Citrus Sinensis ID: 025065
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 258 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SAH9 | 332 | Cinnamoyl-CoA reductase 2 | no | no | 0.965 | 0.75 | 0.355 | 4e-44 | |
| Q9S9N9 | 344 | Cinnamoyl-CoA reductase 1 | no | no | 0.968 | 0.726 | 0.345 | 4e-38 | |
| P51104 | 360 | Dihydroflavonol-4-reducta | N/A | no | 0.360 | 0.258 | 0.614 | 8e-27 | |
| Q500U8 | 326 | Tetraketide alpha-pyrone | no | no | 0.344 | 0.273 | 0.666 | 1e-26 | |
| P51108 | 357 | Dihydroflavonol-4-reducta | N/A | no | 0.372 | 0.268 | 0.618 | 5e-26 | |
| P51110 | 337 | Dihydroflavonol-4-reducta | no | no | 0.976 | 0.747 | 0.303 | 4e-25 | |
| P51102 | 382 | Dihydroflavonol-4-reducta | no | no | 0.356 | 0.240 | 0.580 | 7e-25 | |
| Q9XES5 | 348 | Bifunctional dihydroflavo | N/A | no | 0.360 | 0.267 | 0.574 | 4e-24 | |
| Q84KP0 | 347 | Bifunctional dihydroflavo | N/A | no | 0.360 | 0.268 | 0.574 | 4e-24 | |
| P51106 | 354 | Dihydroflavonol-4-reducta | N/A | no | 0.364 | 0.265 | 0.6 | 5e-24 |
| >sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 178 bits (451), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 160/312 (51%), Gaps = 63/312 (20%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K+VCVTGA G++ASW+VKLLL+RGYTV+ TVR+P PK HLREL GA ERL L A+LL
Sbjct: 6 KLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKERLTLHSADLL 65
Query: 69 EEGSFDSAVDGCDGVFHTASP------------------------------VIFLSD--- 95
+ + + +DGCDGVFHTASP V+F S
Sbjct: 66 DYEALCATIDGCDGVFHTASPMTDDPETMLEPAVNGAKFVIDAAAKAKVKRVVFTSSIGA 125
Query: 96 -------------------------NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130
N + WY K LAE++AW+ AK G+DLV ++P
Sbjct: 126 VYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLVVLNPVL 185
Query: 131 VIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLL 188
V+GP Q +N IL + G +++A ++V++RDV H+ E P ASGRY+L
Sbjct: 186 VLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAPSASGRYIL 245
Query: 189 AGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPT---IKVSQERAKSLGINFTPWEVGVR 245
A + ++++ L + +P K ++ P K + ++ K LG+ F P + +
Sbjct: 246 AETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGLEFKPIKQSLY 305
Query: 246 GCIESLMEKGFL 257
++SL EKG L
Sbjct: 306 ESVKSLQEKGHL 317
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Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 4EC: 4 |
| >sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 160/313 (51%), Gaps = 63/313 (20%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K VCVTGA G++ASW+VK+LL+RGYTVK TVR+P+ PK HLREL+G ERL L KA+L
Sbjct: 11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQ 70
Query: 69 E-----------EGSF--------------DSAVDGCDGVFHTASP-----VIFLSD--- 95
+ +G F + AV+G V + A+ V+ S
Sbjct: 71 DYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGA 130
Query: 96 -------------------------NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130
N + WY K +AE+AAW+ AKE G+DLV ++P
Sbjct: 131 VYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVL 190
Query: 131 VIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLL 188
V+GP QP +N +L + G +++A +V++RDV AH+ E P ASGRYLL
Sbjct: 191 VLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGRYLL 250
Query: 189 AGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTI---KVSQERAKSLGINFTPWEVGVR 245
A S ++++ L + +P K +++ P K + ++ K LG+ FT + +
Sbjct: 251 AESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTSTKQSLY 310
Query: 246 GCIESLMEKGFLS 258
++SL EKG L+
Sbjct: 311 DTVKSLQEKGHLA 323
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Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 4 |
| >sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 74/96 (77%), Gaps = 3/96 (3%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHL 62
G+GE VCVTGASGF+ SWL+ LL+RGYTV+ATVRDP N+ K +HL +L A L L
Sbjct: 20 GQGE--TVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTL 77
Query: 63 FKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQ 98
+KA+L EEGSFD+AVDGC GVFH A+P+ F S +P+
Sbjct: 78 WKADLHEEGSFDAAVDGCTGVFHIATPMDFESKDPE 113
|
Dianthus caryophyllus (taxid: 3570) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
VCVTGASGF+ASWLVK LL GY V TVRDP N K HL +L+GA ERL L KA+L+E
Sbjct: 8 VCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLVKADLME 67
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQE 99
EGSFD+A+ GC GVFHTASPV+ + NP+E
Sbjct: 68 EGSFDNAIMGCQGVFHTASPVLKPTSNPEE 97
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Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P51108|DFRA_MAIZE Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Query: 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLH 61
+G E+ V VTGASGFV SWLV LLQ GYTV+ATVRDP N KT+ L +L GATERL
Sbjct: 5 AGASEKGTVLVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVGKTKPLMDLPGATERLS 64
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQ 98
++KA+L EEGSF A+ GC GVFH A+P+ FLS +P+
Sbjct: 65 IWKADLAEEGSFHDAIRGCTGVFHVATPMDFLSKDPE 101
|
Zea mays (taxid: 4577) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 140/323 (43%), Gaps = 71/323 (21%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLREL----------- 53
+ + VCVTGASGF+ SWLV LL+R TV+ATVRDP N K +HL +L
Sbjct: 3 SQSETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWK 62
Query: 54 -------------DGATERLHL-----FKANLLEEGSFDSAVDGCDGVFHTASP------ 89
G T H+ F++ E ++G G+ + +
Sbjct: 63 ADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRR 122
Query: 90 VIFLSD----NPQE------------------------W-YSLAKTLAEEAAWKFAKENG 120
++F S N QE W Y ++KTLAE+AAWK+AKEN
Sbjct: 123 LVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENN 182
Query: 121 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ---SFAFPYIFVEIRDVVYAHIRAL 177
ID + I P V+GPF + L+ I G++ S FV + D+ AHI
Sbjct: 183 IDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLF 242
Query: 178 EVPKASGRYLLAGSVAQHSDILKFLREHYP--TLLRSGKLEEKYQPTIKVSQERAKSLGI 235
E PKA GRY+ + D+ K LRE YP + K ++ ++ S ++ LG
Sbjct: 243 ENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGF 302
Query: 236 NFT-PWEVGVRGCIESLMEKGFL 257
F E G +++ KG L
Sbjct: 303 EFKYSLEDMFTGAVDTCRAKGLL 325
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Vitis vinifera (taxid: 29760) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKA 65
+++ VCVTGASGF+ SWLV LL+RGY V+ATVRDP N K +HL +L A L L+KA
Sbjct: 4 QKETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKA 63
Query: 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQ 98
+L EEGS+D A++GCDGVFH A+P+ F S +P+
Sbjct: 64 DLSEEGSYDDAINGCDGVFHVATPMDFESKDPE 96
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFK 64
E + VCVTGASGF+ SWLV LL+ GYTV+ATVRDP N K +HL +L A L L+K
Sbjct: 3 SESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWK 62
Query: 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQ 98
A+L +EGSFD A+ GC GVFH A+P+ F S +P+
Sbjct: 63 ADLADEGSFDEAIQGCSGVFHVATPMDFESKDPE 96
|
Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Malus domestica (taxid: 3750) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFK 64
E + VCVTGASGF+ SWLV LL+ GYTV+ATVRDP N K +HL +L A L L+K
Sbjct: 3 SESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWK 62
Query: 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQ 98
A+L +EGSFD A+ GC GVFH A+P+ F S +P+
Sbjct: 63 ADLADEGSFDEAIQGCSGVFHVATPMDFESRDPE 96
|
Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Pyrus communis (taxid: 23211) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Query: 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLF 63
+G + V VTGASGFV SWLV LLQ GYTV+ATVRDP N KT+ L EL GA ERL ++
Sbjct: 2 DGNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIW 61
Query: 64 KANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQ 98
KA+L E+GSF+ A+ GC GVFH A+P+ F S +P+
Sbjct: 62 KADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 96
|
Hordeum vulgare (taxid: 4513) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 258 | ||||||
| 359487115 | 259 | PREDICTED: bifunctional dihydroflavonol | 0.984 | 0.980 | 0.642 | 7e-89 | |
| 147783128 | 324 | hypothetical protein VITISV_011013 [Viti | 0.992 | 0.790 | 0.513 | 4e-78 | |
| 297736314 | 326 | unnamed protein product [Vitis vinifera] | 0.992 | 0.785 | 0.486 | 7e-72 | |
| 30697406 | 319 | Rossmann-fold NAD(P)-binding domain-cont | 0.984 | 0.796 | 0.475 | 1e-69 | |
| 82655175 | 325 | cinnamyl alcohol dehydrogenase [Quercus | 0.992 | 0.787 | 0.466 | 2e-69 | |
| 225470855 | 326 | PREDICTED: bifunctional dihydroflavonol | 0.992 | 0.785 | 0.480 | 2e-69 | |
| 225470851 | 326 | PREDICTED: bifunctional dihydroflavonol | 0.992 | 0.785 | 0.480 | 3e-69 | |
| 157365234 | 301 | cinnamyl alcohol dehydrogenase 2 [Eriobo | 0.895 | 0.767 | 0.498 | 8e-69 | |
| 37029996 | 326 | NADPH-dependent cinnamyl alcohol dehydro | 0.988 | 0.782 | 0.464 | 1e-68 | |
| 359486990 | 323 | PREDICTED: LOW QUALITY PROTEIN: bifuncti | 0.976 | 0.780 | 0.480 | 3e-68 |
| >gi|359487115|ref|XP_003633518.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 165/257 (64%), Positives = 196/257 (76%), Gaps = 3/257 (1%)
Query: 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERLHLF 63
+G+ KVVCVTGASG++ASWLVKLLLQRGYTVKATVRDPN PK TEHL L+GA ERLHLF
Sbjct: 2 DGQGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALEGAKERLHLF 61
Query: 64 KANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDL 123
KANLLEEGSFDS VDGCDGVFHTASPV+ + D+PQ WY L+KTLAEEAAWKFAKENGID+
Sbjct: 62 KANLLEEGSFDSVVDGCDGVFHTASPVVLIVDDPQLWYMLSKTLAEEAAWKFAKENGIDM 121
Query: 124 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKAS 183
V I+PG VIGP QP LN E +L L+ GD + +V++RDV AHI+A E+ A
Sbjct: 122 VTINPGWVIGPLLQPTLNLSVEEVLKLLKGDIFPNKTHRWVDVRDVAMAHIQAYELSTAR 181
Query: 184 GRYLLAGSVAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERAKSLGINFTPWE 241
GRY L GS+ S+ +K LR+ YP L K +E Y+PT VSQE+ KSLGI+FTP E
Sbjct: 182 GRYCLVGSILHCSETMKILRKLYPALNLPEKCADDEPYEPTYMVSQEKTKSLGIDFTPLE 241
Query: 242 VGVRGCIESLMEKGFLS 258
V ++ +ESL EK F+S
Sbjct: 242 VSMKDTVESLREKNFVS 258
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147783128|emb|CAN62117.1| hypothetical protein VITISV_011013 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/325 (51%), Positives = 196/325 (60%), Gaps = 69/325 (21%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP------------------ 42
M GEG KVVCVTGASGF+ASWLVKLLLQ YTVKATVRDP
Sbjct: 1 MSCGEG--KVVCVTGASGFIASWLVKLLLQHDYTVKATVRDPSRFSISTLNLQGHSDLYM 58
Query: 43 ------------------NSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84
+ KT+HL LDGA ERLHLFKA+LLEEGSFDS VDGCDGVF
Sbjct: 59 LPFNSLVVLTYICIYATDDPKKTQHLLSLDGAKERLHLFKADLLEEGSFDSVVDGCDGVF 118
Query: 85 HTASPVIFLSDNPQE----------------------------WYSLAKTLAEEAAWKFA 116
HTASPV NPQ WY L+KTLAEEAAWKF+
Sbjct: 119 HTASPVAMDVVNPQAELIDPALKGTINVLRSCAKFPSVKRVVLWYVLSKTLAEEAAWKFS 178
Query: 117 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIR 175
KENGID+V I+P VIGP QP LN AEV+LNLING Q+F Y V++RDV AHI+
Sbjct: 179 KENGIDMVTINPAWVIGPLIQPTLNLSAEVVLNLINGAQTFPNRSYRLVDVRDVANAHIQ 238
Query: 176 ALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERAKSL 233
A E+P+ASGRY L +S+ +K LR+ YP L K ++ Y P+ +VSQE+ KSL
Sbjct: 239 AYEIPEASGRYCLVEKDLHYSETVKILRKLYPELPLPEKCADDKPYAPSSRVSQEKVKSL 298
Query: 234 GINFTPWEVGVRGCIESLMEKGFLS 258
GI+FTP EV ++ +ESL EK F+S
Sbjct: 299 GIHFTPLEVSLKDTVESLKEKNFVS 323
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736314|emb|CBI24952.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 159/327 (48%), Positives = 186/327 (56%), Gaps = 71/327 (21%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATER 59
M GEG KVVCVTGASGF+ASWLVKLLLQ YTVKATVRDPN PK T+HL LDGA ER
Sbjct: 1 MSCGEG--KVVCVTGASGFIASWLVKLLLQHDYTVKATVRDPNDPKKTQHLLSLDGAKER 58
Query: 60 LHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQ--------------------- 98
LHLFKA+LLEEGSFDS VDGCDGVFHTASPV NPQ
Sbjct: 59 LHLFKADLLEEGSFDSVVDGCDGVFHTASPVAMDVVNPQAELIDPALKGTINVLRSCAKF 118
Query: 99 ------------------------------EWYSLAKTLAEEAAW-------------KF 115
W+S E W KF
Sbjct: 119 PSVKRVVVTSSMAAVVFTGKPLTSEVLIDESWFSDPVLCKESKLWYVLSKTLAEEAAWKF 178
Query: 116 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING--DQSFAFPYIFVEIRDVVYAH 173
+KENGID+V I+P VIGP QP LN AEV+LNLIN Q Y V++RDV AH
Sbjct: 179 SKENGIDMVTINPAWVIGPLIQPTLNLSAEVVLNLINDTLQQLMKISYRLVDVRDVANAH 238
Query: 174 IRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERAK 231
I+A E+P+ASGRY L +S+ +K LR+ YP L K ++ Y P+ +VSQE+ K
Sbjct: 239 IQAYEIPEASGRYCLVEKDLHYSETVKILRKLYPELPLPEKCADDKPYAPSSRVSQEKVK 298
Query: 232 SLGINFTPWEVGVRGCIESLMEKGFLS 258
SLGI+FTP EV ++ +ESL EK F+S
Sbjct: 299 SLGIHFTPLEVSLKDTVESLKEKNFVS 325
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30697406|ref|NP_176852.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332196436|gb|AEE34557.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/320 (47%), Positives = 190/320 (59%), Gaps = 66/320 (20%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERL 60
M+GEG KVVCVTGASG++ASW+VKLLL RGYTV+ATVR+P ++ KT HL L+GA+ERL
Sbjct: 1 MNGEG--KVVCVTGASGYIASWIVKLLLLRGYTVRATVRNPMDTKKTNHLLTLEGASERL 58
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIF---------------------------- 92
LFK++LLEEGSFD A++GCDGVFHTASPV
Sbjct: 59 KLFKSDLLEEGSFDQAIEGCDGVFHTASPVSLTVTDPQTEMIDPAVNGTLNVLRTCAKVS 118
Query: 93 --------------LSDNPQE------------------WYSLAKTLAEEAAWKFAKENG 120
LS NP + WY +KTLAEE AW+FAKENG
Sbjct: 119 SVKRVIVTSSTAATLSINPNDVVDETVFTDLSVYLAMKAWYGYSKTLAEETAWRFAKENG 178
Query: 121 IDLVAIHPGTVIGPFFQPILNFGAEVILNLING-DQSFAFPYIFVEIRDVVYAHIRALEV 179
IDLV ++PG VIGP QP LN+ EVI++LING + S +F Y F+++RDV AHI+A EV
Sbjct: 179 IDLVVMNPGNVIGPVLQPTLNYSVEVIVDLINGKNPSNSFYYRFMDVRDVSLAHIKAFEV 238
Query: 180 PKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKY--QPTIKVSQERAKSLGINF 237
P ASGRY+LA DI K L E +P L R K E + KV ++ KSLGI F
Sbjct: 239 PSASGRYILADPDVTMKDIQKLLHELFPDLCRVDKDNENEVGEMAYKVCVDKLKSLGIEF 298
Query: 238 TPWEVGVRGCIESLMEKGFL 257
TP + ++ + SL E+ L
Sbjct: 299 TPIKESLKDTVVSLKERCLL 318
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|82655175|emb|CAJ43901.1| cinnamyl alcohol dehydrogenase [Quercus ilex] | Back alignment and taxonomy information |
|---|
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/326 (46%), Positives = 189/326 (57%), Gaps = 70/326 (21%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATER 59
M SG G K+VCVTGASG++ASWLVKLLL RGYTVKA+VRDPN PK T HL+ LDGA ER
Sbjct: 1 MSSGAG--KIVCVTGASGYIASWLVKLLLNRGYTVKASVRDPNDPKKTNHLQVLDGAKER 58
Query: 60 LHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNP---------------------- 97
LHLFKANLLEEGSFDSAV+GCDGVFHTASP+ +P
Sbjct: 59 LHLFKANLLEEGSFDSAVEGCDGVFHTASPLYHNVTDPEAELLEPAVKGTLNVLNSCAKF 118
Query: 98 -----------------------------QEWYSLAKTLAEEAAW-------------KF 115
+ W+S E W KF
Sbjct: 119 PSVKRXVVTSSMAAVHYNKKAKTPDVVVDETWFSDPDLCKETKQWYMLSKTLAEENAWKF 178
Query: 116 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHI 174
AKE GID+V I+P VIGP QP LN A ILNLING Q+F + +V ++DV AHI
Sbjct: 179 AKEKGIDIVTINPAMVIGPXLQPTLNTSAAAILNLINGAQTFPNVSFGWVNVKDVANAHI 238
Query: 175 RALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERAKS 232
+A E+P ASGRY L SV S++++ LR+ YP+L K ++ + PT +VS+ER +S
Sbjct: 239 QAYEIPTASGRYCLVESVIHQSEVVRVLRKLYPSLQLPEKCADDKPFAPTYQVSKERTRS 298
Query: 233 LGINFTPWEVGVRGCIESLMEKGFLS 258
LGI + P+EV ++ +ESL EK F+S
Sbjct: 299 LGIEYIPFEVSLKETVESLKEKKFVS 324
|
Source: Quercus ilex Species: Quercus ilex Genus: Quercus Family: Fagaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225470855|ref|XP_002268322.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|298205076|emb|CBI40597.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/327 (48%), Positives = 189/327 (57%), Gaps = 71/327 (21%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATER 59
M +GEG KVVCVTGA+GFVASWLVKLLLQRGYTV+ATVRDPN PK TEHL LDGA ER
Sbjct: 1 MSTGEG--KVVCVTGAAGFVASWLVKLLLQRGYTVRATVRDPNDPKKTEHLLSLDGAKER 58
Query: 60 LHLFKANLLEEGSF-----------------------------DSAVDGCDGVFHTASPV 90
L LFKA+LLEEGSF D A+ G V + S V
Sbjct: 59 LRLFKADLLEEGSFDPVVDGCDGVFHTASPVVMQVTDPQTELIDPALKGTINVLRSCSKV 118
Query: 91 -----------------------------------IFLSDNPQEWYSLAKTLAEEAAWKF 115
L + WY L+KTLAEEAAWKF
Sbjct: 119 PSVKRVVVTSSMSAVEQNGKPLTPEVIIDESWFSDAVLCKESKLWYKLSKTLAEEAAWKF 178
Query: 116 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF--AFPYIFVEIRDVVYAH 173
+KENGID+V I+PG V+GP QP LN E IL L+NG Q+F Y +V+ RDV AH
Sbjct: 179 SKENGIDMVMINPGWVLGPLLQPTLNLSVEEILKLLNGVQTFPKTTSYTWVDARDVANAH 238
Query: 174 IRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQ--PTIKVSQERAK 231
I+A E+P+ASGRY L G+V+ S+ L L + YP + K E+ PT +VSQE+AK
Sbjct: 239 IQAFELPEASGRYCLVGTVSHRSETLNILHKLYPAIHIPEKWEDGQTCVPTFRVSQEKAK 298
Query: 232 SLGINFTPWEVGVRGCIESLMEKGFLS 258
SLGI+FTP EV ++ +ESL EK F+S
Sbjct: 299 SLGIHFTPLEVSIKDTVESLKEKNFIS 325
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225470851|ref|XP_002268122.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|298205080|emb|CBI40601.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/327 (48%), Positives = 189/327 (57%), Gaps = 71/327 (21%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATER 59
M +GEG KVVCVTGA+GFVASWLVKLLLQRGYTV+ATVRDPN PK TEHL LDGA ER
Sbjct: 1 MSTGEG--KVVCVTGAAGFVASWLVKLLLQRGYTVRATVRDPNDPKKTEHLLSLDGAKER 58
Query: 60 LHLFKANLLEEGSF-----------------------------DSAVDGCDGVFHTASPV 90
L LFKA+LLEEGSF D A+ G V + S V
Sbjct: 59 LRLFKADLLEEGSFDPVVDGCDGVFHTASPVVMQVTDPQTELIDPALKGTINVLRSCSKV 118
Query: 91 -----------------------------------IFLSDNPQEWYSLAKTLAEEAAWKF 115
L + WY L+KTLAEEAAWKF
Sbjct: 119 PSVKRVVVTSSMSAVEQNGKPLTPEVIIDESWFSDAVLCKESKLWYKLSKTLAEEAAWKF 178
Query: 116 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF--AFPYIFVEIRDVVYAH 173
+KENGID+V I+PG V+GP QP LN E IL L+NG Q+F Y +V+ RDV AH
Sbjct: 179 SKENGIDMVMINPGWVLGPLLQPTLNLSVEEILKLLNGVQTFPKTTSYTWVDARDVANAH 238
Query: 174 IRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQ--PTIKVSQERAK 231
I+A E+P+ASGRY L G+V+ S+ L L + YP + K E+ PT +VSQE+AK
Sbjct: 239 IQAFELPEASGRYCLVGTVSHRSETLNILHKLYPAIHIPEKWEDGQTCVPTFRVSQEKAK 298
Query: 232 SLGINFTPWEVGVRGCIESLMEKGFLS 258
SLGI+FTP EV ++ +ESL EK F+S
Sbjct: 299 SLGIHFTPLEVSMKDTVESLKEKNFIS 325
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157365234|gb|ABV44811.1| cinnamyl alcohol dehydrogenase 2 [Eriobotrya japonica] | Back alignment and taxonomy information |
|---|
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 151/303 (49%), Positives = 176/303 (58%), Gaps = 72/303 (23%)
Query: 23 WLVKLLLQRGYTVKATVRDPN-SPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81
WLVKLLLQ+GYTVKATVRDPN + KTEHL LDGA ERLHLFKA+LLEEGSFD+ +DGC
Sbjct: 1 WLVKLLLQKGYTVKATVRDPNDAKKTEHLLSLDGAKERLHLFKADLLEEGSFDAVIDGCV 60
Query: 82 GVFHTASPVIFLSDNPQ------------------------------------------- 98
GVFHTASP F + +PQ
Sbjct: 61 GVFHTASPAQFSATDPQVEIIEPAVKGTLNVLKSCAKFPAVKRVVLTSSLASVRLSGKPL 120
Query: 99 --------EWYS-------------LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 137
WYS L+KTLAEEAAWKFAK NGIDLV IHPG VIGP Q
Sbjct: 121 TSDVVMDETWYSDPLFCKEIKQWYPLSKTLAEEAAWKFAKGNGIDLVTIHPGIVIGPLLQ 180
Query: 138 PILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSD 197
P LN E +LNL++G ++ Y FV++RDV +AHI+A EVP ASGRY L VA D
Sbjct: 181 PTLNLSVEFLLNLMSGIETPFVNYAFVDVRDVAFAHIQAFEVPSASGRYCLVAQVADAPD 240
Query: 198 ILKFLREHYPTLLRSGKLEEKYQPT---IKVSQERAKSLGINFTPWEVGVRGCIESLMEK 254
LK +RE YPTL L E P+ +VS+E+AK LGI F P E ++ +ESLM K
Sbjct: 241 TLKIIRELYPTL----SLCEPGNPSGSKFQVSREKAKCLGITFLPLETSLKDTVESLMGK 296
Query: 255 GFL 257
GFL
Sbjct: 297 GFL 299
|
Source: Eriobotrya japonica Species: Eriobotrya japonica Genus: Eriobotrya Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|37029996|gb|AAQ88099.1| NADPH-dependent cinnamyl alcohol dehydrogenase [Quercus suber] gi|82655173|emb|CAJ43900.1| cinnamyl alcohol dehydrogenase [Quercus suber] | Back alignment and taxonomy information |
|---|
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/327 (46%), Positives = 188/327 (57%), Gaps = 72/327 (22%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN-SPKTEHLRELDGATERL 60
MSG G K+VCVTGASG++ASWLVKLLL RGYTVKA+VRDPN S KT HL+ LDGA ERL
Sbjct: 1 MSG-GAGKIVCVTGASGYIASWLVKLLLNRGYTVKASVRDPNDSKKTNHLQVLDGAKERL 59
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNP----------------------- 97
HLFKANLLEEGSFDSAV+GCDGVFHTASP +P
Sbjct: 60 HLFKANLLEEGSFDSAVEGCDGVFHTASPFYHNVTDPEAELLEPAVKGTLNVLNSCAKFP 119
Query: 98 ----------------------------QEWYSLAKTLAEEAAW-------------KFA 116
+ W+S E W KFA
Sbjct: 120 SVKRVVVTSSMAAVHCNKKAKAPDVVVDETWFSDPDVCKETKQWYMLSKTLAEENVWKFA 179
Query: 117 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI---FVEIRDVVYAH 173
KE GID+V I+P VIGP QP LN A ILNLING FP + +V ++DV AH
Sbjct: 180 KEKGIDIVTINPAMVIGPLLQPTLNTSAAAILNLINGTHQ-TFPNVAFGWVNVKDVANAH 238
Query: 174 IRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERAK 231
I+A E+P ASGRY L SV HS++++ LR+ YP++ K ++ + PT +VS+ER +
Sbjct: 239 IQAYEIPTASGRYCLVESVIHHSEVVRVLRKLYPSVQLPEKCADDKPFAPTYQVSKERTR 298
Query: 232 SLGINFTPWEVGVRGCIESLMEKGFLS 258
SLGI + P+EV ++ +ESL EK F+S
Sbjct: 299 SLGIEYIPFEVSLKETVESLKEKKFIS 325
|
Source: Quercus suber Species: Quercus suber Genus: Quercus Family: Fagaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359486990|ref|XP_003633502.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/327 (48%), Positives = 195/327 (59%), Gaps = 75/327 (22%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERL 60
MSGEG KVV VTGASGF+ASWLVKLLLQ YTVKATVRDPN PK T+HL LDGA ERL
Sbjct: 1 MSGEG--KVVSVTGASGFIASWLVKLLLQHRYTVKATVRDPNDPKKTQHLLSLDGAQERL 58
Query: 61 HLFKANLLEEGSF----------------------------DSAVDGCDGVFHTASPV-- 90
HLFKA+LLEEGSF D A+ G V + S V
Sbjct: 59 HLFKADLLEEGSFDSVVDGCDGVHTASPVALEAINPQTELIDPALKGTINVLRSCSKVPS 118
Query: 91 ------------IFLSDNP---------------------QEWYSLAKTLAEEAAWKFAK 117
+ + P ++WY L+K +AEEAAW F+K
Sbjct: 119 VKRVVVTSSLASVLFTGEPVTPEVLIDESWFSDPVLCKESKQWYVLSK-IAEEAAWNFSK 177
Query: 118 ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI---FVEIRDVVYAHI 174
ENGID+V I+PG VIGP QP LN AE +LNLING Q+ FP I +V++RDV AHI
Sbjct: 178 ENGIDMVTINPGWVIGPLLQPTLNLSAEQVLNLINGAQT--FPNISSWWVDVRDVANAHI 235
Query: 175 RALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLL---RSGKLEEKYQPTIKVSQERAK 231
+A E+P+ASGRY L + +S+ILK LR+ YP L R ++++ Y P+ + SQE+AK
Sbjct: 236 QAYEIPEASGRYCLVEGIXHNSEILKILRKLYPGLPLPERXMRIDKPYAPSSRASQEKAK 295
Query: 232 SLGINFTPWEVGVRGCIESLMEKGFLS 258
SLGI+FTP EV ++ +ESL EK F+S
Sbjct: 296 SLGIHFTPLEVSLKDTVESLKEKNFVS 322
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 258 | ||||||
| TAIR|locus:2150315 | 326 | AT5G19440 [Arabidopsis thalian | 0.635 | 0.503 | 0.497 | 1.4e-74 | |
| TAIR|locus:2033904 | 325 | AT1G51410 [Arabidopsis thalian | 0.612 | 0.486 | 0.496 | 3.2e-73 | |
| TAIR|locus:2033394 | 319 | AT1G66800 [Arabidopsis thalian | 0.612 | 0.495 | 0.509 | 1.8e-70 | |
| TAIR|locus:2012250 | 369 | AT1G09480 [Arabidopsis thalian | 0.701 | 0.490 | 0.445 | 1.8e-68 | |
| TAIR|locus:2012315 | 322 | AT1G09510 [Arabidopsis thalian | 0.600 | 0.481 | 0.493 | 4.2e-67 | |
| TAIR|locus:2012265 | 322 | AT1G09490 [Arabidopsis thalian | 0.348 | 0.279 | 0.747 | 8.7e-67 | |
| TAIR|locus:2012280 | 325 | AT1G09500 [Arabidopsis thalian | 0.674 | 0.535 | 0.439 | 2e-65 | |
| TAIR|locus:2200427 | 344 | CCR1 "cinnamoyl coa reductase | 0.341 | 0.255 | 0.615 | 5.4e-55 | |
| TAIR|locus:2122093 | 326 | DRL1 "dihydroflavonol 4-reduct | 0.344 | 0.273 | 0.666 | 1.3e-53 | |
| TAIR|locus:2025832 | 332 | CCR2 "cinnamoyl coa reductase" | 0.337 | 0.262 | 0.611 | 1.8e-52 |
| TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 406 (148.0 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 83/167 (49%), Positives = 113/167 (67%)
Query: 93 LSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLIN 152
L + + WY L+KTLAE+AAWK AKE G+D+V I+P VIGP QP LN A ILNLIN
Sbjct: 157 LCEASKMWYVLSKTLAEDAAWKLAKEKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLIN 216
Query: 153 GDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTL-L 210
G ++F + +V ++DV AHI+A EVP A+GRY L V HS+I+ LRE YP L L
Sbjct: 217 GAKTFPNLSFGWVNVKDVANAHIQAFEVPSANGRYCLVERVVHHSEIVNILRELYPNLPL 276
Query: 211 RSGKLEEK-YQPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGF 256
++E Y PT +VS+++ +SLGI++ P +V ++ +ESL EKGF
Sbjct: 277 PERCVDENPYVPTYQVSKDKTRSLGIDYIPLKVSIKETVESLKEKGF 323
|
|
| TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 389 (142.0 bits), Expect = 3.2e-73, Sum P(2) = 3.2e-73
Identities = 80/161 (49%), Positives = 107/161 (66%)
Query: 100 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA- 158
WY L+KTLAE AAWKFAKEN + LV+I+P VIGP QP LN A +L+LI G Q+F
Sbjct: 163 WYVLSKTLAENAAWKFAKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTFPN 222
Query: 159 FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKL-EE 217
+ +V ++DV AHI+A E P A GRY L VA +S+++ L + YP K +E
Sbjct: 223 ATFGWVNVKDVANAHIQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDFQLPEKCADE 282
Query: 218 K-YQPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 257
K Y PT KVS+E+A+SLG+ F P EV ++ +ESL +KGF+
Sbjct: 283 KIYIPTYKVSKEKAESLGVEFVPLEVSIKETVESLRDKGFI 323
|
|
| TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 385 (140.6 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 82/161 (50%), Positives = 105/161 (65%)
Query: 100 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING-DQSFA 158
WY +KTLAEE AW+FAKENGIDLV ++PG VIGP QP LN+ EVI++LING + S +
Sbjct: 158 WYGYSKTLAEETAWRFAKENGIDLVVMNPGNVIGPVLQPTLNYSVEVIVDLINGKNPSNS 217
Query: 159 FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEK 218
F Y F+++RDV AHI+A EVP ASGRY+LA DI K L E +P L R K E
Sbjct: 218 FYYRFMDVRDVSLAHIKAFEVPSASGRYILADPDVTMKDIQKLLHELFPDLCRVDKDNEN 277
Query: 219 Y--QPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 257
+ KV ++ KSLGI FTP + ++ + SL E+ L
Sbjct: 278 EVGEMAYKVCVDKLKSLGIEFTPIKESLKDTVVSLKERCLL 318
|
|
| TAIR|locus:2012250 AT1G09480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 375 (137.1 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 82/184 (44%), Positives = 109/184 (59%)
Query: 77 VDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF 136
V+ D V T L + WY L+K LAE AAW+FAK+NGID+V ++PG + GP
Sbjct: 186 VEASDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFIFGPLL 245
Query: 137 QPILNFGAEVILNLINGDQSFAFP-YIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQH 195
QP LNF E+I++ ING F Y FV++RDV AHI+ALE P A+GRY++ G +
Sbjct: 246 QPTLNFSVELIVDFINGKNPFNSRFYRFVDVRDVALAHIKALETPSANGRYIIDGPIMSV 305
Query: 196 SDILKFLREHYPTLLRSGKLEEKYQPTI--KVSQERAKSLGINFTPWEVGVRGCIESLME 253
SDI+ LRE P L + EE + KV E+ K+LG+ FTP + +R I SL E
Sbjct: 306 SDIIDILRELLPDLCIADTNEESVMNEMLCKVCVEKVKNLGVEFTPMKSSLRDTIVSLKE 365
Query: 254 KGFL 257
K L
Sbjct: 366 KCLL 369
|
|
| TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 366 (133.9 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 78/158 (49%), Positives = 101/158 (63%)
Query: 100 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAF 159
WY+L+KTLAE+ AW+FAKE G+DLV I+PG V+GP +P L F VI+ LI G +F
Sbjct: 162 WYALSKTLAEDEAWRFAKEKGLDLVVINPGLVLGPLLKPSLTFSVNVIVELITGKDNFIN 221
Query: 160 P-YIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE-E 217
+ V++RDV AHI+A E P A+GRY++ G V +DI K LRE +P L K E
Sbjct: 222 KDFRLVDVRDVALAHIKAFETPSANGRYIIEGPVVTINDIEKILREFFPDLNLGNKGEAS 281
Query: 218 KYQPTI-KVSQERAKSLGINFTPWEVGVRGCIESLMEK 254
+ P I K+ E+ KSLGI FTP E +R I SL EK
Sbjct: 282 EIIPVIYKLCVEKVKSLGIEFTPTEATLRDTILSLKEK 319
|
|
| TAIR|locus:2012265 AT1G09490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 349 (127.9 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
Identities = 68/91 (74%), Positives = 76/91 (83%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANL 67
KVVCVTGASG++ASW+VKLLL RGYTV ATVRDP + KTEHL LDGA ERL LFKA+L
Sbjct: 6 KVVCVTGASGYIASWIVKLLLLRGYTVNATVRDPKDKKKTEHLLALDGAKERLKLFKADL 65
Query: 68 LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQ 98
LEE SFD A+DGCD VFHTASPV+F +PQ
Sbjct: 66 LEESSFDQAIDGCDAVFHTASPVLFTVTDPQ 96
|
|
| TAIR|locus:2012280 AT1G09500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 361 (132.1 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 80/182 (43%), Positives = 109/182 (59%)
Query: 78 DGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 137
D D F T +P ++ ++WY L+KTLAE+AAW+FAK+N IDL+ ++PG V GP Q
Sbjct: 144 DVVDETFFT-NPSF--AEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQ 200
Query: 138 PILNFGAEVILNLINGDQSF-AFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHS 196
P LNF VI+ L+ G F + FV++RDV AH++ALE P A+GRY++ G V
Sbjct: 201 PTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALETPSANGRYIIDGPVVTIK 260
Query: 197 DILKFLREHYPTLL---RSGKLEEKYQPTIKVSQERAKSLGI-NFTPWEVGVRGCIESLM 252
DI LRE +P L R+ + E T V ++ KSLGI FTP E +R + SL
Sbjct: 261 DIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLK 320
Query: 253 EK 254
EK
Sbjct: 321 EK 322
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| TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 302 (111.4 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 56/91 (61%), Positives = 73/91 (80%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K VCVTGA G++ASW+VK+LL+RGYTVK TVR+P+ PK HLREL+G ERL L KA+L
Sbjct: 11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQ 70
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQE 99
+ + +A+DGCDGVFHTASPV +D+P++
Sbjct: 71 DYEALKAAIDGCDGVFHTASPV---TDDPEQ 98
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| TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 299 (110.3 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 60/90 (66%), Positives = 70/90 (77%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
VCVTGASGF+ASWLVK LL GY V TVRDP N K HL +L+GA ERL L KA+L+E
Sbjct: 8 VCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLVKADLME 67
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQE 99
EGSFD+A+ GC GVFHTASPV+ + NP+E
Sbjct: 68 EGSFDNAIMGCQGVFHTASPVLKPTSNPEE 97
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| TAIR|locus:2025832 CCR2 "cinnamoyl coa reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 297 (109.6 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 55/90 (61%), Positives = 71/90 (78%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K+VCVTGA G++ASW+VKLLL+RGYTV+ TVR+P PK HLREL GA ERL L A+LL
Sbjct: 6 KLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKERLTLHSADLL 65
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQ 98
+ + + +DGCDGVFHTASP ++D+P+
Sbjct: 66 DYEALCATIDGCDGVFHTASP---MTDDPE 92
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | CCRL1 | cinnamoyl CoA reductase-like protein (EC-1.1.1.195) (322 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | CYP703A4 | cytochrome P450 (487 aa) | • | 0.690 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 258 | |||
| PLN02986 | 322 | PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase | 8e-77 | |
| PLN02662 | 322 | PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase | 3e-76 | |
| PLN02989 | 325 | PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase | 4e-72 | |
| PLN02662 | 322 | PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase | 2e-62 | |
| PLN02650 | 351 | PLN02650, PLN02650, dihydroflavonol-4-reductase | 1e-55 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 2e-52 | |
| PLN02214 | 342 | PLN02214, PLN02214, cinnamoyl-CoA reductase | 4e-51 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 4e-45 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 7e-43 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 3e-41 | |
| PLN02896 | 353 | PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | 1e-31 | |
| PLN00198 | 338 | PLN00198, PLN00198, anthocyanidin reductase; Provi | 9e-26 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 6e-24 | |
| PLN02896 | 353 | PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | 4e-23 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 2e-20 | |
| PLN00198 | 338 | PLN00198, PLN00198, anthocyanidin reductase; Provi | 1e-17 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 5e-16 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 2e-15 | |
| PLN02583 | 297 | PLN02583, PLN02583, cinnamoyl-CoA reductase | 3e-15 | |
| PLN02583 | 297 | PLN02583, PLN02583, cinnamoyl-CoA reductase | 2e-13 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 6e-13 | |
| PLN02686 | 367 | PLN02686, PLN02686, cinnamoyl-CoA reductase | 1e-11 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 2e-10 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 1e-09 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 1e-09 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 7e-09 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 2e-08 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 3e-08 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 3e-08 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 4e-08 | |
| cd05280 | 325 | cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ | 5e-08 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 5e-08 | |
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 1e-07 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 1e-07 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 4e-07 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 6e-07 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 7e-07 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 3e-06 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 3e-06 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 5e-06 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 6e-06 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 7e-06 | |
| COG1089 | 345 | COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve | 8e-06 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 1e-05 | |
| TIGR02823 | 323 | TIGR02823, oxido_YhdH, putative quinone oxidoreduc | 2e-05 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 2e-05 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 7e-05 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 7e-05 | |
| cd05229 | 302 | cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | 8e-05 | |
| PLN02653 | 340 | PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | 9e-05 | |
| PLN02657 | 390 | PLN02657, PLN02657, 3,8-divinyl protochlorophyllid | 1e-04 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 2e-04 | |
| cd08288 | 324 | cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu | 2e-04 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 3e-04 | |
| PLN02695 | 370 | PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | 3e-04 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 4e-04 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 9e-04 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 9e-04 | |
| PLN02427 | 386 | PLN02427, PLN02427, UDP-apiose/xylose synthase | 9e-04 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 0.001 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 0.001 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 0.001 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 0.002 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 0.002 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 0.002 | |
| cd08289 | 326 | cd08289, MDR_yhfp_like, Yhfp putative quinone oxid | 0.002 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 0.002 | |
| COG2910 | 211 | COG2910, COG2910, Putative NADH-flavin reductase [ | 0.002 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 0.003 |
| >gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 235 bits (600), Expect = 8e-77
Identities = 139/324 (42%), Positives = 178/324 (54%), Gaps = 70/324 (21%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERL 60
M+G G K+VCVTGASG++ASW+VKLLL RGYTVKATVRD + KTEHL LDGA ERL
Sbjct: 1 MNGGG--KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERL 58
Query: 61 HLFKANLLEEGSF-----------------------------DSAVDGCDGVFHT----- 86
LFKA+LLEE SF D A+ G V +T
Sbjct: 59 KLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETP 118
Query: 87 ----------------------ASPVI---FLSD-----NPQEWYSLAKTLAEEAAWKFA 116
A+ V+ F SD + WY L+K LAE AAW+FA
Sbjct: 119 SVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFA 178
Query: 117 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF-AFPYIFVEIRDVVYAHIR 175
K+NGID+V ++PG + GP QP LNF E+I++ ING F Y FV++RDV AHI+
Sbjct: 179 KDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIK 238
Query: 176 ALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTI--KVSQERAKSL 233
ALE P A+GRY++ G + +DI+ LRE +P L + EE + KV E+ K+L
Sbjct: 239 ALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEMNEMICKVCVEKVKNL 298
Query: 234 GINFTPWEVGVRGCIESLMEKGFL 257
G+ FTP + +R I SL EK L
Sbjct: 299 GVEFTPMKSSLRDTILSLKEKCLL 322
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Length = 322 |
| >gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 233 bits (597), Expect = 3e-76
Identities = 97/168 (57%), Positives = 118/168 (70%), Gaps = 11/168 (6%)
Query: 98 QEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF 157
+ WY L+KTLAEEAAWKFAKENGID+V I+P VIGP QP LN AE ILNLING Q+F
Sbjct: 159 KLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTF 218
Query: 158 A-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE 216
Y +V++RDV AHI+A E+P ASGRY L V +S+++K L E YPTL +L
Sbjct: 219 PNASYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTL----QLP 274
Query: 217 EK------YQPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 258
EK Y PT +VS+E+AKSLGI F P EV ++ +ESL EKGFLS
Sbjct: 275 EKCADDKPYVPTYQVSKEKAKSLGIEFIPLEVSLKDTVESLKEKGFLS 322
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Length = 322 |
| >gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 223 bits (569), Expect = 4e-72
Identities = 131/317 (41%), Positives = 169/317 (53%), Gaps = 71/317 (22%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS-PKTEHLRELDGATERLHLFKANL 67
KVVCVTGASG++ASW+VKLLL RGYT+ ATVRDP KT+HL LDGA ERL LFKA+L
Sbjct: 6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADL 65
Query: 68 LEEGSF------------------------------DSAVDGCDGVFHTASPV------- 90
L+EGSF + AV+G V T + V
Sbjct: 66 LDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVI 125
Query: 91 -----------------------IFLSD-----NPQEWYSLAKTLAEEAAWKFAKENGID 122
F ++ ++WY L+KTLAE+AAW+FAK+N ID
Sbjct: 126 LTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEID 185
Query: 123 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF-AFPYIFVEIRDVVYAHIRALEVPK 181
L+ ++PG V GP QP LNF VI+ L+ G F + FV++RDV AH++ALE P
Sbjct: 186 LIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALETPS 245
Query: 182 ASGRYLLAGSVAQHSDILKFLREHYPTLL---RSGKLEEKYQPTIKVSQERAKSLGI-NF 237
A+GRY++ G V DI LRE +P L R+ + E T V ++ KSLGI F
Sbjct: 246 ANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGIIEF 305
Query: 238 TPWEVGVRGCIESLMEK 254
TP E +R + SL EK
Sbjct: 306 TPTETSLRDTVLSLKEK 322
|
Length = 325 |
| >gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 2e-62
Identities = 77/95 (81%), Positives = 81/95 (85%), Gaps = 1/95 (1%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLHLFK 64
GE KVVCVTGASG++ASWLVKLLLQRGYTVKATVRDPN P KTEHL LDGA ERLHLFK
Sbjct: 2 GEGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFK 61
Query: 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQE 99
ANLLEEGSFDS VDGC+GVFHTASP +PQ
Sbjct: 62 ANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQA 96
|
Length = 322 |
| >gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Score = 181 bits (461), Expect = 1e-55
Identities = 115/326 (35%), Positives = 156/326 (47%), Gaps = 73/326 (22%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHL 62
+++ VCVTGASGF+ SWLV LL+RGYTV+ATVRDP N K +HL +L GAT RL L
Sbjct: 1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTL 60
Query: 63 FKANLLEEGSFDSAVDGCDGV--------FHTASP------------------------- 89
+KA+L EGSFD A+ GC GV F + P
Sbjct: 61 WKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTV 120
Query: 90 --VIFLSD----NPQEW-------------------------YSLAKTLAEEAAWKFAKE 118
++F S N +E Y ++KTLAE+AAWK+A E
Sbjct: 121 RRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE 180
Query: 119 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ---SFAFPYIFVEIRDVVYAHIR 175
NG+D ++I P V+GPF + L+LI G++ S FV + D+ AHI
Sbjct: 181 NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIF 240
Query: 176 ALEVPKASGRYLLAGSVAQHSDILKFLREHYPTL---LRSGKLEEKYQPTIKVSQERAKS 232
E P A GRY+ + A D+ K LRE YP R ++E + ++ S ++
Sbjct: 241 LFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKS-VEFSSKKLTD 299
Query: 233 LGINFT-PWEVGVRGCIESLMEKGFL 257
LG F E G IE+ EKG +
Sbjct: 300 LGFTFKYSLEDMFDGAIETCREKGLI 325
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Length = 351 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 171 bits (437), Expect = 2e-52
Identities = 65/90 (72%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
VCVTGASGF+ SWLVK LLQRGYTV+ATVRDP + K HL EL+GA ERL LFKA+LL+
Sbjct: 1 VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLD 60
Query: 70 EGSFDSAVDGCDGVFHTASPVIFLSDNPQE 99
GSFD+A+DGCDGVFH ASPV F S++P+E
Sbjct: 61 YGSFDAAIDGCDGVFHVASPVDFDSEDPEE 90
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This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 4e-51
Identities = 108/313 (34%), Positives = 160/313 (51%), Gaps = 63/313 (20%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K VCVTGA G++ASW+VK+LL+RGYTVK TVR+P+ PK HLREL+G ERL L KA+L
Sbjct: 11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQ 70
Query: 69 E-----------EGSF--------------DSAVDGCDGVFHTASP-----VIFLSD--- 95
+ +G F + AV+G V + A+ V+ S
Sbjct: 71 DYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGA 130
Query: 96 -------------------------NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130
N + WY K +AE+AAW+ AKE G+DLV ++P
Sbjct: 131 VYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVL 190
Query: 131 VIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLL 188
V+GP QP +N +L + G +++A +V++RDV AH+ E P ASGRYLL
Sbjct: 191 VLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGRYLL 250
Query: 189 AGSVAQHSDILKFLREHYPTLLRSGKLEEKYQP---TIKVSQERAKSLGINFTPWEVGVR 245
A S ++++ L + +P K +++ P K + ++ K LG+ FT + +
Sbjct: 251 AESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTSTKQSLY 310
Query: 246 GCIESLMEKGFLS 258
++SL EKG L+
Sbjct: 311 DTVKSLQEKGHLA 323
|
Length = 342 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 4e-45
Identities = 88/271 (32%), Positives = 119/271 (43%), Gaps = 72/271 (26%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
V VTGASGFVAS +V+ LL+RGY V+ATVRDP K HL +LD RL L A+L +
Sbjct: 1 VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60
Query: 70 EGSFD----------------------------SAVDGCDGVFHTASP------VIFLS- 94
E SFD A+ G A+ + S
Sbjct: 61 EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRFVLTSS 120
Query: 95 ---------------DNPQEW---------------YSLAKTLAEEAAWKFAKENGIDLV 124
+ + W Y+ +KTLAE+AAWKFA EN IDL+
Sbjct: 121 AGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADENNIDLI 180
Query: 125 AIHPGTVIGPFFQPILNFGAEVILNLINGDQ--SFAFPYI----FVEIRDVVYAHIRALE 178
+ P IG F + ++LI G++ S A I +V + D+ AHI LE
Sbjct: 181 TVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGYYVHVVDICLAHIGCLE 240
Query: 179 VPKASGRYLLAGSVAQHSDILKFLREHYPTL 209
+P A GRY+ + +LK LR+ YP+
Sbjct: 241 LPIARGRYICTAGNFDWNTLLKTLRKKYPSY 271
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 146 bits (372), Expect = 7e-43
Identities = 59/153 (38%), Positives = 89/153 (58%), Gaps = 9/153 (5%)
Query: 88 SPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVI 147
S + F + WY+L+KTLAE+AAW+FA+ENG+DLV ++P V+GPF QP LN +++I
Sbjct: 143 SDLDFCKKT-KLWYALSKTLAEKAAWEFAEENGLDLVTVNPSLVVGPFLQPSLNSSSQLI 201
Query: 148 LNLINGD----QSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLR 203
L+L+ G+ Q+ + V + DV AHI E P ASGRY+ + V ++ L
Sbjct: 202 LSLLKGNAEMYQNGSLAL--VHVDDVADAHILLYEKPSASGRYICSSHVVTRPELAALLA 259
Query: 204 EHYPTLLRSGKLEEKYQ--PTIKVSQERAKSLG 234
+ YP K E+ +K+S ++ K LG
Sbjct: 260 KKYPQYNIPTKFEDDQPGVARVKLSSKKLKDLG 292
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 3e-41
Identities = 84/296 (28%), Positives = 125/296 (42%), Gaps = 73/296 (24%)
Query: 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLL 68
+V VTGA+GF+AS +V+ LL+ GY V+ TVR S K + L + G +RL + L
Sbjct: 1 LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60
Query: 69 -EEGSFDS-----------------------------AVDGCDGVFHTA----------- 87
++D AV+G V A
Sbjct: 61 TAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVVL 120
Query: 88 ----SPVIFLSDNPQE-------W-------------YSLAKTLAEEAAWKFAKEN--GI 121
+ V + W Y +KTLAE+AAW+F KEN
Sbjct: 121 TSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENKPKF 180
Query: 122 DLVAIHPGTVIGP-FFQPILNFGAEVILNLINGDQSFA---FPYIFVEIRDVVYAHIRAL 177
+L+ I+PG V+GP LN E+I L++G P+ +V++RDV AH+RAL
Sbjct: 181 ELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPFGYVDVRDVADAHVRAL 240
Query: 178 EVPKASG-RYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKVSQERAKS 232
E P+A+G R++++ +I LRE +P L +I V + KS
Sbjct: 241 ESPEAAGQRFIVSAGPFSFQEIADLLREEFPQLTAPFPAPNPLMLSILVKFDNRKS 296
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 1e-31
Identities = 55/94 (58%), Positives = 65/94 (69%), Gaps = 5/94 (5%)
Query: 2 MSGEGEEK---VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE 58
M EG E CVTGA+G++ SWLVKLLLQRGYTV AT+RDP K+ HL +
Sbjct: 1 MELEGRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPA--KSLHLLSKWKEGD 58
Query: 59 RLHLFKANLLEEGSFDSAVDGCDGVFHTASPVIF 92
RL LF+A+L EEGSFD AV GCDGVFH A+ + F
Sbjct: 59 RLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEF 92
|
Length = 353 |
| >gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 9e-26
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANL 67
K CV G +GF+AS L+KLLLQ+GY V TVRDP N K HLR L + L +F A+L
Sbjct: 10 KTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGD-LKIFGADL 68
Query: 68 LEEGSFDSAVDGCDGVFHTASPVIFLSDNPQE 99
+E SF++ + GCD VFH A+PV F S++P+
Sbjct: 69 TDEESFEAPIAGCDLVFHVATPVNFASEDPEN 100
|
Length = 338 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 6e-24
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 69/236 (29%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VTGA+GF+ S LV+ LL +GY V+A VR LDG + + + +L + S
Sbjct: 3 VTGATGFLGSNLVRALLAQGYRVRALVRS-----GSDAVLLDG--LPVEVVEGDLTDAAS 55
Query: 73 FDSAVDGCDGVF----------------------------------------HTASPVIF 92
+A+ GCD VF HT+S
Sbjct: 56 LAAAMKGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSSIAAL 115
Query: 93 ------LSDNPQEW--------YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP 138
D W Y +K LAE + A E G+D+V ++P V GP
Sbjct: 116 GGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAE-GLDVVIVNPSAVFGP---G 171
Query: 139 ILNFGA--EVILNLINGDQSFAFP--YIFVEIRDVVYAHIRALEVPKASGRYLLAG 190
+ +L+ +NG P FV++RDV HI A+E + RY+L G
Sbjct: 172 DEGPTSTGLDVLDYLNGKLPAYPPGGTSFVDVRDVAEGHIAAMEKGRRGERYILGG 227
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 4e-23
Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 97 PQEW-YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ 155
W Y L+K L EEAA+K+AKENGIDLV++ TV GPF P + +V+L+ I GD
Sbjct: 171 ASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDS 230
Query: 156 SFAFPYI-----------FVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLRE 204
F + V I D+ AHI +E KA GRY+ S+++ L +
Sbjct: 231 KL-FSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSK 289
Query: 205 HYPTLLRSGKLEEKYQPTIK--VSQERAKSLGINF 237
YP +L+E+ + +I +S ++ + LG +
Sbjct: 290 EYPCSNIQVRLDEEKRGSIPSEISSKKLRDLGFEY 324
|
Length = 353 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 88.1 bits (218), Expect = 2e-20
Identities = 62/319 (19%), Positives = 106/319 (33%), Gaps = 87/319 (27%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VTG +GF+ S LV+ LL G+ V+ R + LD + +L +
Sbjct: 5 VTGGAGFIGSHLVERLLAAGHDVRGLDRLRDG--------LDPLLSGVEFVVLDLTDRDL 56
Query: 73 FDSAVDGC-DGVFHTASP------------------------------------VIFLS- 94
D G D V H A+ +F S
Sbjct: 57 VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASS 116
Query: 95 -------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 135
P Y ++K AE+ +A+ G+ +V + P V GP
Sbjct: 117 VSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPG 176
Query: 136 FQPILNFGAEVILN----------LINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR 185
+P L+ G +I GD S +++V DV A + ALE P G
Sbjct: 177 DKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYV--DDVADALLLALENPDG-GV 233
Query: 186 YLLAGSVAQHS--DILKFLREHYPTLLRSGKLEEK-----YQPTIKVSQERAK-SLGIN- 236
+ + A+ + ++ + + E + + + +A+ +LG
Sbjct: 234 FNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEP 293
Query: 237 FTPWEVGVRGCIESLMEKG 255
E G+ +E L++K
Sbjct: 294 KVSLEEGLADTLEWLLKKL 312
|
Length = 314 |
| >gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Score = 80.3 bits (198), Expect = 1e-17
Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 90 VIFL-SDNPQEW-YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP--------- 138
V FL S+ P W Y +KTLAE+AAWKFA+EN IDL+ + P + GP
Sbjct: 155 VEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLA 214
Query: 139 -ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSD 197
L G E ++N + G Q + + DV AHI E ASGRY+ + +
Sbjct: 215 MSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPE 274
Query: 198 ILKFLREHYP 207
+ KFL + YP
Sbjct: 275 LAKFLIKRYP 284
|
Length = 338 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 5e-16
Identities = 54/247 (21%), Positives = 78/247 (31%), Gaps = 82/247 (33%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ S LV+ LLQ GY V R S T R+ + +L +
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSE--------SLNTGRIRFHEGDLTDP 52
Query: 71 GSFDSAVDGC--DGVFHTA----------SPVIFLSDN---------------------- 96
+ + + D V H A P F+ N
Sbjct: 53 DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFA 112
Query: 97 ---------------------PQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 135
P Y+ AK AE +A+ G+ V + V GP
Sbjct: 113 SSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172
Query: 136 FQPILNFGAEVILNLI-------------NGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 182
F VI LI +G Q +++V+ DV A + ALE P
Sbjct: 173 --NPDPFVTHVIPALIRRILEGKPILLLGDGTQR--RDFLYVD--DVARAILLALEHPDG 226
Query: 183 SGRYLLA 189
Y +
Sbjct: 227 GEIYNIG 233
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 2e-15
Identities = 44/207 (21%), Positives = 71/207 (34%), Gaps = 44/207 (21%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVK------------ATVRDPNS---PKTEHLRELDG 55
+ VTG +GF+ S LV+ LL+RG+ V A V P S P + + G
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLDVVVHLAALVGVPASWDNPDEDFETNVVG 60
Query: 56 ATERLHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEW-----------YSLA 104
L + G + +S ++ S Y ++
Sbjct: 61 TLNLLEAARKA------------GVKRFVYASSASVYGSPEGLPEEEETPPRPLSPYGVS 108
Query: 105 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI-- 162
K AE + + G+ +V + V GP +P L+ + +
Sbjct: 109 KLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRALEGKPLTVFGGGN 168
Query: 163 ----FVEIRDVVYAHIRALEVPKASGR 185
F+ + DVV A + ALE P G
Sbjct: 169 QTRDFIHVDDVVRAILHALENPLEGGG 195
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 3e-15
Identities = 37/88 (42%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTE-HLRELDGATERLH 61
S + K VCV ASG+V WLVK LL RGYTV A V+ + E +R L ERL
Sbjct: 1 SFDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLK 60
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTASP 89
+F + L+ S A+ GC G+F P
Sbjct: 61 VFDVDPLDYHSILDALKGCSGLFCCFDP 88
|
Length = 297 |
| >gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 2e-13
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 100 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF---QPILNFGAEVILNLINGDQS 156
W++LAKTL+E+ AW A + G+++V+I+ G ++GP P L A++ N +
Sbjct: 162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGV----- 216
Query: 157 FAFPYIFVEIRDVVYAHIRALEVPKASGRYL-LAGSVAQHSDILKFLREHYPTLLRSGKL 215
+ V++ +V AHIRA E + GRYL V D +K + P +
Sbjct: 217 ----LVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPY 272
Query: 216 EEKYQPTIKVSQER 229
E Q + +V Q+R
Sbjct: 273 E--MQGS-EVYQQR 283
|
Length = 297 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 6e-13
Identities = 69/257 (26%), Positives = 99/257 (38%), Gaps = 73/257 (28%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
V VTGA+GFV S +V+LLL++G V+ VR P S + +L LD + + +L
Sbjct: 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVR-PTSDR-RNLEGLDV-----EIVEGDLR 53
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDL----- 123
+ S AV GC +FH A+ + +P+E Y+ A + A E G++
Sbjct: 54 DPASLRKAVAGCRALFHVAADYRLWAPDPEEMYA-ANVEGTRNLLRAALEAGVERVVYTS 112
Query: 124 -VAI----------------HPGTVIGPF----F---QPILNFGAE-----VILN----- 149
VA +IG + F Q L AE VI+N
Sbjct: 113 SVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPI 172
Query: 150 ----------------LINGDQSFAFP-YI-----FVEIRDVVYAHIRALEVPKASGRYL 187
+NG P Y+ V + DV H+ ALE + RY+
Sbjct: 173 GPRDIKPTPTGRIIVDFLNGK----MPAYVDTGLNLVHVDDVAEGHLLALERGRIGERYI 228
Query: 188 LAGSVAQHSDILKFLRE 204
L G IL L E
Sbjct: 229 LGGENLTLKQILDKLAE 245
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-11
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL--DGATERLH-- 61
E ++VCVTG F+ +V LL+ GY+V+ V E LRE+ G R +
Sbjct: 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQED--KEKLREMEMFGEMGRSNDG 108
Query: 62 --LFKANLLEEGSFDSAVDGCDGVFHTASPV 90
ANL E S A DGC GVFHT++ V
Sbjct: 109 IWTVMANLTEPESLHEAFDGCAGVFHTSAFV 139
|
Length = 367 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 2e-10
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V V GA+G V +V+ LL RGY V+A VRDP +L+ A + +L +
Sbjct: 2 VLVVGATGKVGRHVVRELLDRGYQVRALVRDP-----SQAEKLEAAG--AEVVVGDLTDA 54
Query: 71 GSFDSAVDGCDGVFHTAS 88
S +A++G D V A
Sbjct: 55 ESLAAALEGIDAVISAAG 72
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 1e-09
Identities = 52/247 (21%), Positives = 85/247 (34%), Gaps = 73/247 (29%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTGA GF+ S L + LL+ G+ V+A NS + L + +R H ++ +
Sbjct: 2 VLVTGADGFIGSHLTERLLREGHEVRALD-IYNSFNSWGLLDNAV-HDRFHFISGDVRDA 59
Query: 71 GSFDSAVDGCDGVFHTAS-----------------------------------PVIFLS- 94
+ V CD VFH A+ V+ S
Sbjct: 60 SEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHTST 119
Query: 95 ---------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133
+ P+ YS +K A+ A+ + + G+ + I P G
Sbjct: 120 SEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNTYG 179
Query: 134 PFFQPILNFGAEVI---------LNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 184
P Q +I +NL +G + F + ++D I L+ +A G
Sbjct: 180 P-RQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNF----VKDTARGFIDILDAIEAVG 234
Query: 185 RYLLAGS 191
+ GS
Sbjct: 235 EIINNGS 241
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 1e-09
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 13 VTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG 71
V GA+G +V+ LL+ G+ V+A RDP+SP + L A + + + +L +
Sbjct: 3 VFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKAL-----AAPGVEVVQGDLDDPE 57
Query: 72 SFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAA 112
S ++A+ G GVF + + E + K + + A
Sbjct: 58 SLEAALKGVYGVFLVTDF--WEAGGEDE-IAQGKNVVDAAK 95
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 7e-09
Identities = 60/270 (22%), Positives = 90/270 (33%), Gaps = 92/270 (34%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
V VTGA+GF+ LV LL RG V+ VR+ N+ + L EL
Sbjct: 2 VLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELPDID------------ 49
Query: 70 EGSFDSAVDGCDGVFHTASPV-------------------------------------IF 92
SF G D V H A+ V +F
Sbjct: 50 --SFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVF 107
Query: 93 LSD-------------------NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133
LS PQ+ Y +K AE A + +G+++V + P V G
Sbjct: 108 LSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMVYG 167
Query: 134 PFFQPILNF---------GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 184
P + NF G + + +S V + ++V A + +PKA+
Sbjct: 168 PGVRG--NFARLMRLIDRGLPLPPGAVKNRRS------LVSLDNLVDAIYLCISLPKAAN 219
Query: 185 RYLLAGSVAQHS--DILKFLRE--HYPTLL 210
L S +++ +R PT L
Sbjct: 220 GTFLVSDGPPVSTAELVDEIRRALGKPTRL 249
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-08
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
+ GA+G S +V+ L RG+ V A VRDP EH E+L + + ++L+
Sbjct: 4 IIGATGRTGSAIVREALARGHEVTALVRDPAKLPAEH--------EKLKVVQGDVLDLED 55
Query: 73 FDSAVDGCDGV 83
A++G D V
Sbjct: 56 VKEALEGQDAV 66
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 3e-08
Identities = 54/237 (22%), Positives = 85/237 (35%), Gaps = 52/237 (21%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
VV V GA+GF+ ++V L +RG V R + L D ++ + +L
Sbjct: 1 MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCE-AYARRLLVMGDLG--QVLFVEFDLR 57
Query: 69 EEGSFDSAVDGCD------GVFHTASPVIFL----------------------------- 93
++ S A++G D G + F
Sbjct: 58 DDESIRKALEGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISALG 117
Query: 94 -SDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP---FFQPILNFGAEV-IL 148
N Y +K EEA +E + + P V G F A +
Sbjct: 118 ADANSPSKYLRSKAEGEEA----VREAFPEATIVRPSVVFGREDRFLNRFAKLLAFLPFP 173
Query: 149 NLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR-YLLAG-SVAQHSDILKFLR 203
LI G Q+ P ++V DV A RAL+ P+ G+ Y L G V +++++ LR
Sbjct: 174 PLIGGGQTKFQP-VYVG--DVAEAIARALKDPETEGKTYELVGPKVYTLAELVELLR 227
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 3e-08
Identities = 36/200 (18%), Positives = 60/200 (30%), Gaps = 55/200 (27%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
V GA+G LVK LL RG+ V A R+P+ + + +L +
Sbjct: 3 VIGATGKTGRRLVKELLARGHQVTALSRNPSK----------APAPGVTPVQKDLFDLAD 52
Query: 73 FDSAVDGCDGVFHTASP----------------------VIFLS-----DNPQEWYSLAK 105
A+ G D V ++ +S + + L
Sbjct: 53 LAEALAGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTFRLDD 112
Query: 106 T-------LAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA 158
A+ AA + + +G+D + P G F G + +
Sbjct: 113 APLFPPYARAKAAAEELLRASGLDWTIVRP----GALFDE---EGETYEIGTEGDPAGES 165
Query: 159 FPYIFVEIRDVVYAHIRALE 178
+ DV A + LE
Sbjct: 166 ----SISRADVAAALLDELE 181
|
Length = 182 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 4e-08
