)
T d2o57a1         134 NSYDFIWSQDAF  145 (282)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccchhhccchh
Confidence            479999877654

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=83.41  E-value=0.72  Score=32.99  Aligned_cols=37  Identities=11%  Similarity=0.213  Sum_probs=29.3

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHH
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA   52 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~   52 (259)
                      ++.|.| .|-+|..+|..|+ +|++|+.+|-+++..+.+
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHH
Confidence            466775 7899999997665 699999999987765544

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.08  E-value=1.1  Score=29.80  Aligned_cols=39  Identities=13%  Similarity=0.213  Sum_probs=31.8

Q ss_pred             CCCCCcEEEEeCCc---cchHHHHHHHHHHcC-CeEEEEeCCh
Q 024976            8 DILKGKVALLTGGG---SGIGFEISLQLGKHG-AAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~---~giG~~~a~~l~~~G-~~vv~~~r~~   46 (259)
                      ..+..|+++|+|+|   +..|..+.+.|.+.| .+|+.+..+.
T Consensus         4 ~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~   46 (129)
T d2csua1           4 YFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE   46 (129)
T ss_dssp             TTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC
T ss_pred             HhCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc
Confidence            45788999999999   889999999987766 4788886654

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.90  E-value=0.87  Score=33.07  Aligned_cols=38  Identities=26%  Similarity=0.392  Sum_probs=32.0

Q ss_pred             CCCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976            8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus         8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      .+++||+|+|.|++. -|..+|..+++.+++++.+.|+.
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhcccccccccc
Confidence            468999999998874 58999999999999988776653

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=82.80  E-value=1.6  Score=35.98  Aligned_cols=80  Identities=16%  Similarity=0.080  Sum_probs=50.6

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG   88 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g   88 (259)
                      .+.||+++|.|+. ....++++.|.+.|.+|+.++-.....+...+.+...+....  ..|=.|..++.+.+++.     
T Consensus       342 ~l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~~--i~~d~~~~el~~~i~~~-----  413 (477)
T d1m1na_         342 RLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTL--LYDDVTGYEFEEFVKRI-----  413 (477)
T ss_dssp             HHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTCE--EEESCBHHHHHHHHHHH-----
T ss_pred             hhcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCcE--EecCCCHHHHHHHHHhc-----
Confidence            3689999998764 578889999989999988775443322222222222222222  23444567777777765     


Q ss_pred             CccEEEEC
Q 024976           89 KLDILVNA   96 (259)
Q Consensus        89 ~id~li~~   96 (259)
                      ++|+++-+
T Consensus       414 ~pDL~ig~  421 (477)
T d1m1na_         414 KPDLIGSG  421 (477)
T ss_dssp             CCSEEEEC
T ss_pred             CCCEEEEC
Confidence            68999855

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=82.74  E-value=0.6  Score=34.23  Aligned_cols=32  Identities=19%  Similarity=0.378  Sum_probs=26.1

Q ss_pred             EEEEeCCccchHHHHHHHHHHcCC-eEEEEeCCh
Q 024976           14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK   46 (259)
Q Consensus        14 ~~lItGa~~giG~~~a~~l~~~G~-~vv~~~r~~   46 (259)
                      .|+|+||+ --|..+|..|+++|. +|+++.++.
T Consensus         2 ~V~IIGaG-~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAG-MSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCB-HHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCc-HHHHHHHHHHHhCCCCcEEEEECCC
Confidence            47788765 678999999999996 699997653

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.57  E-value=1.1  Score=31.01  Aligned_cols=37  Identities=19%  Similarity=0.373  Sum_probs=33.4

Q ss_pred             CCCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976            9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus         9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      .|+|+++++.|-.+.+..+++..|...|+++.+++..
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            4789999999999999999999999999999988754

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.51  E-value=0.54  Score=33.50  Aligned_cols=33  Identities=6%  Similarity=0.078  Sum_probs=28.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      ++.++|+||+ ..|...|..+++.|.+|+++++.
T Consensus         5 ~~~VvIIGgG-paGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           5 NTRLCIVGSG-PAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEEECCS-HHHHHHHHHHHHTTCCCEEECCS
T ss_pred             cceEEEECCC-HHHHHHHHHHHHcCCcEEEEEee
Confidence            5788999876 68999999999999999988754

>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Bacillus caldotenax [TaxId: 1395]

Probab=82.51  E-value=6.1  Score=27.64  Aligned_cols=64  Identities=17%  Similarity=0.234  Sum_probs=49.1