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTGA+G+V LV LLQ G+ V+A VR P + ER+ + + +L +
Sbjct: 1 VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEK-LADRPWS-----ERVTVVRGDLEDP 54
Query: 71 GSFDSAVDGCDGVFH 85
S +A++G D ++
Sbjct: 55 ESLRAALEGIDTAYY 69
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 52.5 bits (127), Expect = 5e-08
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
E+ V VTGA+G V S V +L + GYTV A + ++L+ L GA+E L
Sbjct: 146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEE--QADYLKSL-GASEVLDREDLL 202
Query: 67 L-----LEEGSFDSAVD 78
L + + A+D
Sbjct: 203 DESKKPLLKARWAGAID 219
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 5e-08
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANL---- 67
VTG +GF+ LVK LL+ G+ V VR + + E G +R+ + + +L
Sbjct: 3 VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPN 62
Query: 68 --LEEGSFDSAVDGCDGVFHTAS 88
L + D V H A+
Sbjct: 63 LGLSAAASRELAGKVDHVIHCAA 85
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 1e-07
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ V GA+G+ +V+ L+ G+ V+A VRDP S + L+ G L + +L +
Sbjct: 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAA-GVE----LVEGDLDDH 55
Query: 71 GSFDSAVDGCDGVF 84
S A+ G D VF
Sbjct: 56 ESLVEALKGVDVVF 69
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 1e-07
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VTGA+GFV +V+ LL RG+ V+A VR+P L G L +L + S
Sbjct: 5 VTGATGFVGGAVVRELLARGHEVRAAVRNPE--AAAALA--GGVEVVL----GDLRDPKS 56
Query: 73 FDSAVDGCDGVFHTAS 88
+ G DGV +
Sbjct: 57 LVAGAKGVDGVLLISG 72
|
Length = 275 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 4e-07
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLE 69
V VTGA GF+ S LV+ L+++GY V+A V + L +++ + ++ +
Sbjct: 1 VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIRD 60
Query: 70 EGSFDSAVDGCDGVFHTAS 88
S A+ GCD VFH A+
Sbjct: 61 PDSVRKAMKGCDVVFHLAA 79
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 6e-07
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVR---DPNSPKTEHLRELDGATERLHLFKAN 66
+TG +G S+L + LL++GY V VR N+ + +HL R+ L +
Sbjct: 1 RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKD---RITLHYGD 57
Query: 67 LLEEGSFDSAVDGC--DGVFHTA 87
L + S A++ D ++H A
Sbjct: 58 LTDSSSLRRAIEKVRPDEIYHLA 80
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 7e-07
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ + GA+GF+ L + LL++G+ V VR+ E E + + + +L +
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQ-------EPVAVVEGDLRDL 53
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGID 122
S AV G D V H A D + + + E AKE G+
Sbjct: 54 DSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLE-----AAKEAGVK 100
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 50/211 (23%), Positives = 78/211 (36%), Gaps = 46/211 (21%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VTGA+G + + +V+LLL + +V A VR+P K DG + + + + +
Sbjct: 3 VTGATGKLGTAVVELLLAKVASVVALVRNPEKAKA---FAADGV----EVRQGDYDDPET 55
Query: 73 FDSAVDGCDGVFHTASPVIFLSDNPQE---------------WYSLAKTLAEEAAWKFA- 116
+ A +G D + SP Q Y A E++ + A
Sbjct: 56 LERAFEGVDRLL-LISPSDLEDRIQQHKNFIDAAKQAGVKHIVYLSASGADEDSPFLLAR 114
Query: 117 ---------KENGIDLVAIHPGTVIGPFFQPILNFGAEVILN----LINGDQSFAFPYIF 163
+ +GI + PG F +L F ++ GD A F
Sbjct: 115 DHGATEKYLEASGIPYTILRPGW----FMDNLLEFLPSILEEGTIYGPAGDGKVA----F 166
Query: 164 VEIRDVVYAHIRALEVPKASGR-YLLAGSVA 193
V+ RD+ A AL P G+ Y L G A
Sbjct: 167 VDRRDIAEAAAAALTEPGHEGKVYNLTGPEA 197
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 9 KVVCVTGAS-GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKAN 66
KVV +TG S G + L L +GY V AT R+P + L L + L + + +
Sbjct: 1 KVVLITGCSSGIGLA-LALALAAQGYRVIATARNP-----DKLESLGELLNDNLEVLELD 54
Query: 67 LLEEGSFDSAVDGCDGVFH 85
+ +E S +AV F
Sbjct: 55 VTDEESIKAAVKEVIERFG 73
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 5e-06
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
VTGA+G + S + LL+ G V+A VR + L GA + +L +
Sbjct: 3 VTGATGRIGSKVATTLLEAGRPVRALVRSDE--RAAALAAR-GA----EVVVGDLDDPAV 55
Query: 73 FDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLV 124
+A+ G D VF A P + + + Y A A +E G+ V
Sbjct: 56 LAAALAGVDAVFFLAPPA--PTADARPGYVQAAEAFASA----LREAGVKRV 101
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 6e-06
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+ VTGA GF+ S L + L G+ V+ D SP EH+ + E HL +L
Sbjct: 1 QRALVTGAGGFIGSHLAERLKAEGHYVRGA--DWKSP--EHMTQPTDDDE-FHL--VDLR 53
Query: 69 EEGSFDSAVDGCDGVFHTAS 88
E + A +G D VFH A+
Sbjct: 54 EMENCLKATEGVDHVFHLAA 73
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 7e-06
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ S LV LL+ G V V D S E + + K +LL+
Sbjct: 2 ILVTGGAGFIGSHLVDRLLEEGNEV--VVVDNLSSGRRENIEPEFENKAFRFVKRDLLDT 59
Query: 71 GSFDSAVDGCDGVFHTAS 88
+ A D VFH A+
Sbjct: 60 -ADKVAKKDGDTVFHLAA 76
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 18/101 (17%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTE--HLREL-DGATERLHLF 63
KV +TG +G S+L +LLL++GY V R +S T HL E RLHL
Sbjct: 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLH 60
Query: 64 KANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLA 104
+L + + ++ P E Y+LA
Sbjct: 61 YGDLTDSSNLLRILE---------------EVQPDEIYNLA 86
|
Length = 345 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-05
Identities = 51/236 (21%), Positives = 74/236 (31%), Gaps = 76/236 (32%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVR--DPNSPKTEHLRELDGATERLHLFKANLL 68
V VTG SGF LVK LL+RG VR D P + K ++
Sbjct: 2 VLVTGGSGFFGERLVKQLLERG---GTYVRSFDIAPPGEALSAW---QHPNIEFLKGDIT 55
Query: 69 EEGSFDSAVDGCDGVFHTASP--------------------------------------- 89
+ + A+ G D VFHTA+
Sbjct: 56 DRNDVEQALSGADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSSS 115
Query: 90 -VIFLSDNP----QEW---------YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP- 134
VIF N + Y+ K +AE + + + A+ P + GP
Sbjct: 116 SVIFGGQNIHNGDETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALRPAGIFGPG 175
Query: 135 --FFQPILNFGAEVILN----LINGDQSFAFPYIFVEIRDVVYAHI---RALEVPK 181
PIL E + G + + +V ++ +AHI AL K
Sbjct: 176 DQGLVPILF---EWAEKGLVKFVFGRGNNLVDFTYVH--NLAHAHILAAAALVKGK 226
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKA-TVRDPNSPKTEHLRELDGATERLH---- 61
E+ V VTGA+G V S V +L + GY V A T + + + ++L+EL GA+E +
Sbjct: 145 EDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGK---AEEEDYLKEL-GASEVIDREDL 200
Query: 62 LFKANLLEEGSFDSAVD 78
LE+ + AVD
Sbjct: 201 SPPGKPLEKERWAGAVD 217
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 33/191 (17%)
Query: 13 VTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
VTG GF+ +V+LLL+ G V+ + E +L T + ++ ++
Sbjct: 2 VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVIT----YIEGDVTDK 57
Query: 71 GSFDSAVDGCDGVFHTASPV-IFLSDNPQEWYSL----AKTLAEEAAWKFAKENGID-LV 124
A+ G D V HTA+ + +F + + + + + G+ LV
Sbjct: 58 QDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDA-----CVKAGVRVLV 112
Query: 125 AIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE---VPK 181
V+GP N + I +NGD++ + + Y +AL V K
Sbjct: 113 YTSSMEVVGP------NSYGQPI---VNGDETTPYESTHQD----PYPESKALAEKLVLK 159
Query: 182 ASGRYLLAGSV 192
A+G L G
Sbjct: 160 ANGSTLKNGGR 170
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 7e-05
Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 15/102 (14%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFK---A 65
KV VTGAS + + + L + GY V +R+P E L L + +
Sbjct: 1 KVALVTGASRGIGIEIARALARDGYRVSLGLRNP-----EDLAALSASGGDVEAVPYDAR 55
Query: 66 NLLEEGSFDSAV----DGCDGVFHTAS---PVIFLSDNPQEW 100
+ + + A+ D + H A P + E
Sbjct: 56 DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAEL 97
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 7e-05
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTGA+GF+ S +V+ L+ G+ V R S E GA + + +L +
Sbjct: 3 VFVTGATGFIGSAVVRELVAAGHEVVGLAR---SDAGAAKLEAAGAQ----VHRGDLEDL 55
Query: 71 GSFDSAVDGCDGVFHTA 87
A D V H A
Sbjct: 56 DILRKAAAEADAVIHLA 72
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 8e-05
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 18/119 (15%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72
V GASG + + + L +RG+ V+ R + L G + A+ ++ S
Sbjct: 4 VLGASGPIGREVARELRRRGWDVRLVSRSGSKLA-----WLPGVE----IVAADAMDASS 54
Query: 73 FDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTV 131
+A G D ++H A+P W L L E A+ NG LV PG V
Sbjct: 55 VIAAARGADVIYHCANPAY------TRWEELFPPLM-ENVVAAAEANGAKLV--LPGNV 104
|
These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302 |
| >gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 9e-05
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP---NSPKTEHL-RELDGATER 59
G+ KV +TG +G S+L + LL +GY V +R N+ + +H+ + R
Sbjct: 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKAR 61
Query: 60 LHLFKANLLEEGSFDSAVD 78
+ L +L + S +D
Sbjct: 62 MKLHYGDLSDASSLRRWLD 80
|
Length = 340 |
| >gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-----KTEHLRELDGAT 57
S E ++ V V GA+G++ ++V+ L++RGY V A R+ + K + +EL GA
Sbjct: 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAE 114
|
Length = 390 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 2e-04
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 10 VVCVTGASGFVASWLVKLLLQRGYTVKAT-VRD--PNSPKTEHLRELDGATERLHLFKAN 66
V VTG GF+ +++LLL+R +K V D EH + G T + + +
Sbjct: 1 VCLVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKT-YVTDIEGD 59
Query: 67 LLEEGSFDSAVDGCDGVFHTASPV-IFLSDNPQE 99
+ + A G V HTA+ V +F N +E
Sbjct: 60 IKDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEE 93
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKA-TVRDPNSPKTEHLRELDGATE---R 59
G+G V VTGA+G V S V LL + GY V A T R + ++LR L GA+E R
Sbjct: 146 GDGP---VLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEA---DYLRSL-GASEIIDR 198
Query: 60 LHLF-KANLLEEGSFDSAVDGCDG 82
L L++ + AVD G
Sbjct: 199 AELSEPGRPLQKERWAGAVDTVGG 222
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 9 KVVCVTGA-SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL 67
K V +TG SGF + L K L G+TV A N P + LR + ++RL + ++
Sbjct: 1 KAVLITGCDSGF-GNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRV--CSDRLRTLQLDV 57
Query: 68 LEEGSFDSAV 77
+ A
Sbjct: 58 TKPEQIKRAA 67
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 3e-04
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKA 65
E+ +C+TGA GF+AS + + L G+ + A+ + K EH+ E D HL
Sbjct: 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIAS----DWKKNEHMSE-DMFCHEFHLVDL 73
Query: 66 NLLEEGSFDSAVDGCDGVFHTAS 88
++E G D VF+ A+
Sbjct: 74 RVMENCL--KVTKGVDHVFNLAA 94
|
Length = 370 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 4e-04
Identities = 43/220 (19%), Positives = 69/220 (31%), Gaps = 54/220 (24%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTV----KATVRDPNSPKTEHLRELDGATERLHLFKAN 66
+ + G + F+ LV+ LL G+ V + + EH+ D +R L
Sbjct: 3 ILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDLPEGVEHIV-GD-RNDRDAL--EE 58
Query: 67 LLEEGSFDSAVDGC-----------DGVFHTASPVIFLS--------------DNP---- 97
LL FD VD D IF+S P
Sbjct: 59 LLGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQYIFISSASVYLKPGRVITESTPLREP 118
Query: 98 -----QEW--YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF-FQPILNFGAEVILN 149
+ Y K AE+ + + P + GP + L + + +
Sbjct: 119 DAVGLSDPWDYGRGKRAAEDVL---IEAAAFPYTIVRPPYIYGPGDYTGRLAYFFDRLAR 175
Query: 150 ----LINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR 185
L+ GD F+ ++D+ A + A PKA G
Sbjct: 176 GRPILVPGDGH--SLVQFIHVKDLARALLGAAGNPKAIGG 213
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 9e-04
Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 16/80 (20%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR-ELDGATERLHLFKANL 67
K+V +TG +GF+ L + L G+ V R P + DG +
Sbjct: 1 KIV-ITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGLAEVITWDGLSLG-------- 51
Query: 68 LEEGSFDSAVDGCDGVFHTA 87
+ G D V + A
Sbjct: 52 ------PWELPGADAVINLA 65
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 9e-04
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 22/155 (14%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V +TG +G + S L++ LL+RG+ V + + + + EHL + L + + ++ ++
Sbjct: 3 VLITGGAGQIGSHLIEHLLERGHQV-VVIDNFATGRREHLPDHPN----LTVVEGSIADK 57
Query: 71 GSFDSAVDGC--DGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAW--KFAKENGIDLVAI 126
D D V HTA+ +P +WY T A + AK+ G+ +
Sbjct: 58 ALVDKLFGDFKPDAVVHTAAAY----KDPDDWYEDTLTNVVGGANVVQAAKKAGVKRLI- 112
Query: 127 HPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPY 161
+FQ L +G + + I D A P
Sbjct: 113 --------YFQTALCYGLKPMQQPIRLDHPRAPPG 139
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 9e-04
Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 35/166 (21%)
Query: 87 ASPVIFLSDNPQEW-YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF--FQPILNFG 143
SP IF S Q W Y+ AK L E + ENG++ + P IGP F P ++
Sbjct: 167 ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGP 226
Query: 144 AEVI----------------LNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-KASGRY 186
+E + L L++G QS FV I+D + A + +E P +A+G
Sbjct: 227 SEGVPRVLACFSNNLLRREPLKLVDGGQS---QRTFVYIKDAIEAVLLMIENPARANGHI 283
Query: 187 LLAG------SVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKVS 226
G +V Q ++++ E Y + LEE PT+ VS
Sbjct: 284 FNVGNPNNEVTVRQLAEMMT---EVYAKVSGEPALEE---PTVDVS 323
|
Length = 386 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.001
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 13 VTGASGFVASWLVKLLLQ--RGYTVKATVRDPNSPKTEHLRELDGATERLH 61
VTG +GF+ LV LL R TV VR + + E L GA +R+
Sbjct: 5 VTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGA-DRVV 54
|
Length = 657 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.001
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKA 65
++K V VTGA+ + V+ LL G V A VRDP S HL G ++ +
Sbjct: 2 KDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGS--AAHLVAKYGD--KVVPLRL 57
Query: 66 NLLEEGSFDSAVDGCDGV 83
++ + S +A V
Sbjct: 58 DVTDPESIKAAAAQAKDV 75
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.001
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 21/88 (23%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGATERLHLF 63
K + +TG +GF+ S L LL+ G+ V T R N EHL
Sbjct: 1 KRILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRN---IEHLI----GHPNFEFI 53
Query: 64 KANLLE--EGSFDSAVDGCDGVFHTASP 89
+ ++ E D ++H A P
Sbjct: 54 RHDVTEPLYLEVDQ-------IYHLACP 74
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.002
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTG +GF+ S LV+ LL+RG+ V V D S T L + + ++ ++
Sbjct: 2 VLVTGGAGFIGSHLVERLLERGHEV--IVLDNLS--TGKKENLPEVKPNVKFIEGDIRDD 57
Query: 71 GSFDSAVDGCDGVFHTA 87
+ A +G D VFH A
Sbjct: 58 ELVEFAFEGVDYVFHQA 74
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.002
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 20/100 (20%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATER 59
MM +G KVV VTGA+ + V+ LL RG V A RDP S + R
Sbjct: 1 MMDIKG--KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES--------VTDLGPR 50
Query: 60 LHLFKANLLEEGSFDSAVDGCD---------GVFHTASPV 90
+ + ++ + S +A + G+F T S +
Sbjct: 51 VVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLL 90
|
Length = 238 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V VTG +GF SWL L + G V DP + + ++ + ++
Sbjct: 5 KRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPT-NPNLFELANLD-NKISSTRGDIR 62
Query: 69 EEGSFDSAVDGC--DGVFH-TASPVIFLS-DNPQEWYS 102
+ + A+ + VFH A P++ LS +P E +
Sbjct: 63 DLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFE 100
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
E+ V VTGA+G V S V +L + GY V A+ + ++L++L GA E +
Sbjct: 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTG--KADAADYLKKL-GAKEVIP 197
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.002
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V + G +GF+ S LV LL+ G V+ R EL K +
Sbjct: 2 VLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPY------ELPLGGVDYI--KGDYENR 53
Query: 71 GSFDSAVDGCDGVFHTAS 88
+SA+ G D V H AS
Sbjct: 54 ADLESALVGIDTVIHLAS 71
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.002
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ + GASG S ++K L+RG+ V A VR+ + A + + + + ++ +
Sbjct: 3 IAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLA---------ARQGVTILQKDIFDL 53
Query: 71 GSFDSAVDGCDGVF 84
S S + G D V
Sbjct: 54 TSLASDLAGHDAVI 67
|
Length = 211 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 37.4 bits (87), Expect = 0.003
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE-RLHLFKANL 67
++ VTG G + + + + L + GY V A PN + E + GA + + ++
Sbjct: 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG-PNEERAEAWLQEQGALGFDFRVVEGDV 59
Query: 68 LEEGSFDSAVDGCDGVFHTASPVIFLSDN 96
SF+S V P+ L +N
Sbjct: 60 ---SSFESCKAAVAKVEAELGPIDVLVNN 85
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 258 | |||
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.98 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.97 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.97 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.97 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.97 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.97 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.97 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.97 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.97 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.96 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.96 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.96 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.96 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.95 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.95 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.95 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.94 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.93 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.93 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.93 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.92 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.92 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.91 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.9 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.89 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.89 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.88 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.87 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.87 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.86 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.84 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.84 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.84 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.84 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.84 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.84 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.83 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.83 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.83 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.83 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.82 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.82 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.81 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.81 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.81 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.8 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.8 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.8 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.8 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.8 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.8 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.79 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.79 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.79 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.78 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.77 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.76 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.76 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.76 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.76 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.76 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.75 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.75 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.75 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.74 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.74 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.74 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.74 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.73 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.72 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.72 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.72 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.72 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.72 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.72 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.72 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.71 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.71 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.71 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.71 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.71 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.71 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.7 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.7 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.7 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.7 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.7 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.7 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.7 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.69 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.69 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.69 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.69 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.69 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.69 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.69 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.68 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.67 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.67 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.67 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.66 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.66 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.66 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.66 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.65 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.65 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.65 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.65 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.65 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.64 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.64 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.64 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.64 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.63 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.62 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.6 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.6 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.59 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.59 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.59 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.58 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.58 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.57 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.57 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.57 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.57 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.57 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.56 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.55 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.55 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.54 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.52 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.51 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.5 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.49 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.49 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.48 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.47 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.46 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.44 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.43 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.41 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.39 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.39 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.39 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.37 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.31 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.3 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.26 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.26 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.26 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.25 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.24 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.23 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.21 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.21 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.2 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.2 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.17 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.15 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.13 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.13 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 99.07 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.02 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.98 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.96 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.95 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.89 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.87 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.85 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.85 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.83 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.81 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.74 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.73 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.64 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.62 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.59 | |
| PLN00106 | 323 | malate dehydrogenase | 98.56 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.51 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.51 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.49 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.47 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.46 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.44 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.36 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.34 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.34 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 98.29 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.24 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.21 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.2 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.19 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.06 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.99 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.98 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 97.96 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.93 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.9 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.82 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.78 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.78 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.76 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.76 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.73 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.71 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.65 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.63 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.6 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.6 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.59 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.57 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.54 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.54 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.51 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.51 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 97.49 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 97.48 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.46 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.45 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.45 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.42 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.41 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 97.39 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.36 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.35 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 97.34 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.34 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.31 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.3 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.29 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.27 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 97.26 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.26 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.24 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 97.23 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.23 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.23 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.22 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.22 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.22 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 97.22 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.21 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.17 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.14 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 97.14 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.14 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.13 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.13 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.12 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 97.11 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 97.08 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.07 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 97.07 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.06 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.06 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.05 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.05 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.03 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 97.02 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.02 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 97.01 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 97.01 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.01 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.01 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.0 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 97.0 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 97.0 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.99 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.97 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.96 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 96.96 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.96 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.94 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.93 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.92 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.92 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.92 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.92 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.91 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.9 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.86 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.85 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 96.85 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 96.82 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.82 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.8 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.8 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 96.8 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 96.78 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.78 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.78 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.78 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.78 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.77 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.75 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.75 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.75 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.74 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.74 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.73 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.73 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.71 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 96.71 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.7 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.67 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 96.66 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.65 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.65 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.64 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 96.61 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.61 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.61 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.6 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.6 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 96.59 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.59 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 96.59 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 96.58 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.56 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 96.55 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.54 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.53 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.52 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.52 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 96.51 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 96.51 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.5 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.49 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.48 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 96.44 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 96.43 | |
| KOG2013 | 603 | consensus SMT3/SUMO-activating complex, catalytic | 96.42 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.41 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.41 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.41 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 96.39 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.38 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.38 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.38 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.37 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.37 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.36 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.36 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 96.36 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 96.35 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.35 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.35 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.35 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.35 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.33 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 96.32 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.32 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.29 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.28 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.28 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.27 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.26 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.25 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.25 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.25 | |
| COG0027 | 394 | PurT Formate-dependent phosphoribosylglycinamide f | 96.23 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.23 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.22 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.21 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 96.21 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 96.2 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 96.19 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 96.19 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.18 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.17 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.16 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 96.15 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.14 |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-42 Score=276.04 Aligned_cols=256 Identities=56% Similarity=0.926 Sum_probs=221.6
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCC
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDG 79 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (258)
|+.. .+++|+||||+||||++|+++|+++||.|++++|++++.+. +.+..++...++...+.+|+++++++.+++++
T Consensus 1 m~~~--~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g 78 (327)
T KOG1502|consen 1 MDQD--EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG 78 (327)
T ss_pred CCCC--CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhC
Confidence 4443 57899999999999999999999999999999999988543 45666666667799999999999999999999
Q ss_pred CcEEEecCCCCCCCCCCch-------------------------------------------------------------
Q 025065 80 CDGVFHTASPVIFLSDNPQ------------------------------------------------------------- 98 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~~~~------------------------------------------------------------- 98 (258)
||.|+|+|........++.
T Consensus 79 cdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~ 158 (327)
T KOG1502|consen 79 CDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCR 158 (327)
T ss_pred CCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHH
Confidence 9999999999766444322
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHH
Q 025065 99 ---EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAH 173 (258)
Q Consensus 99 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~ 173 (258)
.+|..+|..+|+..++++++.+++.+.+-|+.|+||...+........+..+++|. ..++ ....|+||+|+|.|+
T Consensus 159 ~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AH 238 (327)
T KOG1502|consen 159 CKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAH 238 (327)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHH
Confidence 57999999999999999999999999999999999998887666677888889997 6666 566699999999999
Q ss_pred HHhhcCCCCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCcc---CCCCccccCHHHHHhcC-CCccchhHHHHHHHH
Q 025065 174 IRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEE---KYQPTIKVSQERAKSLG-INFTPWEVGVRGCIE 249 (258)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~---~~~~~~~~d~~k~~~lg-~~p~~~~~~l~~~~~ 249 (258)
+.+++++...|+|++.++..++.|+++.+.+.+|..++|..... .......++++|++.|| ++.+++++.+.++++
T Consensus 239 v~a~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~ 318 (327)
T KOG1502|consen 239 VLALEKPSAKGRYICVGEVVSIKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGFKFRPLEETLSDTVE 318 (327)
T ss_pred HHHHcCcccCceEEEecCcccHHHHHHHHHHhCCCCCCCCCCCccccccccccccccHHHHhcccceecChHHHHHHHHH
Confidence 99999999999999999999999999999999998887766542 23334468999998877 777999999999999
Q ss_pred HHHHcCCCC
Q 025065 250 SLMEKGFLS 258 (258)
Q Consensus 250 ~~~~~~~~~ 258 (258)
+++++++++
T Consensus 319 sl~~~~~l~ 327 (327)
T KOG1502|consen 319 SLREKGLLL 327 (327)
T ss_pred HHHHhcCCC
Confidence 999999874
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=275.79 Aligned_cols=252 Identities=67% Similarity=1.059 Sum_probs=198.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
++|+||||||+||||++|+++|+++|++|++++|+...... ..+........+++++.+|+++++.+..+++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 46899999999999999999999999999999987654221 11111111124689999999999999999999999999
Q ss_pred cCCCCCCCCCCc--h--------------------------------------------------------------hhH
Q 025065 86 TASPVIFLSDNP--Q--------------------------------------------------------------EWY 101 (258)
Q Consensus 86 ~a~~~~~~~~~~--~--------------------------------------------------------------~~Y 101 (258)
+|+.......++ . +.|
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 162 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWY 162 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchH
Confidence 998643211111 0 148
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCC-CCcceeeHHHHHHHHHHhhcCC
Q 025065 102 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+|..+|++++.+.++++++++++||+++|||...+........+.+++.|...++ +.++|+|++|+|++++.+++++
T Consensus 163 ~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 242 (322)
T PLN02662 163 VLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIP 242 (322)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCc
Confidence 889999999999998888999999999999999865432333445566666655556 7899999999999999999987
Q ss_pred CCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHHHhcCCCccchhHHHHHHHHHHHHcCCCC
Q 025065 181 KASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 258 (258)
Q Consensus 181 ~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~p~~~~~~l~~~~~~~~~~~~~~ 258 (258)
...|.|+.+++.+|++|+++.+.+.++...+|.... ........+|++|++.|||++++++++|+++++|++++++++
T Consensus 243 ~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~~~~~~~l~~~~~~~~~~~~~~ 322 (322)
T PLN02662 243 SASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEFIPLEVSLKDTVESLKEKGFLS 322 (322)
T ss_pred CcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCCCCCCCccccccccccChHHHHHhCCccccHHHHHHHHHHHHHHcCCCC
Confidence 666777667889999999999999987655444322 234456779999996699999999999999999999999875
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=263.20 Aligned_cols=245 Identities=18% Similarity=0.236 Sum_probs=204.2
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 84 (258)
|++|||||.||||++++++++++. ++|+++++-.-....+.+..+.. .++..++++|++|.+.+..+++ ++|+|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv 79 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEYQPDAVV 79 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence 579999999999999999999875 45788876554433333333222 4689999999999999999998 599999
Q ss_pred ecCCCCCC--CCCCch------------------------------------------------------hhHHHHHHHH
Q 025065 85 HTASPVIF--LSDNPQ------------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 85 h~a~~~~~--~~~~~~------------------------------------------------------~~Y~~sK~~~ 108 (258)
|+||.++. +...|. ++|+.||+.+
T Consensus 80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAas 159 (340)
T COG1088 80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAAS 159 (340)
T ss_pred EechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhH
Confidence 99999765 223333 8999999999
Q ss_pred HHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCC
Q 025065 109 EEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKAS 183 (258)
Q Consensus 109 e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~ 183 (258)
+.++++|.+.+|++++|.|+++-|||.+.+. ..++.++.+.+.|+ ++++ +.|||+||+|-|+|+..++++...+
T Consensus 160 D~lVray~~TYglp~~ItrcSNNYGPyqfpE-KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~G 238 (340)
T COG1088 160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPE-KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIG 238 (340)
T ss_pred HHHHHHHHHHcCCceEEecCCCCcCCCcCch-hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcCC
Confidence 9999999999999999999999999998765 56778888889998 7777 8999999999999999999999886
Q ss_pred ceEE-EeCCCcCHHHHHHHHHHhCCCCCC-----CCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHH
Q 025065 184 GRYL-LAGSVAQHSDILKFLREHYPTLLR-----SGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 184 ~~~~-~~~~~~t~~e~~~~i~~~~~~~~~-----~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
.+|+ +++...+..|+++.|.+.++...- ..... +.-...+.+|.+|+ ++|||+| ++|++||+++++||.+
T Consensus 239 E~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~ 318 (340)
T COG1088 239 ETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLD 318 (340)
T ss_pred ceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHh
Confidence 6995 557788999999999999976432 11111 56677889999999 9999999 9999999999999988
Q ss_pred cC
Q 025065 254 KG 255 (258)
Q Consensus 254 ~~ 255 (258)
+.
T Consensus 319 N~ 320 (340)
T COG1088 319 NE 320 (340)
T ss_pred ch
Confidence 63
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=279.15 Aligned_cols=252 Identities=44% Similarity=0.780 Sum_probs=195.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
++|+||||||+||||++|+++|+++|++|++++|+........+..+.....++.++.+|+++.+.+.++++++|+|||+
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~ 88 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT 88 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence 56899999999999999999999999999999987653221111111111235889999999999999999999999999
Q ss_pred CCCCCCCCCCch----------------------------------------------------------hhHHHHHHHH
Q 025065 87 ASPVIFLSDNPQ----------------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 87 a~~~~~~~~~~~----------------------------------------------------------~~Y~~sK~~~ 108 (258)
|+.......... ++|+.+|.++
T Consensus 89 A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~a 168 (342)
T PLN02214 89 ASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVA 168 (342)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHH
Confidence 986422110000 1599999999
Q ss_pred HHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcCCCCCceE
Q 025065 109 EEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRY 186 (258)
Q Consensus 109 e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~ 186 (258)
|++++.+.++++++++++||++||||+...........+...+.|. ..++ ..++|+|++|+|++++.+++++...|.|
T Consensus 169 E~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~~g~y 248 (342)
T PLN02214 169 EQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGRY 248 (342)
T ss_pred HHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcccCCcE
Confidence 9999999888899999999999999986543222222333455665 4445 7789999999999999999987666788
Q ss_pred EEeCCCcCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccCHHHHHhcCCCccchhHHHHHHHHHHHHcCCCC
Q 025065 187 LLAGSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFLS 258 (258)
Q Consensus 187 ~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~~~lg~~p~~~~~~l~~~~~~~~~~~~~~ 258 (258)
+++++..++.|+++.+.+.++...+|.... ........+|++|+++|||+|++++++|+++++|+++.++|+
T Consensus 249 n~~~~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p~~lee~i~~~~~~~~~~~~~~ 323 (342)
T PLN02214 249 LLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFTSTKQSLYDTVKSLQEKGHLA 323 (342)
T ss_pred EEecCCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHHHcCCcccCHHHHHHHHHHHHHHcCCCC
Confidence 777678999999999999997544444321 233445568999996699999999999999999999998874
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=271.57 Aligned_cols=251 Identities=56% Similarity=0.944 Sum_probs=196.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.+++||||||+||||++++++|+++|++|+++.|+...... ..+........+++++.+|+++++.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 46899999999999999999999999999999987654321 11111111124689999999999999999999999999
Q ss_pred cCCCCCCCCCCch----------------------------------------------------------------hhH
Q 025065 86 TASPVIFLSDNPQ----------------------------------------------------------------EWY 101 (258)
Q Consensus 86 ~a~~~~~~~~~~~----------------------------------------------------------------~~Y 101 (258)
+|+.......++. +.|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 163 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY 163 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence 9997432111110 128
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCC-CCcceeeHHHHHHHHHHhhcCC
Q 025065 102 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+|..+|.+++.+.++++++++++||+++|||...+........+..+..|...++ +.++|+|++|+|++++.+++++
T Consensus 164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~ 243 (322)
T PLN02986 164 PLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETP 243 (322)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCc
Confidence 999999999999999888999999999999999865433333455666666764455 7789999999999999999988
Q ss_pred CCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCccCCCCc--cccCHHHHHhcCCCccchhHHHHHHHHHHHHcCCC
Q 025065 181 KASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPT--IKVSQERAKSLGINFTPWEVGVRGCIESLMEKGFL 257 (258)
Q Consensus 181 ~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~--~~~d~~k~~~lg~~p~~~~~~l~~~~~~~~~~~~~ 257 (258)
...+.|+++++.+|+.|+++.+.+.+|...++.......... ..+|++|++.|||+|++++++|+++++|+++.|++
T Consensus 244 ~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lg~~~~~l~e~~~~~~~~~~~~~~~ 322 (322)
T PLN02986 244 SANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEMNEMICKVCVEKVKNLGVEFTPMKSSLRDTILSLKEKCLL 322 (322)
T ss_pred ccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccccccCCccCHHHHHHcCCcccCHHHHHHHHHHHHHHcCCC
Confidence 766788778889999999999999998654443321111222 24899999779999999999999999999999875
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-40 Score=276.05 Aligned_cols=249 Identities=16% Similarity=0.146 Sum_probs=189.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhh-cccc-CcCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHL-RELD-GATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~-~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
+++|+|||||||||||++|+++|+++|++|++++|....... ... .... ....++.++.+|+++.+.+.++++++|
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 467899999999999999999999999999999986543211 000 0000 001357899999999999999999999
Q ss_pred EEEecCCCCCC--CCCCch---------------------------------------------------hhHHHHHHHH
Q 025065 82 GVFHTASPVIF--LSDNPQ---------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 82 ~Vih~a~~~~~--~~~~~~---------------------------------------------------~~Y~~sK~~~ 108 (258)
+|||+|+.... ...++. ++|+.+|.++
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN 172 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence 99999997532 112221 5799999999
Q ss_pred HHHHHHHHHHcCCcEEEEcCCccccCCcCCCC---CccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCC
Q 025065 109 EEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 109 e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
|.+++.+.++++++++++||+++|||++.+.. ...+.++.+++.|+ .+++ +.++|+|++|+|++++.++..+
T Consensus 173 e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~ 252 (348)
T PRK15181 173 ELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN 252 (348)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc
Confidence 99999998888999999999999999875432 23456666777776 3344 6899999999999999877653
Q ss_pred C---CCceEEE-eCCCcCHHHHHHHHHHhCCCCCC------CCCC--ccCCCCccccCHHHH-HhcCCCc-cchhHHHHH
Q 025065 181 K---ASGRYLL-AGSVAQHSDILKFLREHYPTLLR------SGKL--EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRG 246 (258)
Q Consensus 181 ~---~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~------~~~~--~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~ 246 (258)
. ..++|++ +++.+|++|+++.+.+.++.... +... .........+|++|+ +.|||+| ++++++|++
T Consensus 253 ~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~sl~egl~~ 332 (348)
T PRK15181 253 DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQ 332 (348)
T ss_pred cccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCCCCCHHHHHHH
Confidence 2 3458855 57899999999999998863211 1111 122334567899999 7799999 899999999
Q ss_pred HHHHHHHc
Q 025065 247 CIESLMEK 254 (258)
Q Consensus 247 ~~~~~~~~ 254 (258)
+++|++.+
T Consensus 333 ~~~w~~~~ 340 (348)
T PRK15181 333 TLKWYIDK 340 (348)
T ss_pred HHHHHHHh
Confidence 99999875
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-39 Score=267.08 Aligned_cols=251 Identities=54% Similarity=0.901 Sum_probs=195.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.+|+||||||+||||++|+++|+++|++|++++|+...... ..+........+++++.+|+++.+.+.++++++|+|||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 46899999999999999999999999999998887654321 11111111124688999999999999999999999999
Q ss_pred cCCCCCCC--CCCch--------------------------------------h-------------------------h
Q 025065 86 TASPVIFL--SDNPQ--------------------------------------E-------------------------W 100 (258)
Q Consensus 86 ~a~~~~~~--~~~~~--------------------------------------~-------------------------~ 100 (258)
+|+..... ..... . +
T Consensus 84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 163 (325)
T PLN02989 84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW 163 (325)
T ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence 99964321 11111 0 3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCC-CCcceeeHHHHHHHHHHhhcC
Q 025065 101 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~v~D~a~~~~~~~~~ 179 (258)
|+.+|.++|.+++.+.++++++++++||+++|||+..+.......++..+..|+..++ +.++|+|++|+|++++.++++
T Consensus 164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~ 243 (325)
T PLN02989 164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALET 243 (325)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcC
Confidence 9999999999999998888999999999999999876533333455666666664344 668999999999999999998
Q ss_pred CCCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHcC
Q 025065 180 PKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKG 255 (258)
Q Consensus 180 ~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~~ 255 (258)
+...+.|+++++.+|++|+++.+.+.+|....+.... ......+..|++|+++|||+| ++++++|+++++|++..+
T Consensus 244 ~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~ 323 (325)
T PLN02989 244 PSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKC 323 (325)
T ss_pred cccCceEEEecCCCCHHHHHHHHHHHCCCCCCCCCCCCcccccccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 7666788778889999999999999997543322111 112235688999996699999 999999999999999887
Q ss_pred CC
Q 025065 256 FL 257 (258)
Q Consensus 256 ~~ 257 (258)
.+
T Consensus 324 ~~ 325 (325)
T PLN02989 324 LV 325 (325)
T ss_pred CC
Confidence 53
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=266.36 Aligned_cols=250 Identities=45% Similarity=0.769 Sum_probs=190.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..++||||||+||||++|+++|+++|++|++++|+...... ..+........++.++.+|+++.+.+.++++++|+|||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 46899999999999999999999999999999987544321 11111111113588999999999999999999999999
Q ss_pred cCCCCCCCCCCc--h----------------------------------------------h----------------hH
Q 025065 86 TASPVIFLSDNP--Q----------------------------------------------E----------------WY 101 (258)
Q Consensus 86 ~a~~~~~~~~~~--~----------------------------------------------~----------------~Y 101 (258)
+|+.......++ . + +|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 163 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMY 163 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchH
Confidence 998753321111 0 0 59
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHH--HHHcCC-CCCC--CCcceeeHHHHHHHHHHh
Q 025065 102 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVIL--NLINGD-QSFA--FPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~--~~~~g~-~~~~--~~~~~i~v~D~a~~~~~~ 176 (258)
+.+|.++|.+++.+++++|++++++||+++|||+....... .++. ....+. ..++ ..++|+|++|+|++++.+
T Consensus 164 ~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~ 241 (351)
T PLN02650 164 FVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPP--SLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFL 241 (351)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCc--cHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHH
Confidence 99999999999999999999999999999999986543221 1222 223343 3233 568999999999999999
Q ss_pred hcCCCCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHH
Q 025065 177 LEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 177 ~~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
++++...+.|+++++.+|+.|+++.+.+.++...++.... ........+|++|+++|||+| ++++++|+++++|++.
T Consensus 242 l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~ 321 (351)
T PLN02650 242 FEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCRE 321 (351)
T ss_pred hcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCCCCCCCCcCcccccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 9887656688888889999999999999887544433221 223345567888888899999 8999999999999999
Q ss_pred cCCCC
Q 025065 254 KGFLS 258 (258)
Q Consensus 254 ~~~~~ 258 (258)
.+.++
T Consensus 322 ~~~~~ 326 (351)
T PLN02650 322 KGLIP 326 (351)
T ss_pred cCCCC
Confidence 88763
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=264.26 Aligned_cols=251 Identities=38% Similarity=0.608 Sum_probs=190.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+++++||||||+||||++|+++|+++|++|++++|+...... ..+..+.. ..++.++.+|+++++.+.++++++|+||
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 467899999999999999999999999999999887643211 11111111 1358899999999999999999999999
Q ss_pred ecCCCCCCCCCCch------------------------------------h-----------------------------
Q 025065 85 HTASPVIFLSDNPQ------------------------------------E----------------------------- 99 (258)
Q Consensus 85 h~a~~~~~~~~~~~------------------------------------~----------------------------- 99 (258)
|+|+........+. .
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~ 165 (338)
T PLN00198 86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPT 165 (338)
T ss_pred EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCcc
Confidence 99996432211111 1
Q ss_pred -hHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCC--CCC--------CCcceeeHHH
Q 025065 100 -WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ--SFA--------FPYIFVEIRD 168 (258)
Q Consensus 100 -~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~--~~~--------~~~~~i~v~D 168 (258)
+|+.+|.++|.+++.++++++++++++||++||||+.....+.....+.....++. ..+ ..++|+|++|
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D 245 (338)
T PLN00198 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVED 245 (338)
T ss_pred chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHH
Confidence 39999999999999999889999999999999999865432322223344455541 111 2379999999
Q ss_pred HHHHHHHhhcCCCCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCc-cCCCCccccCHHHHHhcCCCc-cchhHHHHH
Q 025065 169 VVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE-EKYQPTIKVSQERAKSLGINF-TPWEVGVRG 246 (258)
Q Consensus 169 ~a~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~ 246 (258)
+|++++.+++.+...+.|++++...|+.|+++.+.+.++...++.... ........+|++|++++||+| ++++++|++
T Consensus 246 ~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~G~~p~~~l~~gi~~ 325 (338)
T PLN00198 246 VCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDFPSKAKLIISSEKLISEGFSFEYGIEEIYDQ 325 (338)
T ss_pred HHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCCccccccCCCCccccChHHHHhCCceecCcHHHHHHH
Confidence 999999999886655678888888999999999999886533332211 122334568999995579999 999999999
Q ss_pred HHHHHHHcCCC
Q 025065 247 CIESLMEKGFL 257 (258)
Q Consensus 247 ~~~~~~~~~~~ 257 (258)
+++|++.++++
T Consensus 326 ~~~~~~~~~~~ 336 (338)
T PLN00198 326 TVEYFKAKGLL 336 (338)
T ss_pred HHHHHHHcCCC
Confidence 99999999876
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=245.06 Aligned_cols=237 Identities=21% Similarity=0.226 Sum_probs=188.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~ 86 (258)
|+||||||+||||++.+.+|++.||+|++++.-..... +.+... ..+++++|+.|.+.+.++|. ++|+|||+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~-~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~~idaViHF 74 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHK-IALLKL-----QFKFYEGDLLDRALLTAVFEENKIDAVVHF 74 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCH-HHhhhc-----cCceEEeccccHHHHHHHHHhcCCCEEEEC
Confidence 57999999999999999999999999999986544332 222221 16899999999999999996 59999999
Q ss_pred CCCCCC--CCCCch---------------------------------------------------hhHHHHHHHHHHHHH
Q 025065 87 ASPVIF--LSDNPQ---------------------------------------------------EWYSLAKTLAEEAAW 113 (258)
Q Consensus 87 a~~~~~--~~~~~~---------------------------------------------------~~Y~~sK~~~e~~~~ 113 (258)
||.... +..+|. ++||.||++.|++++
T Consensus 75 Aa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~ 154 (329)
T COG1087 75 AASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILR 154 (329)
T ss_pred ccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHH
Confidence 998543 445555 899999999999999
Q ss_pred HHHHHcCCcEEEEcCCccccCCcCCCCC----c---cHHHHHHHHcCC----CCCC---------CCcceeeHHHHHHHH
Q 025065 114 KFAKENGIDLVAIHPGTVIGPFFQPILN----F---GAEVILNLINGD----QSFA---------FPYIFVEIRDVVYAH 173 (258)
Q Consensus 114 ~~~~~~~~~~~ilRp~~v~G~~~~~~~~----~---~~~~~~~~~~g~----~~~~---------~~~~~i~v~D~a~~~ 173 (258)
++.+.++++++++|.+++-|........ . ....+.+...|+ .+|+ ..||||||.|+|++.
T Consensus 155 d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH 234 (329)
T COG1087 155 DAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAH 234 (329)
T ss_pred HHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHH
Confidence 9999999999999999999975442211 1 122233334444 3444 689999999999999
Q ss_pred HHhhcCCCCCc---eE-EEeCCCcCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccCHHHH-HhcCCCc-c-chhHH
Q 025065 174 IRALEVPKASG---RY-LLAGSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERA-KSLGINF-T-PWEVG 243 (258)
Q Consensus 174 ~~~~~~~~~~~---~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~-~~lg~~p-~-~~~~~ 243 (258)
+.+++.-..+| +| +++|...|+.|+++.+.+..| .++|.... +.++..+..|++|+ +.|||+| + ++++.
T Consensus 235 ~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg-~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~~~L~~i 313 (329)
T COG1087 235 VLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTG-RDIPVEIAPRRAGDPAILVADSSKARQILGWQPTYDDLEDI 313 (329)
T ss_pred HHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhC-CcCceeeCCCCCCCCceeEeCHHHHHHHhCCCcccCCHHHH
Confidence 99987543333 67 556999999999999999997 34555444 55677889999999 8899999 6 99999
Q ss_pred HHHHHHHHH
Q 025065 244 VRGCIESLM 252 (258)
Q Consensus 244 l~~~~~~~~ 252 (258)
+++..+|..
T Consensus 314 i~~aw~W~~ 322 (329)
T COG1087 314 IKDAWDWHQ 322 (329)
T ss_pred HHHHHHHhh
Confidence 999999998
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=253.40 Aligned_cols=250 Identities=42% Similarity=0.689 Sum_probs=187.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+|+||||||+||||++|+++|+++|++|++++|+..... .....+.. ..+++++.+|+++.+.+.++++++|+|||+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSL-HLLSKWKE-GDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHhhcc-CCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 4689999999999999999999999999999988753321 11111111 246889999999999999999999999999
Q ss_pred CCCCCCCC----CCc-------------h---------------------------h-----------------------
Q 025065 87 ASPVIFLS----DNP-------------Q---------------------------E----------------------- 99 (258)
Q Consensus 87 a~~~~~~~----~~~-------------~---------------------------~----------------------- 99 (258)
|+...... .++ . .
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~ 166 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV 166 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence 99753211 111 0 0
Q ss_pred --------hHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---------CCc
Q 025065 100 --------WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---------FPY 161 (258)
Q Consensus 100 --------~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---------~~~ 161 (258)
+|+.||.++|+++..++++++++++++||++||||+.....+.....+.....|. ..++ ..+
T Consensus 167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 246 (353)
T PLN02896 167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSI 246 (353)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCce
Confidence 5999999999999999998999999999999999986543332222222223444 2221 236
Q ss_pred ceeeHHHHHHHHHHhhcCCCCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCC--ccCCCCccccCHHHHHhcCCCc-c
Q 025065 162 IFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERAKSLGINF-T 238 (258)
Q Consensus 162 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~lg~~p-~ 238 (258)
+|+|++|+|++++.+++.+...+.|++++..+++.|+++.+.+.++........ ..........|++++++|||+| +
T Consensus 247 dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lGw~p~~ 326 (353)
T PLN02896 247 ALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSIPSEISSKKLRDLGFEYKY 326 (353)
T ss_pred eEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCCCCccccccccccCccccccCHHHHHHcCCCccC
Confidence 999999999999999987655567888889999999999999998643211111 1111123456888887799999 8
Q ss_pred chhHHHHHHHHHHHHcCCCC
Q 025065 239 PWEVGVRGCIESLMEKGFLS 258 (258)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~~ 258 (258)
+++++|+++++|+++++.++
T Consensus 327 ~l~~~i~~~~~~~~~~~~~~ 346 (353)
T PLN02896 327 GIEEIIDQTIDCCVDHGFLP 346 (353)
T ss_pred CHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999988763
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=258.76 Aligned_cols=245 Identities=21% Similarity=0.242 Sum_probs=182.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhcccc--CcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
+.|+|||||||||||++|+++|+++ |++|++++|+..... .+.... ....+++++.+|++|.+.+.++++++|+|
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~--~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V 90 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIK--HLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT 90 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhh--hhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence 4578999999999999999999998 599999998654321 111110 11246899999999999999999999999
Q ss_pred EecCCCCCC--CCCCch----------------------------h----------------------------------
Q 025065 84 FHTASPVIF--LSDNPQ----------------------------E---------------------------------- 99 (258)
Q Consensus 84 ih~a~~~~~--~~~~~~----------------------------~---------------------------------- 99 (258)
||+|+.... ...++. +
T Consensus 91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~ 170 (386)
T PLN02427 91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPC 170 (386)
T ss_pred EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccc
Confidence 999986432 111111 0
Q ss_pred ----------hHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCC---------CC-ccHHHHHHHHcCCC--CC
Q 025065 100 ----------WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI---------LN-FGAEVILNLINGDQ--SF 157 (258)
Q Consensus 100 ----------~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~---------~~-~~~~~~~~~~~g~~--~~ 157 (258)
.|+.+|.++|+++..++++++++++++||++||||+.... .. ....++..+..+++ ++
T Consensus 171 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 250 (386)
T PLN02427 171 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLV 250 (386)
T ss_pred ccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEE
Confidence 3999999999999998888899999999999999975310 01 12233445556652 33
Q ss_pred C---CCcceeeHHHHHHHHHHhhcCCC-CC-ceEEEe-C-CCcCHHHHHHHHHHhCCCCCC-CC------CCc-------
Q 025065 158 A---FPYIFVEIRDVVYAHIRALEVPK-AS-GRYLLA-G-SVAQHSDILKFLREHYPTLLR-SG------KLE------- 216 (258)
Q Consensus 158 ~---~~~~~i~v~D~a~~~~~~~~~~~-~~-~~~~~~-~-~~~t~~e~~~~i~~~~~~~~~-~~------~~~------- 216 (258)
+ +.++|+|++|+|++++.+++++. .. ++|+++ + +.+|+.|+++.+.+.+|.... +. ...
T Consensus 251 g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 330 (386)
T PLN02427 251 DGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEFYGE 330 (386)
T ss_pred CCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcccccCc
Confidence 3 67899999999999999998764 33 478665 4 489999999999999874211 10 000
Q ss_pred -cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHH
Q 025065 217 -EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 217 -~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
.........|++|+ +.|||+| ++++++|+++++|++.
T Consensus 331 ~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~ 370 (386)
T PLN02427 331 GYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHK 370 (386)
T ss_pred cccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHH
Confidence 01334567899999 7799999 9999999999999875
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=252.72 Aligned_cols=247 Identities=19% Similarity=0.169 Sum_probs=185.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~V 83 (258)
+++|+||||||+||||++++++|+++|++|++++|+...... ....+. ...++.++.+|+++.+++.+++++ +|+|
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPN-LFELLN-LAKKIEDHFGDIRDAAKLRKAIAEFKPEIV 79 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchh-HHHHHh-hcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence 356899999999999999999999999999999987654321 111111 123577899999999999998874 6999
Q ss_pred EecCCCCCC--CCCCch-----------------------------------------------------hhHHHHHHHH
Q 025065 84 FHTASPVIF--LSDNPQ-----------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 84 ih~a~~~~~--~~~~~~-----------------------------------------------------~~Y~~sK~~~ 108 (258)
||+|+.... ...++. ++|+.+|.++
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 159 (349)
T TIGR02622 80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACA 159 (349)
T ss_pred EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHH
Confidence 999985322 111111 4699999999
Q ss_pred HHHHHHHHHHc-------CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHHhh
Q 025065 109 EEAAWKFAKEN-------GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 109 e~~~~~~~~~~-------~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~~~ 177 (258)
|.+++.+++++ +++++++||+++|||++.......+.++.....|. ..++ +.++|+|++|+|++++.++
T Consensus 160 e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~ 239 (349)
T TIGR02622 160 ELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLA 239 (349)
T ss_pred HHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHH
Confidence 99999887654 89999999999999975432234556677777776 3333 8999999999999999887
Q ss_pred cCC-----CCCceEEEe-C--CCcCHHHHHHHHHHhCCCCCCCCCC-----ccCCCCccccCHHHH-HhcCCCc-cchhH
Q 025065 178 EVP-----KASGRYLLA-G--SVAQHSDILKFLREHYPTLLRSGKL-----EEKYQPTIKVSQERA-KSLGINF-TPWEV 242 (258)
Q Consensus 178 ~~~-----~~~~~~~~~-~--~~~t~~e~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~d~~k~-~~lg~~p-~~~~~ 242 (258)
++. ...+.|+++ + +++++.|+++.+.+.++..++.... .........+|++|+ +.|||+| +++++
T Consensus 240 ~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~ 319 (349)
T TIGR02622 240 EKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGWHPRWGLEE 319 (349)
T ss_pred HHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhCCCCCCCHHH
Confidence 642 124588665 2 6899999999999887643222111 122334567899999 7799999 99999
Q ss_pred HHHHHHHHHHHc
Q 025065 243 GVRGCIESLMEK 254 (258)
Q Consensus 243 ~l~~~~~~~~~~ 254 (258)
+|+++++|++..
T Consensus 320 gi~~~i~w~~~~ 331 (349)
T TIGR02622 320 AVSRTVDWYKAW 331 (349)
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=233.63 Aligned_cols=240 Identities=18% Similarity=0.228 Sum_probs=193.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+++|+||||.||||+||+..|..+||+|++++......+....... ....++.+.-|++.+ ++.++|-|+|+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~--~~~~fel~~hdv~~p-----l~~evD~IyhL 98 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI--GHPNFELIRHDVVEP-----LLKEVDQIYHL 98 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc--cCcceeEEEeechhH-----HHHHhhhhhhh
Confidence 45899999999999999999999999999999866544433222211 134566666666554 77889999999
Q ss_pred CCCCCCCC--CCch-------------------------------------------------------hhHHHHHHHHH
Q 025065 87 ASPVIFLS--DNPQ-------------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 87 a~~~~~~~--~~~~-------------------------------------------------------~~Y~~sK~~~e 109 (258)
|+..+... .++. +.|...|+.+|
T Consensus 99 Aapasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE 178 (350)
T KOG1429|consen 99 AAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAE 178 (350)
T ss_pred ccCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHH
Confidence 99865421 2222 78999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCccccCCcCCCCC-ccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCC
Q 025065 110 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILN-FGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKAS 183 (258)
Q Consensus 110 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~ 183 (258)
.++.+|.++.|+.+.|.|+++.|||...-... ..+.++.+.+.+. .+++ +.|+|+||.|++++++++++.+...
T Consensus 179 ~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~ 258 (350)
T KOG1429|consen 179 TLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRG 258 (350)
T ss_pred HHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999996554333 3456677777776 5666 9999999999999999999998766
Q ss_pred ceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHH
Q 025065 184 GRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 184 ~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
.+++++++.+|+.|+++.+.+..+....+.... +..+..+..|++++ +.|||.| .+++++|+.++.|++.
T Consensus 259 pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~ 332 (350)
T KOG1429|consen 259 PVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRE 332 (350)
T ss_pred CcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHH
Confidence 677888999999999999999996555444433 66778889999999 7799999 9999999999999975
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=256.38 Aligned_cols=239 Identities=18% Similarity=0.188 Sum_probs=180.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
.|||||||||||||++|+++|+++|++|++++|....... ...... ...+++++.+|+.+.. +.++|+|||+|
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~-~~~~~~-~~~~~~~~~~Di~~~~-----~~~~D~ViHlA 192 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKE-NLVHLF-GNPRFELIRHDVVEPI-----LLEVDQIYHLA 192 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHh-Hhhhhc-cCCceEEEECcccccc-----ccCCCEEEECc
Confidence 4789999999999999999999999999999986432211 111110 0236788889987753 46799999999
Q ss_pred CCCCC--CCCCch-------------------------------------------------------hhHHHHHHHHHH
Q 025065 88 SPVIF--LSDNPQ-------------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 88 ~~~~~--~~~~~~-------------------------------------------------------~~Y~~sK~~~e~ 110 (258)
+.... ...++. +.|+.+|..+|+
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~ 272 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET 272 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence 86432 112221 249999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCcCCCC-CccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFFQPIL-NFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
+++.+.++++++++++||+++|||+..... .....++.++..+. .+++ +.++|+|++|+++++..+++.. ..|
T Consensus 273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~-~~g 351 (436)
T PLN02166 273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE-HVG 351 (436)
T ss_pred HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-CCc
Confidence 999998888999999999999999864322 23455677777776 3344 6899999999999999999764 356
Q ss_pred eEE-EeCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 185 RYL-LAGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 185 ~~~-~~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+|+ ++++.+|+.|+++.+++.+|........+ ........+|++|+ +.|||+| ++++++|+++++|++.+
T Consensus 352 iyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~ 426 (436)
T PLN02166 352 PFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNR 426 (436)
T ss_pred eEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 885 45789999999999999987432111111 23335567899999 7799999 99999999999999764
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=251.67 Aligned_cols=245 Identities=16% Similarity=0.241 Sum_probs=182.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEE-EcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVF 84 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vi 84 (258)
|++|||||||||||++|+++|+++|++|+++ ++.........+.... ...++.++.+|++|.+.+.+++++ +|+||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi 79 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDCVM 79 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence 3689999999999999999999999876544 4432211111111110 123578899999999999999974 89999
Q ss_pred ecCCCCCCC--CC--------------------------------------------------------------Cchhh
Q 025065 85 HTASPVIFL--SD--------------------------------------------------------------NPQEW 100 (258)
Q Consensus 85 h~a~~~~~~--~~--------------------------------------------------------------~~~~~ 100 (258)
|+||..... .. .+.+.
T Consensus 80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~ 159 (355)
T PRK10217 80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSP 159 (355)
T ss_pred ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCCh
Confidence 999863210 00 00156
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHH
Q 025065 101 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~ 175 (258)
|+.+|.++|.+++.++++++++++++||+++|||++.+. .....++.+...+. ++++ +.++|+|++|+|+++..
T Consensus 160 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~ 238 (355)
T PRK10217 160 YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYC 238 (355)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHH
Confidence 999999999999999888999999999999999987532 23455566666665 3334 78999999999999999
Q ss_pred hhcCCCCCceEEE-eCCCcCHHHHHHHHHHhCCCCC--CCCC-------C---c--cCCCCccccCHHHH-HhcCCCc-c
Q 025065 176 ALEVPKASGRYLL-AGSVAQHSDILKFLREHYPTLL--RSGK-------L---E--EKYQPTIKVSQERA-KSLGINF-T 238 (258)
Q Consensus 176 ~~~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~--~~~~-------~---~--~~~~~~~~~d~~k~-~~lg~~p-~ 238 (258)
+++.....++|++ +++.+|+.|+++.+.+.++... .|.. . . +.....+.+|++|+ ++|||+| +
T Consensus 239 ~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~ 318 (355)
T PRK10217 239 VATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQE 318 (355)
T ss_pred HHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCcC
Confidence 9987655568855 5788999999999999886311 1110 0 0 22234567899999 7799999 9
Q ss_pred chhHHHHHHHHHHHHc
Q 025065 239 PWEVGVRGCIESLMEK 254 (258)
Q Consensus 239 ~~~~~l~~~~~~~~~~ 254 (258)
+++++|+++++|++.+
T Consensus 319 ~l~e~l~~~~~~~~~~ 334 (355)
T PRK10217 319 TFESGMRKTVQWYLAN 334 (355)
T ss_pred cHHHHHHHHHHHHHhC
Confidence 9999999999999875
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=249.84 Aligned_cols=240 Identities=18% Similarity=0.140 Sum_probs=181.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+|+|||||||||||++|+++|.++||+|++++|....... .. ....+++.+|+++.+.+.+++.++|+|||+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~----~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 92 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS----ED---MFCHEFHLVDLRVMENCLKVTKGVDHVFNL 92 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc----cc---cccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence 36899999999999999999999999999999986432111 00 113578899999999898888899999999
Q ss_pred CCCCCC---CCCCch---------------------------------------------------------hhHHHHHH
Q 025065 87 ASPVIF---LSDNPQ---------------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 87 a~~~~~---~~~~~~---------------------------------------------------------~~Y~~sK~ 106 (258)
|+.... ...++. +.|+.+|.
T Consensus 93 Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~ 172 (370)
T PLN02695 93 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 172 (370)
T ss_pred ccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHH
Confidence 986421 111110 36999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC---CccHHHHHHHHcCC---CCCC---CCcceeeHHHHHHHHHHhh
Q 025065 107 LAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 107 ~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~g~---~~~~---~~~~~i~v~D~a~~~~~~~ 177 (258)
++|+++..+..+++++++++||+++|||+..... .....++.++..+. .+++ +.++|+|++|+++++..++
T Consensus 173 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~ 252 (370)
T PLN02695 173 ATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLT 252 (370)
T ss_pred HHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHH
Confidence 9999999998888999999999999999754321 11234555555532 3333 6899999999999999988
Q ss_pred cCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCCC-CCCCCccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHH
Q 025065 178 EVPKASGRY-LLAGSVAQHSDILKFLREHYPTLL-RSGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 178 ~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
+.+ ..+.| +++++.+|++|+++.+.+..|... +.....+........|++|+ +.|||+| ++++++|+++++|++.
T Consensus 253 ~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~ 331 (370)
T PLN02695 253 KSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKE 331 (370)
T ss_pred hcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCCCccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 765 34677 555789999999999999887421 11111122223456899999 7799999 8999999999999976
Q ss_pred c
Q 025065 254 K 254 (258)
Q Consensus 254 ~ 254 (258)
+
T Consensus 332 ~ 332 (370)
T PLN02695 332 Q 332 (370)
T ss_pred H
Confidence 4
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=254.78 Aligned_cols=240 Identities=18% Similarity=0.208 Sum_probs=179.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
++|||||||||||||++|+++|+++|++|++++|............. ...+++++.+|+.++. +.++|+|||+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l~~~D~ViHl 190 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----LLEVDQIYHL 190 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----hcCCCEEEEe
Confidence 56899999999999999999999999999999875432211111111 1246888899987753 4579999999
Q ss_pred CCCCCC--CCCCch-------------------------------------------------------hhHHHHHHHHH
Q 025065 87 ASPVIF--LSDNPQ-------------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 87 a~~~~~--~~~~~~-------------------------------------------------------~~Y~~sK~~~e 109 (258)
|+.... ...++. +.|+.+|.++|
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE 270 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAE 270 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHH
Confidence 986532 111222 24999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCccccCCcCCCC-CccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCC
Q 025065 110 EAAWKFAKENGIDLVAIHPGTVIGPFFQPIL-NFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKAS 183 (258)
Q Consensus 110 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~ 183 (258)
+++..+.++++++++++||+++|||+..... .....++.+++.++ .+++ +.++|+|++|+|++++.++++. ..
T Consensus 271 ~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~-~~ 349 (442)
T PLN02206 271 TLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-HV 349 (442)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-CC
Confidence 9999998888999999999999999754221 23445666766666 3333 6889999999999999999765 45
Q ss_pred ceE-EEeCCCcCHHHHHHHHHHhCCCCC-CCCCC-ccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 184 GRY-LLAGSVAQHSDILKFLREHYPTLL-RSGKL-EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 184 ~~~-~~~~~~~t~~e~~~~i~~~~~~~~-~~~~~-~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
|.| +++++.+|+.|+++.+++.++... +.... .........+|++|+ ++|||+| ++++++|+++++|++..
T Consensus 350 g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~ 425 (442)
T PLN02206 350 GPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQR 425 (442)
T ss_pred ceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 678 455789999999999999986321 11111 122345567899999 7799999 99999999999999764
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=249.78 Aligned_cols=241 Identities=17% Similarity=0.260 Sum_probs=181.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCC-CcccHHHHhCCCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~Vih 85 (258)
||+|||||||||||++|+++|+++ |++|++++|+.... ..+.. ..+++++.+|++ +.+.+.++++++|+|||
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~--~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH 74 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL--GDLVN----HPRMHFFEGDITINKEWIEYHVKKCDVILP 74 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH--HHhcc----CCCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence 368999999999999999999986 69999999865321 11111 146899999998 67778888899999999
Q ss_pred cCCCCCC--CCCCch---------------------------------------------------------hhHHHHHH
Q 025065 86 TASPVIF--LSDNPQ---------------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 86 ~a~~~~~--~~~~~~---------------------------------------------------------~~Y~~sK~ 106 (258)
+|+.... ...++. +.|+.+|.
T Consensus 75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~ 154 (347)
T PRK11908 75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ 154 (347)
T ss_pred CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence 9986432 112211 15999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCCccccCCcCCC-------CCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHH
Q 025065 107 LAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHI 174 (258)
Q Consensus 107 ~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~ 174 (258)
++|+.++.++.+++++++++||+++|||+..+. ......++.++..|+ .+++ +.++|+|++|++++++
T Consensus 155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~ 234 (347)
T PRK11908 155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALM 234 (347)
T ss_pred HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHH
Confidence 999999999888999999999999999985431 122345666666776 2332 7899999999999999
Q ss_pred HhhcCCC--C-CceEEEeC--CCcCHHHHHHHHHHhCCCCCCC------C--CC-c--------cCCCCccccCHHHH-H
Q 025065 175 RALEVPK--A-SGRYLLAG--SVAQHSDILKFLREHYPTLLRS------G--KL-E--------EKYQPTIKVSQERA-K 231 (258)
Q Consensus 175 ~~~~~~~--~-~~~~~~~~--~~~t~~e~~~~i~~~~~~~~~~------~--~~-~--------~~~~~~~~~d~~k~-~ 231 (258)
.+++++. . +++|++++ ..+|++|+++.+.+.++..+-. . .. . .........|++|+ +
T Consensus 235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 314 (347)
T PRK11908 235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQ 314 (347)
T ss_pred HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCChHHHHH
Confidence 9998763 2 44886654 4799999999999988743210 0 00 0 01223455789999 7
Q ss_pred hcCCCc-cchhHHHHHHHHHHHHc
Q 025065 232 SLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 232 ~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
.|||+| ++++++++++++|++.+
T Consensus 315 ~lGw~p~~~l~~~l~~~~~~~~~~ 338 (347)
T PRK11908 315 ELGWAPKTTMDDALRRIFEAYRGH 338 (347)
T ss_pred HcCCCCCCcHHHHHHHHHHHHHHH
Confidence 899999 99999999999999864
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=255.28 Aligned_cols=249 Identities=16% Similarity=0.135 Sum_probs=183.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc---------------hhhcccc-CcCCcEEEEEccCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT---------------EHLRELD-GATERLHLFKANLLE 69 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~~~~-~~~~~~~~~~~Dl~~ 69 (258)
.++|+||||||+||||++|+++|+++|++|+++++....... ..+..+. ....+++++.+|++|
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d 124 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD 124 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence 467899999999999999999999999999998753221100 0000000 001368899999999
Q ss_pred cccHHHHhC--CCcEEEecCCCCCC--CCCCc---h--------------------------------------------
Q 025065 70 EGSFDSAVD--GCDGVFHTASPVIF--LSDNP---Q-------------------------------------------- 98 (258)
Q Consensus 70 ~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~---~-------------------------------------------- 98 (258)
.+.+.++++ ++|+|||+|+.... ...++ .
T Consensus 125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~~E 204 (442)
T PLN02572 125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIEE 204 (442)
T ss_pred HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCCcc
Confidence 999999987 48999999976432 11111 0
Q ss_pred ---------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC----------------C
Q 025065 99 ---------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL----------------N 141 (258)
Q Consensus 99 ---------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~----------------~ 141 (258)
++|+.+|.++|.++..+++.+|++++++||++||||++.... .
T Consensus 205 ~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~ 284 (442)
T PLN02572 205 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGT 284 (442)
T ss_pred cccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhh
Confidence 149999999999999999999999999999999999864310 1
Q ss_pred ccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc---eEEEeCCCcCHHHHHHHHHHh---CCCC-
Q 025065 142 FGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG---RYLLAGSVAQHSDILKFLREH---YPTL- 209 (258)
Q Consensus 142 ~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~---~~~~~~~~~t~~e~~~~i~~~---~~~~- 209 (258)
....++.+...|+ .+++ +.++|+||+|+|++++.+++++...| +|+++++.+|+.|+++.+.+. +|..
T Consensus 285 ~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~~~~~g~~~ 364 (442)
T PLN02572 285 ALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKAGEKLGLDV 364 (442)
T ss_pred HHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHHHHhhCCCC
Confidence 2234455666676 3444 78999999999999999998753333 677767889999999999998 6632
Q ss_pred CC---CCCCccCCCCccccCHHHHHhcCCCc-c---chhHHHHHHHHHHHHc
Q 025065 210 LR---SGKLEEKYQPTIKVSQERAKSLGINF-T---PWEVGVRGCIESLMEK 254 (258)
Q Consensus 210 ~~---~~~~~~~~~~~~~~d~~k~~~lg~~p-~---~~~~~l~~~~~~~~~~ 254 (258)
.+ |.............|.+|+++|||+| + ++++++.+++.||+.+
T Consensus 365 ~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~ 416 (442)
T PLN02572 365 EVISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDR 416 (442)
T ss_pred CeeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence 11 11111223335667899996699999 7 8999999999999865
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=247.16 Aligned_cols=244 Identities=18% Similarity=0.186 Sum_probs=182.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc----C-cCCcEEEEEccCCCcccHHHHhCC--Cc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD----G-ATERLHLFKANLLEEGSFDSAVDG--CD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~~--~d 81 (258)
|+||||||+||||++|+++|+++|++|++++|++.......+..+. . ...+++++.+|++|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999876432111111110 0 023588999999999999999984 69
Q ss_pred EEEecCCCCCCC--CCCch------------------------------------------------------hhHHHHH
Q 025065 82 GVFHTASPVIFL--SDNPQ------------------------------------------------------EWYSLAK 105 (258)
Q Consensus 82 ~Vih~a~~~~~~--~~~~~------------------------------------------------------~~Y~~sK 105 (258)
+|||+|+..+.. ...+. ++|+.||
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK 160 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK 160 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence 999999974321 11111 6799999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCC-C-CccHHHHHHHHcCC-C--CCC---CCcceeeHHHHHHHHHHhh
Q 025065 106 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-L-NFGAEVILNLINGD-Q--SFA---FPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 106 ~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~-~~~~~~~~~~~~g~-~--~~~---~~~~~i~v~D~a~~~~~~~ 177 (258)
.++|.+++.+++++++++++.|+.++|||+.... . .....++.++..|. . .++ +.++|+|++|+|++++.++
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~ 240 (343)
T TIGR01472 161 LYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLML 240 (343)
T ss_pred HHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHH
Confidence 9999999999988899999999999999964322 1 11233344555565 2 223 7899999999999999999
Q ss_pred cCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCCCCC--------------------CCC---ccCCCCccccCHHHH-Hh
Q 025065 178 EVPKASGRY-LLAGSVAQHSDILKFLREHYPTLLRS--------------------GKL---EEKYQPTIKVSQERA-KS 232 (258)
Q Consensus 178 ~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~~--------------------~~~---~~~~~~~~~~d~~k~-~~ 232 (258)
+++. .+.| +++++++|+.|+++.+.+.+|....+ ... .+........|++|+ ++
T Consensus 241 ~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 319 (343)
T TIGR01472 241 QQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEK 319 (343)
T ss_pred hcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHHHHHHh
Confidence 8754 4677 56689999999999999998742100 000 022233446799999 78
Q ss_pred cCCCc-cchhHHHHHHHHHHHH
Q 025065 233 LGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 233 lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
|||+| ++++++|+++++++++
T Consensus 320 lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 320 LGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred hCCCCCCCHHHHHHHHHHHHHh
Confidence 99999 9999999999998874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=266.73 Aligned_cols=247 Identities=18% Similarity=0.256 Sum_probs=186.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc-HHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS-FDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~V 83 (258)
.++|+|||||||||||++|+++|+++ ||+|++++|....... +.. ..+++++.+|+++.+. +.++++++|+|
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~--~~~----~~~~~~~~gDl~d~~~~l~~~l~~~D~V 386 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR--FLG----HPRFHFVEGDISIHSEWIEYHIKKCDVV 386 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh--hcC----CCceEEEeccccCcHHHHHHHhcCCCEE
Confidence 46789999999999999999999986 7999999987643211 111 2468999999998765 56788899999
Q ss_pred EecCCCCCC--CCCCch---------------------------------------------------------hhHHHH
Q 025065 84 FHTASPVIF--LSDNPQ---------------------------------------------------------EWYSLA 104 (258)
Q Consensus 84 ih~a~~~~~--~~~~~~---------------------------------------------------------~~Y~~s 104 (258)
||+|+.... ...++. +.|+.+
T Consensus 387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~s 466 (660)
T PRK08125 387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVS 466 (660)
T ss_pred EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHH
Confidence 999987542 111111 149999
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCC-------CCccHHHHHHHHcCCC--CCC---CCcceeeHHHHHHH
Q 025065 105 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGDQ--SFA---FPYIFVEIRDVVYA 172 (258)
Q Consensus 105 K~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~g~~--~~~---~~~~~i~v~D~a~~ 172 (258)
|.++|++++.+.++++++++++||+++|||+.... ......++.++..+++ .++ +.++|+|++|+|++
T Consensus 467 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a 546 (660)
T PRK08125 467 KQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEA 546 (660)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHH
Confidence 99999999999888899999999999999976431 1224556666666662 233 78999999999999
Q ss_pred HHHhhcCCC--C-CceEEEe-CC-CcCHHHHHHHHHHhCCCCC----CCCCCc-------------cCCCCccccCHHHH
Q 025065 173 HIRALEVPK--A-SGRYLLA-GS-VAQHSDILKFLREHYPTLL----RSGKLE-------------EKYQPTIKVSQERA 230 (258)
Q Consensus 173 ~~~~~~~~~--~-~~~~~~~-~~-~~t~~e~~~~i~~~~~~~~----~~~~~~-------------~~~~~~~~~d~~k~ 230 (258)
++.+++++. . +++|+++ ++ .+|++|+++.+.+.+|..+ +|.... ........+|++|+
T Consensus 547 ~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka 626 (660)
T PRK08125 547 LFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNA 626 (660)
T ss_pred HHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCCChHHH
Confidence 999998753 2 3478655 54 7999999999999987422 111100 01223456799999
Q ss_pred -HhcCCCc-cchhHHHHHHHHHHHHcCCCC
Q 025065 231 -KSLGINF-TPWEVGVRGCIESLMEKGFLS 258 (258)
Q Consensus 231 -~~lg~~p-~~~~~~l~~~~~~~~~~~~~~ 258 (258)
+.|||+| ++++++|+++++|++++.-|+
T Consensus 627 ~~~LGw~P~~~lee~l~~~i~~~~~~~~~~ 656 (660)
T PRK08125 627 RRLLDWEPKIDMQETIDETLDFFLRTVDLT 656 (660)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHhccccc
Confidence 7799999 999999999999999887653
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=264.12 Aligned_cols=247 Identities=19% Similarity=0.233 Sum_probs=186.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh--CCCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV--DGCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~ 82 (258)
++|+|||||||||||++|+++|+++ +++|++++|.........+... ....+++++.+|++|.+.+..++ .++|+
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS-KSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc-ccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 5689999999999999999999988 6899999875321111111110 01247899999999998887766 57999
Q ss_pred EEecCCCCCCCC--CCch-------------------------------------------------------hhHHHHH
Q 025065 83 VFHTASPVIFLS--DNPQ-------------------------------------------------------EWYSLAK 105 (258)
Q Consensus 83 Vih~a~~~~~~~--~~~~-------------------------------------------------------~~Y~~sK 105 (258)
|||+|+...... .++. ++|+.+|
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK 163 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK 163 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence 999999753211 1100 4699999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCC
Q 025065 106 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.++|++++.+.++++++++++||++||||++... ...+.++.....|. ++++ +.++|+|++|+|+++..++++.
T Consensus 164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~ 242 (668)
T PLN02260 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 242 (668)
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC
Confidence 9999999999888899999999999999986532 23344555556665 3333 6889999999999999999876
Q ss_pred CCCceEEE-eCCCcCHHHHHHHHHHhCCCCCCC---CCC-ccCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 181 KASGRYLL-AGSVAQHSDILKFLREHYPTLLRS---GKL-EEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 181 ~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~---~~~-~~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
...++|++ +++.+|+.|+++.+++.+|..... ... .+.....+.+|++|+++|||+| ++++++++++++|++++
T Consensus 243 ~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~ 322 (668)
T PLN02260 243 EVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSN 322 (668)
T ss_pred CCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhC
Confidence 66678855 578899999999999999753211 100 1223345668999997799999 99999999999999876
Q ss_pred C
Q 025065 255 G 255 (258)
Q Consensus 255 ~ 255 (258)
+
T Consensus 323 ~ 323 (668)
T PLN02260 323 P 323 (668)
T ss_pred h
Confidence 4
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=238.36 Aligned_cols=241 Identities=30% Similarity=0.453 Sum_probs=186.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|+|+||||+||||++++++|+++|++|++++|++..... +. ..+++++.+|+++.+++.++++++|+|||+|+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~-----~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN--LE-----GLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc--cc-----cCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 479999999999999999999999999999997654211 11 13588999999999999999999999999997
Q ss_pred CCCCCCCCch-------------------------------------------------------hhHHHHHHHHHHHHH
Q 025065 89 PVIFLSDNPQ-------------------------------------------------------EWYSLAKTLAEEAAW 113 (258)
Q Consensus 89 ~~~~~~~~~~-------------------------------------------------------~~Y~~sK~~~e~~~~ 113 (258)
........+. +.|+.+|.++|++++
T Consensus 74 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~ 153 (328)
T TIGR03466 74 DYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAAL 153 (328)
T ss_pred ecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHH
Confidence 5322111111 259999999999999
Q ss_pred HHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcCCCCCceEEEeCC
Q 025065 114 KFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGS 191 (258)
Q Consensus 114 ~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~ 191 (258)
.+..+++++++++||+++||++...... ....+.....+. +.+. ...+|+|++|+|+++..+++++..+..|+++++
T Consensus 154 ~~~~~~~~~~~ilR~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~ 232 (328)
T TIGR03466 154 EMAAEKGLPVVIVNPSTPIGPRDIKPTP-TGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERYILGGE 232 (328)
T ss_pred HHHHhcCCCEEEEeCCccCCCCCCCCCc-HHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCceEEecCC
Confidence 9988889999999999999997653221 223344444444 3333 567999999999999999988654447887889
Q ss_pred CcCHHHHHHHHHHhCCCCC----CCCCCc--------------cCC-----------CCccccCHHHH-HhcCCCccchh
Q 025065 192 VAQHSDILKFLREHYPTLL----RSGKLE--------------EKY-----------QPTIKVSQERA-KSLGINFTPWE 241 (258)
Q Consensus 192 ~~t~~e~~~~i~~~~~~~~----~~~~~~--------------~~~-----------~~~~~~d~~k~-~~lg~~p~~~~ 241 (258)
.+|+.|+++.+.+.+|... +|.... ... ..+..+|++|+ +.|||+|++++
T Consensus 233 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~ 312 (328)
T TIGR03466 233 NLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQRPAR 312 (328)
T ss_pred CcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCcCHH
Confidence 9999999999999987431 221100 000 13567899999 88999999999
Q ss_pred HHHHHHHHHHHHcCCC
Q 025065 242 VGVRGCIESLMEKGFL 257 (258)
Q Consensus 242 ~~l~~~~~~~~~~~~~ 257 (258)
+++++++.|++.+|.|
T Consensus 313 ~~i~~~~~~~~~~~~~ 328 (328)
T TIGR03466 313 EALRDAVEWFRANGYL 328 (328)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999999998875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=239.69 Aligned_cols=244 Identities=17% Similarity=0.241 Sum_probs=184.0
Q ss_pred EEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEEe
Q 025065 10 VVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFH 85 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih 85 (258)
+|||||||||||++|+++|+++| ++|++++|.......+.+..+.. ..++.++.+|+++++++.+++++ +|+|||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 79 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEHQPDAVVH 79 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence 58999999999999999999987 78998876432211111111111 23678899999999999999987 999999
Q ss_pred cCCCCCCC--CCCch-----------------------------------------------------hhHHHHHHHHHH
Q 025065 86 TASPVIFL--SDNPQ-----------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 86 ~a~~~~~~--~~~~~-----------------------------------------------------~~Y~~sK~~~e~ 110 (258)
+|+..... ...+. +.|+.+|..+|.
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 159 (317)
T TIGR01181 80 FAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDH 159 (317)
T ss_pred cccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHH
Confidence 99864321 00000 369999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCce
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGR 185 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~ 185 (258)
+++.++.+.+++++++||+.+|||..... ...+.++.++..+. +.++ +.++|+|++|+|+++..++++...+++
T Consensus 160 ~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 238 (317)
T TIGR01181 160 LVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGET 238 (317)
T ss_pred HHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCCCce
Confidence 99999888899999999999999975432 23445566666665 2333 678999999999999999987655568
Q ss_pred EEE-eCCCcCHHHHHHHHHHhCCCCCCC-CCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHcC
Q 025065 186 YLL-AGSVAQHSDILKFLREHYPTLLRS-GKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKG 255 (258)
Q Consensus 186 ~~~-~~~~~t~~e~~~~i~~~~~~~~~~-~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~~ 255 (258)
|++ +++.+|+.|+++.+.+.+|..+.. .... ........+|++|+ +.|||+| ++++++++++++|+++++
T Consensus 239 ~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~ 314 (317)
T TIGR01181 239 YNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNE 314 (317)
T ss_pred EEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 855 578999999999999999753211 1111 12223446899999 7899999 899999999999998864
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=239.92 Aligned_cols=248 Identities=19% Similarity=0.144 Sum_probs=184.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc----CcCCcEEEEEccCCCcccHHHHhCC--
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD----GATERLHLFKANLLEEGSFDSAVDG-- 79 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~-- 79 (258)
.++|+||||||+||||++|+++|+++|++|++++|++.......++.+. ....++.++.+|++|.+.+.++++.
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 3568999999999999999999999999999999876432111111110 1124588999999999999998874
Q ss_pred CcEEEecCCCCCCC--CCCch-------------------------------------------------------hhHH
Q 025065 80 CDGVFHTASPVIFL--SDNPQ-------------------------------------------------------EWYS 102 (258)
Q Consensus 80 ~d~Vih~a~~~~~~--~~~~~-------------------------------------------------------~~Y~ 102 (258)
+|+|||+|+..+.. ..++. +.|+
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~ 163 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYA 163 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhH
Confidence 79999999974321 11111 4699
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC-C-ccHHHHHHHHcCC--CCC-C---CCcceeeHHHHHHHHH
Q 025065 103 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL-N-FGAEVILNLINGD--QSF-A---FPYIFVEIRDVVYAHI 174 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~-~~~~~~~~~~~g~--~~~-~---~~~~~i~v~D~a~~~~ 174 (258)
.+|.++|.+++.+++++++.++..|+.++|||+..... . ....++.++..+. .++ + +.++|+|++|+|++++
T Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~ 243 (340)
T PLN02653 164 VAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMW 243 (340)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHH
Confidence 99999999999999889999999999999999644321 1 1122233444565 233 3 7899999999999999
Q ss_pred HhhcCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCC---CCCCCC---ccCCCCccccCHHHH-HhcCCCc-cchhHHHH
Q 025065 175 RALEVPKASGRY-LLAGSVAQHSDILKFLREHYPTL---LRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVR 245 (258)
Q Consensus 175 ~~~~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~---~~~~~~---~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~ 245 (258)
.++++.. .+.| +++++++|+.|+++.+.+.+|.. .+.... .+.......+|++|+ +.|||+| ++++++|+
T Consensus 244 ~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~ 322 (340)
T PLN02653 244 LMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKVGFEQLVK 322 (340)
T ss_pred HHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhCCCCCCCHHHHHH
Confidence 9998753 4667 66688999999999999998742 111111 122334556899999 7799999 99999999
Q ss_pred HHHHHHHHc
Q 025065 246 GCIESLMEK 254 (258)
Q Consensus 246 ~~~~~~~~~ 254 (258)
++++|+++.
T Consensus 323 ~~~~~~~~~ 331 (340)
T PLN02653 323 MMVDEDLEL 331 (340)
T ss_pred HHHHHHHHh
Confidence 999998753
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=238.46 Aligned_cols=244 Identities=18% Similarity=0.279 Sum_probs=180.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCE-EEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEe
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 85 (258)
||||||||+||||++|+++|+++|++ |+++++............+. ...++.++.+|++|.+++.++++ ++|+|||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVS-DSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcc-cCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 47999999999999999999999975 55555533211111111111 02357889999999999999886 4899999
Q ss_pred cCCCCCCC---------------------------------------------C-----C--------------------
Q 025065 86 TASPVIFL---------------------------------------------S-----D-------------------- 95 (258)
Q Consensus 86 ~a~~~~~~---------------------------------------------~-----~-------------------- 95 (258)
+|+..... . .
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 99853110 0 0
Q ss_pred --CchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHH
Q 025065 96 --NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRD 168 (258)
Q Consensus 96 --~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D 168 (258)
.+.+.|+.+|.++|.+++.++++++++++++|+++||||++... .....++..+..+. ++++ +.++|+|++|
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D 238 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHH
Confidence 01157999999999999999888999999999999999986432 23455566666665 3443 7899999999
Q ss_pred HHHHHHHhhcCCCCCceEEE-eCCCcCHHHHHHHHHHhCCCC-C--CCCC--Cc-----cCCCCccccCHHHH-HhcCCC
Q 025065 169 VVYAHIRALEVPKASGRYLL-AGSVAQHSDILKFLREHYPTL-L--RSGK--LE-----EKYQPTIKVSQERA-KSLGIN 236 (258)
Q Consensus 169 ~a~~~~~~~~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~-~--~~~~--~~-----~~~~~~~~~d~~k~-~~lg~~ 236 (258)
+|+++..+++++...+.|++ +++..|+.|+++.+++.++.. + .+.. .. +.....+.+|++|+ +.+||+
T Consensus 239 ~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~ 318 (352)
T PRK10084 239 HARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKISRELGWK 318 (352)
T ss_pred HHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHHHHHcCCC
Confidence 99999999987655568855 578899999999999988642 1 1100 00 12233557899999 779999
Q ss_pred c-cchhHHHHHHHHHHHHc
Q 025065 237 F-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 237 p-~~~~~~l~~~~~~~~~~ 254 (258)
| ++++++|+++++|++++
T Consensus 319 p~~~l~~~l~~~~~~~~~~ 337 (352)
T PRK10084 319 PQETFESGIRKTVEWYLAN 337 (352)
T ss_pred CcCCHHHHHHHHHHHHHhC
Confidence 9 99999999999999875
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=222.43 Aligned_cols=246 Identities=20% Similarity=0.245 Sum_probs=189.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~ 82 (258)
..++++||||.||||++.+..+...- ++.+.++.-.--.....+.... ..++.+++.+|+.+...+..++. .+|.
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR-NSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc-cCCCceEeeccccchHHHHhhhccCchhh
Confidence 34789999999999999999999863 5666665422111122222222 25789999999999988888775 5899
Q ss_pred EEecCCCCCC--CCCCch-----------------------------------------------------hhHHHHHHH
Q 025065 83 VFHTASPVIF--LSDNPQ-----------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 83 Vih~a~~~~~--~~~~~~-----------------------------------------------------~~Y~~sK~~ 107 (258)
|+|+|+..+. +..++. ++|+.+|++
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaA 163 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAA 163 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHH
Confidence 9999998654 222222 899999999
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCC
Q 025065 108 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 108 ~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
||..+++|..+++++++++|.++||||++.+. ...+.++.....++ ++-+ +.++|+|++|+++++..+++....