Q ss_pred             HHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 024976           32 LGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA   98 (259)
Q Consensus        32 l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag   98 (259)
                      ..+.+..++++..+....+.+.+.++..|-++..++.|++..+. .+.++...+  |.+++||..--
T Consensus        27 ~~~~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~eR-~~~l~~Fr~--g~~~vLVaTdv   90 (181)
T d1t5la2          27 RVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLER-IEIIRDLRL--GKYDVLVGINL   90 (181)
T ss_dssp             HHHTTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHHH-HHHHHHHHH--TSCSEEEESCC
T ss_pred             HHhcCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHHH-HHHHHHHHC--CCCCEEEehhH
Confidence            33567788888888888889999999889999999999997654 333333332  78999999854

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.18  E-value=0.7  Score=35.67  Aligned_cols=31  Identities=23%  Similarity=0.462  Sum_probs=25.9

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      |+|+||+ --|..+|.+|+++|.+|+++.++.
T Consensus         2 ViVIGaG-~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGG-ISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECCB-HHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCC-HHHHHHHHHHHhCCCCEEEEecCC
Confidence            6788776 669999999999999999997643

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=81.84  E-value=5.4  Score=26.55  Aligned_cols=87  Identities=15%  Similarity=0.069  Sum_probs=58.8

Q ss_pred             CCcEEEEe---CCccchHHHHHHHHH-HcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCC-CCHHHHHHHHHHHHH
Q 024976           11 KGKVALLT---GGGSGIGFEISLQLG-KHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV-RKREDAVRVVESTIN   85 (259)
Q Consensus        11 ~~k~~lIt---Ga~~giG~~~a~~l~-~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl-~~~~~~~~~~~~~~~   85 (259)
                      +.++++++   |=...+|..++..+. ..||+|+-++.+.+ .++..+.+.+.++++..+.+=+ .....++++++.+.+
T Consensus         2 ~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p-~e~iv~a~~~~~~d~v~lS~~~~~~~~~~~~~~~~l~~   80 (137)
T d1ccwa_           2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSP-QELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDE   80 (137)
T ss_dssp             CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEEC-HHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHH
T ss_pred             CCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccC-HHHHHHHHHhcCCCEEEEeeccccchHHHHHHHHHHHH
Confidence            45677775   344789999888765 56999998887644 4666666666677777776444 456778888887766


Q ss_pred             HcCCccEEEECCCC
Q 024976           86 HFGKLDILVNAAAG   99 (259)
Q Consensus        86 ~~g~id~li~~ag~   99 (259)
                      . +.-|+.|..-|.
T Consensus        81 ~-~~~~i~iivGG~   93 (137)
T d1ccwa_          81 A-GLEGILLYVGGN   93 (137)
T ss_dssp             T-TCTTCEEEEEES
T ss_pred             h-ccCCCEEEEeCC
Confidence            5 333555555553

>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like I
superfamily: Periplasmic binding protein-like I
family: L-arabinose binding protein-like
domain: Lac-repressor (lacR) core (C-terminal domain)
species: Escherichia coli [TaxId: 562]

Probab=81.75  E-value=6.1  Score=29.13  Aligned_cols=21  Identities=14%  Similarity=0.018  Sum_probs=15.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHH
Q 024976          166 QIHVSAAKAAVDSITRSLALE  186 (259)
Q Consensus       166 ~~~Y~~sK~a~~~l~~~la~e  186 (259)
                      ...+...+.+++.+.+.+..+
T Consensus       230 ~~~~~~g~~av~~L~~~i~g~  250 (271)
T d1jyea_         230 QDFRLLGQTSVDRLLQLSQGQ  250 (271)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTC
T ss_pred             eCHHHHHHHHHHHHHHHhcCC
Confidence            446788888888888877544

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=81.30  E-value=6.5  Score=27.16  Aligned_cols=74  Identities=16%  Similarity=0.174  Sum_probs=44.6

Q ss_pred             cEEEEeCCccchHH--HHHHHHHHc----CCeEEEEeCChhhHHHHHHHHHh----cCCCeEEEEcCCCCHHHHHHHHHH
Q 024976           13 KVALLTGGGSGIGF--EISLQLGKH----GAAIAIMGRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVES   82 (259)
Q Consensus        13 k~~lItGa~~giG~--~~a~~l~~~----G~~vv~~~r~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~~   82 (259)
                      .++.|.|| |.+|.  ++...|+..    +.+++++|.++++++.....+..    .+....+...  +|.++       
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td~~e-------   72 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNLDD-------   72 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCHHH-------
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CChhh-------
Confidence            46788887 45554  444455543    35899999998887765544432    2333443322  22222       