T Consensus 164 aE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~ 242 (331)
T KOG0747|consen 164 AEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGEL 242 (331)
T ss_pred HHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999987754 34556666555555 4444 899999999999999999999665
Q ss_pred CceE-EEeCCCcCHHHHHHHHHHhCCC----CC---CCCCCc--cCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHH
Q 025065 183 SGRY-LLAGSVAQHSDILKFLREHYPT----LL---RSGKLE--EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESL 251 (258)
Q Consensus 183 ~~~~-~~~~~~~t~~e~~~~i~~~~~~----~~---~~~~~~--~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~ 251 (258)
+.+| ++++.+.+..|+++.+.+.+.. .. .+.... +....++.+|.+|++.|||+| +++++||+.+++|+
T Consensus 243 geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y 322 (331)
T KOG0747|consen 243 GEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWY 322 (331)
T ss_pred cceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcHHHHHHHHHHHH
Confidence 6689 5668899999999988887632 11 111111 455567889999999999999 99999999999999
Q ss_pred HHc
Q 025065 252 MEK 254 (258)
Q Consensus 252 ~~~ 254 (258)
.++
T Consensus 323 ~~~ 325 (331)
T KOG0747|consen 323 TKN 325 (331)
T ss_pred Hhh
Confidence 764
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=235.73 Aligned_cols=248 Identities=19% Similarity=0.178 Sum_probs=179.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhcccc-CcCCcEEEEEccCCCcccHHHHhC--CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELD-GATERLHLFKANLLEEGSFDSAVD--GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~--~~d 81 (258)
++++|+|||||||||++|+++|+++|++|++++|....... ....... ....++.++.+|+++++.+.++++ ++|
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d 83 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD 83 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence 46899999999999999999999999999999876433211 1111110 012467899999999999998886 589
Q ss_pred EEEecCCCCCCCC--CCch---------------------------------------------------hhHHHHHHHH
Q 025065 82 GVFHTASPVIFLS--DNPQ---------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 82 ~Vih~a~~~~~~~--~~~~---------------------------------------------------~~Y~~sK~~~ 108 (258)
+|||+|+...... .++. +.|+.+|.++
T Consensus 84 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~ 163 (352)
T PLN02240 84 AVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFI 163 (352)
T ss_pred EEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 9999998643211 1111 5699999999
Q ss_pred HHHHHHHHHH-cCCcEEEEcCCccccCCcCC------C--CCccHHHHHHHHcCC-CCC-----------C-CCcceeeH
Q 025065 109 EEAAWKFAKE-NGIDLVAIHPGTVIGPFFQP------I--LNFGAEVILNLINGD-QSF-----------A-FPYIFVEI 166 (258)
Q Consensus 109 e~~~~~~~~~-~~~~~~ilRp~~v~G~~~~~------~--~~~~~~~~~~~~~g~-~~~-----------~-~~~~~i~v 166 (258)
|++++.++.. .+++++++|++++||++... . ......++.++..++ +.+ + +.++|+|+
T Consensus 164 e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 243 (352)
T PLN02240 164 EEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHV 243 (352)
T ss_pred HHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEH
Confidence 9999988754 57999999999999975321 0 111223444444443 211 2 67899999
Q ss_pred HHHHHHHHHhhcCC----CCC-ceEE-EeCCCcCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccCHHHH-HhcCCC
Q 025065 167 RDVVYAHIRALEVP----KAS-GRYL-LAGSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERA-KSLGIN 236 (258)
Q Consensus 167 ~D~a~~~~~~~~~~----~~~-~~~~-~~~~~~t~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~-~~lg~~ 236 (258)
+|+|++++.++++. ... ++|+ ++++.+|++|+++.+.+.+|.. .+.... .........|++|+ +.|||+
T Consensus 244 ~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~ 322 (352)
T PLN02240 244 MDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKK-IPLKLAPRRPGDAEEVYASTEKAEKELGWK 322 (352)
T ss_pred HHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCC-CCceeCCCCCCChhhhhcCHHHHHHHhCCC
Confidence 99999999888642 233 4785 4589999999999999998742 122111 22233445799999 779999
Q ss_pred c-cchhHHHHHHHHHHHHcC
Q 025065 237 F-TPWEVGVRGCIESLMEKG 255 (258)
Q Consensus 237 p-~~~~~~l~~~~~~~~~~~ 255 (258)
| ++++++|+++++|+++++
T Consensus 323 p~~~l~~~l~~~~~~~~~~~ 342 (352)
T PLN02240 323 AKYGIDEMCRDQWNWASKNP 342 (352)
T ss_pred CCCCHHHHHHHHHHHHHhCc
Confidence 9 899999999999999875
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=233.69 Aligned_cols=230 Identities=18% Similarity=0.193 Sum_probs=164.1
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc---cc-HHHHhC-----CCc
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE---GS-FDSAVD-----GCD 81 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~-~~~~~~-----~~d 81 (258)
||||||+||||++|+++|+++|++++++.|+..+... . ..+..+|+.|. ++ +.+++. ++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~--~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d 70 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--F---------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIE 70 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH--H---------HhhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence 8999999999999999999999987777665433211 0 11223455443 33 233332 689
Q ss_pred EEEecCCCCCCCCCCch--------------------------------------------------hhHHHHHHHHHHH
Q 025065 82 GVFHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 82 ~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~~e~~ 111 (258)
+|||+|+........+. ++|+.+|.++|++
T Consensus 71 ~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 150 (308)
T PRK11150 71 AIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEY 150 (308)
T ss_pred EEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHH
Confidence 99999986433221211 5799999999999
Q ss_pred HHHHHHHcCCcEEEEcCCccccCCcCCCC--Cc-cHHHHHHHHcCC-C-CCC----CCcceeeHHHHHHHHHHhhcCCCC
Q 025065 112 AWKFAKENGIDLVAIHPGTVIGPFFQPIL--NF-GAEVILNLINGD-Q-SFA----FPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 112 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~-~~~~~~~~~~g~-~-~~~----~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
++.+..+++++++++||+++|||+..... .. ...+..++..|. + +++ ..++|+|++|+|++++.+++.. .
T Consensus 151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~-~ 229 (308)
T PRK11150 151 VRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG-V 229 (308)
T ss_pred HHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC-C
Confidence 99998888999999999999999865421 11 123335566665 2 332 4689999999999999998874 3
Q ss_pred CceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCC-cc----CCCCccccCHHHHHhcCCCc--cchhHHHHHHHHHHH
Q 025065 183 SGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKL-EE----KYQPTIKVSQERAKSLGINF--TPWEVGVRGCIESLM 252 (258)
Q Consensus 183 ~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~-~~----~~~~~~~~d~~k~~~lg~~p--~~~~~~l~~~~~~~~ 252 (258)
.++|++ +++.+|+.|+++.+.+.++...+.... +. .......+|++|++.+||+| ++++++|+++++|+.
T Consensus 230 ~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 230 SGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred CCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence 568855 577899999999999998742221111 11 11234568999996689997 499999999999975
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=227.88 Aligned_cols=243 Identities=19% Similarity=0.177 Sum_probs=175.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 84 (258)
|+||||||+||||++|+++|+++|++|++++|....... ..+.... ..++.++.+|+++++.+.+++. ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc--CCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 479999999999999999999999999998765432211 1111111 2356788999999999998886 589999
Q ss_pred ecCCCCCCC--CCCc----------------------------------------------------hhhHHHHHHHHHH
Q 025065 85 HTASPVIFL--SDNP----------------------------------------------------QEWYSLAKTLAEE 110 (258)
Q Consensus 85 h~a~~~~~~--~~~~----------------------------------------------------~~~Y~~sK~~~e~ 110 (258)
|+|+..... ...+ .+.|+.+|.++|+
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~ 158 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ 158 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHH
Confidence 999864321 0000 1468999999999
Q ss_pred HHHHHHHHc-CCcEEEEcCCccccCCcCCC--------CCccHHHHHHHHcCC-CC-------C----C-CCcceeeHHH
Q 025065 111 AAWKFAKEN-GIDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGD-QS-------F----A-FPYIFVEIRD 168 (258)
Q Consensus 111 ~~~~~~~~~-~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~g~-~~-------~----~-~~~~~i~v~D 168 (258)
+++.++++. +++++++|++++||+..... .......+.++..+. .. + + +.++|+|++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D 238 (338)
T PRK10675 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_pred HHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHH
Confidence 999987654 89999999999999742110 011223344444433 21 1 1 5789999999
Q ss_pred HHHHHHHhhcCC--CCC-ceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCC-c--cCCCCccccCHHHH-HhcCCCc-cc
Q 025065 169 VVYAHIRALEVP--KAS-GRYLL-AGSVAQHSDILKFLREHYPTLLRSGKL-E--EKYQPTIKVSQERA-KSLGINF-TP 239 (258)
Q Consensus 169 ~a~~~~~~~~~~--~~~-~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~-~--~~~~~~~~~d~~k~-~~lg~~p-~~ 239 (258)
+|++++.+++.. ... ++|++ +++.+|+.|+++.+.+.+|... +... + ........+|++|+ +.+||+| ++
T Consensus 239 ~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~ 317 (338)
T PRK10675 239 LADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPV-NYHFAPRREGDLPAYWADASKADRELNWRVTRT 317 (338)
T ss_pred HHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCC-CeeeCCCCCCchhhhhcCHHHHHHHhCCCCcCc
Confidence 999999998752 223 47855 5788999999999999997532 2111 1 22234556899999 7899999 99
Q ss_pred hhHHHHHHHHHHHHc
Q 025065 240 WEVGVRGCIESLMEK 254 (258)
Q Consensus 240 ~~~~l~~~~~~~~~~ 254 (258)
++++++++++|++++
T Consensus 318 ~~~~~~~~~~~~~~~ 332 (338)
T PRK10675 318 LDEMAQDTWHWQSRH 332 (338)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999874
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=221.45 Aligned_cols=218 Identities=16% Similarity=0.160 Sum_probs=161.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~ 86 (258)
|+||||||+||||++|+++|.++| +|++++|... .+.+|++|.+.+.++++ ++|+||||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~ 61 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDFSNPEGVAETVRKIRPDVIVNA 61 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCCCCHHHHHHHHHhcCCCEEEEC
Confidence 479999999999999999999999 7988887531 23589999999999887 58999999
Q ss_pred CCCCCC--CCCCch--------------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 87 ASPVIF--LSDNPQ--------------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 87 a~~~~~--~~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
|+.... +..++. +.|+.+|+++|+++..
T Consensus 62 Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~ 141 (299)
T PRK09987 62 AAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQE 141 (299)
T ss_pred CccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 998643 222322 6799999999999766
Q ss_pred HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC-----CCcceeeHHHHHHHHHHhhcCCCCCceE-
Q 025065 115 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-----FPYIFVEIRDVVYAHIRALEVPKASGRY- 186 (258)
Q Consensus 115 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~-----~~~~~i~v~D~a~~~~~~~~~~~~~~~~- 186 (258)
+ ..+++++||+++|||+.. .....++..+..++ .+++ +.+.+.+++|+++++..++..+...|+|
T Consensus 142 ~----~~~~~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giyn 214 (299)
T PRK09987 142 H----CAKHLIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYH 214 (299)
T ss_pred h----CCCEEEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeEE
Confidence 5 346899999999999743 22344455544554 2332 3445667777888888887665545788
Q ss_pred EEeCCCcCHHHHHHHHHHhCCCC--CC--------CCC---CccCCCCccccCHHHH-HhcCCCccchhHHHHHHHHHHH
Q 025065 187 LLAGSVAQHSDILKFLREHYPTL--LR--------SGK---LEEKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLM 252 (258)
Q Consensus 187 ~~~~~~~t~~e~~~~i~~~~~~~--~~--------~~~---~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~~~ 252 (258)
+++++.+|+.|+++.+.+..+.. .. +.. .....+.+..+|++|+ +.|||+|++++++|+++++.+.
T Consensus 215 i~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~~~~~~l~~~~~~~~ 294 (299)
T PRK09987 215 LVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLTELF 294 (299)
T ss_pred eeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCccHHHHHHHHHHHHh
Confidence 55578999999999997754321 11 100 0123456778999999 6699999999999999998663
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=220.13 Aligned_cols=233 Identities=20% Similarity=0.194 Sum_probs=170.1
Q ss_pred EEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----CCcEEEe
Q 025065 11 VCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----GCDGVFH 85 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~Vih 85 (258)
||||||+||||++++++|.++|+ +|++++|...... +..+ ....+.+|+++.+.++.+.+ ++|+|||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~---~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh 72 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK---FLNL-----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFH 72 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh---hhhh-----hheeeeccCcchhHHHHHHhhccCCCCEEEE
Confidence 68999999999999999999997 7888877543221 1111 11356788888877777654 7999999
Q ss_pred cCCCCCCCCCCch--------------------------------------------------hhHHHHHHHHHHHHHHH
Q 025065 86 TASPVIFLSDNPQ--------------------------------------------------EWYSLAKTLAEEAAWKF 115 (258)
Q Consensus 86 ~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~~~ 115 (258)
+|+.......++. +.|+.+|..+|.+++.+
T Consensus 73 ~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~ 152 (314)
T TIGR02197 73 QGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRR 152 (314)
T ss_pred CccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHH
Confidence 9997543322222 46999999999999876
Q ss_pred HHH--cCCcEEEEcCCccccCCcCCCC---CccHHHHHHHHcCC--CCC------C---CCcceeeHHHHHHHHHHhhcC
Q 025065 116 AKE--NGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGD--QSF------A---FPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 116 ~~~--~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~g~--~~~------~---~~~~~i~v~D~a~~~~~~~~~ 179 (258)
... .+++++++||+++|||+..... .....++..+..+. .++ + +.++|+|++|+++++..++..
T Consensus 153 ~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~ 232 (314)
T TIGR02197 153 VLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN 232 (314)
T ss_pred hHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc
Confidence 432 3679999999999999865321 12234455555555 221 1 568999999999999999988
Q ss_pred CCCCceEE-EeCCCcCHHHHHHHHHHhCCCCC------CCCCCccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHH
Q 025065 180 PKASGRYL-LAGSVAQHSDILKFLREHYPTLL------RSGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIES 250 (258)
Q Consensus 180 ~~~~~~~~-~~~~~~t~~e~~~~i~~~~~~~~------~~~~~~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~ 250 (258)
...++|+ ++++++|+.|+++.+.+.+|... .|............+|++|+ +.+||+| ++++++++++++|
T Consensus 233 -~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~ 311 (314)
T TIGR02197 233 -GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQW 311 (314)
T ss_pred -ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCcccHHHHHHHHHHH
Confidence 4566885 45789999999999999987432 11110011223456899999 7799999 9999999999999
Q ss_pred HH
Q 025065 251 LM 252 (258)
Q Consensus 251 ~~ 252 (258)
++
T Consensus 312 ~~ 313 (314)
T TIGR02197 312 LL 313 (314)
T ss_pred Hh
Confidence 85
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=221.66 Aligned_cols=222 Identities=17% Similarity=0.167 Sum_probs=166.0
Q ss_pred EEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEecCCC
Q 025065 12 CVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHTASP 89 (258)
Q Consensus 12 lItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~a~~ 89 (258)
|||||+||||++|+++|+++|++|+++.+. ..+|+++.+++.++++ ++|+|||||+.
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~ 59 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKEKPTYVILAAAK 59 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhccCCCEEEEeeee
Confidence 699999999999999999999988765422 1378999888888876 47999999987
Q ss_pred CCC---CCCCch-------------------------------------------------------h-hHHHHHHHHHH
Q 025065 90 VIF---LSDNPQ-------------------------------------------------------E-WYSLAKTLAEE 110 (258)
Q Consensus 90 ~~~---~~~~~~-------------------------------------------------------~-~Y~~sK~~~e~ 110 (258)
.+. ...++. + .|+.+|.++|+
T Consensus 60 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~ 139 (306)
T PLN02725 60 VGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIK 139 (306)
T ss_pred ecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHH
Confidence 432 111111 1 39999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCcCCC---CCccHHHHHH----HHcCC-CC--CC---CCcceeeHHHHHHHHHHhh
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFFQPI---LNFGAEVILN----LINGD-QS--FA---FPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~----~~~g~-~~--~~---~~~~~i~v~D~a~~~~~~~ 177 (258)
+++.+.++++++++++||+.+|||+.... ......++.. ...+. .. ++ +.++|+|++|++++++.++
T Consensus 140 ~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~ 219 (306)
T PLN02725 140 MCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLM 219 (306)
T ss_pred HHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHH
Confidence 99999888899999999999999975321 1122333332 23344 22 23 6789999999999999999
Q ss_pred cCCCCCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCC-c-cCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHH
Q 025065 178 EVPKASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKL-E-EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 178 ~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~-~-~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
++....+.|++ +++.+|+.|+++.+++.++........ . ........+|++|++.+||+| ++++++++++++|+++
T Consensus 220 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 299 (306)
T PLN02725 220 RRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLE 299 (306)
T ss_pred hccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCcccccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 87655566744 578999999999999998642211111 1 222345678999997799999 8999999999999987
Q ss_pred c
Q 025065 254 K 254 (258)
Q Consensus 254 ~ 254 (258)
+
T Consensus 300 ~ 300 (306)
T PLN02725 300 N 300 (306)
T ss_pred h
Confidence 5
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-32 Score=224.19 Aligned_cols=230 Identities=13% Similarity=0.143 Sum_probs=170.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
++|+||||||+||||++|+++|+++| ++|++++|+...... ...... ..++.++.+|++|++.+.++++++|+||
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~-~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~~iD~Vi 79 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE-MQQKFP--APCLRFFIGDVRDKERLTRALRGVDYVV 79 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH-HHHHhC--CCcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence 46899999999999999999999986 789999886543211 011111 1468899999999999999999999999
Q ss_pred ecCCCCCC--CCCCch-------------------------------------hhHHHHHHHHHHHHHHHH---HHcCCc
Q 025065 85 HTASPVIF--LSDNPQ-------------------------------------EWYSLAKTLAEEAAWKFA---KENGID 122 (258)
Q Consensus 85 h~a~~~~~--~~~~~~-------------------------------------~~Y~~sK~~~e~~~~~~~---~~~~~~ 122 (258)
|+||.... ...++. ++|+.+|.++|.+++.+. .++|++
T Consensus 80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~ 159 (324)
T TIGR03589 80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANPINLYGATKLASDKLFVAANNISGSKGTR 159 (324)
T ss_pred ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHhhccccCcE
Confidence 99997532 122221 679999999999987754 356899
Q ss_pred EEEEcCCccccCCcCCCCCccHHHHHHHHcCC---CCCC--CCcceeeHHHHHHHHHHhhcCCCCCceEEEeCCCcCHHH
Q 025065 123 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA--FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSD 197 (258)
Q Consensus 123 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~---~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~t~~e 197 (258)
++++||++||||... ..+.+......+. ++.+ +.++|+|++|++++++.++++.....+|++++..+++.|
T Consensus 160 ~~~lR~g~v~G~~~~----~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~~~~~~~~~~~~sv~e 235 (324)
T TIGR03589 160 FSVVRYGNVVGSRGS----VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLGGEIFVPKIPSMKITD 235 (324)
T ss_pred EEEEeecceeCCCCC----cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCCCCEEccCCCcEEHHH
Confidence 999999999998632 2333444444453 2222 678999999999999999987533347777778899999
Q ss_pred HHHHHHHhCCCCCCCCCCccCC-CCccccCHHHH-HhcCCCc-cchhHHHH
Q 025065 198 ILKFLREHYPTLLRSGKLEEKY-QPTIKVSQERA-KSLGINF-TPWEVGVR 245 (258)
Q Consensus 198 ~~~~i~~~~~~~~~~~~~~~~~-~~~~~~d~~k~-~~lg~~p-~~~~~~l~ 245 (258)
+++.+.+..+....+.. +.. .....+|.+++ +.|||+| ++++++++
T Consensus 236 l~~~i~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~ 284 (324)
T TIGR03589 236 LAEAMAPECPHKIVGIR--PGEKLHEVMITEDDARHTYELGDYYAILPSIS 284 (324)
T ss_pred HHHHHHhhCCeeEeCCC--CCchhHhhhcChhhhhhhcCCCCeEEEccccc
Confidence 99999997643222221 112 23356899999 8899999 99999986
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-31 Score=218.30 Aligned_cols=237 Identities=24% Similarity=0.303 Sum_probs=187.0
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCC-cEEEecCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC-DGVFHTAS 88 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-d~Vih~a~ 88 (258)
+|||||||||||++|+++|+++||+|++++|......... .++.++.+|+++.+...+.+.++ |+|||+|+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa 73 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAA 73 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence 4999999999999999999999999999999776543211 35789999999998888888888 99999999
Q ss_pred CCCCCCC---Cch---------------------------------------------h--------hHHHHHHHHHHHH
Q 025065 89 PVIFLSD---NPQ---------------------------------------------E--------WYSLAKTLAEEAA 112 (258)
Q Consensus 89 ~~~~~~~---~~~---------------------------------------------~--------~Y~~sK~~~e~~~ 112 (258)
....... ++. + +|+.+|+++|..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~ 153 (314)
T COG0451 74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLL 153 (314)
T ss_pred cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Confidence 8754222 111 1 3999999999999
Q ss_pred HHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCCC--CCC----CCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 113 WKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQ--SFA----FPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 113 ~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~~--~~~----~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
..+..+++++++++||+++|||++..... ....++.....+.+ .+. ..++++|++|++++++.+++++...
T Consensus 154 ~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~- 232 (314)
T COG0451 154 RAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG- 232 (314)
T ss_pred HHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc-
Confidence 99988889999999999999998876522 12233444455553 221 5578999999999999999998766
Q ss_pred eEEEe-CC-CcCHHHHHHHHHHhCCCCCCC---CC--CccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHcC
Q 025065 185 RYLLA-GS-VAQHSDILKFLREHYPTLLRS---GK--LEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKG 255 (258)
Q Consensus 185 ~~~~~-~~-~~t~~e~~~~i~~~~~~~~~~---~~--~~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~~ 255 (258)
.|+++ +. ..+++|+++.+.+.+|..... .. ..........+|++++ +.|||+| +++++++.++++|+....
T Consensus 233 ~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 233 VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 88666 54 799999999999999765321 11 1244556778999999 7899999 899999999999998754
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-31 Score=223.49 Aligned_cols=228 Identities=28% Similarity=0.439 Sum_probs=171.7
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC------cCCcEEEEEccCCCcccHHHHhC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG------ATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
.+++|+||||||+||||++|+++|+++|++|+++.|+.... ..+..+.. ...++.++.+|++|.+.+.++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~--~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDK--EKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 35788999999999999999999999999999988865332 11111100 01357889999999999999999
Q ss_pred CCcEEEecCCCCCCCC----CCch--------------------------------------------------------
Q 025065 79 GCDGVFHTASPVIFLS----DNPQ-------------------------------------------------------- 98 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~----~~~~-------------------------------------------------------- 98 (258)
++|+|||+|+...... ....
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 9999999998642210 0000
Q ss_pred ------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHH
Q 025065 99 ------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVV 170 (258)
Q Consensus 99 ------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a 170 (258)
++|+.+|.++|.+++.+++++|++++++||++||||+...... ..+...+.|. .+++ ..++|+||+|+|
T Consensus 208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~---~~~~~~~~g~~~~~g~g~~~~v~V~Dva 284 (367)
T PLN02686 208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS---TATIAYLKGAQEMLADGLLATADVERLA 284 (367)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC---hhHHHHhcCCCccCCCCCcCeEEHHHHH
Confidence 1489999999999999988889999999999999997543211 1233455565 5555 566899999999
Q ss_pred HHHHHhhcCC---CCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCC--c-cCCCCccccCHHHH-HhcCCCc
Q 025065 171 YAHIRALEVP---KASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKL--E-EKYQPTIKVSQERA-KSLGINF 237 (258)
Q Consensus 171 ~~~~~~~~~~---~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~--~-~~~~~~~~~d~~k~-~~lg~~p 237 (258)
++++.+++.. ...++|+++++.+++.|+++.+.+.+|........ . +.....+..|++|+ +.|||+|
T Consensus 285 ~A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~~~ 358 (367)
T PLN02686 285 EAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGLPINKIAGNSSSDDTPARFELSNKKLSRLMSRTR 358 (367)
T ss_pred HHHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCCCCCcCCCchhhcCCcccccccHHHHHHHHHHhh
Confidence 9999999853 23457888899999999999999999743111111 1 34566788999999 8899998
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=212.98 Aligned_cols=223 Identities=32% Similarity=0.532 Sum_probs=168.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.+++||||||+||||++++++|+++||+|++++|+...... ..+..+.....++.++.+|++|.+.+.+++.++|.|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 46789999999999999999999999999999986433211 11222211124688999999999999999999999999
Q ss_pred cCCCCCCCCCCch-------------------------------------h--------------------------hHH
Q 025065 86 TASPVIFLSDNPQ-------------------------------------E--------------------------WYS 102 (258)
Q Consensus 86 ~a~~~~~~~~~~~-------------------------------------~--------------------------~Y~ 102 (258)
+++.......... . +|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~ 164 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA 164 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence 7754322111110 0 599
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcCC
Q 025065 103 LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+|..+|++++.++++.+++++++||++||||...... ..+.+. ..++ ..++|+||+|+|++++.+++.+
T Consensus 165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~ 236 (297)
T PLN02583 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--------PYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDV 236 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--------hhhcCCcccCcccCcceEEHHHHHHHHHHHhcCc
Confidence 99999999999998888999999999999999764321 123333 3333 5678999999999999999988
Q ss_pred CCCceEEEeCCCcC-HHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHHHhcCCCc
Q 025065 181 KASGRYLLAGSVAQ-HSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINF 237 (258)
Q Consensus 181 ~~~~~~~~~~~~~t-~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~p 237 (258)
...+.|+++++..+ ..++++.+.+.+|..+.|.... ........++++|+++||++.
T Consensus 237 ~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~~~ 296 (297)
T PLN02583 237 SSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEMQGSEVYQQRIRNKKLNKLMEDF 296 (297)
T ss_pred ccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCcccccCCCccccccChHHHHHhCccc
Confidence 77778988876555 6789999999998877665321 133456779999998899874
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=210.21 Aligned_cols=213 Identities=17% Similarity=0.164 Sum_probs=158.7
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEEecC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFHTA 87 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih~a 87 (258)
||||||||||||++|+++|+++|++|++++|+ .+|+.+.+.+.+++++ +|+|||+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~~~d~vi~~a 58 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDLTDPEALERLLRAIRPDAVVNTA 58 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence 58999999999999999999999999999874 2577777777777765 48888887
Q ss_pred CCCCCCC--CCc--------------------------------------------------hhhHHHHHHHHHHHHHHH
Q 025065 88 SPVIFLS--DNP--------------------------------------------------QEWYSLAKTLAEEAAWKF 115 (258)
Q Consensus 88 ~~~~~~~--~~~--------------------------------------------------~~~Y~~sK~~~e~~~~~~ 115 (258)
+...... ..+ .+.|+.+|..+|+.++.+
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~ 138 (287)
T TIGR01214 59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA 138 (287)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence 7532210 000 157999999999997654
Q ss_pred HHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC-CCcceeeHHHHHHHHHHhhcCC-CCCceE-EEeC
Q 025065 116 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVP-KASGRY-LLAG 190 (258)
Q Consensus 116 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~-~~~~~i~v~D~a~~~~~~~~~~-~~~~~~-~~~~ 190 (258)
+.+++++||+.+||+.... .....++..+..+. ...+ ..++++|++|+|+++..+++.+ ...++| ++++
T Consensus 139 ----~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~ 212 (287)
T TIGR01214 139 ----GPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANS 212 (287)
T ss_pred ----CCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECC
Confidence 7899999999999998432 22233444444444 2233 6789999999999999999886 356678 5567
Q ss_pred CCcCHHHHHHHHHHhCCCCCCCCCC-----------c--cCCCCccccCHHHH-HhcCCCccchhHHHHHHHHH
Q 025065 191 SVAQHSDILKFLREHYPTLLRSGKL-----------E--EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIES 250 (258)
Q Consensus 191 ~~~t~~e~~~~i~~~~~~~~~~~~~-----------~--~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~ 250 (258)
+.+|+.|+++.+.+.+|....+... . ........+|++|+ +.|||++++++++|+++++.
T Consensus 213 ~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~~~~~~~l~~~~~~ 286 (287)
T TIGR01214 213 GQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPLPHWREALRAYLQE 286 (287)
T ss_pred CCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCCccHHHHHHHHHhh
Confidence 8999999999999999754321100 0 12234567999999 77999669999999988763
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=231.81 Aligned_cols=223 Identities=18% Similarity=0.112 Sum_probs=162.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|+|+||||+||||++++++|+++|++|++++|+..... ..++.++.+|+++.+.+.++++++|+|||+|+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~----------~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa 70 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW----------PSSADFIAADIRDATAVESAMTGADVVAHCAW 70 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc----------ccCceEEEeeCCCHHHHHHHHhCCCEEEECCC
Confidence 47999999999999999999999999999998743210 13578899999999999999999999999998
Q ss_pred CCCCCCC-Cch--------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHH
Q 025065 89 PVIFLSD-NPQ--------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVI 147 (258)
Q Consensus 89 ~~~~~~~-~~~--------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~ 147 (258)
....... +.. +..+ |.++|+++ .+++++++++||+++|||+.. .++
T Consensus 71 ~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--K~aaE~ll----~~~gl~~vILRp~~VYGP~~~-------~~i 137 (854)
T PRK05865 71 VRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH--QPRVEQML----ADCGLEWVAVRCALIFGRNVD-------NWV 137 (854)
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--HHHHHHHH----HHcCCCEEEEEeceEeCCChH-------HHH
Confidence 6432100 000 2222 88888775 356999999999999999622 123
Q ss_pred HHHHcCC-CCCC---CCcceeeHHHHHHHHHHhhcCCC-CCceE-EEeCCCcCHHHHHHHHHHhCCCCCCCCC--Cc---
Q 025065 148 LNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPK-ASGRY-LLAGSVAQHSDILKFLREHYPTLLRSGK--LE--- 216 (258)
Q Consensus 148 ~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~-~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~--~~--- 216 (258)
..+.... ...+ ..++|+|++|+|+++..+++++. ..++| +++++.+|++|+++.+.+.....+.+.. ..
T Consensus 138 ~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~ 217 (854)
T PRK05865 138 QRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFA 217 (854)
T ss_pred HHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchh
Confidence 3322211 1112 45799999999999999987554 35678 5568899999999999875421111110 00
Q ss_pred --cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 217 --EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 217 --~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
........+|++|+ +.|||+| ++++++|+++++|++.+
T Consensus 218 ~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 218 ELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred hhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 11122446899999 7799999 99999999999999874
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=211.75 Aligned_cols=243 Identities=18% Similarity=0.204 Sum_probs=172.5
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEecC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHTA 87 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~a 87 (258)
|||||||+|+||++++++|+++|++|++++|...... ........ ..+++++.+|+++++++.++++ ++|+|||+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a 78 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSP-EALKRGER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA 78 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccch-hhhhhhcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence 5899999999999999999999999998876433221 11111111 1257788999999999999886 699999999
Q ss_pred CCCCCCC--CCch---------------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 88 SPVIFLS--DNPQ---------------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 88 ~~~~~~~--~~~~---------------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
+...... .++. +.|+.+|..+|.+++.
T Consensus 79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~ 158 (328)
T TIGR01179 79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRD 158 (328)
T ss_pred cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHH
Confidence 8642210 0000 4599999999999999
Q ss_pred HHHH-cCCcEEEEcCCccccCCcCCCC-------CccHHHHHHHHcCC----C------CCC---CCcceeeHHHHHHHH
Q 025065 115 FAKE-NGIDLVAIHPGTVIGPFFQPIL-------NFGAEVILNLINGD----Q------SFA---FPYIFVEIRDVVYAH 173 (258)
Q Consensus 115 ~~~~-~~~~~~ilRp~~v~G~~~~~~~-------~~~~~~~~~~~~g~----~------~~~---~~~~~i~v~D~a~~~ 173 (258)
++++ .+++++++||+.+||+...... ......+.....+. . ..+ ..++|+|++|+++++
T Consensus 159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~ 238 (328)
T TIGR01179 159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH 238 (328)
T ss_pred HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence 8877 7999999999999998643210 11111122222211 1 111 557999999999999
Q ss_pred HHhhcCC---CCCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHH-HhcCCCc-cc-hhHHH
Q 025065 174 IRALEVP---KASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERA-KSLGINF-TP-WEVGV 244 (258)
Q Consensus 174 ~~~~~~~---~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~-~~~~l 244 (258)
..++.+. ...++|++ +++++|++|+++.+.+.+|......... .........|++++ +.|||+| ++ +++++
T Consensus 239 ~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~l~~~~ 318 (328)
T TIGR01179 239 LAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRPGDPASLVADASKIRRELGWQPKYTDLEIII 318 (328)
T ss_pred HHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCCccccchhcchHHHHHHhCCCCCcchHHHHH
Confidence 9998753 23458855 5789999999999999997532111111 11223456799999 7799999 76 99999
Q ss_pred HHHHHHHHHc
Q 025065 245 RGCIESLMEK 254 (258)
Q Consensus 245 ~~~~~~~~~~ 254 (258)
+++++|+.+|
T Consensus 319 ~~~~~~~~~~ 328 (328)
T TIGR01179 319 KTAWRWESRN 328 (328)
T ss_pred HHHHHHHhcC
Confidence 9999999764
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=204.27 Aligned_cols=248 Identities=19% Similarity=0.216 Sum_probs=188.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V 83 (258)
.++||||||+||||+|.+-+|+++||.|.+++.-...... ...+++.....++.++++|++|.+.++++|+ .+|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 4789999999999999999999999999998854333211 3334444445789999999999999999997 48999
Q ss_pred EecCCCCCC--CCCCch----------------------------------------------------hhHHHHHHHHH
Q 025065 84 FHTASPVIF--LSDNPQ----------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 84 ih~a~~~~~--~~~~~~----------------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|+.... +..+|. ++|+.+|...|
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE 161 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE 161 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence 999998543 334444 78999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCcccc--CCcCCCCC------ccHHHHHHHHcCC-C---CC--------C-CCcceeeHHH
Q 025065 110 EAAWKFAKENGIDLVAIHPGTVIG--PFFQPILN------FGAEVILNLINGD-Q---SF--------A-FPYIFVEIRD 168 (258)
Q Consensus 110 ~~~~~~~~~~~~~~~ilRp~~v~G--~~~~~~~~------~~~~~~~~~~~g~-~---~~--------~-~~~~~i~v~D 168 (258)
+++..+....++.++.||.++++| |....... .....+.+..-|. + .+ + ..++++|+.|
T Consensus 162 ~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~D 241 (343)
T KOG1371|consen 162 EIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLD 241 (343)
T ss_pred HHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceeeEe
Confidence 999999988899999999999999 43221110 0111122222222 1 11 1 7899999999
Q ss_pred HHHHHHHhhcCCCC---CceE-EEeCCCcCHHHHHHHHHHhCCCC-CCCCCC-ccCCCCccccCHHHH-HhcCCCc-cch
Q 025065 169 VVYAHIRALEVPKA---SGRY-LLAGSVAQHSDILKFLREHYPTL-LRSGKL-EEKYQPTIKVSQERA-KSLGINF-TPW 240 (258)
Q Consensus 169 ~a~~~~~~~~~~~~---~~~~-~~~~~~~t~~e~~~~i~~~~~~~-~~~~~~-~~~~~~~~~~d~~k~-~~lg~~p-~~~ 240 (258)
+|+..+.++..... .++| ++++...++.+++..++++.|.. +.+... ..........+.+++ ++|||+| +++
T Consensus 242 la~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~~~~a~~elgwk~~~~i 321 (343)
T KOG1371|consen 242 LADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPRRNGDVAFVYANPSKAQRELGWKAKYGL 321 (343)
T ss_pred hHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCCCCCCceeeeeChHHHHHHhCCccccCH
Confidence 99999999987654 3378 56688999999999999999753 222221 144556777889999 9999999 999
Q ss_pred hHHHHHHHHHHHHcC
Q 025065 241 EVGVRGCIESLMEKG 255 (258)
Q Consensus 241 ~~~l~~~~~~~~~~~ 255 (258)
++++++.++|...+.
T Consensus 322 ee~c~dlw~W~~~np 336 (343)
T KOG1371|consen 322 QEMLKDLWRWQKQNP 336 (343)
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999998763
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=219.80 Aligned_cols=240 Identities=16% Similarity=0.154 Sum_probs=169.9
Q ss_pred CCcEEEEE----CCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc---h---hhccccCcCCcEEEEEccCCCcccHHHH
Q 025065 7 EEKVVCVT----GASGFVASWLVKLLLQRGYTVKATVRDPNSPKT---E---HLRELDGATERLHLFKANLLEEGSFDSA 76 (258)
Q Consensus 7 ~~~~ilIt----Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (258)
++++|||| |||||||++|+++|+++||+|++++|+...... . .+..+. ..+++++++|+.+ +.++
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKSK 125 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHhh
Confidence 35789999 999999999999999999999999998654211 0 001111 1358899999987 4444
Q ss_pred h--CCCcEEEecCCCCCC--------CC-CCc-h-------hhHH----------------HHHHHHHHHHHHHHHHcCC
Q 025065 77 V--DGCDGVFHTASPVIF--------LS-DNP-Q-------EWYS----------------LAKTLAEEAAWKFAKENGI 121 (258)
Q Consensus 77 ~--~~~d~Vih~a~~~~~--------~~-~~~-~-------~~Y~----------------~sK~~~e~~~~~~~~~~~~ 121 (258)
+ .++|+|||+++.... .. ... . ..|+ .+|..+|.++ ++.++
T Consensus 126 ~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l----~~~~l 201 (378)
T PLN00016 126 VAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYL----QKLGV 201 (378)
T ss_pred hccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHH----HHcCC
Confidence 4 469999999763100 00 000 0 1221 1788998875 35689
Q ss_pred cEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC----CCcceeeHHHHHHHHHHhhcCCCC-CceEEE-eCCCcC
Q 025065 122 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA----FPYIFVEIRDVVYAHIRALEVPKA-SGRYLL-AGSVAQ 194 (258)
Q Consensus 122 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~----~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~-~~~~~t 194 (258)
+++++||+.+||+..... ....++.++..+. ..++ +.++|+|++|+|+++..+++++.. +++|++ +++.+|
T Consensus 202 ~~~ilRp~~vyG~~~~~~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s 279 (378)
T PLN00016 202 NWTSFRPQYIYGPGNNKD--CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVT 279 (378)
T ss_pred CeEEEeceeEECCCCCCc--hHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccC
Confidence 999999999999975432 2233455666666 2222 678999999999999999998654 347855 467899
Q ss_pred HHHHHHHHHHhCCCCC-CCCCCc-----------cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHcCCC
Q 025065 195 HSDILKFLREHYPTLL-RSGKLE-----------EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKGFL 257 (258)
Q Consensus 195 ~~e~~~~i~~~~~~~~-~~~~~~-----------~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~~~~ 257 (258)
+.|+++.+.+.+|... +..... +........|++|+ +.|||+| ++++++|+++++|++.+|.+
T Consensus 280 ~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~ 356 (378)
T PLN00016 280 FDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRD 356 (378)
T ss_pred HHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999987532 100000 11123345799999 7799999 89999999999999988764
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=193.05 Aligned_cols=226 Identities=20% Similarity=0.183 Sum_probs=175.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCE--EEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYT--VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V 83 (258)
++||||||++|.+|++|.+.+.++|.+ --++. . .-.+|+++.++.+++|. ++..|
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~-~--------------------skd~DLt~~a~t~~lF~~ekPthV 59 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI-G--------------------SKDADLTNLADTRALFESEKPTHV 59 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe-c--------------------cccccccchHHHHHHHhccCCcee
Confidence 478999999999999999999998752 11111 1 11379999999999996 48999
Q ss_pred EecCCCCCCCCCCch-----------------------------------------------------------hhHHHH
Q 025065 84 FHTASPVIFLSDNPQ-----------------------------------------------------------EWYSLA 104 (258)
Q Consensus 84 ih~a~~~~~~~~~~~-----------------------------------------------------------~~Y~~s 104 (258)
||+|++++.-..+.. -.|+.+
T Consensus 60 IhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyA 139 (315)
T KOG1431|consen 60 IHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYA 139 (315)
T ss_pred eehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHH
Confidence 999999765322221 579999
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC---ccHHHHHHH----HcCC---CCCC---CCcceeeHHHHHH
Q 025065 105 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN---FGAEVILNL----INGD---QSFA---FPYIFVEIRDVVY 171 (258)
Q Consensus 105 K~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~----~~g~---~~~~---~~~~~i~v~D~a~ 171 (258)
|+++.-..+.|..++|..++.+-|.++|||.++.+.. -.+.++.++ .+|. .+|+ +.|+|+|++|+|+
T Consensus 140 Kr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~ 219 (315)
T KOG1431|consen 140 KRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLAD 219 (315)
T ss_pred HHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHH
Confidence 9998888899999999999999999999998876532 235555553 2333 4555 7899999999999
Q ss_pred HHHHhhcCCCCCc-eEEEeCC--CcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHHHhcCCCc--cchhHHH
Q 025065 172 AHIRALEVPKASG-RYLLAGS--VAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINF--TPWEVGV 244 (258)
Q Consensus 172 ~~~~~~~~~~~~~-~~~~~~~--~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~p--~~~~~~l 244 (258)
++++++++-+.-. +.+..++ .+|++|+++.+.++++-...-.+.. +........|++|++.|+|.| ++++++|
T Consensus 220 l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq~kKtasnsKL~sl~pd~~ft~l~~ai 299 (315)
T KOG1431|consen 220 LFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQFKKTASNSKLRSLLPDFKFTPLEQAI 299 (315)
T ss_pred HHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCCcccccchHHHHHhCCCcccChHHHHH
Confidence 9999999876555 4455565 9999999999999986443222222 445667789999999999988 7799999
Q ss_pred HHHHHHHHHc
Q 025065 245 RGCIESLMEK 254 (258)
Q Consensus 245 ~~~~~~~~~~ 254 (258)
+++++||.++
T Consensus 300 ~~t~~Wy~~N 309 (315)
T KOG1431|consen 300 SETVQWYLDN 309 (315)
T ss_pred HHHHHHHHHh
Confidence 9999999875
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=210.52 Aligned_cols=227 Identities=15% Similarity=0.172 Sum_probs=164.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|+|+|||||||||++|+++|+++||+|++++|+.++.. .+. ..+++++.+|++|++++.++++++|+|||+++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~--~l~-----~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS--FLK-----EWGAELVYGDLSLPETLPPSFKGVTAIIDAST 73 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh--hHh-----hcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence 47999999999999999999999999999999864321 111 13689999999999999999999999999986
Q ss_pred CCCCCCCC-----ch------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 89 PVIFLSDN-----PQ------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 89 ~~~~~~~~-----~~------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
........ .. ++|..+|.++|+.+ ++++++++++||+.+|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~~~~~~~K~~~e~~l----~~~~l~~tilRp~~~~~ 149 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPYIPLMKLKSDIEQKL----KKSGIPYTIFRLAGFFQ 149 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCCChHHHHHHHHHHHH----HHcCCCeEEEeecHHhh
Confidence 43211110 00 45788899988875 45699999999999886
Q ss_pred CCcCCCCCccHHHHHHHHcCCCC--CC--CCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEeCCCcCHHHHHHHHHHhCC
Q 025065 134 PFFQPILNFGAEVILNLINGDQS--FA--FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLAGSVAQHSDILKFLREHYP 207 (258)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~~~~~t~~e~~~~i~~~~~ 207 (258)
..... .....+.+.+. .+ +.++|+|++|+|+++..+++++...| +| +++++.+|+.|+++.+.+.+|
T Consensus 150 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g 222 (317)
T CHL00194 150 GLISQ-------YAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSG 222 (317)
T ss_pred hhhhh-------hhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHhC
Confidence 42111 11122223321 11 67899999999999999998765444 88 555789999999999999987
Q ss_pred CC----CCCCCCc-------------------------cCCCCccccCHHHH-HhcCCCc---cchhHHHHHHHHHHHH
Q 025065 208 TL----LRSGKLE-------------------------EKYQPTIKVSQERA-KSLGINF---TPWEVGVRGCIESLME 253 (258)
Q Consensus 208 ~~----~~~~~~~-------------------------~~~~~~~~~d~~k~-~~lg~~p---~~~~~~l~~~~~~~~~ 253 (258)
.. .+|.+.. ........++.+++ +.||+.| +++++++++++....+
T Consensus 223 ~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 301 (317)
T CHL00194 223 QKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERILK 301 (317)
T ss_pred CCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHHH
Confidence 52 1221111 11223444677788 7799997 6899999988876654
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=205.55 Aligned_cols=191 Identities=28% Similarity=0.424 Sum_probs=146.5
Q ss_pred EEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCCC
Q 025065 12 CVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASP 89 (258)
Q Consensus 12 lItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~~ 89 (258)
|||||+||||++|+++|+++| ++|+++++.+.......+... ...+++++|++|++++.++++++|+|||+|+.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~----~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~ 76 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS----GVKEYIQGDITDPESLEEALEGVDVVFHTAAP 76 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc----cceeEEEeccccHHHHHHHhcCCceEEEeCcc
Confidence 699999999999999999999 799999987765432222221 23349999999999999999999999999998
Q ss_pred CCCCCCC-ch---------------------------------------------------------hhHHHHHHHHHHH
Q 025065 90 VIFLSDN-PQ---------------------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 90 ~~~~~~~-~~---------------------------------------------------------~~Y~~sK~~~e~~ 111 (258)
.+..... .. +.|+.||.++|++
T Consensus 77 ~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~ 156 (280)
T PF01073_consen 77 VPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKA 156 (280)
T ss_pred ccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHH
Confidence 6553321 11 6899999999999
Q ss_pred HHHHHH---H--cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcC--
Q 025065 112 AWKFAK---E--NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEV-- 179 (258)
Q Consensus 112 ~~~~~~---~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~-- 179 (258)
+.++.. + ..+.+++|||+.||||++....+. +......|. ..++ ...+++|++|+|.+++.++++
T Consensus 157 V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~---~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~ 233 (280)
T PF01073_consen 157 VLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPR---LVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALL 233 (280)
T ss_pred HHhhcccccccccceeEEEEeccEEeCcccccccch---hhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhc
Confidence 988765 2 249999999999999997754332 233333443 2233 578999999999999988652
Q ss_pred -----CCCCc-eE-EEeCCCcC-HHHHHHHHHHhCCCC
Q 025065 180 -----PKASG-RY-LLAGSVAQ-HSDILKFLREHYPTL 209 (258)
Q Consensus 180 -----~~~~~-~~-~~~~~~~t-~~e~~~~i~~~~~~~ 209 (258)
....| .| +.++++++ +.|+.+.+.+.+|..
T Consensus 234 ~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~ 271 (280)
T PF01073_consen 234 EPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYP 271 (280)
T ss_pred cccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCC
Confidence 22345 67 55688888 999999999999854
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=208.00 Aligned_cols=214 Identities=21% Similarity=0.253 Sum_probs=149.2
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~ 86 (258)
||||||||+|+||++|.++|.++|++|+++.|. ..|++|.+.+.+.+. ++|+||||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~~pd~Vin~ 58 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDLTDPEAVAKLLEAFKPDVVINC 58 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-TTSHHHHHHHHHHH--SEEEE-
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCCCCHHHHHHHHHHhCCCeEecc
Confidence 689999999999999999999999999998765 278999988988886 48999999
Q ss_pred CCCCCC--CCCCch--------------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 87 ASPVIF--LSDNPQ--------------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 87 a~~~~~--~~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
||.... ++.++. +.||.+|+++|+.++.
T Consensus 59 aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~ 138 (286)
T PF04321_consen 59 AAYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRA 138 (286)
T ss_dssp -----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHH
T ss_pred ceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 998543 333433 7899999999999766
Q ss_pred HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC-CCcceeeHHHHHHHHHHhhcCCCC----CceE-
Q 025065 115 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKA----SGRY- 186 (258)
Q Consensus 115 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~----~~~~- 186 (258)
. .-+++|+|++++||+... .....++..+..++ ..+. ..++++|++|+|+++..++++... .|+|
T Consensus 139 ~----~~~~~IlR~~~~~g~~~~---~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh 211 (286)
T PF04321_consen 139 A----CPNALILRTSWVYGPSGR---NFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYH 211 (286)
T ss_dssp H-----SSEEEEEE-SEESSSSS---SHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE
T ss_pred h----cCCEEEEecceecccCCC---chhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEE
Confidence 3 249999999999999322 23344455555665 3333 788999999999999999987643 5788
Q ss_pred EEeCCCcCHHHHHHHHHHhCCCCC-----CCCCC---ccCCCCccccCHHHH-HhcCCCccchhHHHHHHHHHH
Q 025065 187 LLAGSVAQHSDILKFLREHYPTLL-----RSGKL---EEKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESL 251 (258)
Q Consensus 187 ~~~~~~~t~~e~~~~i~~~~~~~~-----~~~~~---~~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~~ 251 (258)
+++++.+|+.|+++.+++.++... .+... ....+.+..+|++|+ +.+|+++++++++|+++++.+
T Consensus 212 ~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 212 LSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPPPWREGLEELVKQY 285 (286)
T ss_dssp ---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS---BHHHHHHHHHHHH
T ss_pred EecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCcCHHHHHHHHHHHh
Confidence 666888999999999999986433 11111 134556788999999 668999999999999999865
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=194.14 Aligned_cols=243 Identities=23% Similarity=0.286 Sum_probs=180.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
++.+++||||+||+|++|+++|++++ .+|++++..+.......... ......++++++|+++...+.++++++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~-~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT-GFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh-cccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 46799999999999999999999998 89999998776332211100 002467999999999999999999999 888
Q ss_pred ecCCCCCC--CCCCch------------------------------------------------------hhHHHHHHHH
Q 025065 85 HTASPVIF--LSDNPQ------------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 85 h~a~~~~~--~~~~~~------------------------------------------------------~~Y~~sK~~~ 108 (258)
|||+.... ...++. +.|+.||+.+
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~a 160 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALA 160 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHH
Confidence 88886432 222222 6899999999
Q ss_pred HHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCC--C---CCcceeeHHHHHHHHHHhhc-----
Q 025065 109 EEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF--A---FPYIFVEIRDVVYAHIRALE----- 178 (258)
Q Consensus 109 e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~--~---~~~~~i~v~D~a~~~~~~~~----- 178 (258)
|+++++.....++.+|++||+.||||++... .+..+.-+..|...+ + ...+++|++.++.+++.+..
T Consensus 161 E~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~---~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~ 237 (361)
T KOG1430|consen 161 EKLVLEANGSDDLYTCALRPPGIYGPGDKRL---LPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDK 237 (361)
T ss_pred HHHHHHhcCCCCeeEEEEccccccCCCCccc---cHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhc
Confidence 9999887765679999999999999998754 333445555665222 2 67899999999999887653
Q ss_pred CCCCCc-eE-EEeCCCcCHHHHHHHHHHhCCCCC-----CCCCCc--------------------------cCCCCcccc
Q 025065 179 VPKASG-RY-LLAGSVAQHSDILKFLREHYPTLL-----RSGKLE--------------------------EKYQPTIKV 225 (258)
Q Consensus 179 ~~~~~~-~~-~~~~~~~t~~e~~~~i~~~~~~~~-----~~~~~~--------------------------~~~~~~~~~ 225 (258)
.+...| .| +.++.++...++...+.+.+|... +|.+.. ........+
T Consensus 238 ~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f 317 (361)
T KOG1430|consen 238 SPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTF 317 (361)
T ss_pred CCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeecccccc
Confidence 334566 56 666888877777779999887432 111111 111135568
Q ss_pred CHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 226 SQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 226 d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+++|+ +.|||.| .++++++++++.|....
T Consensus 318 ~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~ 348 (361)
T KOG1430|consen 318 SIEKAKRELGYKPLVSLEEAIQRTIHWVASE 348 (361)
T ss_pred CHHHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence 99999 8899999 99999999999987653
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=188.29 Aligned_cols=211 Identities=18% Similarity=0.211 Sum_probs=167.7
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEecC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHTA 87 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~a 87 (258)
+|||||++|++|++|++.|. .+++|++++|.. .|++|++.+.++++ ++|+|||+|
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~~PDvVIn~A 58 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDITDPDAVLEVIRETRPDVVINAA 58 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence 49999999999999999998 679999998753 79999999999997 589999999
Q ss_pred CCCCC--CCCCch--------------------------------------------------hhHHHHHHHHHHHHHHH
Q 025065 88 SPVIF--LSDNPQ--------------------------------------------------EWYSLAKTLAEEAAWKF 115 (258)
Q Consensus 88 ~~~~~--~~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~~~ 115 (258)
+.... ++.++. +.||.||+++|..++.+
T Consensus 59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~ 138 (281)
T COG1091 59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA 138 (281)
T ss_pred cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence 99644 455544 78999999999996654
Q ss_pred HHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCC--CCC-CCcceeeHHHHHHHHHHhhcCCCCCceE-EEeCC
Q 025065 116 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ--SFA-FPYIFVEIRDVVYAHIRALEVPKASGRY-LLAGS 191 (258)
Q Consensus 116 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~--~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~-~~~~~ 191 (258)
+.+.+|+|.+++||.... .+...++.....|++ .+. +..+.+++.|+|+++..++......|+| +.+..
T Consensus 139 ----~~~~~I~Rtswv~g~~g~---nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~g 211 (281)
T COG1091 139 ----GPRHLILRTSWVYGEYGN---NFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSG 211 (281)
T ss_pred ----CCCEEEEEeeeeecCCCC---CHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEeCCC
Confidence 579999999999998642 233344455555552 233 8889999999999999999998777788 55566
Q ss_pred CcCHHHHHHHHHHhCCCCC-C--CCCCc-----cCCCCccccCHHHH-HhcCCCccchhHHHHHHHHH
Q 025065 192 VAQHSDILKFLREHYPTLL-R--SGKLE-----EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIES 250 (258)
Q Consensus 192 ~~t~~e~~~~i~~~~~~~~-~--~~~~~-----~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~ 250 (258)
..||.|+++.|.+.++... + +.... ...+.+..+|+.|+ +.+|+++++++++++++++.
T Consensus 212 ~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~~w~~~l~~~~~~ 279 (281)
T COG1091 212 ECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLPEWREALKALLDE 279 (281)
T ss_pred cccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCccHHHHHHHHHhh
Confidence 7799999999999986221 1 11111 34556678999999 77999999999999998865
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-27 Score=184.09 Aligned_cols=247 Identities=19% Similarity=0.167 Sum_probs=191.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchh--hccccC-cCCcEEEEEccCCCcccHHHHhC--CCcE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEH--LRELDG-ATERLHLFKANLLEEGSFDSAVD--GCDG 82 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--~~d~ 82 (258)
+|+.||||-||+-|++|++.|+++||+|+++.|+.+...... +..... ...++.++.+|++|...+..+++ ++|-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 578999999999999999999999999999999866544332 222221 13458999999999999999887 5899
Q ss_pred EEecCCCCC--CCCCCch-----------------------------------------------------hhHHHHHHH
Q 025065 83 VFHTASPVI--FLSDNPQ-----------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 83 Vih~a~~~~--~~~~~~~-----------------------------------------------------~~Y~~sK~~ 107 (258)
|+|+||++. .+...|. ++|+.+|+.
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY 161 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY 161 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence 999999964 3566665 899999999
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC--CccHHHHHHHHcCC---CCCC---CCcceeeHHHHHHHHHHhhcC
Q 025065 108 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 108 ~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~g~---~~~~---~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+-.+...|.+.+|+-.|.=+.++-=+|.....+ ..+...+.++..|. ..++ ..|||-|..|.++++...+++
T Consensus 162 a~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq 241 (345)
T COG1089 162 AYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQ 241 (345)
T ss_pred HHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHcc
Confidence 999999999999999988777777676544332 12344455666676 2344 899999999999999999999
Q ss_pred CCCCceEEEeCCCcCHHHHHHHHHHhCCCC-CC----------------------CCCCccCCCCccccCHHHH-HhcCC
Q 025065 180 PKASGRYLLAGSVAQHSDILKFLREHYPTL-LR----------------------SGKLEEKYQPTIKVSQERA-KSLGI 235 (258)
Q Consensus 180 ~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~-~~----------------------~~~~~~~~~~~~~~d~~k~-~~lg~ 235 (258)
+.+....+++|+..|++|+++...+..|.. .+ |....+....-..-|.+|+ +.|||
T Consensus 242 ~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~~~LGW 321 (345)
T COG1089 242 EEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAKEKLGW 321 (345)
T ss_pred CCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHHHHHHcCC
Confidence 874444488899999999999999888621 10 0011134445567889999 78999
Q ss_pred Cc-cchhHHHHHHHHHHHHc
Q 025065 236 NF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 236 ~p-~~~~~~l~~~~~~~~~~ 254 (258)
+| ++|++-+++++++-.+.
T Consensus 322 ~~~~~~~elv~~Mv~~dl~~ 341 (345)
T COG1089 322 RPEVSLEELVREMVEADLEA 341 (345)
T ss_pred ccccCHHHHHHHHHHHHHHH
Confidence 99 99999999999987553
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=191.28 Aligned_cols=217 Identities=20% Similarity=0.193 Sum_probs=146.0
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCCCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASPV 90 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~~~ 90 (258)
||||||+||||++++++|+++|++|++++|++..... ... .. ..|+.. +.+...+.++|+|||+|+..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~-------~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~ 68 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGAN--TKW-------EG--YKPWAP-LAESEALEGADAVINLAGEP 68 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCc--ccc-------ee--eecccc-cchhhhcCCCCEEEECCCCC
Confidence 6899999999999999999999999999998765321 000 01 112222 44556677899999999864
Q ss_pred CCCC-CC-----------ch---------------------------------------------hhHHHHHHHHHHHHH
Q 025065 91 IFLS-DN-----------PQ---------------------------------------------EWYSLAKTLAEEAAW 113 (258)
Q Consensus 91 ~~~~-~~-----------~~---------------------------------------------~~Y~~sK~~~e~~~~ 113 (258)
.... .. .. +.|+..+...|..+.
T Consensus 69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~ 148 (292)
T TIGR01777 69 IADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQ 148 (292)
T ss_pred cccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhh
Confidence 3210 00 00 123444555566544
Q ss_pred HHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHHhhcCCCCCceE-EE
Q 025065 114 KFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRY-LL 188 (258)
Q Consensus 114 ~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~-~~ 188 (258)
. .++.+++++++||+.+|||.... ...++....... ..++ +.++|+|++|+|+++..+++++...++| ++
T Consensus 149 ~-~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~ 223 (292)
T TIGR01777 149 A-AEDLGTRVVLLRTGIVLGPKGGA----LAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNAT 223 (292)
T ss_pred h-chhcCCceEEEeeeeEECCCcch----hHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEec
Confidence 3 34568999999999999996421 111221111111 1122 7899999999999999999987667788 45
Q ss_pred eCCCcCHHHHHHHHHHhCCCCC---CCCCCc--------cCCCCccccCHHHHHhcCCCc-c-chhHHH
Q 025065 189 AGSVAQHSDILKFLREHYPTLL---RSGKLE--------EKYQPTIKVSQERAKSLGINF-T-PWEVGV 244 (258)
Q Consensus 189 ~~~~~t~~e~~~~i~~~~~~~~---~~~~~~--------~~~~~~~~~d~~k~~~lg~~p-~-~~~~~l 244 (258)
+++.+|+.|+++.+++.+|... +|.+.. .....+..++++|++++||+| + +++|++
T Consensus 224 ~~~~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 224 APEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred CCCccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence 5789999999999999997421 222211 111246678899997799999 6 688864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-26 Score=207.80 Aligned_cols=241 Identities=19% Similarity=0.158 Sum_probs=166.7
Q ss_pred cEEEEECCcchHHHHHHHHHH--HCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcc------cHHHHhCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLL--QRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG------SFDSAVDGC 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------~~~~~~~~~ 80 (258)
|+|||||||||||++|+++|+ +.|++|++++|+........+... ....+++++.+|+++++ .+.++ .++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAY-WGADRVVPLVGDLTEPGLGLSEADIAEL-GDI 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHh-cCCCcEEEEecccCCccCCcCHHHHHHh-cCC
Confidence 479999999999999999999 578999999996433211111100 00146899999999853 44454 889
Q ss_pred cEEEecCCCCCCCCCCch----------------------------------------------------hhHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSDNPQ----------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 81 d~Vih~a~~~~~~~~~~~----------------------------------------------------~~Y~~sK~~~ 108 (258)
|+|||||+.......... +.|+.+|.++
T Consensus 79 D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~ 158 (657)
T PRK07201 79 DHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEA 158 (657)
T ss_pred CEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHH
Confidence 999999986432111000 3599999999
Q ss_pred HHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCc------cHHHHHHHHcCC---CCCC---CCcceeeHHHHHHHHHHh
Q 025065 109 EEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNF------GAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 109 e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~------~~~~~~~~~~g~---~~~~---~~~~~i~v~D~a~~~~~~ 176 (258)
|+++.+ ..+++++++||++|||+...+.... ....+..+.... +.++ ..++++|++|+++++..+
T Consensus 159 E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~ 235 (657)
T PRK07201 159 EKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHL 235 (657)
T ss_pred HHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHH
Confidence 999753 3589999999999999865432111 111222221111 1111 567999999999999999
Q ss_pred hcCCCCCc-eEE-EeCCCcCHHHHHHHHHHhCCCCC-------CCCCCc----------------------------cCC
Q 025065 177 LEVPKASG-RYL-LAGSVAQHSDILKFLREHYPTLL-------RSGKLE----------------------------EKY 219 (258)
Q Consensus 177 ~~~~~~~~-~~~-~~~~~~t~~e~~~~i~~~~~~~~-------~~~~~~----------------------------~~~ 219 (258)
++.+...| +|+ ++++++|+.|+++.+.+.+|... +|.... ...
T Consensus 236 ~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 315 (657)
T PRK07201 236 MHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDFV 315 (657)
T ss_pred hcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHhc
Confidence 88765545 785 45789999999999999987533 222110 112
Q ss_pred CCccccCHHHH-Hhc---CCCccchhHHHHHHHHHHHHc
Q 025065 220 QPTIKVSQERA-KSL---GINFTPWEVGVRGCIESLMEK 254 (258)
Q Consensus 220 ~~~~~~d~~k~-~~l---g~~p~~~~~~l~~~~~~~~~~ 254 (258)
.....+|++++ +.| |++++++.+.+..++.|+.++
T Consensus 316 ~~~~~f~~~~~~~~L~~~~~~~p~~~~~~~~~~~~~~~~ 354 (657)
T PRK07201 316 NYPTTFDSRETRAALKGSGIEVPRLASYAPRLWDYWERH 354 (657)
T ss_pred cCCCeeccHHHHHHhccCCcCCCChHHHHHHHHHHHHhc
Confidence 23457899999 666 677788999999998877654
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=190.10 Aligned_cols=173 Identities=28% Similarity=0.393 Sum_probs=138.9
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEEecCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFHTAS 88 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih~a~ 88 (258)
|||||||||||++|+++|+++|++|+.+.|+.......... .++.++.+|+.+.+.+.++++. +|+|||+|+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~ 74 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAA 74 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHHTESEEEEEBS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------ceEEEEEeeccccccccccccccCceEEEEeec
Confidence 79999999999999999999999999999887654221110 2689999999999999999975 599999999
Q ss_pred CCCC--CCCCch---------------------------------------------------hhHHHHHHHHHHHHHHH
Q 025065 89 PVIF--LSDNPQ---------------------------------------------------EWYSLAKTLAEEAAWKF 115 (258)
Q Consensus 89 ~~~~--~~~~~~---------------------------------------------------~~Y~~sK~~~e~~~~~~ 115 (258)
.... ....+. ++|+.+|..+|++++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~ 154 (236)
T PF01370_consen 75 FSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDY 154 (236)
T ss_dssp SSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8531 111111 67999999999999999
Q ss_pred HHHcCCcEEEEcCCccccCC--cCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCC-CCceEE
Q 025065 116 AKENGIDLVAIHPGTVIGPF--FQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPK-ASGRYL 187 (258)
Q Consensus 116 ~~~~~~~~~ilRp~~v~G~~--~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~ 187 (258)
.++++++++++||+.+|||. ..........++.++..|+ ..++ +.++|+|++|+|++++.+++++. .+++|+
T Consensus 155 ~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yN 234 (236)
T PF01370_consen 155 AKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYN 234 (236)
T ss_dssp HHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred ccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEE
Confidence 99899999999999999999 1111234566788888887 2233 88999999999999999999988 566886
Q ss_pred Ee
Q 025065 188 LA 189 (258)
Q Consensus 188 ~~ 189 (258)
++
T Consensus 235 ig 236 (236)
T PF01370_consen 235 IG 236 (236)
T ss_dssp ES
T ss_pred eC
Confidence 53
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-26 Score=175.67 Aligned_cols=224 Identities=18% Similarity=0.215 Sum_probs=148.2
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-CCcEEEecCCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-GCDGVFHTASP 89 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~Vih~a~~ 89 (258)
|+|||||||||++|+.+|.+.||+|++++|++..... +.... ....+.+.+... ++|+|||+||.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~-----------~~~~~---v~~~~~~~~~~~~~~DavINLAG~ 66 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ-----------NLHPN---VTLWEGLADALTLGIDAVINLAGE 66 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh-----------hcCcc---ccccchhhhcccCCCCEEEECCCC
Confidence 6899999999999999999999999999999876533 11111 112233444454 69999999998
Q ss_pred CCCCC-CCch------------------------------------hhHHHHHH------------HHHHHHHHH-----
Q 025065 90 VIFLS-DNPQ------------------------------------EWYSLAKT------------LAEEAAWKF----- 115 (258)
Q Consensus 90 ~~~~~-~~~~------------------------------------~~Y~~sK~------------~~e~~~~~~----- 115 (258)
.-... ..+. ..||.++- ...++|.+|
T Consensus 67 ~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~ 146 (297)
T COG1090 67 PIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEAL 146 (297)
T ss_pred ccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHh
Confidence 53322 2222 22332221 011222222
Q ss_pred -HHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCC-CCcceeeHHHHHHHHHHhhcCCCCCceE-EEeCCC
Q 025065 116 -AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRY-LLAGSV 192 (258)
Q Consensus 116 -~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~-~~~~~~ 192 (258)
++..|.+++++|.|.|.|+....- ..+...+...+-|+.--+ +.++|||++|+++++..+++++...|.| ..++.+
T Consensus 147 ~a~~~gtRvvllRtGvVLs~~GGaL-~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~P 225 (297)
T COG1090 147 QAQQLGTRVVLLRTGVVLSPDGGAL-GKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNP 225 (297)
T ss_pred hhhhcCceEEEEEEEEEecCCCcch-hhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCc
Confidence 233589999999999999753321 111111111111222222 8999999999999999999999999977 555999
Q ss_pred cCHHHHHHHHHHhCCCC---CCCCCCc--------cCCCCccccCHHHHHhcCCCc--cchhHHHHHHHH
Q 025065 193 AQHSDILKFLREHYPTL---LRSGKLE--------EKYQPTIKVSQERAKSLGINF--TPWEVGVRGCIE 249 (258)
Q Consensus 193 ~t~~e~~~~i~~~~~~~---~~~~~~~--------~~~~~~~~~d~~k~~~lg~~p--~~~~~~l~~~~~ 249 (258)
++..++...+.+.+... ++|.... ........+=+.|+...||++ +++++++++.+.
T Consensus 226 V~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 226 VRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred CcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 99999999999998532 3333322 113334445567776678888 899999998764
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=190.34 Aligned_cols=205 Identities=20% Similarity=0.229 Sum_probs=147.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC---CEEEEEEcCCCCccc-hhhc-ccc-------------C-----cCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG---YTVKATVRDPNSPKT-EHLR-ELD-------------G-----ATERLHL 62 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~-~~~-------------~-----~~~~~~~ 62 (258)
.++|+|||||||||||++|++.|++.+ .+|+++.|....... +.+. ++. . ...++.+
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 467999999999999999999999764 368999997654322 1111 100 0 0157899
Q ss_pred EEccCCCc-------ccHHHHhCCCcEEEecCCCCCCCCCCch-------------------------------------
Q 025065 63 FKANLLEE-------GSFDSAVDGCDGVFHTASPVIFLSDNPQ------------------------------------- 98 (258)
Q Consensus 63 ~~~Dl~~~-------~~~~~~~~~~d~Vih~a~~~~~~~~~~~------------------------------------- 98 (258)
+.+|++++ +.+..+++++|+|||+|+..+.......
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~ 168 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEK 168 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCC
Confidence 99999843 3466788899999999998654321111
Q ss_pred ---------h--------------------------------------------------------hHHHHHHHHHHHHH
Q 025065 99 ---------E--------------------------------------------------------WYSLAKTLAEEAAW 113 (258)
Q Consensus 99 ---------~--------------------------------------------------------~Y~~sK~~~e~~~~ 113 (258)
. .|+.||+++|.++.
T Consensus 169 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~ 248 (491)
T PLN02996 169 SGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLG 248 (491)
T ss_pred CceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHH
Confidence 0 19999999999998
Q ss_pred HHHHHcCCcEEEEcCCccccCCcCCCCCcc------HHHHHHHHcCC-C-CCC---CCcceeeHHHHHHHHHHhhcCC--
Q 025065 114 KFAKENGIDLVAIHPGTVIGPFFQPILNFG------AEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 114 ~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~------~~~~~~~~~g~-~-~~~---~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
.+. .+++++++||++|||+...+..... ..++.....|. . .++ +.+|++||+|++++++.++.+.
T Consensus 249 ~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~ 326 (491)
T PLN02996 249 NFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAG 326 (491)
T ss_pred Hhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhc
Confidence 764 3899999999999999876532211 22333334555 2 333 7899999999999999998753
Q ss_pred C--CCceEEEe-C--CCcCHHHHHHHHHHhCCCCCCC
Q 025065 181 K--ASGRYLLA-G--SVAQHSDILKFLREHYPTLLRS 212 (258)
Q Consensus 181 ~--~~~~~~~~-~--~~~t~~e~~~~i~~~~~~~~~~ 212 (258)
. ...+|+++ + .++|+.|+++.+.+.++..|..
T Consensus 327 ~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~ 363 (491)
T PLN02996 327 GQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWI 363 (491)
T ss_pred cCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCc
Confidence 1 23378554 6 6899999999999988765543
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=184.25 Aligned_cols=193 Identities=13% Similarity=0.109 Sum_probs=141.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhC----CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVD----GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d 81 (258)
++++|||||||||||++++++|+++|++|++++|+...... ..........++++++++|++|++.+.++++ ++|
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D 138 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVD 138 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence 56899999999999999999999999999999997644211 0000011112468999999999999999887 599
Q ss_pred EEEecCCCCCCCCCC-c----h-----------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEc
Q 025065 82 GVFHTASPVIFLSDN-P----Q-----------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIH 127 (258)
Q Consensus 82 ~Vih~a~~~~~~~~~-~----~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR 127 (258)
+||||++.......+ . . ..|..+|..+|+.+.. .+.+++++|+|
T Consensus 139 ~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~~~~~~sK~~~E~~l~~--~~~gl~~tIlR 216 (390)
T PLN02657 139 VVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPLLEFQRAKLKFEAELQA--LDSDFTYSIVR 216 (390)
T ss_pred EEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcchHHHHHHHHHHHHHHh--ccCCCCEEEEc
Confidence 999998753211110 0 0 4688999999988754 34799999999
Q ss_pred CCccccCCcCCCCCccHHHHHHHHcCCC--CCC---C-CcceeeHHHHHHHHHHhhcCCCCCc-eEEEe-C-CCcCHHHH
Q 025065 128 PGTVIGPFFQPILNFGAEVILNLINGDQ--SFA---F-PYIFVEIRDVVYAHIRALEVPKASG-RYLLA-G-SVAQHSDI 198 (258)
Q Consensus 128 p~~v~G~~~~~~~~~~~~~~~~~~~g~~--~~~---~-~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~-~~~t~~e~ 198 (258)
|+.+||+.. ..+..+..|++ +++ . ..+++|++|+|+++..++.++...+ +|+++ + +.+|++|+
T Consensus 217 p~~~~~~~~--------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Ei 288 (390)
T PLN02657 217 PTAFFKSLG--------GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQ 288 (390)
T ss_pred cHHHhcccH--------HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHH
Confidence 999997531 12344445552 334 2 3368999999999999998765444 78554 3 58999999
Q ss_pred HHHHHHhCCCC
Q 025065 199 LKFLREHYPTL 209 (258)
Q Consensus 199 ~~~i~~~~~~~ 209 (258)
++.+.+.+|..
T Consensus 289 a~~l~~~lG~~ 299 (390)
T PLN02657 289 GEMLFRILGKE 299 (390)
T ss_pred HHHHHHHhCCC
Confidence 99999999753
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.3e-24 Score=179.38 Aligned_cols=245 Identities=20% Similarity=0.273 Sum_probs=161.9
Q ss_pred EEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccc-hhh----cc--cc--CcC-CcEEEEEccCCCc------c
Q 025065 10 VVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKT-EHL----RE--LD--GAT-ERLHLFKANLLEE------G 71 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~----~~--~~--~~~-~~~~~~~~Dl~~~------~ 71 (258)
+|||||||||||++|+++|+++| ++|++++|+.+.... +.+ .. +. ... .++.++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999998 679999997653211 111 00 00 001 4789999999865 3
Q ss_pred cHHHHhCCCcEEEecCCCCCCCCCC-------c-----------------------------------------------
Q 025065 72 SFDSAVDGCDGVFHTASPVIFLSDN-------P----------------------------------------------- 97 (258)
Q Consensus 72 ~~~~~~~~~d~Vih~a~~~~~~~~~-------~----------------------------------------------- 97 (258)
.+..+..++|+|||+|+........ .
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG 160 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence 5666778899999999864321000 0
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC---ccHHHHHHHHcCCCCCC----CCcceeeHHHH
Q 025065 98 -QEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN---FGAEVILNLINGDQSFA----FPYIFVEIRDV 169 (258)
Q Consensus 98 -~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~g~~~~~----~~~~~i~v~D~ 169 (258)
.+.|+.+|..+|.+++.+... |++++++||+.+||+....... ....++...... ..+| ...+|+|++|+
T Consensus 161 ~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~vddv 238 (367)
T TIGR01746 161 LAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLAL-GAYPDSPELTEDLTPVDYV 238 (367)
T ss_pred cCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHh-CCCCCCCccccCcccHHHH
Confidence 025999999999999886554 9999999999999984432211 111122222221 1233 36789999999
Q ss_pred HHHHHHhhcCCCC---CceE-EEeCCCcCHHHHHHHHHHhCCCCC----CCCCCc---------------------cCC-
Q 025065 170 VYAHIRALEVPKA---SGRY-LLAGSVAQHSDILKFLREHYPTLL----RSGKLE---------------------EKY- 219 (258)
Q Consensus 170 a~~~~~~~~~~~~---~~~~-~~~~~~~t~~e~~~~i~~~~~~~~----~~~~~~---------------------~~~- 219 (258)
+++++.++.++.. .++| +.+++++++.|+++.+.+ .|... .+.|.. ...
T Consensus 239 a~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (367)
T TIGR01746 239 ARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQRLEDSDTAKRDPPRYPLLPLLHFLG 317 (367)
T ss_pred HHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHHHHHhhhcCCCcccccchhhhhccC
Confidence 9999999887654 4478 555789999999999988 54211 111100 000
Q ss_pred -------CCccccCHHHH----HhcCCCcc-chhHHHHHHHHHHHHcCCC
Q 025065 220 -------QPTIKVSQERA----KSLGINFT-PWEVGVRGCIESLMEKGFL 257 (258)
Q Consensus 220 -------~~~~~~d~~k~----~~lg~~p~-~~~~~l~~~~~~~~~~~~~ 257 (258)
.....++++++ +.++..++ --++.++++++++++.++|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (367)
T TIGR01746 318 AGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLLHLYLQYLKEIGFL 367 (367)
T ss_pred CCcccccccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 00124555555 33565553 3457889999999988875
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=172.43 Aligned_cols=236 Identities=12% Similarity=0.132 Sum_probs=143.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCC----------Ccc-----
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL----------EEG----- 71 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~~----- 71 (258)
..||||||||+||||++|+++|+++|++|+...++..+... ....+....+++-++-+-.. ++.
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~-v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~ 86 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRAS-LEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRA 86 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHH-HHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHH
Confidence 34789999999999999999999999999865433222111 00011111122222221111 110
Q ss_pred ------cHHHHhC--CCcEEEecCCC-CC------------CCCCC----chhhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 72 ------SFDSAVD--GCDGVFHTASP-VI------------FLSDN----PQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 72 ------~~~~~~~--~~d~Vih~a~~-~~------------~~~~~----~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
.+.+++. ++..++...+. .. ..+.. +.+.|+.+|+++|.++..+. +..++
T Consensus 87 Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~-----~~~~l 161 (298)
T PLN02778 87 NVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE-----NVCTL 161 (298)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh-----ccEEe
Confidence 1111111 23334432221 11 01111 11689999999999987764 46788
Q ss_pred cCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCceE-EEeCCCcCHHHHHHHHHHh
Q 025065 127 HPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRY-LLAGSVAQHSDILKFLREH 205 (258)
Q Consensus 127 Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~-~~~~~~~t~~e~~~~i~~~ 205 (258)
|+..++|+... ....++..++.+...+....+++|++|++++++.+++... .|+| +++++.+|+.|+++.+++.
T Consensus 162 r~~~~~~~~~~----~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~ 236 (298)
T PLN02778 162 RVRMPISSDLS----NPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNL-TGIYNFTNPGVVSHNEILEMYRDY 236 (298)
T ss_pred eecccCCcccc----cHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCCC-CCeEEeCCCCcccHHHHHHHHHHH
Confidence 98887876422 1223566666665322233589999999999999997643 4788 5568899999999999999
Q ss_pred CCCC----CCCCCCc----cCCCCccccCHHHH-HhcCCCccchhHHHHHHHHHHHH
Q 025065 206 YPTL----LRSGKLE----EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLME 253 (258)
Q Consensus 206 ~~~~----~~~~~~~----~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~~~~ 253 (258)
++.. .+..... .....+..+|++|+ +.++=.+...+++++..++-.+.
T Consensus 237 ~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (298)
T PLN02778 237 IDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKESLIKYVFEPNKK 293 (298)
T ss_pred hCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccchHHHHHHHHHHHHHh
Confidence 9742 1111100 11112336999999 66676668889999998887754
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.5e-24 Score=189.05 Aligned_cols=215 Identities=17% Similarity=0.170 Sum_probs=147.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
||||||||+||||++|+++|+++||+|++++|.+.... ..+++++.+|++++. +.+++.++|+|||+|+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~----------~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa 69 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL----------DPRVDYVCASLRNPV-LQELAGEADAVIHLAP 69 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc----------cCCceEEEccCCCHH-HHHHhcCCCEEEEcCc
Confidence 47999999999999999999999999999998653211 136789999999985 7788889999999998
Q ss_pred CCCCCCCCch----------------------hhHHH--HHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC-cc
Q 025065 89 PVIFLSDNPQ----------------------EWYSL--AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN-FG 143 (258)
Q Consensus 89 ~~~~~~~~~~----------------------~~Y~~--sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-~~ 143 (258)
.......... +.|+. ....+|.++ ..++++++++|++++||+....... ..
T Consensus 70 ~~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~~G~~~~~~~aE~ll----~~~~~p~~ILR~~nVYGp~~~~~~~r~I 145 (699)
T PRK12320 70 VDTSAPGGVGITGLAHVANAAARAGARLLFVSQAAGRPELYRQAETLV----STGWAPSLVIRIAPPVGRQLDWMVCRTV 145 (699)
T ss_pred cCccchhhHHHHHHHHHHHHHHHcCCeEEEEECCCCCCccccHHHHHH----HhcCCCEEEEeCceecCCCCcccHhHHH
Confidence 7422111111 22221 122456553 3457999999999999996443211 12
Q ss_pred HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCCCCCCCCccCCCCc
Q 025065 144 AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRY-LLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPT 222 (258)
Q Consensus 144 ~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~ 222 (258)
..++.....+ +...++|++|++++++.+++.+. .|+| +++++.+|+.|+++.+....+... +. .......
T Consensus 146 ~~~l~~~~~~-----~pI~vIyVdDvv~alv~al~~~~-~GiyNIG~~~~~Si~el~~~i~~~~p~~~-~~--~~~~~~~ 216 (699)
T PRK12320 146 ATLLRSKVSA-----RPIRVLHLDDLVRFLVLALNTDR-NGVVDLATPDTTNVVTAWRLLRSVDPHLR-TR--RVRSWEQ 216 (699)
T ss_pred HHHHHHHHcC-----CceEEEEHHHHHHHHHHHHhCCC-CCEEEEeCCCeeEHHHHHHHHHHhCCCcc-cc--ccccHHH
Confidence 2223222233 34557999999999999998743 5688 667899999999999987743221 11 1233345
Q ss_pred cccCHHHH-HhcCCCc-cchh--HHHHHH
Q 025065 223 IKVSQERA-KSLGINF-TPWE--VGVRGC 247 (258)
Q Consensus 223 ~~~d~~k~-~~lg~~p-~~~~--~~l~~~ 247 (258)
...|.+.+ ..++|.| ..++ +.+.++
T Consensus 217 ~~pdi~~a~~~~~w~~~~~~~~~~~~~~~ 245 (699)
T PRK12320 217 LIPEVDIAAVQEDWNFEFGWQATEAIVDT 245 (699)
T ss_pred hCCCCchhhhhcCCCCcchHHHHHHHHhh
Confidence 56777777 6689998 6554 344444
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=172.90 Aligned_cols=220 Identities=15% Similarity=0.133 Sum_probs=148.1
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh------CC-CcE
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV------DG-CDG 82 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------~~-~d~ 82 (258)
+||||||||++|++++++|+++|++|++++|+++.... .+++.+.+|+.|++.+.+++ .+ +|.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~----------~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~ 70 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG----------PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA 70 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC----------CCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence 48999999999999999999999999999998764321 35667889999999999998 57 999
Q ss_pred EEecCCCCCCCCCCch-----------------hh-----HHHHHHHHHHHHHHHHHH-cCCcEEEEcCCccccCCcCCC
Q 025065 83 VFHTASPVIFLSDNPQ-----------------EW-----YSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQPI 139 (258)
Q Consensus 83 Vih~a~~~~~~~~~~~-----------------~~-----Y~~sK~~~e~~~~~~~~~-~~~~~~ilRp~~v~G~~~~~~ 139 (258)
|+|+++.......... +. .+..+...|+. .++ .|++++++||+.+|++.....
T Consensus 71 v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~~~~~~~~~----l~~~~gi~~tilRp~~f~~~~~~~~ 146 (285)
T TIGR03649 71 VYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGGPAMGQVHAH----LDSLGGVEYTVLRPTWFMENFSEEF 146 (285)
T ss_pred EEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCCchHHHHHHH----HHhccCCCEEEEeccHHhhhhcccc
Confidence 9999875321110000 11 12233333433 444 499999999999987642211
Q ss_pred CCccHHHHHHHHc-CCCC--CC-CCcceeeHHHHHHHHHHhhcCCCCC-ceE-EEeCCCcCHHHHHHHHHHhCCCCC---
Q 025065 140 LNFGAEVILNLIN-GDQS--FA-FPYIFVEIRDVVYAHIRALEVPKAS-GRY-LLAGSVAQHSDILKFLREHYPTLL--- 210 (258)
Q Consensus 140 ~~~~~~~~~~~~~-g~~~--~~-~~~~~i~v~D~a~~~~~~~~~~~~~-~~~-~~~~~~~t~~e~~~~i~~~~~~~~--- 210 (258)
. ...+.. +... .+ ..++|++++|+|+++..++.++... +.| +.+++.+|+.|+++.+.+.+|...
T Consensus 147 ~------~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~ 220 (285)
T TIGR03649 147 H------VEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITHV 220 (285)
T ss_pred c------ccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEE
Confidence 0 111112 2211 12 7789999999999999999987544 467 566799999999999999997531
Q ss_pred -CCCCCc----------------------cCCCCccccCHHHH-HhcCCCccchhHHHHHHHH
Q 025065 211 -RSGKLE----------------------EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIE 249 (258)
Q Consensus 211 -~~~~~~----------------------~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~ 249 (258)
++.... ..........++.. +.+|.+|++|++.+++..+
T Consensus 221 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~~~~~~~~~~~ 283 (285)
T TIGR03649 221 KLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVTGSKPRGFRDFAESNKA 283 (285)
T ss_pred eCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHhCcCCccHHHHHHHhhh
Confidence 111000 00000111123444 6689999999999988743
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=171.39 Aligned_cols=197 Identities=22% Similarity=0.254 Sum_probs=159.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCC--C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDG--C 80 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~ 80 (258)
.++|+||||||+|-||++|++++++.+ .+++.++|+...-.. ..+..... ..++.++.||++|.+.+..++++ +
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHhcCCC
Confidence 468999999999999999999999987 578888887654322 11221111 36789999999999999999998 9
Q ss_pred cEEEecCCCCCC--CCCCch-------------------------------------hhHHHHHHHHHHHHHHHHHHc--
Q 025065 81 DGVFHTASPVIF--LSDNPQ-------------------------------------EWYSLAKTLAEEAAWKFAKEN-- 119 (258)
Q Consensus 81 d~Vih~a~~~~~--~~~~~~-------------------------------------~~Y~~sK~~~e~~~~~~~~~~-- 119 (258)
|+|+|+||.-+. .+.+|. |.||.||+.+|..+..+....
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmGaTKr~aE~~~~a~~~~~~~ 406 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMGATKRLAEKLFQAANRNVSG 406 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhhHHHHHHHHHHHHHhhccCC
Confidence 999999998654 566666 889999999999998887643
Q ss_pred -CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHHhhcCCCCCceEEEe-CCCc
Q 025065 120 -GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVA 193 (258)
Q Consensus 120 -~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~ 193 (258)
+..++++|+|||.|... +-.+.+..++.+|+ ..+. -.|-|+.+.|.++.++.+......+.+|+.. |+++
T Consensus 407 ~~T~f~~VRFGNVlGSrG----SViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~~gGeifvldMGepv 482 (588)
T COG1086 407 TGTRFCVVRFGNVLGSRG----SVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGEPV 482 (588)
T ss_pred CCcEEEEEEecceecCCC----CCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCCCe
Confidence 38999999999999752 33555666677776 2233 5788999999999999999987666699777 8999
Q ss_pred CHHHHHHHHHHhCC
Q 025065 194 QHSDILKFLREHYP 207 (258)
Q Consensus 194 t~~e~~~~i~~~~~ 207 (258)
++.|+++.+.+..|
T Consensus 483 kI~dLAk~mi~l~g 496 (588)
T COG1086 483 KIIDLAKAMIELAG 496 (588)
T ss_pred EHHHHHHHHHHHhC
Confidence 99999999999987
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.9e-24 Score=169.03 Aligned_cols=193 Identities=22% Similarity=0.247 Sum_probs=137.2
Q ss_pred EEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccc--hhhccccCcCCcE----EEEEccCCCcccHHHHhC--CCc
Q 025065 11 VCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKT--EHLRELDGATERL----HLFKANLLEEGSFDSAVD--GCD 81 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~--~~~~~~~~~~~~~----~~~~~Dl~~~~~~~~~~~--~~d 81 (258)
||||||+|.||++|+++|++.+ .++++++++...... ..+... ....++ ..+.+|++|.+.+..+++ ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~-~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSR-FPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHH-C--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhc-ccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 7999999999999999999987 589999987644322 111100 001223 346899999999999998 899
Q ss_pred EEEecCCCCCC--CCCCch-------------------------------------hhHHHHHHHHHHHHHHHHHHc---
Q 025065 82 GVFHTASPVIF--LSDNPQ-------------------------------------EWYSLAKTLAEEAAWKFAKEN--- 119 (258)
Q Consensus 82 ~Vih~a~~~~~--~~~~~~-------------------------------------~~Y~~sK~~~e~~~~~~~~~~--- 119 (258)
+|+|+||.-+. .+.+|. +.||.||+.+|.++..+....
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmGatKrlaE~l~~~~~~~~~~~ 159 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMGATKRLAEKLVQAANQYSGNS 159 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHHHHHHHHHHHHHHHCCTSSSS
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHHHHHHHHHHHHHHHhhhCCCC
Confidence 99999999654 555555 889999999999998887654
Q ss_pred CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCC-CC---CCcceeeHHHHHHHHHHhhcCCCCCceEEEe-CCCcC
Q 025065 120 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQS-FA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQ 194 (258)
Q Consensus 120 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~-~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~t 194 (258)
+..++++|+|+|.|.. .+-.+.+..++.+|.++ +. -.|-|+.+++.++.++.+......+.+|+.. |++++
T Consensus 160 ~t~f~~VRFGNVlgS~----GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~~geifvl~mg~~v~ 235 (293)
T PF02719_consen 160 DTKFSSVRFGNVLGSR----GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAKGGEIFVLDMGEPVK 235 (293)
T ss_dssp --EEEEEEE-EETTGT----TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH--TTEEEEE---TCEE
T ss_pred CcEEEEEEecceecCC----CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCCCCcEEEecCCCCcC
Confidence 6899999999999875 23456677777777632 33 5688999999999999999887666688776 89999
Q ss_pred HHHHHHHHHHhCCC
Q 025065 195 HSDILKFLREHYPT 208 (258)
Q Consensus 195 ~~e~~~~i~~~~~~ 208 (258)
+.|+++.+.+..|.
T Consensus 236 I~dlA~~~i~~~g~ 249 (293)
T PF02719_consen 236 ILDLAEAMIELSGL 249 (293)
T ss_dssp CCCHHHHHHHHTT-
T ss_pred HHHHHHHHHhhccc
Confidence 99999999999873
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-22 Score=153.35 Aligned_cols=242 Identities=16% Similarity=0.138 Sum_probs=173.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-----cCCcEEEEEccCCCcccHHHHhC--CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-----ATERLHLFKANLLEEGSFDSAVD--GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~--~~d 81 (258)
|..||||-||.=|++|++.|+++||+|+++.|+.+......++.+-. ....+..+.+|++|...+.+++. .++
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt 108 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT 108 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence 46799999999999999999999999999999877654433322221 13568899999999999999887 478
Q ss_pred EEEecCCCCCC--CCCCch------------------------------------------------------hhHHHHH
Q 025065 82 GVFHTASPVIF--LSDNPQ------------------------------------------------------EWYSLAK 105 (258)
Q Consensus 82 ~Vih~a~~~~~--~~~~~~------------------------------------------------------~~Y~~sK 105 (258)
-|+|+|++.+. +..-+. ++|+.+|
T Consensus 109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aK 188 (376)
T KOG1372|consen 109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAK 188 (376)
T ss_pred hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhh
Confidence 99999998654 222222 8999999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC--CccHHHHHHHHcCC---CCCC---CCcceeeHHHHHHHHHHhh
Q 025065 106 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 106 ~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~g~---~~~~---~~~~~i~v~D~a~~~~~~~ 177 (258)
+.+-.++-.|.+.+++-.|.=-.++--.|....+. ..+..-+.++..|. ..++ ..+||-|..|.++|++..+
T Consensus 189 my~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mL 268 (376)
T KOG1372|consen 189 MYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLML 268 (376)
T ss_pred hhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHH
Confidence 99999888888887775553323332233322211 01122233333444 2334 7899999999999999999
Q ss_pred cCCCCCceEEEeCCCcCHHHHHHHHHHhCCCC-CCCC---------------------CCccCCCCccccCHHHH-HhcC
Q 025065 178 EVPKASGRYLLAGSVAQHSDILKFLREHYPTL-LRSG---------------------KLEEKYQPTIKVSQERA-KSLG 234 (258)
Q Consensus 178 ~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~-~~~~---------------------~~~~~~~~~~~~d~~k~-~~lg 234 (258)
+++.+....+.+++..|++|+++.-....|.. .+.. ...+.......-|.+|+ +.||
T Consensus 269 Q~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasKAk~~Lg 348 (376)
T KOG1372|consen 269 QQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASKAKKTLG 348 (376)
T ss_pred hcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcCChHHHHHhhC
Confidence 99876666688999999999999877766531 1110 00033344556789999 8899
Q ss_pred CCc-cchhHHHHHHHHH
Q 025065 235 INF-TPWEVGVRGCIES 250 (258)
Q Consensus 235 ~~p-~~~~~~l~~~~~~ 250 (258)
|+| .++.+-+++++..
T Consensus 349 W~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 349 WKPKVTFPELVKEMVAS 365 (376)
T ss_pred CCCccCHHHHHHHHHHh
Confidence 999 9999999998763
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-21 Score=151.81 Aligned_cols=239 Identities=19% Similarity=0.195 Sum_probs=170.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.++..+-|.|||||+|+.+++.|.+.|.+|++..|..+.... .+..+ +.-..+-++..|+.|+++++++++..++|||
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r-~lkvm-GdLGQvl~~~fd~~DedSIr~vvk~sNVVIN 136 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPR-HLKVM-GDLGQVLFMKFDLRDEDSIRAVVKHSNVVIN 136 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchh-heeec-ccccceeeeccCCCCHHHHHHHHHhCcEEEE
Confidence 355677899999999999999999999999999997655432 11111 1124688999999999999999999999999
Q ss_pred cCCCC----CCCCCCch--------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCC
Q 025065 86 TASPV----IFLSDNPQ--------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPG 129 (258)
Q Consensus 86 ~a~~~----~~~~~~~~--------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~ 129 (258)
+.|-. .++..+.. +-|-.+|.++|..+++.. -..||+||+
T Consensus 137 LIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~s~Sr~LrsK~~gE~aVrdaf----PeAtIirPa 212 (391)
T KOG2865|consen 137 LIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVKSPSRMLRSKAAGEEAVRDAF----PEATIIRPA 212 (391)
T ss_pred eeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccccChHHHHHhhhhhHHHHHhhC----Ccceeechh
Confidence 99963 22222222 678999999999987754 579999999
Q ss_pred ccccCCcCCCCCccHHHHHHHHcCC-CCCC----CCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEeCCCcCHHHHHHHH
Q 025065 130 TVIGPFFQPILNFGAEVILNLINGD-QSFA----FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLAGSVAQHSDILKFL 202 (258)
Q Consensus 130 ~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~----~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~~~~~t~~e~~~~i 202 (258)
.|||..+..- .....++.+ -|- ++++ ...+.+||-|+|.+|+.++..+...| +| .++++..++.|+++++
T Consensus 213 ~iyG~eDrfl-n~ya~~~rk--~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~m 289 (391)
T KOG2865|consen 213 DIYGTEDRFL-NYYASFWRK--FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIM 289 (391)
T ss_pred hhcccchhHH-HHHHHHHHh--cCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHHHHHHHH
Confidence 9999876532 111222222 333 4444 56789999999999999999998888 89 8889999999999988
Q ss_pred HHhCCC------CCCCCCCc------------------------cCCCCccccCHHHH-HhcCCCccchhHHHHHHHHHH
Q 025065 203 REHYPT------LLRSGKLE------------------------EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESL 251 (258)
Q Consensus 203 ~~~~~~------~~~~~~~~------------------------~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~~ 251 (258)
-+..-. .++|.... .....+...+.... ++||.++++++...-+.+..|
T Consensus 290 y~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~t~le~~~~e~l~~y 369 (391)
T KOG2865|consen 290 YDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVLTKLELYPVEFLRQY 369 (391)
T ss_pred HHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcCCCCcHhhcCceeeecccccHHHHHHH
Confidence 665421 11211111 11112334445555 778999888887665555545
Q ss_pred HH
Q 025065 252 ME 253 (258)
Q Consensus 252 ~~ 253 (258)
++
T Consensus 370 R~ 371 (391)
T KOG2865|consen 370 RK 371 (391)
T ss_pred hh
Confidence 44
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.4e-22 Score=158.27 Aligned_cols=161 Identities=23% Similarity=0.317 Sum_probs=99.9
Q ss_pred EECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccc-hhh-cccc----------CcCCcEEEEEccCCCc------cc
Q 025065 13 VTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKT-EHL-RELD----------GATERLHLFKANLLEE------GS 72 (258)
Q Consensus 13 ItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~-~~~~----------~~~~~~~~~~~Dl~~~------~~ 72 (258)
|||||||+|++|+++|++++. +|+++.|..+.... +.+ +.+. ....+++++.||++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999876 99999997654221 222 1111 0146899999999986 45
Q ss_pred HHHHhCCCcEEEecCCCCCCCCCCch------------------------------------------------------
Q 025065 73 FDSAVDGCDGVFHTASPVIFLSDNPQ------------------------------------------------------ 98 (258)
Q Consensus 73 ~~~~~~~~d~Vih~a~~~~~~~~~~~------------------------------------------------------ 98 (258)
+..+.+++|+|||||+.++.......
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP 160 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence 66777889999999999866433222
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC--c-cHHHHHH-HHcCC-CCCC----CCccee
Q 025065 99 -----EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--F-GAEVILN-LINGD-QSFA----FPYIFV 164 (258)
Q Consensus 99 -----~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~-~~~~~~~-~~~g~-~~~~----~~~~~i 164 (258)
+.|..||+.+|++++.+.++.|++++|+||+.|+|....+... . ...++.. +..|. +..+ ...+++
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~v 240 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLV 240 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EE
T ss_pred hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEE
Confidence 7899999999999999988889999999999999954433221 1 2333333 33444 4333 469999
Q ss_pred eHHHHHHHH
Q 025065 165 EIRDVVYAH 173 (258)
Q Consensus 165 ~v~D~a~~~ 173 (258)
+|+.+|++|
T Consensus 241 PVD~va~aI 249 (249)
T PF07993_consen 241 PVDYVARAI 249 (249)
T ss_dssp EHHHHHHHH
T ss_pred CHHHHHhhC
Confidence 999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=151.97 Aligned_cols=181 Identities=18% Similarity=0.179 Sum_probs=124.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC-------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++++||||||+|+||++++++|+++|++|++++|+..+........+.. ....+.++.+|+++.+++.++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999998754321111111111 12357889999999998887765
Q ss_pred CCcEEEecCCCCCCCC---CCc---h-------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNP---Q-------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~---~-------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+|+...... ... . +.|+.+|..+|
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~ 164 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALE 164 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHHHH
Confidence 4799999999743211 111 0 67999999999
Q ss_pred HHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-CCCc-e
Q 025065 110 EAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-KASG-R 185 (258)
Q Consensus 110 ~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~ 185 (258)
.+++.+..+. +++++++||+.++|+....... .........+.+ ...+.+++|+|+++..++... ...| +
T Consensus 165 ~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~d~a~~~~~~~~~~~~~~g~~ 238 (249)
T PRK09135 165 MLTRSLALELAPEVRVNAVAPGAILWPEDGNSFD--EEARQAILARTP----LKRIGTPEDIAEAVRFLLADASFITGQI 238 (249)
T ss_pred HHHHHHHHHHCCCCeEEEEEeccccCccccccCC--HHHHHHHHhcCC----cCCCcCHHHHHHHHHHHcCccccccCcE
Confidence 9999988764 6999999999999997543221 122222222221 122346899999997666543 2345 6
Q ss_pred EEEe-CCCc
Q 025065 186 YLLA-GSVA 193 (258)
Q Consensus 186 ~~~~-~~~~ 193 (258)
|+++ +..+
T Consensus 239 ~~i~~g~~~ 247 (249)
T PRK09135 239 LAVDGGRSL 247 (249)
T ss_pred EEECCCeec
Confidence 7554 4443
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=153.30 Aligned_cols=191 Identities=23% Similarity=0.212 Sum_probs=134.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
.|++|||||+|+||++++++|+++|++|++++|+..... .+.. ..+.++.++++|+++.+++.++++ ++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~--~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALD--DLKA--RYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHH--hccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999999999999999998753321 1111 112468899999999988877654 47
Q ss_pred cEEEecCCCCCCCCCC---ch-----------------------------------------------hhHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSDN---PQ-----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 81 d~Vih~a~~~~~~~~~---~~-----------------------------------------------~~Y~~sK~~~e~ 110 (258)
|+|||+||........ .. +.|+.+|...|.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 157 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG 157 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence 9999999975332110 00 679999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCcc---ccCCcCCCC-----C-ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTV---IGPFFQPIL-----N-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v---~G~~~~~~~-----~-~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+++.++++ +|++++++||+.+ ||++..... . .....+.+.+... ...-+.+++|++++++.++.
T Consensus 158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~a~~~~~~ 233 (276)
T PRK06482 158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADG----SFAIPGDPQKMVQAMIASAD 233 (276)
T ss_pred HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhc----cCCCCCCHHHHHHHHHHHHc
Confidence 99888766 5999999999988 555332110 0 0111122222222 11225689999999999998
Q ss_pred CCCCCceE-EEeCCCcCHHHHHHHHHHhC
Q 025065 179 VPKASGRY-LLAGSVAQHSDILKFLREHY 206 (258)
Q Consensus 179 ~~~~~~~~-~~~~~~~t~~e~~~~i~~~~ 206 (258)
.+.....| +++++..++.|++..+.+.+
T Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 262 (276)
T PRK06482 234 QTPAPRRLTLGSDAYASIRAALSERLAAL 262 (276)
T ss_pred CCCCCeEEecChHHHHHHHHHHHHHHHHH
Confidence 76555567 44577778888877776655
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=151.51 Aligned_cols=185 Identities=21% Similarity=0.241 Sum_probs=129.6
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||+ .++++++|||||+|+||++++++|+++|++|++++|+++.... ....+...+..+.++++|+++.+.+.++++
T Consensus 1 ~~~-~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (262)
T PRK13394 1 MMS-NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANA-VADEINKAGGKAIGVAMDVTNEDAVNAGIDKV 78 (262)
T ss_pred Ccc-cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH-HHHHHHhcCceEEEEECCCCCHHHHHHHHHHH
Confidence 555 3567899999999999999999999999999999987643321 122222223467889999999998877665
Q ss_pred -----CCcEEEecCCCCCCCC--CCch-------------------------------------------------hhHH
Q 025065 79 -----GCDGVFHTASPVIFLS--DNPQ-------------------------------------------------EWYS 102 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~--~~~~-------------------------------------------------~~Y~ 102 (258)
++|+|||+|+...... ..+. +.|+
T Consensus 79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~ 158 (262)
T PRK13394 79 AERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYV 158 (262)
T ss_pred HHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccH
Confidence 3899999999753211 0000 4699
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCc--------cHHHHHHHHcCCCCCCCCcceeeHHHHHH
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNF--------GAEVILNLINGDQSFAFPYIFVEIRDVVY 171 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~i~v~D~a~ 171 (258)
.+|...+.+++.++.+ .+++++++||+.++++........ ......++..+.. ..++|++++|+++
T Consensus 159 ~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva~ 235 (262)
T PRK13394 159 TAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKT---VDGVFTTVEDVAQ 235 (262)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCC---CCCCCCCHHHHHH
Confidence 9999999998888765 489999999999999853321100 0111222222211 4568999999999
Q ss_pred HHHHhhcCCCC--Cc-eEEEeC
Q 025065 172 AHIRALEVPKA--SG-RYLLAG 190 (258)
Q Consensus 172 ~~~~~~~~~~~--~~-~~~~~~ 190 (258)
++..++..+.. .| .|++++
T Consensus 236 a~~~l~~~~~~~~~g~~~~~~~ 257 (262)
T PRK13394 236 TVLFLSSFPSAALTGQSFVVSH 257 (262)
T ss_pred HHHHHcCccccCCcCCEEeeCC
Confidence 99999986532 35 455554
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=164.94 Aligned_cols=139 Identities=11% Similarity=0.156 Sum_probs=95.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 99 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 99 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+.|+.+|+++|+++..+. +..++|+.++||..... ...++..++.....+.-..+..+++|++.+++.+++
T Consensus 510 ~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~----~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~ 580 (668)
T PLN02260 510 SFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSN----PRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAK 580 (668)
T ss_pred ChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCC----ccHHHHHHhccceeeccCCCceehhhHHHHHHHHHH
Confidence 789999999999987753 57788888888754221 123455555444212112356788899999888887
Q ss_pred CCCCCceE-EEeCCCcCHHHHHHHHHHhCC-C---CCCCCC--C---ccCCCCccccCHHHH-HhcCCCccchhHHHHHH
Q 025065 179 VPKASGRY-LLAGSVAQHSDILKFLREHYP-T---LLRSGK--L---EEKYQPTIKVSQERA-KSLGINFTPWEVGVRGC 247 (258)
Q Consensus 179 ~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~-~---~~~~~~--~---~~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~ 247 (258)
. ...|+| +++++.+|+.|+++.+.+.++ . .++... . ....+.. .+|++|+ +.+|+ +++++++|+++
T Consensus 581 ~-~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~-~l~~~k~~~~~~~-~~~~~~~l~~~ 657 (668)
T PLN02260 581 R-NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNN-EMDASKLKKEFPE-LLSIKESLIKY 657 (668)
T ss_pred h-CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccc-cccHHHHHHhCcc-ccchHHHHHHH
Confidence 4 335788 555778999999999999874 2 111111 0 0123344 8999999 66898 89999999998
Q ss_pred HH
Q 025065 248 IE 249 (258)
Q Consensus 248 ~~ 249 (258)
+.