Q ss_pred             HHHHcCCccEEEECCCC
Q 024976           83 TINHFGKLDILVNAAAG   99 (259)
Q Consensus        83 ~~~~~g~id~li~~ag~   99 (259)
                         .....|++|+.++.
T Consensus        73 ---aL~dad~Vv~~~~~   86 (171)
T d1obba1          73 ---VIIDADFVINTAMV   86 (171)
T ss_dssp             ---HHTTCSEEEECCCT
T ss_pred             ---cccCCCeEeeeccc
Confidence               12368999999885

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=81.26  E-value=1.1  Score=32.79  Aligned_cols=71  Identities=14%  Similarity=0.076  Sum_probs=51.2

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK   89 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~   89 (259)
                      ++++++|=.|++.|.   +++.|+++|++|+.++.+++.++.+.+..   ..++.++..|+.+..           ..++
T Consensus        19 ~~~~~VLDiGcG~G~---~~~~l~~~g~~v~giD~s~~~i~~a~~~~---~~~~~~~~~~~~~~~-----------~~~~   81 (225)
T d2p7ia1          19 FRPGNLLELGSFKGD---FTSRLQEHFNDITCVEASEEAISHAQGRL---KDGITYIHSRFEDAQ-----------LPRR   81 (225)
T ss_dssp             CCSSCEEEESCTTSH---HHHHHTTTCSCEEEEESCHHHHHHHHHHS---CSCEEEEESCGGGCC-----------CSSC
T ss_pred             CCCCcEEEEeCCCcH---HHHHHHHcCCeEEEEeCcHHHhhhhhccc---ccccccccccccccc-----------cccc
Confidence            578889999888773   45678889999999999988776665443   335888888865431           1247


Q ss_pred             ccEEEECC
Q 024976           90 LDILVNAA   97 (259)
Q Consensus        90 id~li~~a   97 (259)
                      +|+++...
T Consensus        82 fD~I~~~~   89 (225)
T d2p7ia1          82 YDNIVLTH   89 (225)
T ss_dssp             EEEEEEES
T ss_pred             cccccccc
Confidence            99888754

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=81.26  E-value=5.1  Score=25.87  Aligned_cols=83  Identities=12%  Similarity=0.142  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 024976           11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL   90 (259)
Q Consensus        11 ~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~~g~i   90 (259)
                      +..++||+--...+...+.+.|.+.|++|..+..-.+    ..+.+.....++.+.-..+-+.+. -++++++.+....+
T Consensus         2 ~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~----a~~~l~~~~~dlii~D~~mp~~~G-~el~~~l~~~~~~~   76 (123)
T d1krwa_           2 QRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNE----VLAALASKTPDVLLSDIRMPGMDG-LALLKQIKQRHPML   76 (123)
T ss_dssp             CCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHH----HHHHHTTCCCSEEEECCSSSSSTT-HHHHHHHHHHSSSC
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHH----HHHHHHhCCCCEEEehhhcCCchH-HHHHHHHHHhCCCC
Confidence            3457999999999999999999999999987765433    334444434444444333333333 34566666666656


Q ss_pred             cEEEECCC
Q 024976           91 DILVNAAA   98 (259)
Q Consensus        91 d~li~~ag   98 (259)
                      -+++..+-
T Consensus        77 piI~~t~~   84 (123)
T d1krwa_          77 PVIIMTAH   84 (123)
T ss_dssp             CEEESCCC
T ss_pred             eEEEEecC
Confidence            56655543

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.25  E-value=0.91  Score=32.75  Aligned_cols=31  Identities=26%  Similarity=0.386  Sum_probs=26.4

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCCh
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK   46 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~   46 (259)
                      ++|.|| |..|..+|..+++.|.+|+++.+..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            567776 5799999999999999999998653

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=81.21  E-value=0.76  Score=34.39  Aligned_cols=30  Identities=30%  Similarity=0.680  Sum_probs=26.0

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      ++|.||+.+ |...|..+++.|.+|.++.++
T Consensus         4 viVIG~G~a-G~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSG-GMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCeEEEEecC
Confidence            577887654 999999999999999999875

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=81.17  E-value=1.5  Score=33.20  Aligned_cols=76  Identities=26%  Similarity=0.183  Sum_probs=55.9

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHH---cCCeEEEEeCChhhHHHHHHHHHhcCCCeEEEEcCCCCHHHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH   86 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~---~G~~vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~~~   86 (259)
                      .+++++|=.|++.|   ..+..|++   .|++|+.+|.++..++.+.+.+...+.++.+...|+.+..           .
T Consensus        26 ~~~~~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~-----------~   91 (281)
T d2gh1a1          26 TKPVHIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-----------L   91 (281)
T ss_dssp             CSCCEEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-----------C
T ss_pred             CCcCEEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccccc-----------c
Confidence            35678888888766   23334443   5789999999998888888888776778899999987542           1