T Consensus 658 ~~ 659 (668)
T PLN02260 658 VF 659 (668)
T ss_pred Hh
Confidence 75
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.7e-20 Score=146.54 Aligned_cols=181 Identities=22% Similarity=0.224 Sum_probs=124.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++++++||||+|+||++++++|+++|++|++++|+...........+.....++.++++|+++++++.++++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4568999999999999999999999999999998875432111111111113457889999999998877664
Q ss_pred CCcEEEecCCCCCCCCCCch-----------------------------------------------hhHHHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNPQ-----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~~-----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
++|+|||+|+........+. +.|+.+|..+|.+
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~ 163 (248)
T PRK07806 84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDA 163 (248)
T ss_pred CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHH
Confidence 58999999986422111111 3689999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCC-ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-eE
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RY 186 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~ 186 (258)
++.++.+ .++++++++|+.+-++....... ........ .. . ....+++++|++++++.+++.+...| +|
T Consensus 164 ~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~---~~--~-~~~~~~~~~dva~~~~~l~~~~~~~g~~~ 237 (248)
T PRK07806 164 LRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEA---RR--E-AAGKLYTVSEFAAEVARAVTAPVPSGHIE 237 (248)
T ss_pred HHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHH---HH--h-hhcccCCHHHHHHHHHHHhhccccCccEE
Confidence 9988764 58999999999877653221000 00100000 00 0 23469999999999999999776667 66
Q ss_pred EEeCCC
Q 025065 187 LLAGSV 192 (258)
Q Consensus 187 ~~~~~~ 192 (258)
++++..
T Consensus 238 ~i~~~~ 243 (248)
T PRK07806 238 YVGGAD 243 (248)
T ss_pred EecCcc
Confidence 555443
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=176.46 Aligned_cols=196 Identities=21% Similarity=0.281 Sum_probs=139.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC----CEEEEEEcCCCCccc-hhhccc--------cCcCCcEEEEEccCCCc----
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG----YTVKATVRDPNSPKT-EHLREL--------DGATERLHLFKANLLEE---- 70 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~-~~~~~~--------~~~~~~~~~~~~Dl~~~---- 70 (258)
.++|||||||||+|++|+++|++++ ++|+++.|....... ..+... .....++.++.+|++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4789999999999999999999887 789999997543321 111100 00123689999999754
Q ss_pred --ccHHHHhCCCcEEEecCCCCCCCCCCc---------------------------------------------------
Q 025065 71 --GSFDSAVDGCDGVFHTASPVIFLSDNP--------------------------------------------------- 97 (258)
Q Consensus 71 --~~~~~~~~~~d~Vih~a~~~~~~~~~~--------------------------------------------------- 97 (258)
+.+.++..++|+|||+|+..+......
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~ 1130 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGG 1130 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccC
Confidence 456667778999999998743210000
Q ss_pred ----------------hhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC---CCCC
Q 025065 98 ----------------QEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA 158 (258)
Q Consensus 98 ----------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~---~~~~ 158 (258)
.+.|+.+|+.+|.++..+.+ .|++++++||+.|||+...+.. ....++..++.+. ..+|
T Consensus 1131 ~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~-~~~~~~~~~~~~~~~~~~~p 1208 (1389)
T TIGR03443 1131 AGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGAT-NTDDFLLRMLKGCIQLGLIP 1208 (1389)
T ss_pred CCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCC-CchhHHHHHHHHHHHhCCcC
Confidence 03499999999999988765 4999999999999999655432 1222333333222 2233
Q ss_pred ---CCcceeeHHHHHHHHHHhhcCCCC--C-ceEEE-eCCCcCHHHHHHHHHHh
Q 025065 159 ---FPYIFVEIRDVVYAHIRALEVPKA--S-GRYLL-AGSVAQHSDILKFLREH 205 (258)
Q Consensus 159 ---~~~~~i~v~D~a~~~~~~~~~~~~--~-~~~~~-~~~~~t~~e~~~~i~~~ 205 (258)
..++|++++|++++++.++.++.. . .+|++ ++..+++.++++.+.+.
T Consensus 1209 ~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1209 NINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred CCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence 678999999999999999876542 2 26744 56789999999999765
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.5e-20 Score=146.97 Aligned_cols=177 Identities=16% Similarity=0.105 Sum_probs=124.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++|+||||||+|+||++|+++|.++|++|+++.|+.................++.++.+|+.+++++.++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 4568999999999999999999999999998877765433221111121223568899999999998887664
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+|+....... ... ..|+.+|...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~ 163 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGL 163 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHH
Confidence 57999999996433210 000 5699999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++++ .+++++++||+.++|+....... ...... .+.. ....+++++|+++++..++.+.. ..
T Consensus 164 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~~~~----~~~~-~~~~~~~~~dva~~~~~~~~~~~~~~~ 236 (249)
T PRK12825 164 VGLTKALARELAEYGITVNMVAPGDIDTDMKEATIE--EAREAK----DAET-PLGRSGTPEDIARAVAFLCSDASDYIT 236 (249)
T ss_pred HHHHHHHHHHHhhcCeEEEEEEECCccCCccccccc--hhHHhh----hccC-CCCCCcCHHHHHHHHHHHhCccccCcC
Confidence 9998887665 58999999999999987543211 111111 1011 23348999999999999997653 24
Q ss_pred c-eEEEe
Q 025065 184 G-RYLLA 189 (258)
Q Consensus 184 ~-~~~~~ 189 (258)
| +|.++
T Consensus 237 g~~~~i~ 243 (249)
T PRK12825 237 GQVIEVT 243 (249)
T ss_pred CCEEEeC
Confidence 5 56444
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-19 Score=145.88 Aligned_cols=198 Identities=18% Similarity=0.174 Sum_probs=136.5
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc--CCcEEEEEccCCCcccHHHHhC--
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
...|+++++|||||+|+||++++++|.++|++|++++|+.+.... ....+... ..++.++.+|+++++++.++++
T Consensus 2 ~~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (276)
T PRK05875 2 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAA-AAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA 80 (276)
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence 334677999999999999999999999999999999987543221 11111111 2467889999999988887765
Q ss_pred -----CCcEEEecCCCCCC----CCCCch-----------------------------------------------hhHH
Q 025065 79 -----GCDGVFHTASPVIF----LSDNPQ-----------------------------------------------EWYS 102 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~----~~~~~~-----------------------------------------------~~Y~ 102 (258)
++|+|||+|+.... ...... +.|+
T Consensus 81 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 160 (276)
T PRK05875 81 TAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYG 160 (276)
T ss_pred HHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchH
Confidence 68999999986421 111110 5699
Q ss_pred HHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 103 LAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+|...|.+++.++++. +++++++||+.+.++....... ............ ....+.+++|+++++..++..
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~ 235 (276)
T PRK05875 161 VTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSADYRACT----PLPRVGEVEDVANLAMFLLSD 235 (276)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHHHHHcCC----CCCCCcCHHHHHHHHHHHcCc
Confidence 99999999999887664 6999999999998764332111 111112222221 223467899999999999987
Q ss_pred CCC--Cc-eEEEe-CCCc----CHHHHHHHHHHhC
Q 025065 180 PKA--SG-RYLLA-GSVA----QHSDILKFLREHY 206 (258)
Q Consensus 180 ~~~--~~-~~~~~-~~~~----t~~e~~~~i~~~~ 206 (258)
+.. .| .++++ +..+ +..|+++.+.+..
T Consensus 236 ~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 270 (276)
T PRK05875 236 AASWITGQVINVDGGHMLRRGPDFSSMLEPVFGAD 270 (276)
T ss_pred hhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHH
Confidence 643 35 56544 5554 7777777776554
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-20 Score=143.71 Aligned_cols=145 Identities=32% Similarity=0.463 Sum_probs=112.1
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCCCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASPV 90 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~~~ 90 (258)
|+|+||||++|+.++++|+++|++|+++.|++++... ..+++++++|+.|++.+.++++++|+|||+++..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhhhcchhhhhhhhh
Confidence 7999999999999999999999999999998754321 3689999999999999999999999999999853
Q ss_pred CCCCCCch--------------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccc
Q 025065 91 IFLSDNPQ--------------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVI 132 (258)
Q Consensus 91 ~~~~~~~~--------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~ 132 (258)
........ ..|...|..+|+.+ ++.+++++++||+.+|
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~----~~~~~~~~ivrp~~~~ 147 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEAL----RESGLNWTIVRPGWIY 147 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHH----HHSTSEEEEEEESEEE
T ss_pred cccccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHH----HhcCCCEEEEECcEeE
Confidence 22100000 26788888888775 4569999999999999
Q ss_pred cCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 133 GPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 133 G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
|+..... ..... .+. ...++++.+|+|++++.++++
T Consensus 148 ~~~~~~~-~~~~~------~~~----~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 148 GNPSRSY-RLIKE------GGP----QGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp BTTSSSE-EEESS------TST----TSHCEEEHHHHHHHHHHHHH-
T ss_pred eCCCcce-eEEec------cCC----CCcCcCCHHHHHHHHHHHhCC
Confidence 9874321 11000 111 456899999999999998864
|
... |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=145.02 Aligned_cols=184 Identities=21% Similarity=0.137 Sum_probs=126.1
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||...+++|+++||||+|+||++++++|+++|++|++++|+.... ....++.....++.++.+|+++.+++.++++
T Consensus 1 ~~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (260)
T PRK12823 1 MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVH--EVAAELRAAGGEALALTADLETYAGAQAAMAAA 78 (260)
T ss_pred CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHH--HHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHH
Confidence 667777889999999999999999999999999999999864211 1112221123467889999999887776654
Q ss_pred -----CCcEEEecCCCCCC--C--CCCch---------------------------------------------hhHHHH
Q 025065 79 -----GCDGVFHTASPVIF--L--SDNPQ---------------------------------------------EWYSLA 104 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~--~--~~~~~---------------------------------------------~~Y~~s 104 (258)
++|+|||+|+.... . ..... .+|+.+
T Consensus 79 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y~~s 158 (260)
T PRK12823 79 VEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPYSAA 158 (260)
T ss_pred HHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCccHHH
Confidence 58999999985311 0 10000 479999
Q ss_pred HHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCC--------C-CCc-cHHHHHHHHcCCCCCCCCcceeeHHHHHH
Q 025065 105 KTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP--------I-LNF-GAEVILNLINGDQSFAFPYIFVEIRDVVY 171 (258)
Q Consensus 105 K~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~--------~-~~~-~~~~~~~~~~g~~~~~~~~~~i~v~D~a~ 171 (258)
|.+.+.+++.++.+. |+++++++||.++++.... . ... ...++.....+. ...-+.+++|+|+
T Consensus 159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~ 234 (260)
T PRK12823 159 KGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSS----LMKRYGTIDEQVA 234 (260)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccC----CcccCCCHHHHHH
Confidence 999999999988764 8999999999999974110 0 000 112222222222 1223568999999
Q ss_pred HHHHhhcCCC--CCc-eEEEeC
Q 025065 172 AHIRALEVPK--ASG-RYLLAG 190 (258)
Q Consensus 172 ~~~~~~~~~~--~~~-~~~~~~ 190 (258)
+++.++.... ..| .+++++
T Consensus 235 ~~~~l~s~~~~~~~g~~~~v~g 256 (260)
T PRK12823 235 AILFLASDEASYITGTVLPVGG 256 (260)
T ss_pred HHHHHcCcccccccCcEEeecC
Confidence 9999886542 345 455543
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-19 Score=144.90 Aligned_cols=191 Identities=23% Similarity=0.191 Sum_probs=136.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+++++||||+|+||++++++|+++|++|++++|++..... ....+. ..++.++++|+.+.+++.+++. ++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAA-FADALG--DARFVPVACDLTDAASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999987644321 111111 2368899999999998877665 48
Q ss_pred cEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 81 d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
|+|||+++...... ..+. ..|+.+|.+.+.+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~y~~sK~a~~~~ 158 (257)
T PRK07074 79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYSAAKAGLIHY 158 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCCCcccHHHHHHHHHH
Confidence 99999999753211 1110 3799999999999
Q ss_pred HHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc-e
Q 025065 112 AWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-R 185 (258)
Q Consensus 112 ~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~ 185 (258)
++.++++. |++++++||+.++++...........+........ ..++|++++|+++++..++... ...| .
T Consensus 159 ~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~ 234 (257)
T PRK07074 159 TKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWY----PLQDFATPDDVANAVLFLASPAARAITGVC 234 (257)
T ss_pred HHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCchhcCcCCcE
Confidence 99988654 79999999999988753321111222222222221 3567999999999999999753 2346 4
Q ss_pred EEE-eCCCcCHHHHHHHHHHh
Q 025065 186 YLL-AGSVAQHSDILKFLREH 205 (258)
Q Consensus 186 ~~~-~~~~~t~~e~~~~i~~~ 205 (258)
+++ ++...+..|+.+.+...
T Consensus 235 ~~~~~g~~~~~~~~~~~~~~~ 255 (257)
T PRK07074 235 LPVDGGLTAGNREMARTLTLE 255 (257)
T ss_pred EEeCCCcCcCChhhhhhhccc
Confidence 444 46777899999887543
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.4e-20 Score=160.88 Aligned_cols=201 Identities=21% Similarity=0.290 Sum_probs=137.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC---EEEEEEcCCCCccc-hhhc-ccc------------C------cCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY---TVKATVRDPNSPKT-EHLR-ELD------------G------ATERLHL 62 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~-~~~------------~------~~~~~~~ 62 (258)
.++++|||||||||||++|++.|++.+. +|+++.|....... +.+. ++. . ...++.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 3679999999999999999999998754 68999997654321 2221 110 0 0247899
Q ss_pred EEccCCCc------ccHHHHhCCCcEEEecCCCCCCCCCCch--------------------------------------
Q 025065 63 FKANLLEE------GSFDSAVDGCDGVFHTASPVIFLSDNPQ-------------------------------------- 98 (258)
Q Consensus 63 ~~~Dl~~~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~-------------------------------------- 98 (258)
+.+|++++ +..+.+.+++|+|||+|+..........
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~ 276 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ 276 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCC
Confidence 99999997 3456666789999999998764321111
Q ss_pred -----------------------------------------------------------------------hhHHHHHHH
Q 025065 99 -----------------------------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 99 -----------------------------------------------------------------------~~Y~~sK~~ 107 (258)
+.|..||..
T Consensus 277 G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~l 356 (605)
T PLN02503 277 GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAM 356 (605)
T ss_pred CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHH
Confidence 348889999
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC------ccHHHHHHHHcCC-CCCC----CCcceeeHHHHHHHHHHh
Q 025065 108 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN------FGAEVILNLINGD-QSFA----FPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 108 ~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~------~~~~~~~~~~~g~-~~~~----~~~~~i~v~D~a~~~~~~ 176 (258)
+|.++.++. .+++++|+||+.|.+....+... .....+.....|. ..+. ...|+++||.++.+++.+
T Consensus 357 AE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a 434 (605)
T PLN02503 357 GEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAA 434 (605)
T ss_pred HHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHH
Confidence 999998654 47999999999995432222100 0111111122343 2222 688999999999999998
Q ss_pred hcC-C----CCCceEEEe-C--CCcCHHHHHHHHHHhCCC
Q 025065 177 LEV-P----KASGRYLLA-G--SVAQHSDILKFLREHYPT 208 (258)
Q Consensus 177 ~~~-~----~~~~~~~~~-~--~~~t~~e~~~~i~~~~~~ 208 (258)
+.. . ....+|+++ + +++++.|+.+.+.+.+..
T Consensus 435 ~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 435 MAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred HHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 431 1 123488654 6 799999999999987643
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-20 Score=152.39 Aligned_cols=194 Identities=18% Similarity=0.233 Sum_probs=131.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccc-hhhcccc--------CcCCcEEEEEccCCCc------cc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKT-EHLRELD--------GATERLHLFKANLLEE------GS 72 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-~~~~~~~--------~~~~~~~~~~~Dl~~~------~~ 72 (258)
+++|+||||||+|.+|+.+|+.+- .+|+|++|..++... ..+++.. ....+++.+.+|+..+ ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999999865 599999998774422 2222111 1247899999999954 56
Q ss_pred HHHHhCCCcEEEecCCCCCCCCC-----Cch-------------------------------------------------
Q 025065 73 FDSAVDGCDGVFHTASPVIFLSD-----NPQ------------------------------------------------- 98 (258)
Q Consensus 73 ~~~~~~~~d~Vih~a~~~~~~~~-----~~~------------------------------------------------- 98 (258)
+..+.+.+|.|||+|+.++.-.. .+.
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV 160 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence 77888889999999998763111 111
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC---CCCC---CCcceeeHH
Q 025065 99 -----EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA---FPYIFVEIR 167 (258)
Q Consensus 99 -----~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~---~~~~---~~~~~i~v~ 167 (258)
+.|++||+.+|.+++..... |++++|+|||.|-|....+.. ....++.+++.+- ..+| ...+.+.++
T Consensus 161 ~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~-n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~p~~ 238 (382)
T COG3320 161 GQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGAL-NTRDFLTRLVLGLLQLGIAPDSEYSLDMLPVD 238 (382)
T ss_pred cCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCcc-ccchHHHHHHHHHHHhCCCCCcccchhhCccc
Confidence 78999999999999997766 999999999999998764322 2233444443332 2333 333444433
Q ss_pred HHHH-----------HHHHhhcCCC-CCceEE--EeCCCcCHHHHHHHHHH
Q 025065 168 DVVY-----------AHIRALEVPK-ASGRYL--LAGSVAQHSDILKFLRE 204 (258)
Q Consensus 168 D~a~-----------~~~~~~~~~~-~~~~~~--~~~~~~t~~e~~~~i~~ 204 (258)
.+++ ++..+..++. ....|. .-|..+.+.++.+++.+
T Consensus 239 ~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 239 HVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred eeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 3333 3333332222 122343 33889999999999988
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-19 Score=146.44 Aligned_cols=191 Identities=21% Similarity=0.129 Sum_probs=134.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|+||||||+|+||++++++|+++|++|++++|++..... +.. .....+.++++|+++++++.+++. +
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLAD--LAE--KYGDRLLPLALDVTDRAAVFAAVETAVEHFGR 77 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHH--HHH--hccCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999999999987543211 111 112457888999999988876654 5
Q ss_pred CcEEEecCCCCCCCCCC--c-h-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSDN--P-Q-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~~--~-~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||........ . . +.|+.+|...+
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~ 157 (275)
T PRK08263 78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE 157 (275)
T ss_pred CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence 79999999985431110 0 0 57999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC---c---cHHHHHHHHcCCCCCCCCcce-eeHHHHHHHHHHhhcC
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN---F---GAEVILNLINGDQSFAFPYIF-VEIRDVVYAHIRALEV 179 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~---~---~~~~~~~~~~g~~~~~~~~~~-i~v~D~a~~~~~~~~~ 179 (258)
.+.+.++.+ +|++++++|||.+.++....... . .......+.... ....+ .+++|++++++.+++.
T Consensus 158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~dva~~~~~l~~~ 233 (275)
T PRK08263 158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQW----SERSVDGDPEAAAEALLKLVDA 233 (275)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHH----HhccCCCCHHHHHHHHHHHHcC
Confidence 998888765 68999999999998764321100 0 011111111110 22345 8999999999999998
Q ss_pred CCCCceE-EEe-CCCcCHHHHHHHHHHh
Q 025065 180 PKASGRY-LLA-GSVAQHSDILKFLREH 205 (258)
Q Consensus 180 ~~~~~~~-~~~-~~~~t~~e~~~~i~~~ 205 (258)
+...+.| +++ ++.+++.++.+.+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 234 ENPPLRLFLGSGVLDLAKADYERRLATW 261 (275)
T ss_pred CCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence 8777766 444 3578888988888774
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=144.55 Aligned_cols=185 Identities=18% Similarity=0.164 Sum_probs=124.7
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||+. ++++||||||+|+||++++++|+++|++|++..|+...........+.....++.++.+|+++++++..+++
T Consensus 1 ~~~~--~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (252)
T PRK06077 1 MYSL--KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKAT 78 (252)
T ss_pred CCCC--CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHH
Confidence 5543 468999999999999999999999999998877654322112222222222356788999999988776654
Q ss_pred -----CCcEEEecCCCCCCCC----CCch--------------------------------------------hhHHHHH
Q 025065 79 -----GCDGVFHTASPVIFLS----DNPQ--------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~----~~~~--------------------------------------------~~Y~~sK 105 (258)
++|+|||+||...... .... +.|+.+|
T Consensus 79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 158 (252)
T PRK06077 79 IDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMK 158 (252)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHH
Confidence 5799999999732211 1100 6899999
Q ss_pred HHHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCC
Q 025065 106 TLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKAS 183 (258)
Q Consensus 106 ~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~ 183 (258)
...|.+++.++++. ++.+.+++|+.+.++.................. . +.....+++++|+|++++.++..+...
T Consensus 159 ~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~dva~~~~~~~~~~~~~ 235 (252)
T PRK06077 159 AAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE-K--FTLMGKILDPEEVAEFVAAILKIESIT 235 (252)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH-h--cCcCCCCCCHHHHHHHHHHHhCccccC
Confidence 99999999988765 689999999999876432110000000001110 0 112346899999999999999876555
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| .|++++
T Consensus 236 g~~~~i~~ 243 (252)
T PRK06077 236 GQVFVLDS 243 (252)
T ss_pred CCeEEecC
Confidence 5 675554
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.4e-19 Score=143.48 Aligned_cols=180 Identities=19% Similarity=0.191 Sum_probs=125.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++++||||||+|+||++++++|+++|++|++++|++.+... ....+.....++.++.+|+++++++.++++ +
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAA-AAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999999999999999998654322 112222223568899999999998887765 5
Q ss_pred CcEEEecCCCCCCCCC--Cch------------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSD--NPQ------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~--~~~------------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+|+....... .+. +.|+.+|...+
T Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~ 161 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLI 161 (258)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHH
Confidence 8999999997533210 000 68999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCc--------cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNF--------GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
.+++.++.+ .+++++++||+.++++........ ............ . ..+++++++|+|+++..++.
T Consensus 162 ~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~d~a~~~~~l~~ 238 (258)
T PRK12429 162 GLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPL--V-PQKRFTTVEEIADYALFLAS 238 (258)
T ss_pred HHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhcc--C-CccccCCHHHHHHHHHHHcC
Confidence 888877654 479999999999998764321100 000011111100 0 34679999999999999987
Q ss_pred CCC--CCc-eEEEeC
Q 025065 179 VPK--ASG-RYLLAG 190 (258)
Q Consensus 179 ~~~--~~~-~~~~~~ 190 (258)
... ..| .|+.++
T Consensus 239 ~~~~~~~g~~~~~~~ 253 (258)
T PRK12429 239 FAAKGVTGQAWVVDG 253 (258)
T ss_pred ccccCccCCeEEeCC
Confidence 643 235 555554
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.8e-19 Score=143.94 Aligned_cols=180 Identities=16% Similarity=0.104 Sum_probs=127.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+|+||||+|+||++++++|+++|++|++++|+..+.. .....+.....++.++.+|+.+++++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAA-ATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999999999854322 1222222223458899999999998888775
Q ss_pred CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~~ 107 (258)
.+|+|||+++....... ... ..|+.+|..
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a 162 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAG 162 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHH
Confidence 58999999987543110 010 359999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--C
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--A 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 182 (258)
++.+++.+..+ .+++++++||+.++|+........ .+......+. ....+++++|+|.++..++..+. .
T Consensus 163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~ 236 (251)
T PRK12826 163 LVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA--QWAEAIAAAI----PLGRLGEPEDIAAAVLFLASDEARYI 236 (251)
T ss_pred HHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch--HHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCc
Confidence 99999887655 489999999999999865432211 1111111121 22358999999999999887653 2
Q ss_pred Cc-eEEEeCCC
Q 025065 183 SG-RYLLAGSV 192 (258)
Q Consensus 183 ~~-~~~~~~~~ 192 (258)
.| .|.+.++.
T Consensus 237 ~g~~~~~~~g~ 247 (251)
T PRK12826 237 TGQTLPVDGGA 247 (251)
T ss_pred CCcEEEECCCc
Confidence 35 56665543
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=147.37 Aligned_cols=184 Identities=20% Similarity=0.180 Sum_probs=125.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc--CcCCcEEEEEccCCCcccHHHHh-------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAV------- 77 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~------- 77 (258)
+++++|||||+|+||++++++|+++|++|++++|+++.... ...... ....++.++.+|++|++++.+ +
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQEN-LLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 45789999999999999999999999999999987644322 111111 112468899999999988765 3
Q ss_pred CCCcEEEecCCCCCCCCCC--c-h-----------------------------------------------hhHHHHHHH
Q 025065 78 DGCDGVFHTASPVIFLSDN--P-Q-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 78 ~~~d~Vih~a~~~~~~~~~--~-~-----------------------------------------------~~Y~~sK~~ 107 (258)
.++|+|||+|+........ + . +.|+.+|..
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~ 159 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYA 159 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHH
Confidence 3479999999875421110 0 0 579999999
Q ss_pred HHHHHHHHHH---HcCCcEEEEcCCccccCCcCCCCC----------ccHHHHHHHHcCCCCCC-CCcceeeHHHHHHHH
Q 025065 108 AEEAAWKFAK---ENGIDLVAIHPGTVIGPFFQPILN----------FGAEVILNLINGDQSFA-FPYIFVEIRDVVYAH 173 (258)
Q Consensus 108 ~e~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~----------~~~~~~~~~~~g~~~~~-~~~~~i~v~D~a~~~ 173 (258)
.+.+++.++. .+|++++++|||.++++....... .....+..+.. ..+ ....+++++|+|+++
T Consensus 160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~~ 236 (280)
T PRK06914 160 LEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK---HINSGSDTFGNPIDVANLI 236 (280)
T ss_pred HHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH---HHhhhhhccCCHHHHHHHH
Confidence 9999888763 458999999999998874221100 00111111110 000 234578999999999
Q ss_pred HHhhcCCCCCceEEEe-CCCcCH
Q 025065 174 IRALEVPKASGRYLLA-GSVAQH 195 (258)
Q Consensus 174 ~~~~~~~~~~~~~~~~-~~~~t~ 195 (258)
+.++.++.....|+++ +..+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~ 259 (280)
T PRK06914 237 VEIAESKRPKLRYPIGKGVKLMI 259 (280)
T ss_pred HHHHcCCCCCcccccCCchHHHH
Confidence 9999987665556544 554444
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=142.92 Aligned_cols=180 Identities=19% Similarity=0.129 Sum_probs=124.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++++||||||+|+||++++++|+++|++|++++|++.... .+... ...++..+.+|+++.+++.++++ +
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~--~l~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA--DFEAL--HPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH--HHHhh--cCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999999999999999999764321 11111 12457889999999998877665 4
Q ss_pred CcEEEecCCCCCCCCCC--ch------------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSDN--PQ------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~~--~~------------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||........ +. +.|+.+|...|
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~ 158 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE 158 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence 79999999985321110 00 57999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC----ccHHH---HHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN----FGAEV---ILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~----~~~~~---~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+++.++.+ +|++++++||+.+.++....... ..... +.......... ....+..++|+|++++.+++.
T Consensus 159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~~l~~ 237 (277)
T PRK06180 159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAK-SGKQPGDPAKAAQAILAAVES 237 (277)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhh-ccCCCCCHHHHHHHHHHHHcC
Confidence 999888765 58999999999998764322110 11111 11110000000 234467899999999999998
Q ss_pred CCCCceEEEeCC
Q 025065 180 PKASGRYLLAGS 191 (258)
Q Consensus 180 ~~~~~~~~~~~~ 191 (258)
+.....|+.+++
T Consensus 238 ~~~~~~~~~g~~ 249 (277)
T PRK06180 238 DEPPLHLLLGSD 249 (277)
T ss_pred CCCCeeEeccHH
Confidence 765556655543
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=139.04 Aligned_cols=178 Identities=25% Similarity=0.299 Sum_probs=121.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc-ccHHHHh-CCCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAV-DGCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~-~~~d~Vi 84 (258)
.+|+||||||+|+||+.++++|+++||+|+++.|+.++... ... ...+++++++|+++. +.+.+.+ .++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~~----~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKT-SLP----QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHH-hcc----cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence 46899999999999999999999999999999988654211 011 124689999999984 6677777 6899999
Q ss_pred ecCCCCCC-CCCCc-----h-----------------------h------------hHH---------HHHHHHHHHHHH
Q 025065 85 HTASPVIF-LSDNP-----Q-----------------------E------------WYS---------LAKTLAEEAAWK 114 (258)
Q Consensus 85 h~a~~~~~-~~~~~-----~-----------------------~------------~Y~---------~sK~~~e~~~~~ 114 (258)
|+++.... ..... . . .|. .+|..+|++
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~--- 167 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKY--- 167 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHH---
Confidence 99886421 11100 0 1 122 234455544
Q ss_pred HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEe---
Q 025065 115 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RY-LLA--- 189 (258)
Q Consensus 115 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~--- 189 (258)
.++.+++++++||++++++...... . ...+.. ...++++.+|+|+++..++..+...+ ++ +.+
T Consensus 168 -l~~~gi~~~iirpg~~~~~~~~~~~--~------~~~~~~---~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~ 235 (251)
T PLN00141 168 -IRKSGINYTIVRPGGLTNDPPTGNI--V------MEPEDT---LYEGSISRDQVAEVAVEALLCPESSYKVVEIVARAD 235 (251)
T ss_pred -HHhcCCcEEEEECCCccCCCCCceE--E------ECCCCc---cccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCC
Confidence 3456899999999999976422110 0 000100 22358999999999999999877544 55 554
Q ss_pred CCCcCHHHHHHHHHH
Q 025065 190 GSVAQHSDILKFLRE 204 (258)
Q Consensus 190 ~~~~t~~e~~~~i~~ 204 (258)
+...++.+++..+++
T Consensus 236 ~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 236 APKRSYKDLFASIKQ 250 (251)
T ss_pred CCchhHHHHHHHhhc
Confidence 234799999988765
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=142.15 Aligned_cols=180 Identities=17% Similarity=0.139 Sum_probs=122.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++++++||||+|+||++++++|.++|++|++++|+..... .....+.....++.++.+|+++++++.++++ +
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCE-ELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4578999999999999999999999999999988653321 1111111112457888999999998887665 5
Q ss_pred CcEEEecCCCCCCCCCC---ch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSDN---PQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~~---~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+|+........ .. ..|+.+|.+.|
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 167 (274)
T PRK07775 88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLE 167 (274)
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHH
Confidence 79999999975321110 00 46999999999
Q ss_pred HHHHHHHHHc---CCcEEEEcCCccccCCcCC-CCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCce
Q 025065 110 EAAWKFAKEN---GIDLVAIHPGTVIGPFFQP-ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR 185 (258)
Q Consensus 110 ~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 185 (258)
.+++.++.+. |++++++|||.+.++.... ........+....... ....+.++|++|+|++++.+++++....+
T Consensus 168 ~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~a~~~~~~~~~~~~~ 245 (274)
T PRK07775 168 AMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG--QARHDYFLRASDLARAITFVAETPRGAHV 245 (274)
T ss_pred HHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc--ccccccccCHHHHHHHHHHHhcCCCCCCe
Confidence 9999887664 8999999999886552111 1011111111111100 00346799999999999999987643335
Q ss_pred EEEe
Q 025065 186 YLLA 189 (258)
Q Consensus 186 ~~~~ 189 (258)
|++.
T Consensus 246 ~~~~ 249 (274)
T PRK07775 246 VNME 249 (274)
T ss_pred eEEe
Confidence 5444
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-19 Score=142.85 Aligned_cols=191 Identities=17% Similarity=0.217 Sum_probs=130.6
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|...|+++++|||||+|+||++++++|+++|++|++++|+.+.. .....+.....++.++.+|+++++++.++++
T Consensus 1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (258)
T PRK08628 1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD--EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTV 78 (258)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 44456789999999999999999999999999999999876543 2222222223568899999999998887764
Q ss_pred ----CCcEEEecCCCCCCCCCCc--h----------------------------------------------hhHHHHHH
Q 025065 79 ----GCDGVFHTASPVIFLSDNP--Q----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~~~~--~----------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||......... . ..|+.+|.
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 158 (258)
T PRK08628 79 AKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKG 158 (258)
T ss_pred HhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHH
Confidence 5899999999642211000 0 67999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC---ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN---FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
..+.+++.++.+ .+++++.++||.++++....... ........+... .+....+..++|+|++++.++...
T Consensus 159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l~~~~ 235 (258)
T PRK08628 159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK---IPLGHRMTTAEEIADTAVFLLSER 235 (258)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc---CCccccCCCHHHHHHHHHHHhChh
Confidence 999999988754 58999999999999985322110 001111111111 111124678999999999999764
Q ss_pred --CCCc-eEEEeCCCcCHHH
Q 025065 181 --KASG-RYLLAGSVAQHSD 197 (258)
Q Consensus 181 --~~~~-~~~~~~~~~t~~e 197 (258)
...| .+...+....+++
T Consensus 236 ~~~~~g~~~~~~gg~~~~~~ 255 (258)
T PRK08628 236 SSHTTGQWLFVDGGYVHLDR 255 (258)
T ss_pred hccccCceEEecCCcccccc
Confidence 3345 4455554444443
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-18 Score=138.99 Aligned_cols=179 Identities=21% Similarity=0.190 Sum_probs=121.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-------CCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------DGC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~ 80 (258)
++++|||||+|+||++++++|+++|++|++++|+...... ....+.....++.++++|+.+++++.+++ .++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEA-AAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 3689999999999999999999999999999997543211 11111111346889999999998665543 458
Q ss_pred cEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 81 d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e~ 110 (258)
|+|||+++...... ..+. +.|+.+|...+.
T Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~ 159 (255)
T TIGR01963 80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG 159 (255)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence 99999998753211 0110 569999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+++.++.+ .+++++++||+.++++....... .....+...+.+.. +.+++++++|+|++++.++..
T Consensus 160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~a~~~~~~~~~ 236 (255)
T TIGR01963 160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQ---PTKRFVTVDEVAETALFLASD 236 (255)
T ss_pred HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccC---ccccCcCHHHHHHHHHHHcCc
Confidence 98877654 48999999999999885221100 00000111111000 456799999999999999986
Q ss_pred CC--CCc-eEEEeC
Q 025065 180 PK--ASG-RYLLAG 190 (258)
Q Consensus 180 ~~--~~~-~~~~~~ 190 (258)
+. ..| .|++++
T Consensus 237 ~~~~~~g~~~~~~~ 250 (255)
T TIGR01963 237 AAAGITGQAIVLDG 250 (255)
T ss_pred cccCccceEEEEcC
Confidence 43 234 565553
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-18 Score=139.05 Aligned_cols=180 Identities=18% Similarity=0.129 Sum_probs=123.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
.+|++|||||+|+||++++++|.++|++|++++++..+........+.....++.++.+|++|.+++.++++ .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999999999999998887654322111112221123468889999999998887764 4
Q ss_pred CcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||...... .... ..|+.+|...|
T Consensus 88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~ 167 (258)
T PRK09134 88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALW 167 (258)
T ss_pred CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHHH
Confidence 799999999743211 1111 36999999999
Q ss_pred HHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-eE
Q 025065 110 EAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RY 186 (258)
Q Consensus 110 ~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~ 186 (258)
.+.+.++++. ++.++.++||.++..... ....+.....+. .......++|+|++++.+++++...| .+
T Consensus 168 ~~~~~la~~~~~~i~v~~i~PG~v~t~~~~-----~~~~~~~~~~~~----~~~~~~~~~d~a~~~~~~~~~~~~~g~~~ 238 (258)
T PRK09134 168 TATRTLAQALAPRIRVNAIGPGPTLPSGRQ-----SPEDFARQHAAT----PLGRGSTPEEIAAAVRYLLDAPSVTGQMI 238 (258)
T ss_pred HHHHHHHHHhcCCcEEEEeecccccCCccc-----ChHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhcCCCcCCCEE
Confidence 9999987764 489999999998764321 111122222221 11235789999999999999876667 45
Q ss_pred EEe-CCCcCH
Q 025065 187 LLA-GSVAQH 195 (258)
Q Consensus 187 ~~~-~~~~t~ 195 (258)
..+ +..+++
T Consensus 239 ~i~gg~~~~~ 248 (258)
T PRK09134 239 AVDGGQHLAW 248 (258)
T ss_pred EECCCeeccc
Confidence 554 343433
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-18 Score=138.49 Aligned_cols=166 Identities=13% Similarity=0.042 Sum_probs=122.0
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||...+++|++|||||+|+||++++++|+++|++|++++|+... .....+.++++|+++.+.+.++++
T Consensus 1 ~~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~----------~~~~~~~~~~~D~~~~~~~~~~~~~~ 70 (252)
T PRK08220 1 MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLT----------QEDYPFATFVLDVSDAAAVAQVCQRL 70 (252)
T ss_pred CCccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhh----------hcCCceEEEEecCCCHHHHHHHHHHH
Confidence 56666778999999999999999999999999999999987511 012457889999999998888765
Q ss_pred -----CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHH
Q 025065 79 -----GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~ 103 (258)
.+|+|||+++....... ... +.|+.
T Consensus 71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~ 150 (252)
T PRK08220 71 LAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGA 150 (252)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHH
Confidence 37999999997533111 100 56999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCc---cHHH----HHHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNF---GAEV----ILNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~---~~~~----~~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
+|...+.+++.++.+ +++++++++|+.++++........ .... ......+. ....+.+++|+|+++
T Consensus 151 sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~ 226 (252)
T PRK08220 151 SKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGI----PLGKIARPQEIANAV 226 (252)
T ss_pred HHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcC----CCcccCCHHHHHHHH
Confidence 999999999888876 689999999999999853211000 0000 01111111 345689999999999
Q ss_pred HHhhcCC
Q 025065 174 IRALEVP 180 (258)
Q Consensus 174 ~~~~~~~ 180 (258)
+.++...
T Consensus 227 ~~l~~~~ 233 (252)
T PRK08220 227 LFLASDL 233 (252)
T ss_pred HHHhcch
Confidence 9998753
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-18 Score=138.32 Aligned_cols=179 Identities=17% Similarity=0.129 Sum_probs=124.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG------ 79 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------ 79 (258)
+++++++||||+|+||++++++|+++|++|+++.++......+....+.....++.++.+|+++++.+.++++.
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 45789999999999999999999999999987655432221122222222234688999999999988877653
Q ss_pred -CcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 80 -CDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 80 -~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
+|+|||+|+....... ... +.|+.+|.+.
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 163 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGM 163 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHH
Confidence 7999999998543211 001 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-CCc
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-ASG 184 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~ 184 (258)
+.+++.+..+ .++++++++|+.+.++..... ..........+. ..+.+.+++|++++++.+++... ..|
T Consensus 164 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~edva~~~~~~~~~~~~~~g 236 (247)
T PRK12935 164 LGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV---PEEVRQKIVAKI----PKKRFGQADEIAKGVVYLCRDGAYITG 236 (247)
T ss_pred HHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---cHHHHHHHHHhC----CCCCCcCHHHHHHHHHHHcCcccCccC
Confidence 9888887765 489999999999987642211 111112222222 45678999999999999987642 234
Q ss_pred -eEEEeCC
Q 025065 185 -RYLLAGS 191 (258)
Q Consensus 185 -~~~~~~~ 191 (258)
.|++++.
T Consensus 237 ~~~~i~~g 244 (247)
T PRK12935 237 QQLNINGG 244 (247)
T ss_pred CEEEeCCC
Confidence 6655543
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-18 Score=138.24 Aligned_cols=177 Identities=19% Similarity=0.205 Sum_probs=122.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+|+++||||+|+||++++++|.++|++|++++|+..+......+.+.....++.++.+|+++++++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 36899999999999999999999999999999875432212222222223468899999999988776654 57
Q ss_pred cEEEecCCCCCCCC--------CC---------------------------------c--h---------------hhHH
Q 025065 81 DGVFHTASPVIFLS--------DN---------------------------------P--Q---------------EWYS 102 (258)
Q Consensus 81 d~Vih~a~~~~~~~--------~~---------------------------------~--~---------------~~Y~ 102 (258)
|+|||+||...... .. . . +.|+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 161 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC 161 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence 99999998742210 00 0 0 6799
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+|.+.|.+++.++.+ +|++++++|||.+.++...... .........+. . ....|.++.|+++++..++..
T Consensus 162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~---~~~~~~~~~~~--~-~~~~~~~~~d~a~~i~~l~~~ 235 (256)
T PRK12745 162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT---AKYDALIAKGL--V-PMPRWGEPEDVARAVAALASG 235 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc---hhHHhhhhhcC--C-CcCCCcCHHHHHHHHHHHhCC
Confidence 9999999999988764 6899999999999887533211 11111111111 1 234578999999999988865
Q ss_pred CC--CCc-eEEEeC
Q 025065 180 PK--ASG-RYLLAG 190 (258)
Q Consensus 180 ~~--~~~-~~~~~~ 190 (258)
.. ..| .|.+++
T Consensus 236 ~~~~~~G~~~~i~g 249 (256)
T PRK12745 236 DLPYSTGQAIHVDG 249 (256)
T ss_pred cccccCCCEEEECC
Confidence 42 245 555554
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=137.49 Aligned_cols=178 Identities=19% Similarity=0.194 Sum_probs=122.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEE-EcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
.+++++||||+|+||++++++|+++|++|+++ .|+.+.. .+...++...+.++.++.+|+++++++.++++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAA-EETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45899999999999999999999999998764 5544321 11112222224568899999999998887765
Q ss_pred CCcEEEecCCCCCCCCCC---ch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDN---PQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~---~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+|+........ .. ..|+.+|.+.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~ 161 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAAL 161 (250)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHH
Confidence 479999999874321110 00 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
|.+++.++.+ .++++++++|+.+.++..... .......... .... ....++.++|+|+++..++.++. ..
T Consensus 162 ~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~-~~~~~~~~~~-~~~~---~~~~~~~~~dva~~~~~~~~~~~~~~~ 236 (250)
T PRK08063 162 EALTRYLAVELAPKGIAVNAVSGGAVDTDALKHF-PNREELLEDA-RAKT---PAGRMVEPEDVANAVLFLCSPEADMIR 236 (250)
T ss_pred HHHHHHHHHHHhHhCeEEEeEecCcccCchhhhc-cCchHHHHHH-hcCC---CCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence 9999888765 589999999999987653221 1111122121 1111 12347899999999999997653 24
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| .++..+
T Consensus 237 g~~~~~~g 244 (250)
T PRK08063 237 GQTIIVDG 244 (250)
T ss_pred CCEEEECC
Confidence 5 455544
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-18 Score=130.97 Aligned_cols=239 Identities=15% Similarity=0.050 Sum_probs=177.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC-CCE-EEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR-GYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~ 82 (258)
+..+|||||+.|.+|..++..|..+ |.+ |+.-+...++. ..+ ..-.++..|+.|...+++++- ++|.
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~--~V~-------~~GPyIy~DILD~K~L~eIVVn~RIdW 113 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA--NVT-------DVGPYIYLDILDQKSLEEIVVNKRIDW 113 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch--hhc-------ccCCchhhhhhccccHHHhhcccccce
Confidence 4578999999999999999999865 654 55443322221 111 234678899999999999873 5999
Q ss_pred EEecCCCCCC-CCCCch---------------------------------------------------hhHHHHHHHHHH
Q 025065 83 VFHTASPVIF-LSDNPQ---------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 83 Vih~a~~~~~-~~~~~~---------------------------------------------------~~Y~~sK~~~e~ 110 (258)
++|..+..+. .+.+.- +.||.||..+|-
T Consensus 114 L~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL 193 (366)
T KOG2774|consen 114 LVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAEL 193 (366)
T ss_pred eeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHH
Confidence 9999876432 222211 789999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCcCCCCC---ccHHHHHHHHcCC---CCCC-CCcceeeHHHHHHHHHHhhcCCCC-
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFFQPILN---FGAEVILNLINGD---QSFA-FPYIFVEIRDVVYAHIRALEVPKA- 182 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~g~---~~~~-~~~~~i~v~D~a~~~~~~~~~~~~- 182 (258)
+-+.+..++|+++.++|.+.++.....++.. ....+-....+|+ .+-| .+..++|.+|+.++++..+..+..
T Consensus 194 ~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~ 273 (366)
T KOG2774|consen 194 LGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQS 273 (366)
T ss_pred HHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHH
Confidence 9888888999999999999998764333211 2233344455777 2334 788999999999999999987653
Q ss_pred --CceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCc----cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 183 --SGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE----EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 183 --~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~----~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
..+|++++-+.|..|+++.+.+.++...+..... ....++..+|.+.+ ++..|+- +++-.-+.-++.-.+++
T Consensus 274 lkrr~ynvt~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~~~~n 353 (366)
T KOG2774|consen 274 LKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIISTVVAVHKSN 353 (366)
T ss_pred hhhheeeeceeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHHHHHHHHhh
Confidence 3389999999999999999999998665544433 45677889999999 8899998 88887777776665543
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-18 Score=138.37 Aligned_cols=181 Identities=19% Similarity=0.166 Sum_probs=126.2
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||+ +.++++|||||+|+||++++++|+++|++|++++|+...... ....+ ...+.++++|+++++++.++++
T Consensus 1 ~~~--l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~ 74 (257)
T PRK07067 1 MMR--LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARL-AALEI---GPAAIAVSLDVTRQDSIDRIVAAA 74 (257)
T ss_pred CCC--CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HHHHh---CCceEEEEccCCCHHHHHHHHHHH
Confidence 554 357899999999999999999999999999999987643221 11111 2357889999999988887665
Q ss_pred -----CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHH
Q 025065 79 -----GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYS 102 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~ 102 (258)
.+|+|||+|+....... ... ..|+
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 154 (257)
T PRK07067 75 VERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYC 154 (257)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhh
Confidence 57999999997532111 111 6799
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCc-------cHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNF-------GAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
.+|...+.+++.++.+ +|+++++++|+.++++........ ..........+.. +...+.+++|+|++
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva~~ 231 (257)
T PRK07067 155 ATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAV---PLGRMGVPDDLTGM 231 (257)
T ss_pred hhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcC---CCCCccCHHHHHHH
Confidence 9999999999888764 689999999999999753211000 0000011111001 45679999999999
Q ss_pred HHHhhcCCC--CCc-eEEEeC
Q 025065 173 HIRALEVPK--ASG-RYLLAG 190 (258)
Q Consensus 173 ~~~~~~~~~--~~~-~~~~~~ 190 (258)
+..++..+. ..| .+++++
T Consensus 232 ~~~l~s~~~~~~~g~~~~v~g 252 (257)
T PRK07067 232 ALFLASADADYIVAQTYNVDG 252 (257)
T ss_pred HHHHhCcccccccCcEEeecC
Confidence 999998653 234 665554
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.1e-18 Score=136.68 Aligned_cols=176 Identities=18% Similarity=0.193 Sum_probs=123.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|+++||||+|+||++++++|+++|++|++++|+...... ....+.....++.++.+|+++.+++.++++ .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAER-VAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 57899999999999999999999999999999987543211 111111112357789999999988776554 5
Q ss_pred CcEEEecCCCCCCCC------CCch--------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS------DNPQ--------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~------~~~~--------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||...... .... +.|+.+|.+.|
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~Y~~sK~a~~ 163 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNFYGLAKVGLN 163 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCccccHHHHHHHH
Confidence 899999999753210 0000 57999999999
Q ss_pred HHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc
Q 025065 110 EAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG 184 (258)
Q Consensus 110 ~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 184 (258)
.+++.+.++. ++++++++||.+.++...... ..........+.+ ...+..++|++++++.++.... ..|
T Consensus 164 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~d~a~~~~~~~~~~~~~~~g 237 (250)
T PRK07774 164 GLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVADMVKGIP----LSRMGTPEDLVGMCLFLLSDEASWITG 237 (250)
T ss_pred HHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHHHHHhcCC----CCCCcCHHHHHHHHHHHhChhhhCcCC
Confidence 9999988764 799999999999877543221 1122333333321 2235689999999999988643 244
Q ss_pred -eEEEe
Q 025065 185 -RYLLA 189 (258)
Q Consensus 185 -~~~~~ 189 (258)
.|+..
T Consensus 238 ~~~~v~ 243 (250)
T PRK07774 238 QIFNVD 243 (250)
T ss_pred CEEEEC
Confidence 56554
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.2e-18 Score=137.52 Aligned_cols=179 Identities=21% Similarity=0.203 Sum_probs=121.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEE-EcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++++|+||||+|+||++++++|+++|++|.++ .|+..+. ......+...+..+.++.+|++|++++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAA-DETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999775 4543221 11112222223467889999999998887665
Q ss_pred -------CCcEEEecCCCCCCCC--CCch----------------------------------------------hhHHH
Q 025065 79 -------GCDGVFHTASPVIFLS--DNPQ----------------------------------------------EWYSL 103 (258)
Q Consensus 79 -------~~d~Vih~a~~~~~~~--~~~~----------------------------------------------~~Y~~ 103 (258)
++|+|||+||...... .... ..|+.
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~ 162 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGL 162 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHh
Confidence 4899999999753311 1110 46999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|.+.|.+++.++.+ .++++++++|+.++++....... .. .+.....+.. ....+.+++|+++++..++..+
T Consensus 163 sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~-~~~~~~~~~~---~~~~~~~~~dva~~~~~l~~~~ 237 (254)
T PRK12746 163 SKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD-DP-EIRNFATNSS---VFGRIGQVEDIADAVAFLASSD 237 (254)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc-Ch-hHHHHHHhcC---CcCCCCCHHHHHHHHHHHcCcc
Confidence 999999998887764 57999999999998875332111 01 1112221211 2235779999999999888764
Q ss_pred CC--Cc-eEEEeC
Q 025065 181 KA--SG-RYLLAG 190 (258)
Q Consensus 181 ~~--~~-~~~~~~ 190 (258)
.. .| .|++++
T Consensus 238 ~~~~~g~~~~i~~ 250 (254)
T PRK12746 238 SRWVTGQIIDVSG 250 (254)
T ss_pred cCCcCCCEEEeCC
Confidence 32 34 665543
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-18 Score=137.97 Aligned_cols=177 Identities=18% Similarity=0.102 Sum_probs=123.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++++||||||+|+||++++++|+++|++|++++|++.+... ....+.....++.++.+|+.+++++.++++
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEA-LAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 456899999999999999999999999999999998654321 112222223568889999999988877665
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
.+|+|||+++....... ... +.|+.+|...
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~ 161 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGV 161 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHH
Confidence 36999999987533110 000 5699999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++++ .+++++++||+.++|+..... ........... + ....+++++|+++++..++.... ..
T Consensus 162 ~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~----~~~~~~~~~~~--~-~~~~~~~~~dva~~~~~~~~~~~~~~~ 234 (246)
T PRK05653 162 IGFTKALALELASRGITVNAVAPGFIDTDMTEGL----PEEVKAEILKE--I-PLGRLGQPEEVANAVAFLASDAASYIT 234 (246)
T ss_pred HHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh----hHHHHHHHHhc--C-CCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence 9988887654 489999999999999864321 11111111111 1 34568899999999999987532 23
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| .|.+++
T Consensus 235 g~~~~~~g 242 (246)
T PRK05653 235 GQVIPVNG 242 (246)
T ss_pred CCEEEeCC
Confidence 4 554443
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.8e-18 Score=139.22 Aligned_cols=178 Identities=18% Similarity=0.161 Sum_probs=121.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++++++|||||+|+||++++++|+++|++|++++|+.+.... ....... .++.++.+|+++++++.++++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAA-TAARLPG--AKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHhc--CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 567899999999999999999999999999999987543221 1111111 156889999999998877664
Q ss_pred CCcEEEecCCCCCCCCC----C------------------------------c-h-----------------hhHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD----N------------------------------P-Q-----------------EWYSLAKT 106 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~----~------------------------------~-~-----------------~~Y~~sK~ 106 (258)
++|+|||+++....... . . . ..|+.+|.
T Consensus 86 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~ 165 (264)
T PRK12829 86 GLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKW 165 (264)
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHH
Confidence 68999999997521100 0 0 0 45999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCc--------cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNF--------GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
..|.+++.++.+ .+++++++|||.++|+........ ........... . ....+++++|+++++..
T Consensus 166 a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~d~a~~~~~ 241 (264)
T PRK12829 166 AVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEK---I-SLGRMVEPEDIAATALF 241 (264)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhc---C-CCCCCCCHHHHHHHHHH
Confidence 999998888765 489999999999999864321100 00000111111 1 23458999999999998
Q ss_pred hhcCC--CCCc-eEEEeC
Q 025065 176 ALEVP--KASG-RYLLAG 190 (258)
Q Consensus 176 ~~~~~--~~~~-~~~~~~ 190 (258)
++... ...| .|.+++
T Consensus 242 l~~~~~~~~~g~~~~i~~ 259 (264)
T PRK12829 242 LASPAARYITGQAISVDG 259 (264)
T ss_pred HcCccccCccCcEEEeCC
Confidence 88653 2244 554443
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-18 Score=136.42 Aligned_cols=171 Identities=19% Similarity=0.194 Sum_probs=121.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++++||||+|+||++|+++|+++|++|++++|+.+.... ....+. ...++.++++|++|++++.++++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAER-VAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWG 80 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHH-HHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999999999999987643221 111111 13458899999999998887664
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+++...... .... +.|+.+|.+.
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~ 160 (252)
T PRK06138 81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAI 160 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHH
Confidence 6899999999753211 0000 6799999999
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCc--cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNF--GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.+++.++.+. +++++++||+.++++........ ....+.....+.. ....|++++|+++++..++.++.
T Consensus 161 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~a~~~~~l~~~~~ 235 (252)
T PRK06138 161 ASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARH---PMNRFGTAEEVAQAALFLASDES 235 (252)
T ss_pred HHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcC---CCCCCcCHHHHHHHHHHHcCchh
Confidence 99999887654 89999999999998853321110 0111111121111 12247899999999999998764
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.4e-18 Score=136.98 Aligned_cols=178 Identities=20% Similarity=0.179 Sum_probs=124.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.++.. .....+...+.++.++++|+++.+++.++++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLA-AAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999998764322 1112222213457889999999998888765
Q ss_pred CCcEEEecCCCCCCCC--CCc-h-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS--DNP-Q-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~--~~~-~-----------------------------------------------~~Y~~sK~~~ 108 (258)
.+|+|||+++...... ..+ . +.|+.+|...
T Consensus 87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~ 166 (255)
T PRK07523 87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAV 166 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHH
Confidence 4799999999753211 111 0 6799999999
Q ss_pred HHHHHHHHH---HcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAK---ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++. .+|++++++||+.+.++....... .......+.... ....+..++|+|+++..++.... ..
T Consensus 167 ~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~ 241 (255)
T PRK07523 167 GNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSAWLEKRT----PAGRWGKVEELVGACVFLASDASSFVN 241 (255)
T ss_pred HHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence 999988876 358999999999999885332111 111111221111 23457789999999999997543 34
Q ss_pred c-eEEEe
Q 025065 184 G-RYLLA 189 (258)
Q Consensus 184 ~-~~~~~ 189 (258)
| .++.+
T Consensus 242 G~~i~~~ 248 (255)
T PRK07523 242 GHVLYVD 248 (255)
T ss_pred CcEEEEC
Confidence 5 44444
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=134.10 Aligned_cols=177 Identities=18% Similarity=0.143 Sum_probs=121.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++++++||||+|+||+++++.|+++|++|+++.|+..+........+.....++.++.+|+++.+++.++++ +
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999998888876432211122222223568889999999998877664 5
Q ss_pred CcEEEecCCCCCCCCCC---ch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSDN---PQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~~---~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+++........ .. ..|+.+|.+.+
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~ 163 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVI 163 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHH
Confidence 89999999874321110 00 56999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC--CCCCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV--PKASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~ 184 (258)
.+++.++++ .+++++++||+.+.++..... ............ ....+.+++|+++++..++.. ....|
T Consensus 164 ~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~~~~~~g 236 (248)
T PRK05557 164 GFTKSLARELASRGITVNAVAPGFIETDMTDAL---PEDVKEAILAQI----PLGRLGQPEEIASAVAFLASDEAAYITG 236 (248)
T ss_pred HHHHHHHHHhhhhCeEEEEEecCccCCcccccc---ChHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCcccCCccc
Confidence 888877653 489999999998866543221 111222222221 233477999999999988866 23345
Q ss_pred -eEEEeC
Q 025065 185 -RYLLAG 190 (258)
Q Consensus 185 -~~~~~~ 190 (258)
.+.+++
T Consensus 237 ~~~~i~~ 243 (248)
T PRK05557 237 QTLHVNG 243 (248)
T ss_pred cEEEecC
Confidence 454443
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.4e-18 Score=138.36 Aligned_cols=173 Identities=23% Similarity=0.233 Sum_probs=121.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++++++||||+|+||++++++|+++|++|++++|+.+... .+. ..++.++.+|+++++++.++++ +
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~-----~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~ 74 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKME-----DLA--SLGVHPLSLDVTDEASIKAAVDTIIAEEGR 74 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-----HHH--hCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999999999998764321 111 1357889999999998887775 6
Q ss_pred CcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||....... ... ..|+.+|...+
T Consensus 75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~ 154 (273)
T PRK06182 75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE 154 (273)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence 8999999997533210 000 46999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCC---------CccHHH----HHHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL---------NFGAEV----ILNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~---------~~~~~~----~~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
.+.+.++.+ +|++++++|||.+.++...... ...... ...+.... ....+..++|+|+++
T Consensus 155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~vA~~i 230 (273)
T PRK06182 155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTY----GSGRLSDPSVIADAI 230 (273)
T ss_pred HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhh----ccccCCCHHHHHHHH
Confidence 988776643 5899999999999887532110 000000 00110000 234578999999999
Q ss_pred HHhhcCCCCCceEEEeC
Q 025065 174 IRALEVPKASGRYLLAG 190 (258)
Q Consensus 174 ~~~~~~~~~~~~~~~~~ 190 (258)
+.++........|+.+.
T Consensus 231 ~~~~~~~~~~~~~~~g~ 247 (273)
T PRK06182 231 SKAVTARRPKTRYAVGF 247 (273)
T ss_pred HHHHhCCCCCceeecCc
Confidence 99998754444665543
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.4e-18 Score=139.35 Aligned_cols=173 Identities=20% Similarity=0.147 Sum_probs=120.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+++|+||||+|+||++++++|.++|++|++++|+...... ..+++++++|++|++++.++++ .+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~ 74 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEVIARAGRI 74 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence 5789999999999999999999999999999997644311 2367899999999999888775 47
Q ss_pred cEEEecCCCCCCCCCCc---h-----------------------------------------------hhHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSDNP---Q-----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 81 d~Vih~a~~~~~~~~~~---~-----------------------------------------------~~Y~~sK~~~e~ 110 (258)
|+|||+||......... . ..|+.+|...+.
T Consensus 75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 154 (270)
T PRK06179 75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEG 154 (270)
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHH
Confidence 99999999853211110 0 579999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCCCCc--cHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcCCCCC
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNF--GAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKAS 183 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~--~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~ 183 (258)
+++.++.+ +|+++++++|+.+.++........ ............ .... ........+|+|+.++.++..+...
T Consensus 155 ~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~ 234 (270)
T PRK06179 155 YSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPWPK 234 (270)
T ss_pred HHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCCCC
Confidence 98887654 599999999999988754322110 000000000000 0000 1223467899999999999876544
Q ss_pred ceEEEe
Q 025065 184 GRYLLA 189 (258)
Q Consensus 184 ~~~~~~ 189 (258)
-.|..+
T Consensus 235 ~~~~~~ 240 (270)
T PRK06179 235 MRYTAG 240 (270)
T ss_pred eeEecC
Confidence 456443
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.2e-18 Score=137.39 Aligned_cols=192 Identities=16% Similarity=0.100 Sum_probs=126.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++|+++||||+|+||++++++|+++|++|++.+|+.+... +...++.....++.++.+|+++++++.++++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~-~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLR-QAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999988754322 1122222223457889999999998887664
Q ss_pred CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||...... .... +.|+.+|..
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 162 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYG 162 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHH
Confidence 4799999999743211 1110 569999998
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHHhhcCC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+.+.+.++.+ .|+++++++|+.+.++......... ......... ...+ ..+++++++|+|++++.++.++
T Consensus 163 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~ 240 (275)
T PRK05876 163 VVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIR--GAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 (275)
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhc--CccccccccccccccccccccCCCHHHHHHHHHHHHHcC
Confidence 66666665544 4899999999999877432210000 000000000 1111 4567899999999999999865
Q ss_pred CCCceEEEeCCCcCHHHHHHHHHH
Q 025065 181 KASGRYLLAGSVAQHSDILKFLRE 204 (258)
Q Consensus 181 ~~~~~~~~~~~~~t~~e~~~~i~~ 204 (258)
. .|++. ......++.+...+
T Consensus 241 ~---~~~~~-~~~~~~~~~~~~~~ 260 (275)
T PRK05876 241 R---LYVLP-HAASRASIRRRFER 260 (275)
T ss_pred C---eEEec-ChhhHHHHHHHHHH
Confidence 3 45443 33444455444444
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-17 Score=136.19 Aligned_cols=180 Identities=14% Similarity=0.109 Sum_probs=124.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|++|||||+|+||++++++|+++|++|++..++.+.... .....+.....++.++.+|+++.+++.++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999887765433221 1112222223467889999999988877654
Q ss_pred -CCcEEEecCCCCCCCC----CCch---------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS----DNPQ---------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~----~~~~---------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|.+.
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~ 212 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAI 212 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHHH
Confidence 5899999999742211 1111 5699999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++.+ .|+++++++||.+.++..... ......+..+.... ....+...+|++.++..++.... ..
T Consensus 213 ~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~~----p~~r~~~p~dva~~~~~l~s~~~~~~~ 287 (300)
T PRK06128 213 VAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSET----PMKRPGQPVEMAPLYVLLASQESSYVT 287 (300)
T ss_pred HHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcCC----CCCCCcCHHHHHHHHHHHhCccccCcc
Confidence 9999988765 589999999999999853321 11112222222221 23347799999999999887543 24
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| .+.+++
T Consensus 288 G~~~~v~g 295 (300)
T PRK06128 288 GEVFGVTG 295 (300)
T ss_pred CcEEeeCC
Confidence 5 555543
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=133.33 Aligned_cols=172 Identities=23% Similarity=0.173 Sum_probs=122.6
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||+. +++|+++||||+|+||++++++|.++|++|++++|+++.... ....+.....++.++++|+++++++.++++
T Consensus 1 ~~~~-~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (250)
T PRK12939 1 MASN-LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARE-LAAALEAAGGRAHAIAADLADPASVQRFFDAA 78 (250)
T ss_pred CCCC-CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4554 567999999999999999999999999999999887543221 112222223468999999999998887763
Q ss_pred -----CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHH
Q 025065 79 -----GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~ 103 (258)
++|+|||+++....... ... ..|+.
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~ 158 (250)
T PRK12939 79 AAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVA 158 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHH
Confidence 58999999997532110 000 46999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+++.++.+ .++++++++||.+.++....... ..+......+. ....+++++|+++++..++..+
T Consensus 159 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~ 232 (250)
T PRK12939 159 SKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLKGR----ALERLQVPDDVAGAVLFLLSDA 232 (250)
T ss_pred HHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCcc
Confidence 999999999887654 48999999999987765322111 11222222222 3456889999999999999764
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=133.12 Aligned_cols=175 Identities=20% Similarity=0.206 Sum_probs=123.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CCc
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCD 81 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d 81 (258)
.+++++++||||+|+||+++++.|.++|++|++++|+.+.... +.. ..+..++.+|+++.+.+.++++ ++|
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~d 79 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDR--LAG----ETGCEPLRLDVGDDAAIRAALAAAGAFD 79 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH--HHH----HhCCeEEEecCCCHHHHHHHHHHhCCCC
Confidence 3567899999999999999999999999999999987543211 111 0135678999999988888775 489
Q ss_pred EEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHHHHH
Q 025065 82 GVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 82 ~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~~e~ 110 (258)
+|||+++...... .... ..|+.+|...|.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~ 159 (245)
T PRK07060 80 GLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDA 159 (245)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHH
Confidence 9999999753211 0000 579999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc-
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG- 184 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 184 (258)
+++.++.+ .+++++.+||+.++++........ ......+.... ....+++++|+++++..++..+. ..|
T Consensus 160 ~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~d~a~~~~~l~~~~~~~~~G~ 234 (245)
T PRK07060 160 ITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-PQKSGPMLAAI----PLGRFAEVDDVAAPILFLLSDAASMVSGV 234 (245)
T ss_pred HHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC-HHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCcccCCccCc
Confidence 99988765 479999999999998853321111 11111111111 34568999999999999998653 245
Q ss_pred eEEEeC
Q 025065 185 RYLLAG 190 (258)
Q Consensus 185 ~~~~~~ 190 (258)
.+.+.+
T Consensus 235 ~~~~~~ 240 (245)
T PRK07060 235 SLPVDG 240 (245)
T ss_pred EEeECC
Confidence 344443
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=134.36 Aligned_cols=176 Identities=17% Similarity=0.109 Sum_probs=121.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC-------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++||||||+|+||++++++|.++|++|++++|+...... ....+.. ....+.++.+|+++.+++.+++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAAN-VAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999987543321 1111111 01358899999999988776654
Q ss_pred CCcEEEecCCCCCCCC--C-Cch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS--D-NPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~--~-~~~------------------------------------------------~~Y~~sK~~ 107 (258)
.+|+|||+||...... . ... +.|+.+|.+
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa 160 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG 160 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence 5799999998753211 1 110 589999999
Q ss_pred HHHHHHHHHH---HcCCcEEEEcCCccccCCcCCCCCccHHHH-----------HHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 108 AEEAAWKFAK---ENGIDLVAIHPGTVIGPFFQPILNFGAEVI-----------LNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 108 ~e~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~-----------~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
.+.+++.++. .+|+++.++|||.++++..... ...... .....+. ....+++++|++.++
T Consensus 161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dv~~~~ 234 (259)
T PRK12384 161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQS--LLPQYAKKLGIKPDEVEQYYIDKV----PLKRGCDYQDVLNML 234 (259)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhh--hhHHHHHhcCCChHHHHHHHHHhC----cccCCCCHHHHHHHH
Confidence 9999888875 4689999999999887643221 111110 1111111 456789999999999
Q ss_pred HHhhcCCC--CCc-eEEEeC
Q 025065 174 IRALEVPK--ASG-RYLLAG 190 (258)
Q Consensus 174 ~~~~~~~~--~~~-~~~~~~ 190 (258)
..++.+.. ..| .|++++
T Consensus 235 ~~l~~~~~~~~~G~~~~v~~ 254 (259)
T PRK12384 235 LFYASPKASYCTGQSINVTG 254 (259)
T ss_pred HHHcCcccccccCceEEEcC
Confidence 99887543 245 565554
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=133.03 Aligned_cols=167 Identities=20% Similarity=0.195 Sum_probs=119.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++||||||+|+||++++++|+++|++|++++|++.+... ....+. .....++.+|+++.+++.++++
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQ-TLPGVP--ADALRIGGIDLVDPQAARRAVDEVNRQFG 81 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHH-HHHHHh--hcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 567899999999999999999999999999999997644321 111111 1356788899999988877665
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+++...... .... ..|+.+|...
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~ 161 (239)
T PRK12828 82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGV 161 (239)
T ss_pred CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHH
Confidence 5899999998642110 0000 4699999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++++ .++++.++||+.++++....... .+ ....|++++|+++++..++.+.. ..
T Consensus 162 ~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~----------~~-----~~~~~~~~~dva~~~~~~l~~~~~~~~ 226 (239)
T PRK12828 162 ARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP----------DA-----DFSRWVTPEQIAAVIAFLLSDEAQAIT 226 (239)
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC----------ch-----hhhcCCCHHHHHHHHHHHhCccccccc
Confidence 8888777654 58999999999999874221100 00 22347899999999999998653 34
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| .+.+.+
T Consensus 227 g~~~~~~g 234 (239)
T PRK12828 227 GASIPVDG 234 (239)
T ss_pred ceEEEecC
Confidence 5 444443
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=135.55 Aligned_cols=169 Identities=18% Similarity=0.148 Sum_probs=118.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+||||||+|+||++++++|+++|++|++++|++.... ....++.....++.++.+|+++.+++.++++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLD-EVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 35689999999999999999999999999999998764321 1112221113467899999999988876653
Q ss_pred CCcEEEecCCCCCCC----CCCch----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFL----SDNPQ----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~----~~~~~----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+|+..... ..... ..|+.+|...
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~ 161 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGAL 161 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHH
Confidence 579999999874321 11111 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
+.+++.++.+ .+++++++|||.++++....... ............. ....+.+++|+++++..++
T Consensus 162 ~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~a~~~l~ 237 (258)
T PRK07890 162 LAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS----DLKRLPTDDEVASAVLFLA 237 (258)
T ss_pred HHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC----CccccCCHHHHHHHHHHHc
Confidence 9999988865 48999999999999985322100 0011111111111 2234778999999999988
Q ss_pred cC
Q 025065 178 EV 179 (258)
Q Consensus 178 ~~ 179 (258)
..
T Consensus 238 ~~ 239 (258)
T PRK07890 238 SD 239 (258)
T ss_pred CH
Confidence 75
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3e-17 Score=132.03 Aligned_cols=176 Identities=16% Similarity=0.124 Sum_probs=119.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
++++|||||+|+||++++++|.++|++|+...++...........+...+..+.++.+|+++.+++.++++ .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 36799999999999999999999999988776543221111112222223457889999999988887765 57
Q ss_pred cEEEecCCCCCCC--CCCch-----------------------------------------------------hhHHHHH
Q 025065 81 DGVFHTASPVIFL--SDNPQ-----------------------------------------------------EWYSLAK 105 (258)
Q Consensus 81 d~Vih~a~~~~~~--~~~~~-----------------------------------------------------~~Y~~sK 105 (258)
|+|||+|+..... ..+.. ..|+.+|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK 161 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence 9999999975321 11100 2499999
Q ss_pred HHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-
Q 025065 106 TLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK- 181 (258)
Q Consensus 106 ~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~- 181 (258)
...|.+++.++.+. |++++++||+.++|+...... .+..+... .+.. | ..-+.+++|+++++..++....
T Consensus 162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~--~~~~~~~~-~~~~--p-~~~~~~~~d~a~~~~~l~~~~~~ 235 (248)
T PRK06123 162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG--EPGRVDRV-KAGI--P-MGRGGTAEEVARAILWLLSDEAS 235 (248)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC--CHHHHHHH-HhcC--C-CCCCcCHHHHHHHHHHHhCcccc
Confidence 99999999887764 899999999999998533211 12222222 2221 1 1123588999999999887642
Q ss_pred -CCc-eEEEe
Q 025065 182 -ASG-RYLLA 189 (258)
Q Consensus 182 -~~~-~~~~~ 189 (258)
..| .|++.
T Consensus 236 ~~~g~~~~~~ 245 (248)
T PRK06123 236 YTTGTFIDVS 245 (248)
T ss_pred CccCCEEeec
Confidence 344 55444
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5e-17 Score=133.72 Aligned_cols=179 Identities=16% Similarity=0.142 Sum_probs=125.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...........+.....++.++.+|+++.+.+.++++
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4568999999999999999999999999999998875432111111221113467889999999988877664
Q ss_pred CCcEEEecCCCCCCC--CCCc--h---------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFL--SDNP--Q---------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~--~~~~--~---------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+|+..... ..+. . ..|+.+|.+.+
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~ 203 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIH 203 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHHH
Confidence 579999999974321 1111 0 57999999999
Q ss_pred HHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc
Q 025065 110 EAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG 184 (258)
Q Consensus 110 ~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 184 (258)
.+++.++.+. |++++.++||.++++...... ............ ....+.+++|+|++++.++.... ..|
T Consensus 204 ~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~dva~~~~~ll~~~~~~~~G 277 (290)
T PRK06701 204 AFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF--DEEKVSQFGSNT----PMQRPGQPEELAPAYVFLASPDSSYITG 277 (290)
T ss_pred HHHHHHHHHhhhcCeEEEEEecCCCCCccccccc--CHHHHHHHHhcC----CcCCCcCHHHHHHHHHHHcCcccCCccC
Confidence 9999988764 899999999999987533211 111122222111 33458899999999999988643 355
Q ss_pred -eEEEeC
Q 025065 185 -RYLLAG 190 (258)
Q Consensus 185 -~~~~~~ 190 (258)
.+.+.+
T Consensus 278 ~~i~idg 284 (290)
T PRK06701 278 QMLHVNG 284 (290)
T ss_pred cEEEeCC
Confidence 444443
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6e-17 Score=130.24 Aligned_cols=166 Identities=17% Similarity=0.097 Sum_probs=117.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc---hhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT---EHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
+++|+|+||||+|+||++++++|+++|++|++++|....... ...........++.++.+|+++++.+.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999999999998875433221 1111222223568899999999998887763
Q ss_pred ---CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHH
Q 025065 79 ---GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~s 104 (258)
++|+|||++|...... .... ..|+.+
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s 163 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAAS 163 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHH
Confidence 5899999999754211 0000 579999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
|...+.+++.++.+ .+++++++|||.++++...... .. ....... ....+..++|+++++..++...
T Consensus 164 K~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--~~---~~~~~~~----~~~~~~~~~~va~~~~~l~~~~ 233 (249)
T PRK12827 164 KAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--PT---EHLLNPV----PVQRLGEPDEVAALVAFLVSDA 233 (249)
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--hH---HHHHhhC----CCcCCcCHHHHHHHHHHHcCcc
Confidence 99999988887765 4899999999999988543321 10 1111111 1123558899999999988654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=131.85 Aligned_cols=183 Identities=20% Similarity=0.210 Sum_probs=122.4
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc---hhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT---EHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++++...... ...+.+...+.++.++++|+++++++.+++.
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 84 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK 84 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 3457899999999999999999999999998877765432211 1111221123468889999999998887664
Q ss_pred ----CCcEEEecCCCCCCC---CCCch---------------------------------------------hhHHHHHH
Q 025065 79 ----GCDGVFHTASPVIFL---SDNPQ---------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~---~~~~~---------------------------------------------~~Y~~sK~ 106 (258)
++|++||+||..... ..... +.|+.+|.
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~sK~ 164 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKA 164 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhhHH
Confidence 589999999974221 11110 56999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcCCC
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.|.+++.++++. |+++++++||.+.++...+..... .... .... ...+ ....+.+++|++.++..++....
T Consensus 165 a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 241 (257)
T PRK12744 165 PVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAE--AVAY-HKTAAALSPFSKTGLTDIEDIVPFIRFLVTDGW 241 (257)
T ss_pred HHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccc--hhhc-ccccccccccccCCCCCHHHHHHHHHHhhcccc
Confidence 9999999998774 699999999999876432211100 0000 0000 1111 22358899999999999998532
Q ss_pred -CCc-eEEEeC
Q 025065 182 -ASG-RYLLAG 190 (258)
Q Consensus 182 -~~~-~~~~~~ 190 (258)
..| .++..+
T Consensus 242 ~~~g~~~~~~g 252 (257)
T PRK12744 242 WITGQTILING 252 (257)
T ss_pred eeecceEeecC
Confidence 234 454443
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.9e-17 Score=130.90 Aligned_cols=179 Identities=16% Similarity=0.151 Sum_probs=122.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
+++++|||||+|+||++++++|+++|++|++++|+.+.... ....+.....++.++.+|+++.++++++++ +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEK-VAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999999999999887643221 111111123468899999999988887764 5
Q ss_pred CcEEEecCCCCCCC---CCCch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFL---SDNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~---~~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+++..... ..... ..|+.+|.+.+
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~ 160 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLV 160 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHH
Confidence 89999999864221 11110 57999999999
Q ss_pred HHHHHHHHHc---CCcEEEEcCCccccCCcCCCC---CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--
Q 025065 110 EAAWKFAKEN---GIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-- 181 (258)
Q Consensus 110 ~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~-- 181 (258)
.+++.++.+. +++++++||+.++++...... .........+.... ....+...+|+|+++..++..+.
T Consensus 161 ~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~ 236 (250)
T TIGR03206 161 AFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAI----PLGRLGQPDDLPGAILFFSSDDASF 236 (250)
T ss_pred HHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcC----CccCCcCHHHHHHHHHHHcCcccCC
Confidence 9988887663 899999999999987432110 01111222222221 12235678999999999887643
Q ss_pred CCc-eEEEeC
Q 025065 182 ASG-RYLLAG 190 (258)
Q Consensus 182 ~~~-~~~~~~ 190 (258)
..| .+..++
T Consensus 237 ~~g~~~~~~~ 246 (250)
T TIGR03206 237 ITGQVLSVSG 246 (250)
T ss_pred CcCcEEEeCC
Confidence 245 454443
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.6e-17 Score=130.05 Aligned_cols=173 Identities=18% Similarity=0.141 Sum_probs=121.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+........+. ....++.++.+|+++++++.++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE---ALGRRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH---hcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4679999999999999999999999999999999865221112222 123468899999999988876553
Q ss_pred CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+|+....... ... ..|+.+|.+
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa 159 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHG 159 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHH
Confidence 58999999998532111 000 569999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--C
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--A 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 182 (258)
.+.+++.++++ +|+++++++||.+..+....... .......... . . ....|..++|+|+++..++.... .
T Consensus 160 ~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~-~--~-~~~~~~~~~dva~~~~~l~s~~~~~~ 234 (248)
T TIGR01832 160 VAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-DEDRNAAILE-R--I-PAGRWGTPDDIGGPAVFLASSASDYV 234 (248)
T ss_pred HHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-ChHHHHHHHh-c--C-CCCCCcCHHHHHHHHHHHcCccccCc
Confidence 99999998877 38999999999998774321111 1111111111 1 1 23468899999999999997543 3
Q ss_pred CceE
Q 025065 183 SGRY 186 (258)
Q Consensus 183 ~~~~ 186 (258)
.|.+
T Consensus 235 ~G~~ 238 (248)
T TIGR01832 235 NGYT 238 (248)
T ss_pred CCcE
Confidence 4644
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.8e-17 Score=130.98 Aligned_cols=179 Identities=19% Similarity=0.168 Sum_probs=123.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++++++|||||+|+||++++++|+++|++|++++|++.+... ....+.. ..++.++++|+.+++++..+++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAER-VAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFG 80 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 357899999999999999999999999999999998754321 1111111 2457899999999999987764
Q ss_pred CCcEEEecCCCCCCCC----CCch-----------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS----DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~----~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+++...... .... ..|+.+|..
T Consensus 81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~ 160 (251)
T PRK07231 81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGA 160 (251)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHH
Confidence 4799999999743211 0111 679999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC-ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-- 181 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~-- 181 (258)
.+.+++.++.+ .+++++.++||.+.++....... ........+..+. ....+++++|+|++++.++..+.
T Consensus 161 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~ 236 (251)
T PRK07231 161 VITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI----PLGRLGTPEDIANAALFLASDEASW 236 (251)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC----CCCCCcCHHHHHHHHHHHhCccccC
Confidence 99988888765 38999999999997664222111 0011111222221 34457899999999999997653
Q ss_pred CCceE-EEeC
Q 025065 182 ASGRY-LLAG 190 (258)
Q Consensus 182 ~~~~~-~~~~ 190 (258)
..|.+ .+.+
T Consensus 237 ~~g~~~~~~g 246 (251)
T PRK07231 237 ITGVTLVVDG 246 (251)
T ss_pred CCCCeEEECC
Confidence 34544 4443
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-17 Score=143.62 Aligned_cols=187 Identities=19% Similarity=0.176 Sum_probs=121.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhcccc----C--cCCcEEEEEccCCCcccHHHHh
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELD----G--ATERLHLFKANLLEEGSFDSAV 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~----~--~~~~~~~~~~Dl~~~~~~~~~~ 77 (258)
+++++||||||+|+||++++++|+++|++|++++|+...... ..+.... . ...++.++.+|+.+.+++.+.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 357899999999999999999999999999999997654321 1111100 0 0135889999999999999999
Q ss_pred CCCcEEEecCCCCCCCCCCch----------------------------------------------hhHHHHHHHHHHH
Q 025065 78 DGCDGVFHTASPVIFLSDNPQ----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 78 ~~~d~Vih~a~~~~~~~~~~~----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
.++|+|||++|.......+.. ..|...|..+|+.
T Consensus 158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~ 237 (576)
T PLN03209 158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEA 237 (576)
T ss_pred cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHH
Confidence 999999999987432111100 1133455566655
Q ss_pred HHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-CCc-eE-EE
Q 025065 112 AWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-ASG-RY-LL 188 (258)
Q Consensus 112 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~~-~~ 188 (258)
+ .+.|++++++|||.++++.+...... .+.. ..+.. .....+...|+|++++.++.++. ..+ +| ++
T Consensus 238 L----~~sGIrvTIVRPG~L~tp~d~~~~t~---~v~~-~~~d~---~~gr~isreDVA~vVvfLasd~~as~~kvvevi 306 (576)
T PLN03209 238 L----IASGLPYTIVRPGGMERPTDAYKETH---NLTL-SEEDT---LFGGQVSNLQVAELMACMAKNRRLSYCKVVEVI 306 (576)
T ss_pred H----HHcCCCEEEEECCeecCCcccccccc---ceee-ccccc---cCCCccCHHHHHHHHHHHHcCchhccceEEEEE
Confidence 3 45699999999999988744311000 0000 01111 12236889999999999998765 334 67 66
Q ss_pred eCCCcCHHHHHHHHH
Q 025065 189 AGSVAQHSDILKFLR 203 (258)
Q Consensus 189 ~~~~~t~~e~~~~i~ 203 (258)
++.......+.+.+.
T Consensus 307 ~~~~~p~~~~~~~~~ 321 (576)
T PLN03209 307 AETTAPLTPMEELLA 321 (576)
T ss_pred eCCCCCCCCHHHHHH
Confidence 654333344444443
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.9e-17 Score=129.57 Aligned_cols=164 Identities=18% Similarity=0.194 Sum_probs=116.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CCcEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDGVF 84 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~Vi 84 (258)
+|++|||||+|+||++++++|+++ ++|++++|+..+.. .+.. ...+++++++|+++++++.++++ ++|+||
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~--~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLD--ELAA---ELPGATPFPVDLTDPEAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHH--HHHH---HhccceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 578999999999999999999999 99999999754321 1111 11357889999999999998886 589999
Q ss_pred ecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHHHHHHHH
Q 025065 85 HTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAEEAAWKF 115 (258)
Q Consensus 85 h~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e~~~~~~ 115 (258)
|+++...... ..+. ..|+.+|...+.+++.+
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~ 156 (227)
T PRK08219 77 HNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADAL 156 (227)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHH
Confidence 9999753211 0000 67999999999988877
Q ss_pred HHH-cC-CcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCceEEE
Q 025065 116 AKE-NG-IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLL 188 (258)
Q Consensus 116 ~~~-~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~ 188 (258)
+.+ .+ +++..++|+.+.++.... +.. ..+.. . ....+++++|++++++.+++++....++.+
T Consensus 157 ~~~~~~~i~~~~i~pg~~~~~~~~~--------~~~-~~~~~-~-~~~~~~~~~dva~~~~~~l~~~~~~~~~~~ 220 (227)
T PRK08219 157 REEEPGNVRVTSVHPGRTDTDMQRG--------LVA-QEGGE-Y-DPERYLRPETVAKAVRFAVDAPPDAHITEV 220 (227)
T ss_pred HHHhcCCceEEEEecCCccchHhhh--------hhh-hhccc-c-CCCCCCCHHHHHHHHHHHHcCCCCCccceE
Confidence 654 34 899999998776542111 000 01110 1 234689999999999999988654345533
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-18 Score=137.76 Aligned_cols=184 Identities=27% Similarity=0.356 Sum_probs=127.8
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCCCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASPV 90 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~~~ 90 (258)
|+|+||||.+|+.+++.|++.+++|+++.|+.+......++. .+++.+.+|+.+++.+.++++++|+||.+.+..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-----~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-----LGAEVVEADYDDPESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-----TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-----ccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence 799999999999999999999999999999874332233332 467889999999999999999999999888864
Q ss_pred CCCCCCch---------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcC
Q 025065 91 IFLSDNPQ---------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 137 (258)
Q Consensus 91 ~~~~~~~~---------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~ 137 (258)
........ ...-..|...|+. .++.+++++++||+..+.+...
T Consensus 76 ~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~----l~~~~i~~t~i~~g~f~e~~~~ 151 (233)
T PF05368_consen 76 HPSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEY----LRESGIPYTIIRPGFFMENLLP 151 (233)
T ss_dssp CCCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHH----HHHCTSEBEEEEE-EEHHHHHT
T ss_pred hhhhhhhhhhHHHhhhccccceEEEEEecccccccccccccchhhhhhhhhhhh----hhhccccceeccccchhhhhhh
Confidence 31111101 1122345555544 5666999999999988765432
Q ss_pred CCCCccHHHHHHHHcCC--CCCC----CCccee-eHHHHHHHHHHhhcCCCCC--c-eEEEeCCCcCHHHHHHHHHHhCC
Q 025065 138 PILNFGAEVILNLINGD--QSFA----FPYIFV-EIRDVVYAHIRALEVPKAS--G-RYLLAGSVAQHSDILKFLREHYP 207 (258)
Q Consensus 138 ~~~~~~~~~~~~~~~g~--~~~~----~~~~~i-~v~D~a~~~~~~~~~~~~~--~-~~~~~~~~~t~~e~~~~i~~~~~ 207 (258)
.... ........ ..+. ....++ ..+|+++++..++.++... + .+.++++.+|..|+++.+.+.+|
T Consensus 152 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~~~~t~~eia~~~s~~~G 226 (233)
T PF05368_consen 152 PFAP-----VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAGETLTYNEIAAILSKVLG 226 (233)
T ss_dssp TTHH-----TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGGGEEEHHHHHHHHHHHHT
T ss_pred hhcc-----cccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCCCCCCHHHHHHHHHHHHC
Confidence 1100 00011111 1111 345665 9999999999999998765 3 44667899999999999999987
Q ss_pred C
Q 025065 208 T 208 (258)
Q Consensus 208 ~ 208 (258)
.
T Consensus 227 ~ 227 (233)
T PF05368_consen 227 K 227 (233)
T ss_dssp S
T ss_pred C
Confidence 5
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.2e-17 Score=131.19 Aligned_cols=167 Identities=20% Similarity=0.181 Sum_probs=116.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++++||||+|+||++++++|+++|++|++++|+..... ....++ +.++.++++|+++.+++.++++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLE-AARAEL---GESALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHH-HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999988643221 111111 2457889999999887665543
Q ss_pred CCcEEEecCCCCCCCCC---Cch---------------------------------------------hhHHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ---------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~---------------------------------------------~~Y~~sK~~~e~ 110 (258)
++|+|||+|+....... ... +.|+.+|...|.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~ 159 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLS 159 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHH
Confidence 58999999997532111 111 689999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCC---CCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+++.++.+ .|++++++||+.++++..... ..........+..+.+ ..-+..++|+++++..++..+
T Consensus 160 ~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~va~~~~~l~~~~ 231 (249)
T PRK06500 160 LAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVP----LGRFGTPEEIAKAVLYLASDE 231 (249)
T ss_pred HHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCC----CCCCcCHHHHHHHHHHHcCcc
Confidence 99888765 389999999999998742210 0111112222222211 122568999999999988753
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=130.45 Aligned_cols=182 Identities=24% Similarity=0.261 Sum_probs=141.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|+|||||||||+|++++++|+++|++|++..|+++..... . .++++..+|+.++..+...+++.|.++++.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~--~------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~ 72 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL--A------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISG 72 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhh--c------CCcEEEEeccCCHhHHHHHhccccEEEEEec
Confidence 4799999999999999999999999999999988665321 1 4689999999999999999999999999988
Q ss_pred CCCCCCC---Cch-------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccC
Q 025065 89 PVIFLSD---NPQ-------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 89 ~~~~~~~---~~~-------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~ 134 (258)
... ... ... ..|..+|..+|..+ ...|++++++|+..+|..
T Consensus 73 ~~~-~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~l----~~sg~~~t~lr~~~~~~~ 147 (275)
T COG0702 73 LLD-GSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASPSALARAKAAVEAAL----RSSGIPYTTLRRAAFYLG 147 (275)
T ss_pred ccc-cccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCCccHHHHHHHHHHHHH----HhcCCCeEEEecCeeeec
Confidence 643 211 000 67999999999984 456999999998887765
Q ss_pred CcCCCCCccHHHHHHHHcCCCCCC---CCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEeCCCcCHHHHHHHHHHhCCCC
Q 025065 135 FFQPILNFGAEVILNLINGDQSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLAGSVAQHSDILKFLREHYPTL 209 (258)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~~~~~t~~e~~~~i~~~~~~~ 209 (258)
..... .......+.+..+ ...+++.++|++.++..++..+...+ .| +.+++..+..++++.+.+..+..
T Consensus 148 ~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~ 221 (275)
T COG0702 148 AGAAF------IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGRP 221 (275)
T ss_pred cchhH------HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCCc
Confidence 43321 1122223333333 55899999999999999999886544 77 56678999999999999998753
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-16 Score=126.47 Aligned_cols=167 Identities=19% Similarity=0.139 Sum_probs=117.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------GC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~ 80 (258)
.+|+++||||+|+||++++++|.++|++|++++|+..... ..+++.+|+++.+++.++++ ++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~------------~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 69 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF------------PGELFACDLADIEQTAATLAQINEIHPV 69 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc------------CceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999998765411 12578899999988877665 58
Q ss_pred cEEEecCCCCCCCCCC---ch----------------------------------------------hhHHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSDN---PQ----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 81 d~Vih~a~~~~~~~~~---~~----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
|+|||+++........ .. ..|+.+|...|.+
T Consensus 70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~Y~~sK~a~~~~ 149 (234)
T PRK07577 70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALDRTSYSAAKSALVGC 149 (234)
T ss_pred cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCCchHHHHHHHHHHHH
Confidence 9999999975332110 00 6799999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc-e
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-R 185 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~ 185 (258)
++.++.+ +|++++++|||.+.++.................... ....+..++|+|.+++.++..+. ..| .
T Consensus 150 ~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~ 225 (234)
T PRK07577 150 TRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASI----PMRRLGTPEEVAAAIAFLLSDDAGFITGQV 225 (234)
T ss_pred HHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcC----CCCCCcCHHHHHHHHHHHhCcccCCccceE
Confidence 8887654 489999999999987643211111111111222211 12235588999999999997653 345 3
Q ss_pred EEEe
Q 025065 186 YLLA 189 (258)
Q Consensus 186 ~~~~ 189 (258)
+.++
T Consensus 226 ~~~~ 229 (234)
T PRK07577 226 LGVD 229 (234)
T ss_pred EEec
Confidence 3444
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.5e-17 Score=129.40 Aligned_cols=170 Identities=18% Similarity=0.202 Sum_probs=121.5
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||.. +++++++||||+|+||++++++|+++|++|++++|+..+... ....+.....++.++.+|+++++++.++++
T Consensus 1 ~~~~-~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (239)
T PRK07666 1 MAQS-LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKA-VAEEVEAYGVKVVIATADVSDYEEVTAAIEQL 78 (239)
T ss_pred CCcc-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHhCCeEEEEECCCCCHHHHHHHHHHH
Confidence 5543 456899999999999999999999999999999987643221 111222223468899999999998887775
Q ss_pred -----CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHH
Q 025065 79 -----GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~ 103 (258)
++|+|||+++...... .... ..|+.
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 158 (239)
T PRK07666 79 KNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSA 158 (239)
T ss_pred HHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHH
Confidence 6899999998743211 1100 56999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|.+.+.+++.++.+ .|++++++|||.+.++..... ....+ ....++..+|+|+.+..++..+
T Consensus 159 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---------~~~~~-----~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 159 SKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---------GLTDG-----NPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---------ccccc-----CCCCCCCHHHHHHHHHHHHhCC
Confidence 999999888877654 589999999999987642211 00011 1224678999999999999875
Q ss_pred CCCceEEE
Q 025065 181 KASGRYLL 188 (258)
Q Consensus 181 ~~~~~~~~ 188 (258)
.++|+.
T Consensus 225 --~~~~~~ 230 (239)
T PRK07666 225 --KRTFIK 230 (239)
T ss_pred --CceEEE
Confidence 345543
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.8e-17 Score=132.00 Aligned_cols=181 Identities=18% Similarity=0.146 Sum_probs=122.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..... .....+. ...++.++++|++|++++.++++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQ-NVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKFG 93 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999988653321 1111121 12468899999999998887765
Q ss_pred CCcEEEecCCCCCCCC-----CCch-----------------------------------------------hhHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS-----DNPQ-----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~-----~~~~-----------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||...... .... ..|+.+|.
T Consensus 94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~ 173 (280)
T PLN02253 94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKH 173 (280)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHH
Confidence 5899999999753211 0110 57999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCc---cHHHHH---HHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNF---GAEVIL---NLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~---~~~~~~---~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
+.|.+++.++.+. ++++.+++|+.+.++......+. ....+. ........ .....++++|++++++.++
T Consensus 174 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~dva~~~~~l~ 251 (280)
T PLN02253 174 AVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN--LKGVELTVDDVANAVLFLA 251 (280)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC--CcCCCCCHHHHHHHHHhhc
Confidence 9999999888763 89999999999987642211100 001111 11111100 1123578999999999998
Q ss_pred cCCC--CCc-eEEEeC
Q 025065 178 EVPK--ASG-RYLLAG 190 (258)
Q Consensus 178 ~~~~--~~~-~~~~~~ 190 (258)
.... ..| .+.+++
T Consensus 252 s~~~~~i~G~~i~vdg 267 (280)
T PLN02253 252 SDEARYISGLNLMIDG 267 (280)
T ss_pred CcccccccCcEEEECC
Confidence 7542 345 444443
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-16 Score=128.65 Aligned_cols=168 Identities=21% Similarity=0.186 Sum_probs=117.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++++++||||+|+||++++++|.++|++|+++.|+..+........+.....++.++.+|+++++++.++++ +
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999998887755332112222222224568899999999988887765 5
Q ss_pred CcEEEecCCCCCCCC---CCch---------------------------------------------hhHHHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ---------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~---------------------------------------------~~Y~~sK~~~e~~ 111 (258)
+|+|||+||...... .... +.|+.+|...+.+
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 163 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGL 163 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHHH
Confidence 899999999753211 0000 5799999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
++.++.+ .++.+++++||.+-++..... ........+.... ....+.+++|+++++..++..+
T Consensus 164 ~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~d~a~~~~~l~~~~ 229 (245)
T PRK12937 164 VHVLANELRGRGITVNAVAPGPVATELFFNG--KSAEQIDQLAGLA----PLERLGTPEEIAAAVAFLAGPD 229 (245)
T ss_pred HHHHHHHhhhcCeEEEEEEeCCccCchhccc--CCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCcc
Confidence 9888765 479999999998876642111 1122233322221 1223668899999999998764
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-16 Score=127.57 Aligned_cols=166 Identities=16% Similarity=0.119 Sum_probs=112.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d 81 (258)
++++||||+|+||++++++|+++|++|+++.++......+....+.....++..+++|++|++++.++++ ++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 5799999999999999999999999998754332222112222222223457889999999998887665 368
Q ss_pred EEEecCCCCCCC--CC-Cc------------------------------------h----------------hhHHHHHH
Q 025065 82 GVFHTASPVIFL--SD-NP------------------------------------Q----------------EWYSLAKT 106 (258)
Q Consensus 82 ~Vih~a~~~~~~--~~-~~------------------------------------~----------------~~Y~~sK~ 106 (258)
+|||+++..... .. .. . ..|+.+|.
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~ 161 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG 161 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence 999999964210 00 00 0 35999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
..+.+++.++.+ .+++++++||+.+||+...... ............+ ..-..+++|+++++..++..+
T Consensus 162 ~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~dva~~~~~~~~~~ 232 (247)
T PRK09730 162 AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG--EPGRVDRVKSNIP----MQRGGQPEEVAQAIVWLLSDK 232 (247)
T ss_pred HHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC--CHHHHHHHHhcCC----CCCCcCHHHHHHHHHhhcChh
Confidence 999998877654 4899999999999998643221 1222222222211 111348999999999988754
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.7e-17 Score=132.48 Aligned_cols=174 Identities=9% Similarity=0.047 Sum_probs=117.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|+++++|||||+|+||++++++|+++|++|++++|+.+... ....++...+.++.++.+|++|.+++.++++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALD-RAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999999999999998654322 1112221113467889999999998888775
Q ss_pred CCcEEEecCCCCCCCC--C-Cc-------------------------------------h----------------hhHH
Q 025065 79 GCDGVFHTASPVIFLS--D-NP-------------------------------------Q----------------EWYS 102 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~--~-~~-------------------------------------~----------------~~Y~ 102 (258)
.+|+|||+||...... . .. . +.|+
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 162 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYN 162 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchH
Confidence 4799999999853211 0 00 0 5699
Q ss_pred HHHHHHHHHHHHHHHHc-----CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHH
Q 025065 103 LAKTLAEEAAWKFAKEN-----GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYA 172 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~~-----~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~ 172 (258)
.+|...+.+++.++.+. ++++..+.|+.+..+.... ..+. ...+ +.++++|++|.+.+
T Consensus 163 ~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T PRK06194 163 VSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS------------ERNRPADLANTAPPTRSQLIAQAMSQK 230 (287)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc------------cccCchhcccCccccchhhHHHHHHHh
Confidence 99999999999887764 3666777777665442111 1111 1111 56677777777766
Q ss_pred HHHhhcCCCCCceEEEeCCCcCHHHHHHHHHHhC
Q 025065 173 HIRALEVPKASGRYLLAGSVAQHSDILKFLREHY 206 (258)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~t~~e~~~~i~~~~ 206 (258)
+.... .++..|+++.+.+.+
T Consensus 231 ~~~~~--------------~~s~~dva~~i~~~~ 250 (287)
T PRK06194 231 AVGSG--------------KVTAEEVAQLVFDAI 250 (287)
T ss_pred hhhcc--------------CCCHHHHHHHHHHHH
Confidence 43221 157777777776654
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-16 Score=126.04 Aligned_cols=125 Identities=26% Similarity=0.310 Sum_probs=98.7
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
||+. .+++|+||||+|+||++++++|+++|+ +|++++|+..+... ...++.++.+|+.+++.+.++++
T Consensus 1 ~~~~--~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~ 70 (238)
T PRK08264 1 MMDI--KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPASVAAAAEA 70 (238)
T ss_pred CCCC--CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHHHHHHHHHh
Confidence 4543 568999999999999999999999998 99999987644311 13468899999999999888776
Q ss_pred --CCcEEEecCCCC-CCCC---CCch-----------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPV-IFLS---DNPQ-----------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~-~~~~---~~~~-----------------------------------------------~~Y~~sK 105 (258)
.+|+|||+++.. .... .... +.|+.+|
T Consensus 71 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK 150 (238)
T PRK08264 71 ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASK 150 (238)
T ss_pred cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHH
Confidence 489999999982 2111 1000 5799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCC
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 135 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~ 135 (258)
..+|.+.+.++.+ .+++++++||+.+.++.