Q ss_pred             cCCccEEEECCCC
Q 024976           87 FGKLDILVNAAAG   99 (259)
Q Consensus        87 ~g~id~li~~ag~   99 (259)
                      .+.+|+++.+...
T Consensus        92 ~~~fD~v~~~~~l  104 (281)
T d2gh1a1          92 NDKYDIAICHAFL  104 (281)
T ss_dssp             SSCEEEEEEESCG
T ss_pred             cCCceEEEEehhh
Confidence            1469999888764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=81.04  E-value=0.82  Score=31.92  Aligned_cols=30  Identities=27%  Similarity=0.550  Sum_probs=25.5

Q ss_pred             EEEeCCccchHHHHHHHHHHcCCeEEEEeCC
Q 024976           15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR   45 (259)
Q Consensus        15 ~lItGa~~giG~~~a~~l~~~G~~vv~~~r~   45 (259)
                      ++|+||+ ..|...|..+++.|.+|+++.++
T Consensus         4 ViIIGgG-paGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGSG-PAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEECCS-HHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECcC-HHHHHHHHHHHHcCCeEEEEEEe
Confidence            5677764 88999999999999999999864

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=80.73  E-value=0.78  Score=34.72  Aligned_cols=34  Identities=15%  Similarity=0.361  Sum_probs=28.3

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHc-CCeEEEEeCCh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRK   46 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~-G~~vv~~~r~~   46 (259)
                      +.-++|+|| |--|..+|.+|+++ |.+|++++++.
T Consensus        33 e~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          33 ETDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            445899988 57799999999985 99999998764

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=80.26  E-value=0.89  Score=35.03  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=28.7

Q ss_pred             CcEEEEeCCccchHHHHHHHHHHcCCeEEEEeCChh
Q 024976           12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT   47 (259)
Q Consensus        12 ~k~~lItGa~~giG~~~a~~l~~~G~~vv~~~r~~~   47 (259)
                      .--|+|+||+ --|.+++.+|.++|.+|+++.++.+
T Consensus         7 ~~dV~IIGAG-~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           7 EVDVLVVGAG-FSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEEECCS-HHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCCEEEECcc-HHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            3468888876 6788999999999999999987643

>d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, beta chain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=80.15  E-value=4.9  Score=33.36  Aligned_cols=80  Identities=13%  Similarity=0.080  Sum_probs=50.5

Q ss_pred             CCCcEEEEeCCccchHHHHHHHHHHcCCeEEEE-e-CChhh-HHHHHHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHH
Q 024976           10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-G-RRKTV-LRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI   84 (259)
Q Consensus        10 l~~k~~lItGa~~giG~~~a~~l~~~G~~vv~~-~-r~~~~-~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~   84 (259)
                      +.||+++|.|. .....++++.|.+.|..++.+ . ..... .+...+.+...  +....++  .-.|...+++.+.+. 
T Consensus       358 l~GkrvaI~gd-~~~~~~la~fL~ElG~e~~~v~~~~~~~~~~~~~~~~l~~~~~g~~~~v~--~~~Dl~~l~~~i~~~-  433 (519)
T d1qh8b_         358 LHGKKFGLYGD-PDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVF--INCDLWHFRSLMFTR-  433 (519)
T ss_dssp             HTTCEEEEESC-HHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEE--ESCCHHHHHHHHHHH-
T ss_pred             cCCcEEEEECC-cHHHHHHHHHHHHcCCeeeEEEecCCCHHHHHHHHHHHHhCcCCCCCEEE--ECCCHHHHHHHHhhc-
Confidence            67899999875 467888999999999985443 2 22222 33344444433  3334444  244667777776553 


Q ss_pred             HHcCCccEEEECC
Q 024976           85 NHFGKLDILVNAA   97 (259)
Q Consensus        85 ~~~g~id~li~~a   97 (259)
                          ++|.+|-+.
T Consensus       434 ----~pDLliG~s  442 (519)
T d1qh8b_         434 ----QPDFMIGNS  442 (519)
T ss_dssp             ----CCSEEEECT
T ss_pred             ----CCCEEEECC
Confidence                799999764

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.13  E-value=0.94  Score=35.22  Aligned_cols=34  Identities=18%  Similarity=0.310  Sum_probs=26.0

Q ss_pred             cEEEEeCCccchHHHHHHHHHHcC--CeEEEEeCChh
Q 024976           13 KVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKT   47 (259)
Q Consensus        13 k~~lItGa~~giG~~~a~~l~~~G--~~vv~~~r~~~   47 (259)
                      |+|+|+||+ --|..+|..|+++|  .+|+++.++..
T Consensus         5 KrVaIIGaG-~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGAG-PSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECcC-HHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            578888775 55778888888877  48999988753