T Consensus 151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 9999998887765 38999999999997764
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.8e-16 Score=126.52 Aligned_cols=175 Identities=18% Similarity=0.128 Sum_probs=119.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV------- 77 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------- 77 (258)
.+++|++|||||+|+||++++++|.++|++|++++|+..... ..++.++++|+++++++.+++
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL----------PEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc----------CCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999998754321 235788999999998777554
Q ss_pred CCCcEEEecCCCCCCC-----CCCch------------------------------------------------hhHHHH
Q 025065 78 DGCDGVFHTASPVIFL-----SDNPQ------------------------------------------------EWYSLA 104 (258)
Q Consensus 78 ~~~d~Vih~a~~~~~~-----~~~~~------------------------------------------------~~Y~~s 104 (258)
.++|+|||+||..... ..... ..|+.+
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~s 155 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAA 155 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHH
Confidence 3589999999963211 00000 569999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC-------C-ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL-------N-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-------~-~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
|...+.+++.++.+ .|+++.+++||.+.++...... . ........+....... ....+..++|+++++
T Consensus 156 K~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~va~~~ 234 (260)
T PRK06523 156 KAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGI-PLGRPAEPEEVAELI 234 (260)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccC-ccCCCCCHHHHHHHH
Confidence 99999999888765 4899999999999887422100 0 0000111111100001 122356789999999
Q ss_pred HHhhcCC--CCCc-eEEEeC
Q 025065 174 IRALEVP--KASG-RYLLAG 190 (258)
Q Consensus 174 ~~~~~~~--~~~~-~~~~~~ 190 (258)
..++... ...| .+.+.+
T Consensus 235 ~~l~s~~~~~~~G~~~~vdg 254 (260)
T PRK06523 235 AFLASDRAASITGTEYVIDG 254 (260)
T ss_pred HHHhCcccccccCceEEecC
Confidence 9998753 3345 454443
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=130.07 Aligned_cols=166 Identities=11% Similarity=0.085 Sum_probs=117.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d 81 (258)
|+|+||||+|+||++++++|+++|++|++++|+.++.. .....+.....++.++++|+++++++.++++ ++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGE-ETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999999999998764422 1122222223568889999999988877664 589
Q ss_pred EEEecCCCCCCC--CCCc-h-----------------------------------------------hhHHHHHHHHHHH
Q 025065 82 GVFHTASPVIFL--SDNP-Q-----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 82 ~Vih~a~~~~~~--~~~~-~-----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
+|||+||..... .... . +.|+.+|...+.+
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL 159 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence 999999975321 1110 0 6899999998888
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+.++.+ .|+++++++|+.+.++............ ....... ....++.++|+|+.++.++++.
T Consensus 160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAM-KAQVGKL----LEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHHhcccCcEEEEEecCccccCcccccccCchhH-HHHHHHH----hhcCCCCHHHHHHHHHHHHhCC
Confidence 8887766 4899999999999887543221111111 1111110 1234679999999999999874
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=129.01 Aligned_cols=182 Identities=15% Similarity=0.104 Sum_probs=124.7
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+.+++++++||||+|+||++++++|+++|++|++++|+.++... ....+.....++.++.+|+++.+++.++++
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEE-TVALIREAGGEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 44567999999999999999999999999999999997644221 112222223568899999999988877664
Q ss_pred --CCcEEEecCCCCCCCC----CCch-----------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPVIFLS----DNPQ-----------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~----~~~~-----------------------------------------------~~Y~~sK 105 (258)
++|+|||+++...... .... ..|+.+|
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK 161 (253)
T PRK06172 82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK 161 (253)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence 4699999999742211 0110 6799999
Q ss_pred HHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 106 TLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
.+.+.+++.++.+. |+++..+.||.+-.+................ .... ....+..++|+++.+.+++...
T Consensus 162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~p~~ia~~~~~l~~~~~~ 237 (253)
T PRK06172 162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFA-AAMH---PVGRIGKVEEVASAVLYLCSDGAS 237 (253)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHH-hccC---CCCCccCHHHHHHHHHHHhCcccc
Confidence 99999999888764 7999999999997664322111111111111 1111 1223668999999999998764
Q ss_pred CCCceE-EEeC
Q 025065 181 KASGRY-LLAG 190 (258)
Q Consensus 181 ~~~~~~-~~~~ 190 (258)
...|.+ ..++
T Consensus 238 ~~~G~~i~~dg 248 (253)
T PRK06172 238 FTTGHALMVDG 248 (253)
T ss_pred CcCCcEEEECC
Confidence 345644 4443
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-16 Score=126.44 Aligned_cols=177 Identities=18% Similarity=0.183 Sum_probs=125.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++++++|||||+|+||+.+++.|.++|++|++++|+.+... .....+...+.++.++++|+++++++.++++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLE-EAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45789999999999999999999999999999998764321 1122222224568889999999887766554
Q ss_pred CCcEEEecCCCCCCCC----------CC--ch-----------------------------------------------h
Q 025065 79 GCDGVFHTASPVIFLS----------DN--PQ-----------------------------------------------E 99 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~----------~~--~~-----------------------------------------------~ 99 (258)
++|+|||++|...... .. .. .
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~ 161 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQT 161 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCCCc
Confidence 4799999999632110 00 00 6
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 100 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.|+.+|.+.+.+++.++.+ ++++++.++|+.+.++..... .+........+. ....+.+++|+++++..+
T Consensus 162 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~l 234 (253)
T PRK08217 162 NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM---KPEALERLEKMI----PVGRLGEPEEIAHTVRFI 234 (253)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc---CHHHHHHHHhcC----CcCCCcCHHHHHHHHHHH
Confidence 7999999999999888764 589999999999988754321 122233332222 234567999999999999
Q ss_pred hcCCCCCc-eEEEeC
Q 025065 177 LEVPKASG-RYLLAG 190 (258)
Q Consensus 177 ~~~~~~~~-~~~~~~ 190 (258)
+......| ++..++
T Consensus 235 ~~~~~~~g~~~~~~g 249 (253)
T PRK08217 235 IENDYVTGRVLEIDG 249 (253)
T ss_pred HcCCCcCCcEEEeCC
Confidence 97655566 554443
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.9e-16 Score=126.13 Aligned_cols=180 Identities=17% Similarity=0.171 Sum_probs=122.4
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|++.+++|+++||||+|+||++++++|.++|++|+++.++..+.. ..+.. .++.++.+|+++++++.++++
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~-~~l~~-----~~~~~~~~Dl~~~~~~~~~~~~~~ 74 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA-KELRE-----KGVFTIKCDVGNRDQVKKSKEVVE 74 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH-HHHHh-----CCCeEEEecCCCHHHHHHHHHHHH
Confidence 455567799999999999999999999999999998876543221 11111 247889999999998887764
Q ss_pred ----CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHH
Q 025065 79 ----GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSL 103 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~ 103 (258)
++|+|||+||...... .... ..|+.
T Consensus 75 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a 154 (255)
T PRK06463 75 KEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAI 154 (255)
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHH
Confidence 5799999999753211 1111 45999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC-CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL-NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+|.+.+.+++.++.+ .|+++++++||.+-.+...... .............+. ....+..++|++++++.++..
T Consensus 155 sKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~va~~~~~l~s~ 231 (255)
T PRK06463 155 TKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT---VLKTTGKPEDIANIVLFLASD 231 (255)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC---CcCCCcCHHHHHHHHHHHcCh
Confidence 999999999998865 4899999999998665322110 000001111111111 223467899999999999876
Q ss_pred CC--CCc-eEEEeC
Q 025065 180 PK--ASG-RYLLAG 190 (258)
Q Consensus 180 ~~--~~~-~~~~~~ 190 (258)
.. ..| .+.+.+
T Consensus 232 ~~~~~~G~~~~~dg 245 (255)
T PRK06463 232 DARYITGQVIVADG 245 (255)
T ss_pred hhcCCCCCEEEECC
Confidence 43 345 445544
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-16 Score=121.64 Aligned_cols=166 Identities=17% Similarity=0.170 Sum_probs=122.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcC--CcEEEEEccCCCcccHHHHhC------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT--ERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
++|.++|||||+.||.+.+++|.++|++|++..|+.+.. +++.... ..+..+..|++|++++.+++.
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL-----~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERL-----EALADEIGAGAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHH-----HHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 568899999999999999999999999999999987543 2222211 358899999999988665543
Q ss_pred -CCcEEEecCCCCCCCCCCch--------------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||.......... +.|+.+|..
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~a 159 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAA 159 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHH
Confidence 58999999999754222211 789999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCC-CCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP-ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKAS 183 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~ 183 (258)
...+.+.+..+ .+++++.+-||.|-...... ..........+... ....+..+|+|+++.+++++|..-
T Consensus 160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~-------~~~~l~p~dIA~~V~~~~~~P~~v 232 (246)
T COG4221 160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK-------GGTALTPEDIAEAVLFAATQPQHV 232 (246)
T ss_pred HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc-------cCCCCCHHHHHHHHHHHHhCCCcc
Confidence 99988887766 48999999999984432111 11111112223222 235789999999999999999765
Q ss_pred c
Q 025065 184 G 184 (258)
Q Consensus 184 ~ 184 (258)
.
T Consensus 233 n 233 (246)
T COG4221 233 N 233 (246)
T ss_pred c
Confidence 5
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-16 Score=133.16 Aligned_cols=169 Identities=21% Similarity=0.161 Sum_probs=119.8
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||...+++++|+||||+|+||++++++|.++|++|++++|+...... ...++.....++.++++|++|+++++++++
T Consensus 1 ~~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~-~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~ 79 (334)
T PRK07109 1 MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEA-LAAEIRAAGGEALAVVADVADAEAVQAAADRA 79 (334)
T ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 55556778999999999999999999999999999999987543211 112222223468889999999998887654
Q ss_pred -----CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHH
Q 025065 79 -----GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~ 103 (258)
++|++||+|+...... .... +.|+.
T Consensus 80 ~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~a 159 (334)
T PRK07109 80 EEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCA 159 (334)
T ss_pred HHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHH
Confidence 5899999999743211 1100 57999
Q ss_pred HHHHHHHHHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 104 AKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 104 sK~~~e~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+|...+.+.+.++.+ .++.+++++|+.+.++.... ........ .. ....+..++|+|++++.++.
T Consensus 160 sK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~--------~~~~~~~~-~~-~~~~~~~pe~vA~~i~~~~~ 229 (334)
T PRK07109 160 AKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW--------ARSRLPVE-PQ-PVPPIYQPEVVADAILYAAE 229 (334)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh--------hhhhcccc-cc-CCCCCCCHHHHHHHHHHHHh
Confidence 999998888777654 36999999999997663211 11111111 00 12246689999999999998
Q ss_pred CC
Q 025065 179 VP 180 (258)
Q Consensus 179 ~~ 180 (258)
++
T Consensus 230 ~~ 231 (334)
T PRK07109 230 HP 231 (334)
T ss_pred CC
Confidence 86
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.3e-16 Score=125.15 Aligned_cols=167 Identities=19% Similarity=0.114 Sum_probs=118.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..... ...++.++++|+++++++.++++
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETV---------DGRPAEFHAADVRDPDQVAALVDAIVERHG 74 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhh---------cCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999999999998764310 12467889999999988887764
Q ss_pred CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||...... .... +.|+.+|..
T Consensus 75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a 154 (252)
T PRK07856 75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAG 154 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHH
Confidence 4699999999743211 0000 679999999
Q ss_pred HHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 108 AEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 108 ~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
.+.+++.++.+. .+++..++||.+.++....... ............ ....+..++|+++++..++.... ..
T Consensus 155 ~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~p~~va~~~~~L~~~~~~~i~ 229 (252)
T PRK07856 155 LLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYG-DAEGIAAVAATV----PLGRLATPADIAWACLFLASDLASYVS 229 (252)
T ss_pred HHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhcc-CHHHHHHHhhcC----CCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence 999999988764 3899999999998764221111 111112211111 12345689999999999987542 35
Q ss_pred ceE
Q 025065 184 GRY 186 (258)
Q Consensus 184 ~~~ 186 (258)
|..
T Consensus 230 G~~ 232 (252)
T PRK07856 230 GAN 232 (252)
T ss_pred CCE
Confidence 533
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-16 Score=127.96 Aligned_cols=172 Identities=16% Similarity=0.130 Sum_probs=118.8
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
...++++++|||||+|+||.+++++|+++|++|++++|+.+.... ....+...+.++.++.+|+++++++.++++
T Consensus 5 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDE-VAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 344678999999999999999999999999999999997543211 111121123468889999999998876654
Q ss_pred ---CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHH
Q 025065 79 ---GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~s 104 (258)
++|+|||+|+...... .... +.|+.+
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 163 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTA 163 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHH
Confidence 5899999998632211 0000 689999
Q ss_pred HHHHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 105 KTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
|...+.+++.+..+. +++++.++||.+..+..... ..... +.....+.. ....+..++|++++++.++...
T Consensus 164 K~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~-~~~~~~~~~---~~~~~~~~~~va~~~~~l~~~~ 236 (263)
T PRK07814 164 KAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVV-AANDE-LRAPMEKAT---PLRRLGDPEDIAAAAVYLASPA 236 (263)
T ss_pred HHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhc-cCCHH-HHHHHHhcC---CCCCCcCHHHHHHHHHHHcCcc
Confidence 999999999888763 57899999999876532211 00111 122222221 1223568999999999998753
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.4e-16 Score=126.72 Aligned_cols=168 Identities=17% Similarity=0.124 Sum_probs=118.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++++++|||||+|+||.+++++|+++|++|++++|+. .... ....+...+.++.++++|+++.+++.++++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDE-TRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHH-HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999998872 2111 111111123468899999999998887765
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+++...... .... ..|+.+|.+.
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 170 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGV 170 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHH
Confidence 5799999999753211 1111 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+++.++++ .|+++++++||.+..+....... ............ ....+..++|++..+..++...
T Consensus 171 ~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~~ 240 (258)
T PRK06935 171 AGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA-DKNRNDEILKRI----PAGRWGEPDDLMGAAVFLASRA 240 (258)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc-ChHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcChh
Confidence 9999998875 47999999999998764321110 111111111111 2234778899999999988754
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4e-16 Score=125.79 Aligned_cols=174 Identities=16% Similarity=0.097 Sum_probs=118.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG-------- 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------- 79 (258)
+|+++||||+|+||+++++.|+++|++|++..++..+......... ..++.++++|+.+++++.+++++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999999999999999999999999877654322111111111 24688899999999888876642
Q ss_pred CcEEEecCCCCCC---------CCCCch-----------------------------------------------hhHHH
Q 025065 80 CDGVFHTASPVIF---------LSDNPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 80 ~d~Vih~a~~~~~---------~~~~~~-----------------------------------------------~~Y~~ 103 (258)
+|+|||+|+.... ...... +.|+.
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~ 161 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTT 161 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHH
Confidence 8999999986310 000000 57999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|.+.|.+++.++++ .|+++..++||.+..+..... ......... .... ....+..++|+++++..++..+
T Consensus 162 sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--~~~~~~~~~-~~~~---~~~~~~~~~~va~~~~~l~~~~ 235 (253)
T PRK08642 162 AKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--TPDEVFDLI-AATT---PLRKVTTPQEFADAVLFFASPW 235 (253)
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--CCHHHHHHH-HhcC---CcCCCCCHHHHHHHHHHHcCch
Confidence 999999999998876 479999999999876532211 111112222 2211 2335889999999999999754
Q ss_pred --CCCc-eEEEeC
Q 025065 181 --KASG-RYLLAG 190 (258)
Q Consensus 181 --~~~~-~~~~~~ 190 (258)
...| .+.+.+
T Consensus 236 ~~~~~G~~~~vdg 248 (253)
T PRK08642 236 ARAVTGQNLVVDG 248 (253)
T ss_pred hcCccCCEEEeCC
Confidence 3455 444443
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.3e-16 Score=126.66 Aligned_cols=177 Identities=18% Similarity=0.139 Sum_probs=120.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+++++||||+|+||++++++|+++|++|+++.++..+.......++.....++.++.+|+++++++.++++ .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999998887654332211122222223568899999999988776654 47
Q ss_pred cEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 81 d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~~~e 109 (258)
|+|||+++....... ... ..|+.+|...+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 161 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALG 161 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHH
Confidence 999999997532111 000 57999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 184 (258)
.+++.++.+ .+++++.++||.++++...... .........+ . ....+.+.+|++.++..++.... ..|
T Consensus 162 ~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~---~-~~~~~~~~~dva~~~~~l~~~~~~~~~G 234 (256)
T PRK12743 162 GLTKAMALELVEHGILVNAVAPGAIATPMNGMDD---SDVKPDSRPG---I-PLGRPGDTHEIASLVAWLCSEGASYTTG 234 (256)
T ss_pred HHHHHHHHHhhhhCeEEEEEEeCCccCccccccC---hHHHHHHHhc---C-CCCCCCCHHHHHHHHHHHhCccccCcCC
Confidence 998888764 4799999999999987532211 1111111111 1 12235689999999999887543 346
Q ss_pred e-EEEeCC
Q 025065 185 R-YLLAGS 191 (258)
Q Consensus 185 ~-~~~~~~ 191 (258)
. +...+.
T Consensus 235 ~~~~~dgg 242 (256)
T PRK12743 235 QSLIVDGG 242 (256)
T ss_pred cEEEECCC
Confidence 3 344443
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=126.90 Aligned_cols=167 Identities=18% Similarity=0.151 Sum_probs=114.4
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
..|++++|+||||+|+||++++++|.++|++|++++|+...... ....+ ...++++|+++++++.++++
T Consensus 3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~-~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (255)
T PRK06057 3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKA-AADEV-----GGLFVPTDVTDEDAVNALFDTAAET 76 (255)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHc-----CCcEEEeeCCCHHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999987543211 11111 12578999999988887765
Q ss_pred --CCcEEEecCCCCCCCC-----CCch------------------------------------------------hhHHH
Q 025065 79 --GCDGVFHTASPVIFLS-----DNPQ------------------------------------------------EWYSL 103 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~-----~~~~------------------------------------------------~~Y~~ 103 (258)
++|+|||+|+...... .... ..|+.
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~ 156 (255)
T PRK06057 77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTA 156 (255)
T ss_pred cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHH
Confidence 5799999998753211 0000 35999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|+..+.+++.++.+ .|++++++|||.+.++..............+... .. ....+..++|+++++..++...
T Consensus 157 sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~a~~~~~l~~~~ 232 (255)
T PRK06057 157 SKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLV---HV-PMGRFAEPEEIAAAVAFLASDD 232 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHh---cC-CCCCCcCHHHHHHHHHHHhCcc
Confidence 998887777765543 3899999999999887533211111111111110 11 2235789999999998888654
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-16 Score=128.43 Aligned_cols=170 Identities=13% Similarity=0.055 Sum_probs=117.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhc-cccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR-ELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|++|||||+|+||++++++|+++|++|++.+|+......+.+. .......++.++.+|+++.+++.++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4568999999999999999999999999999887654332211111 111113457889999999988776654
Q ss_pred -CCcEEEecCCCCCC--C--CCCch---------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIF--L--SDNPQ---------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~--~--~~~~~---------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+|+.... . ..... ..|+.+|...
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaal 206 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAI 206 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHHH
Confidence 47999999986421 1 11111 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+++.++.+ +|+++.+++||.|+++...... ........+.... ....+..++|+|.++..++...
T Consensus 207 ~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~----~~~r~~~pedva~~~~fL~s~~ 276 (294)
T PRK07985 207 LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQDKIPQFGQQT----PMKRAGQPAELAPVYVYLASQE 276 (294)
T ss_pred HHHHHHHHHHHhHhCcEEEEEECCcCccccccccC-CCHHHHHHHhccC----CCCCCCCHHHHHHHHHhhhChh
Confidence 9999888776 5899999999999998532111 1111122221111 1224678999999999998754
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-16 Score=127.36 Aligned_cols=175 Identities=15% Similarity=0.062 Sum_probs=119.0
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC-
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
||...+++|++|||||+++||++++++|+++|++|+++.|+..+........+.. .+.++.++++|+++++++.++++
T Consensus 1 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (260)
T PRK08416 1 NMSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKK 80 (260)
T ss_pred CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 4556678899999999999999999999999999988776443221111111111 13468899999999988877664
Q ss_pred ------CCcEEEecCCCCCC------CC---CCch---------------------------------------------
Q 025065 79 ------GCDGVFHTASPVIF------LS---DNPQ--------------------------------------------- 98 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~------~~---~~~~--------------------------------------------- 98 (258)
++|++||+|+.... .. ..+.
T Consensus 81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 160 (260)
T PRK08416 81 IDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIE 160 (260)
T ss_pred HHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCC
Confidence 47999999986321 00 0000
Q ss_pred --hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 99 --EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 99 --~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
..|+.+|...+.+++.++.+. |+++..+.||.+-.+..... .............. ....+..++|++.++
T Consensus 161 ~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~-~~~~~~~~~~~~~~----~~~r~~~p~~va~~~ 235 (260)
T PRK08416 161 NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF-TNYEEVKAKTEELS----PLNRMGQPEDLAGAC 235 (260)
T ss_pred CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc-cCCHHHHHHHHhcC----CCCCCCCHHHHHHHH
Confidence 579999999999999988764 89999999998865532111 11111111111111 122367899999999
Q ss_pred HHhhcCC
Q 025065 174 IRALEVP 180 (258)
Q Consensus 174 ~~~~~~~ 180 (258)
+.++...
T Consensus 236 ~~l~~~~ 242 (260)
T PRK08416 236 LFLCSEK 242 (260)
T ss_pred HHHcChh
Confidence 9998754
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.1e-16 Score=126.65 Aligned_cols=169 Identities=17% Similarity=0.105 Sum_probs=118.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++++||||+|+||++++++|.++|++|++++|+.+.........+.....++.++++|+++++++.++++
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999876432112222222223467889999999988877664
Q ss_pred CCcEEEecCCCCCCCCCC---ch-------------------------------------------------hhHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDN---PQ-------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~---~~-------------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||........ .. ..|+.+|.
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKa 165 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKA 165 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHH
Confidence 479999999975321110 00 36999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
..+.+++.++.+ +|+++.+++||.+.++..... .......... ... ....+..++|++.+++.++...
T Consensus 166 a~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~~~~~~~~~~-~~~---p~~r~~~~~dva~~~~~l~s~~ 236 (254)
T PRK06114 166 GVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--EMVHQTKLFE-EQT---PMQRMAKVDEMVGPAVFLLSDA 236 (254)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--cchHHHHHHH-hcC---CCCCCcCHHHHHHHHHHHcCcc
Confidence 999998888764 489999999999988753211 1111111111 111 1223568899999999988753
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.2e-16 Score=125.92 Aligned_cols=171 Identities=19% Similarity=0.207 Sum_probs=117.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhCC-----
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVDG----- 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~----- 79 (258)
++|++|||||+|+||+++++.|+++|++|++++|+++.... ....+.. ....+.++.+|++|++++.++++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNE-LLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHH-HHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999887644321 1111111 123467789999999988887753
Q ss_pred --CcEEEecCCCCCCC------CCCch-----------------------------------------------------
Q 025065 80 --CDGVFHTASPVIFL------SDNPQ----------------------------------------------------- 98 (258)
Q Consensus 80 --~d~Vih~a~~~~~~------~~~~~----------------------------------------------------- 98 (258)
+|+|||+|+..... .....
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~ 161 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS 161 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence 79999999753210 00000
Q ss_pred ----hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHH
Q 025065 99 ----EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVY 171 (258)
Q Consensus 99 ----~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~ 171 (258)
..|+.+|...+.+++.++.+ .++++++++|+.++++.. ..+.... .... ....+++++|+|+
T Consensus 162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-------~~~~~~~-~~~~---~~~~~~~~~dva~ 230 (256)
T PRK09186 162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-------EAFLNAY-KKCC---NGKGMLDPDDICG 230 (256)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-------HHHHHHH-HhcC---CccCCCCHHHhhh
Confidence 03999999999998877765 479999999998876431 1111121 1110 1235789999999
Q ss_pred HHHHhhcCCC--CCceE-EEe
Q 025065 172 AHIRALEVPK--ASGRY-LLA 189 (258)
Q Consensus 172 ~~~~~~~~~~--~~~~~-~~~ 189 (258)
++..++.+.. ..|.+ .+.
T Consensus 231 ~~~~l~~~~~~~~~g~~~~~~ 251 (256)
T PRK09186 231 TLVFLLSDQSKYITGQNIIVD 251 (256)
T ss_pred hHhheeccccccccCceEEec
Confidence 9999997653 34544 444
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=3e-16 Score=126.83 Aligned_cols=165 Identities=16% Similarity=0.082 Sum_probs=116.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+++||||+|+||++++++|+++|++|++++|+..+... ..+.. ..++.++++|+++.+++.++++
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~-~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 83 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSK-VAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQFG 83 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999886543211 11111 2457899999999987765443
Q ss_pred CCcEEEecCCCCCCC--C---CCch----------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFL--S---DNPQ----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~--~---~~~~----------------------------------------------~~Y~~sK~~ 107 (258)
.+|+|||+|+..... . .... +.|+.+|..
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa 163 (255)
T PRK05717 84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGG 163 (255)
T ss_pred CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHH
Confidence 479999999975321 1 0100 679999999
Q ss_pred HHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 108 AEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 108 ~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+.+++.++.+. ++++.+++||.+.++..... . .. .......... ....+.+++|++.++..++...
T Consensus 164 ~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~-~-~~-~~~~~~~~~~---~~~~~~~~~~va~~~~~l~~~~ 232 (255)
T PRK05717 164 LLALTHALAISLGPEIRVNAVSPGWIDARDPSQR-R-AE-PLSEADHAQH---PAGRVGTVEDVAAMVAWLLSRQ 232 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEEecccCcCCccccc-c-ch-HHHHHHhhcC---CCCCCcCHHHHHHHHHHHcCch
Confidence 999999988775 58999999999998742211 0 11 1111111111 1234679999999999888654
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.4e-16 Score=125.75 Aligned_cols=172 Identities=20% Similarity=0.172 Sum_probs=119.8
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||+. ++++++||||+|.||.+++++|.++|++|++++|++++... ...++...+.++.++.+|+++++++.++++
T Consensus 1 ~~~~--~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (254)
T PRK07478 1 MMRL--NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQ-LVAEIRAEGGEAVALAGDVRDEAYAKALVALA 77 (254)
T ss_pred CCCC--CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 5543 57899999999999999999999999999999987643221 112222223468889999999988887664
Q ss_pred -----CCcEEEecCCCCCCC-C---CCch------------------------------------------------hhH
Q 025065 79 -----GCDGVFHTASPVIFL-S---DNPQ------------------------------------------------EWY 101 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~-~---~~~~------------------------------------------------~~Y 101 (258)
++|+|||+||..... . .... ..|
T Consensus 78 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y 157 (254)
T PRK07478 78 VERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAY 157 (254)
T ss_pred HHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchh
Confidence 589999999974321 1 1111 569
Q ss_pred HHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 102 SLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+.+|.+.+.+++.++.+. |+++++++||.+-.+...... .... ......... ....+..++|++++++.++.
T Consensus 158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~-~~~~~~~~~---~~~~~~~~~~va~~~~~l~s 232 (254)
T PRK07478 158 AASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMG-DTPE-ALAFVAGLH---ALKRMAQPEEIAQAALFLAS 232 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccccc-CCHH-HHHHHHhcC---CCCCCcCHHHHHHHHHHHcC
Confidence 999999999999887763 799999999999776322111 1111 111111111 12235689999999999987
Q ss_pred CC
Q 025065 179 VP 180 (258)
Q Consensus 179 ~~ 180 (258)
.+
T Consensus 233 ~~ 234 (254)
T PRK07478 233 DA 234 (254)
T ss_pred ch
Confidence 54
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-16 Score=128.47 Aligned_cols=156 Identities=19% Similarity=0.128 Sum_probs=112.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++++++||||+|.||++++++|.++|++|++.+|+++.... ....+ ..+.++.+|+++++++.++++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKE-TAAEL----GLVVGGPLDVTDPASFAAFLDAVEADLG 77 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh----ccceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999999886543211 11111 247889999999988766553
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||....... ... ..|+.+|...
T Consensus 78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 157 (273)
T PRK07825 78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAV 157 (273)
T ss_pred CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHH
Confidence 57999999997532111 000 5799999988
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
+.+.+.+..+ .|+++++++|+.+-++..... .+. ....++.++|+|++++.++.++..
T Consensus 158 ~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~------------~~~----~~~~~~~~~~va~~~~~~l~~~~~ 218 (273)
T PRK07825 158 VGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT------------GGA----KGFKNVEPEDVAAAIVGTVAKPRP 218 (273)
T ss_pred HHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc------------ccc----cCCCCCCHHHHHHHHHHHHhCCCC
Confidence 8877776554 589999999998865432110 000 123478999999999999987643
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.1e-16 Score=124.03 Aligned_cols=173 Identities=18% Similarity=0.159 Sum_probs=116.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+|+||||||+|+||+++++.|+++|++|+++.++..+........+...+.++.++++|+++++++.++++ .+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999998766543322111222222223468899999999988776553 58
Q ss_pred cEEEecCCCCCCC----CCCch---------------------------------------------------hhHHHHH
Q 025065 81 DGVFHTASPVIFL----SDNPQ---------------------------------------------------EWYSLAK 105 (258)
Q Consensus 81 d~Vih~a~~~~~~----~~~~~---------------------------------------------------~~Y~~sK 105 (258)
|+|||+||..... ..... ..|+.+|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK 161 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence 9999999974321 11110 3599999
Q ss_pred HHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-
Q 025065 106 TLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK- 181 (258)
Q Consensus 106 ~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~- 181 (258)
...+.+++.++.+. +++++++|||.+.++...... .+..... ..... | .--...++|+++.++.++.++.
T Consensus 162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~--~~~~~~~-~~~~~--~-~~~~~~~e~va~~~~~l~~~~~~ 235 (248)
T PRK06947 162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG--QPGRAAR-LGAQT--P-LGRAGEADEVAETIVWLLSDAAS 235 (248)
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC--CHHHHHH-HhhcC--C-CCCCcCHHHHHHHHHHHcCcccc
Confidence 99999988887664 799999999999887532110 1111111 11111 1 1124678999999999988753
Q ss_pred -CCceE
Q 025065 182 -ASGRY 186 (258)
Q Consensus 182 -~~~~~ 186 (258)
..|.+
T Consensus 236 ~~~G~~ 241 (248)
T PRK06947 236 YVTGAL 241 (248)
T ss_pred CcCCce
Confidence 35544
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.1e-16 Score=123.04 Aligned_cols=160 Identities=17% Similarity=0.142 Sum_probs=114.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc-ccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~Vi 84 (258)
+++|+++||||+|+||++++++|.++|++|++++|+..... ..++.++.+|++++ +.+.+.+.++|+||
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~id~lv 72 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----------SGNFHFLQLDLSDDLEPLFDWVPSVDILC 72 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----------CCcEEEEECChHHHHHHHHHhhCCCCEEE
Confidence 45789999999999999999999999999999998754321 23578899999997 44444455789999
Q ss_pred ecCCCCCC----CCCCch-----------------------------------------------hhHHHHHHHHHHHHH
Q 025065 85 HTASPVIF----LSDNPQ-----------------------------------------------EWYSLAKTLAEEAAW 113 (258)
Q Consensus 85 h~a~~~~~----~~~~~~-----------------------------------------------~~Y~~sK~~~e~~~~ 113 (258)
|+|+.... ...... ..|+.+|...+.+++
T Consensus 73 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 152 (235)
T PRK06550 73 NTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTK 152 (235)
T ss_pred ECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHH
Confidence 99996421 111111 579999999999888
Q ss_pred HHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 114 KFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 114 ~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.++.+. |+++++++||.+.++....... ............ ....+...+|+|++++.++...
T Consensus 153 ~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~l~s~~ 217 (235)
T PRK06550 153 QLALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARET----PIKRWAEPEEVAELTLFLASGK 217 (235)
T ss_pred HHHHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccC----CcCCCCCHHHHHHHHHHHcChh
Confidence 877654 8999999999998875332211 111112222221 2334778899999999998653
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.7e-16 Score=127.65 Aligned_cols=163 Identities=17% Similarity=0.189 Sum_probs=117.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+++||||||+|+||+++++.|+++|++|++++|+...... ....+.....++.++.+|+++.+.+.++++ ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLAS-LAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999999999987543221 112222223468889999999988887665 58
Q ss_pred cEEEecCCCCCCC-CCCc---h----------------------------------------------hhHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFL-SDNP---Q----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 81 d~Vih~a~~~~~~-~~~~---~----------------------------------------------~~Y~~sK~~~e~ 110 (258)
|+|||+++..... ..+. . +.|+.+|...+.
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~ 159 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHG 159 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHH
Confidence 9999999874321 1111 0 679999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCC--CCC-CCcceeeHHHHHHHHHHhhcCC
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ--SFA-FPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~--~~~-~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+++.+..+ .++++++++||.+..+........ .+.+ ..+ ...++++++|+|+++..+++..
T Consensus 160 ~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 160 FFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG---------DGKPLGKSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred HHHHHHHHhhhcCceEEEEecCccccCcchhhccc---------cccccccccccccCCCCHHHHHHHHHHHhhCC
Confidence 98877643 589999999999987643211000 0110 111 3347899999999999999863
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=4e-16 Score=127.30 Aligned_cols=183 Identities=19% Similarity=0.154 Sum_probs=122.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+ +.. .....++.....++.++.+|+++++++.++++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAV-SETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHH-HHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999987 322 12222222223468899999999988876654
Q ss_pred CCcEEEecCCCCCC-CC--CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIF-LS--DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~-~~--~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
.+|++||+||.... .. ..+. ..|+.+|...
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal 161 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAV 161 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHHHHHHH
Confidence 47999999997532 11 1111 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccH-HHHHHHHcCC-CCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGA-EVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~~g~-~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
+.+++.++.+ +|++++.+.||.|..+.......... .......... ...| ...+..++|+++++..++..+ .
T Consensus 162 ~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l~s~~~~~ 240 (272)
T PRK08589 162 INFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP-LGRLGKPEEVAKLVVFLASDDSSF 240 (272)
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC-CCCCcCHHHHHHHHHHHcCchhcC
Confidence 9999998865 47999999999998764321111000 0001111000 0111 223668999999999998753 3
Q ss_pred CCce-EEEeCC
Q 025065 182 ASGR-YLLAGS 191 (258)
Q Consensus 182 ~~~~-~~~~~~ 191 (258)
..|. +...+.
T Consensus 241 ~~G~~i~vdgg 251 (272)
T PRK08589 241 ITGETIRIDGG 251 (272)
T ss_pred cCCCEEEECCC
Confidence 3553 344443
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.3e-16 Score=125.17 Aligned_cols=164 Identities=23% Similarity=0.246 Sum_probs=120.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++++++|||||+.||.++++.|.++|++|+.+.|+.++... ...++.. ..-.++.+.+|+++++++..+.+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~-la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEA-LAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999998765432 1111111 12457899999999998888764
Q ss_pred -CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
.+|++|||||...+.. .+.. +.|+.||..
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~ 162 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAF 162 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHH
Confidence 4899999999964431 1111 789999998
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
.-.+.+.+..+ .|+.++.+-||.+..++....... ... .. ..+-++..+|+|+..+..+.+.+
T Consensus 163 v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~--------~~~--~~-~~~~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 163 VLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSD--------VYL--LS-PGELVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEecCccccccccccccc--------ccc--cc-chhhccCHHHHHHHHHHHHhcCC
Confidence 87777766655 489999999999987764311000 000 00 23458899999999999998854
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.9e-16 Score=125.62 Aligned_cols=171 Identities=20% Similarity=0.242 Sum_probs=119.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc------hhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT------EHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
++++++||||+|+||++++++|.++|++|++++|+.+.... ....++...+.++.++++|+++++++.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 57899999999999999999999999999999987653211 0111121223468889999999998887665
Q ss_pred -----CCcEEEecCCCCCCCCCC--ch--------------------------------------------------hhH
Q 025065 79 -----GCDGVFHTASPVIFLSDN--PQ--------------------------------------------------EWY 101 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~~~--~~--------------------------------------------------~~Y 101 (258)
++|+|||+||........ +. +.|
T Consensus 85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y 164 (273)
T PRK08278 85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAY 164 (273)
T ss_pred HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchh
Confidence 589999999975321111 11 479
Q ss_pred HHHHHHHHHHHHHHHHHc---CCcEEEEcCCc-cccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 102 SLAKTLAEEAAWKFAKEN---GIDLVAIHPGT-VIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~-v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
+.+|.+.|.+++.++.+. +++++.+.|+. +-.+. ......+.. ....+..++|++++++.++
T Consensus 165 ~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~-----------~~~~~~~~~---~~~~~~~p~~va~~~~~l~ 230 (273)
T PRK08278 165 TMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA-----------VRNLLGGDE---AMRRSRTPEIMADAAYEIL 230 (273)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH-----------HHhcccccc---cccccCCHHHHHHHHHHHh
Confidence 999999999999988764 79999999984 32221 111111111 1223668899999999998
Q ss_pred cCCC--CCceEEEeCC
Q 025065 178 EVPK--ASGRYLLAGS 191 (258)
Q Consensus 178 ~~~~--~~~~~~~~~~ 191 (258)
.... ..|.++..++
T Consensus 231 ~~~~~~~~G~~~~~~~ 246 (273)
T PRK08278 231 SRPAREFTGNFLIDEE 246 (273)
T ss_pred cCccccceeEEEeccc
Confidence 7643 3555555444
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.5e-16 Score=125.63 Aligned_cols=181 Identities=17% Similarity=0.093 Sum_probs=122.2
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
||. .+++|+++||||+|+||++++++|+++|++|++++|+.+.... ...++.. ...++.++++|+++++++.++++
T Consensus 1 ~~~-~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (260)
T PRK07063 1 MMN-RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAER-AAAAIARDVAGARVLAVPADVTDAASVAAAVA 78 (260)
T ss_pred CCc-ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhccCCceEEEEEccCCCHHHHHHHHH
Confidence 443 3678999999999999999999999999999999987543221 1111111 13467889999999988887765
Q ss_pred -------CCcEEEecCCCCCCCC--CC-ch-----------------------------------------------hhH
Q 025065 79 -------GCDGVFHTASPVIFLS--DN-PQ-----------------------------------------------EWY 101 (258)
Q Consensus 79 -------~~d~Vih~a~~~~~~~--~~-~~-----------------------------------------------~~Y 101 (258)
++|++||+||...... .. .. ..|
T Consensus 79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 158 (260)
T PRK07063 79 AAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPY 158 (260)
T ss_pred HHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHH
Confidence 5899999999743211 10 00 579
Q ss_pred HHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 102 SLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
+.+|.+.+.+++.++.+. |+++..++||.+-.+....... .............. ....+..++|+|.+++.+
T Consensus 159 ~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~va~~~~fl 235 (260)
T PRK07063 159 PVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ---PMKRIGRPEEVAMTAVFL 235 (260)
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcC---CCCCCCCHHHHHHHHHHH
Confidence 999999999999988764 7999999999987653221100 00000111111111 122356799999999999
Q ss_pred hcCC--CCCceE
Q 025065 177 LEVP--KASGRY 186 (258)
Q Consensus 177 ~~~~--~~~~~~ 186 (258)
+... ...|..
T Consensus 236 ~s~~~~~itG~~ 247 (260)
T PRK07063 236 ASDEAPFINATC 247 (260)
T ss_pred cCccccccCCcE
Confidence 8754 245533
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.3e-16 Score=125.69 Aligned_cols=169 Identities=20% Similarity=0.128 Sum_probs=113.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------- 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------- 78 (258)
++|+++||||+|+||++++++|.++|++|++..++..+.......++......+..+.+|+++.+++..+++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 468999999999999999999999999998875433222111112222223456788999999876654331
Q ss_pred -----CCcEEEecCCCCCCCCC---Cch---------------------------------------------hhHHHHH
Q 025065 79 -----GCDGVFHTASPVIFLSD---NPQ---------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~~---~~~---------------------------------------------~~Y~~sK 105 (258)
++|+|||+||....... ... ..|+.+|
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK 162 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHH
Confidence 58999999997432111 111 5799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
...+.+++.++.+ .|+++..+.||.|.++........ . .......... ....+.+++|++.++..++...
T Consensus 163 aa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~-~-~~~~~~~~~~---~~~~~~~~~dva~~~~~l~s~~ 235 (252)
T PRK12747 163 GAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD-P-MMKQYATTIS---AFNRLGEVEDIADTAAFLASPD 235 (252)
T ss_pred HHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC-H-HHHHHHHhcC---cccCCCCHHHHHHHHHHHcCcc
Confidence 9999999988765 489999999999988753211111 0 1111111110 2234789999999999988653
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-16 Score=126.77 Aligned_cols=161 Identities=15% Similarity=0.164 Sum_probs=115.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
+||+++||||+|+||+.++++|+++|++|++++|++++... ....+.....++.++.+|+++++++.++++ +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEA-LAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999999999987643221 111111123468899999999998877664 4
Q ss_pred CcEEEecCCCCCCCCC--Cc-h-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSD--NP-Q-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~--~~-~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+++....... .. . ..|+.+|...+
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~ 163 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA 163 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence 8999999997432110 00 0 57999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
.+.+.++.+ .|++++++|||.+-++...... ..... ....++..+|+|++++.++..+.
T Consensus 164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~------~~~~~-------~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET------VQADF-------DRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCcccCCcccccc------ccccc-------ccccCCCHHHHHHHHHHHHcCCc
Confidence 998877643 4899999999999776422110 00000 11235789999999999998774
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-16 Score=124.45 Aligned_cols=168 Identities=15% Similarity=0.134 Sum_probs=115.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++|.++||||+|+||++++++|+++|++|++..++........+.++......+..+.+|+++.+++.++++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 3568999999999999999999999999998865433222112222222223457788999999988877654
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+|+....... ... ..|+.+|...
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~ 160 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI 160 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHH
Confidence 58999999997532110 000 5699999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+++.++++ .+++++.++|+.+.++..... ....+..+.... ....+..++|++.++..++..+
T Consensus 161 ~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~l~~~~ 228 (246)
T PRK12938 161 HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATI----PVRRLGSPDEIGSIVAWLASEE 228 (246)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---ChHHHHHHHhcC----CccCCcCHHHHHHHHHHHcCcc
Confidence 9888877754 589999999999987753321 112222222221 2234668999999999988654
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.7e-16 Score=125.20 Aligned_cols=180 Identities=15% Similarity=0.089 Sum_probs=122.3
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|...+++++++||||+|.||++++++|.++|+.|++..|+..+........+.....++.++.+|+++.+++.++++
T Consensus 1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~ 80 (261)
T PRK08936 1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV 80 (261)
T ss_pred CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 34456789999999999999999999999999999888754332221222222223467889999999988877654
Q ss_pred ----CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHH
Q 025065 79 ----GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSL 103 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~ 103 (258)
.+|++||+|+....... ... ..|+.
T Consensus 81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~ 160 (261)
T PRK08936 81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAA 160 (261)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHH
Confidence 47999999997432111 111 57999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|.+.+.+.+.++.+ .|++++.++||.+.++....... ............ ....+...+|+++.+.+++...
T Consensus 161 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~s~~ 235 (261)
T PRK08936 161 SKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFA-DPKQRADVESMI----PMGYIGKPEEIAAVAAWLASSE 235 (261)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccC-CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCcc
Confidence 999888888777654 48999999999998875332111 111122221111 1234667899999999988754
Q ss_pred C--CCceE
Q 025065 181 K--ASGRY 186 (258)
Q Consensus 181 ~--~~~~~ 186 (258)
. ..|.+
T Consensus 236 ~~~~~G~~ 243 (261)
T PRK08936 236 ASYVTGIT 243 (261)
T ss_pred cCCccCcE
Confidence 2 35544
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.4e-16 Score=126.66 Aligned_cols=155 Identities=19% Similarity=0.183 Sum_probs=113.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+|+++||||+|+||++++++|.++|++|++++|+.+.... ....+... .++.++.+|+++++++.++++ .+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQA-FAARLPKA-ARVSVYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhcccC-CeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999999987543211 11112111 268899999999998877654 37
Q ss_pred cEEEecCCCCCCCC----CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS----DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 81 d~Vih~a~~~~~~~----~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
|+|||+||...... .... ..|+.+|...+
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~ 159 (257)
T PRK07024 80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAI 159 (257)
T ss_pred CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHH
Confidence 99999999753211 1111 46999999999
Q ss_pred HHHHHHHH---HcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 110 EAAWKFAK---ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 110 ~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
.+++.+.. .+|++++++||+.+.++..... .. ....++.++|+++.++.++.+..
T Consensus 160 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------~~----~~~~~~~~~~~a~~~~~~l~~~~ 217 (257)
T PRK07024 160 KYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-------------PY----PMPFLMDADRFAARAARAIARGR 217 (257)
T ss_pred HHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------------CC----CCCCccCHHHHHHHHHHHHhCCC
Confidence 99888764 4589999999999987642210 00 01113579999999999998653
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=9e-16 Score=124.25 Aligned_cols=162 Identities=18% Similarity=0.122 Sum_probs=115.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|.++|++|++++|+.... .++.++++|+++++++.++++
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 71 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVISKYG 71 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999876432 257889999999988877664
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 72 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal 151 (258)
T PRK06398 72 RIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAV 151 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHH
Confidence 5899999999753211 1111 6799999999
Q ss_pred HHHHHHHHHHc--CCcEEEEcCCccccCCcCCCC----CccHHHHHHHHcC-CCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 109 EEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPIL----NFGAEVILNLING-DQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 109 e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~g-~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+.+.++.+. ++++..++||.+-.+...... ........+.... .... ....+..++|+|+++..++...
T Consensus 152 ~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~eva~~~~~l~s~~ 229 (258)
T PRK06398 152 LGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMH-PMKRVGKPEEVAYVVAFLASDL 229 (258)
T ss_pred HHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcC-CcCCCcCHHHHHHHHHHHcCcc
Confidence 99999988764 489999999998765321100 0000001110000 0011 2234678999999999998754
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.7e-16 Score=124.55 Aligned_cols=151 Identities=17% Similarity=0.185 Sum_probs=112.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC----CcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG----CDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d~V 83 (258)
|++++||||+|+||++++++|+++|++|++++|+++... ++.....++.++++|+++.+++.+++++ +|.+
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~ 75 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLD-----ELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELW 75 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH-----HHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence 368999999999999999999999999999998753321 1111123578899999999999988764 6899
Q ss_pred EecCCCCCCCC---CCch---------------------------------------------hhHHHHHHHHHHHHHHH
Q 025065 84 FHTASPVIFLS---DNPQ---------------------------------------------EWYSLAKTLAEEAAWKF 115 (258)
Q Consensus 84 ih~a~~~~~~~---~~~~---------------------------------------------~~Y~~sK~~~e~~~~~~ 115 (258)
+|+|+...... .... ..|+.+|...+.+.+.+
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 155 (240)
T PRK06101 76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTL 155 (240)
T ss_pred EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHH
Confidence 99998642211 1111 56999999999998887
Q ss_pred HH---HcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 116 AK---ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 116 ~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+. .+|++++++|||.++++...... . .....+..+|+++.++..++..
T Consensus 156 ~~e~~~~gi~v~~v~pg~i~t~~~~~~~-------------~----~~~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 156 QLDLRPKGIEVVTVFPGFVATPLTDKNT-------------F----AMPMIITVEQASQEIRAQLARG 206 (240)
T ss_pred HHHHHhcCceEEEEeCCcCCCCCcCCCC-------------C----CCCcccCHHHHHHHHHHHHhcC
Confidence 64 45899999999999987533210 0 0011468999999999999875
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.3e-16 Score=127.50 Aligned_cols=168 Identities=18% Similarity=0.149 Sum_probs=113.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-CCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-GCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~Vih~ 86 (258)
+++||||||+|+||++++++|+++|++|++++|+++.... ..........++.++++|+++++.+.+++. ++|+|||+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTA-LRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 4689999999999999999999999999999987543211 001111112458889999999999998886 79999999
Q ss_pred CCCCCCCCC--Cch------------------------------------------------hhHHHHHHHHHHHHHHHH
Q 025065 87 ASPVIFLSD--NPQ------------------------------------------------EWYSLAKTLAEEAAWKFA 116 (258)
Q Consensus 87 a~~~~~~~~--~~~------------------------------------------------~~Y~~sK~~~e~~~~~~~ 116 (258)
|+....... .+. ..|+.+|...|.+++.+.
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~ 160 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMH 160 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHH
Confidence 996432110 000 479999999999887766
Q ss_pred HH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-----CCcceeeHHHHHHHHHHhhcCC
Q 025065 117 KE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-----FPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 117 ~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-----~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+ .|++++++|||.+..+........ ........ ..++ ...++...+|++..++.++..+
T Consensus 161 ~~~~~~gi~~~~v~pg~~~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (257)
T PRK09291 161 AELKPFGIQVATVNPGPYLTGFNDTMAET----PKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPAD 229 (257)
T ss_pred HHHHhcCcEEEEEecCcccccchhhhhhh----hhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCC
Confidence 54 599999999998754322111000 00000000 0000 2234578889988888888764
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.6e-16 Score=124.99 Aligned_cols=175 Identities=19% Similarity=0.142 Sum_probs=120.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++++++||||+|+||++++++|+++|++|++++|+.... +....+.....++.++++|+++++++.++++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIE--KLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH--HHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999999999875311 1111111113467889999999988887654
Q ss_pred CCcEEEecCCCCCCCC--C-Cch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS--D-NPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~--~-~~~------------------------------------------------~~Y~~sK~~ 107 (258)
.+|+|||+|+...... . ... ..|+.+|..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a 161 (263)
T PRK08226 82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAA 161 (263)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHH
Confidence 5799999999743211 1 101 579999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccccCCcCCC----CC-ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPI----LN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~----~~-~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+.+++.++.+. +++++.++||.+.++..... .+ .....+..+..+. ....+..++|+++++..++..
T Consensus 162 ~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~~va~~~~~l~~~ 237 (263)
T PRK08226 162 IVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAI----PLRRLADPLEVGELAAFLASD 237 (263)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccC----CCCCCCCHHHHHHHHHHHcCc
Confidence 999998887654 79999999999988732210 00 1112223332222 123456899999999988864
Q ss_pred C--CCCceE
Q 025065 180 P--KASGRY 186 (258)
Q Consensus 180 ~--~~~~~~ 186 (258)
. ...|..
T Consensus 238 ~~~~~~g~~ 246 (263)
T PRK08226 238 ESSYLTGTQ 246 (263)
T ss_pred hhcCCcCce
Confidence 3 345533
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5e-16 Score=125.43 Aligned_cols=174 Identities=13% Similarity=0.085 Sum_probs=121.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+.++++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|+++++.+.+++.
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAEL-AVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 467899999999999999999999999999999987543221 112222113457788999999988887664
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+++...... .... ..|+.+|.+.
T Consensus 86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 165 (254)
T PRK08085 86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAV 165 (254)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHH
Confidence 4799999999743211 1110 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KAS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 183 (258)
+.+++.++.+ +|+++.+++||.+.++....... ....... ..... ....+...+|++.++..++... ...
T Consensus 166 ~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~-~~~~~---p~~~~~~~~~va~~~~~l~~~~~~~i~ 240 (254)
T PRK08085 166 KMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEAFTAW-LCKRT---PAARWGDPQELIGAAVFLSSKASDFVN 240 (254)
T ss_pred HHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHHHHHH-HHhcC---CCCCCcCHHHHHHHHHHHhCccccCCc
Confidence 9999998765 48999999999998875332111 1111112 12221 2345778999999999988753 335
Q ss_pred ce
Q 025065 184 GR 185 (258)
Q Consensus 184 ~~ 185 (258)
|.
T Consensus 241 G~ 242 (254)
T PRK08085 241 GH 242 (254)
T ss_pred CC
Confidence 53
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-16 Score=123.89 Aligned_cols=157 Identities=24% Similarity=0.259 Sum_probs=113.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++++|+||||+|+||++++++|+++|++|++++|++..... ....+... .++.++++|+.+.+++.++++ +
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~-~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEE-AAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHH-HHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999987643211 11222111 468899999999988877665 6
Q ss_pred CcEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e~ 110 (258)
+|+|||+++...... .... ..|+.+|...+.
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~ 162 (237)
T PRK07326 83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVG 162 (237)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHH
Confidence 899999998743211 0000 469999999988
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.+.++.+ .|++++++||+.+.++...... . . .....+..+|+++.++.++..+.
T Consensus 163 ~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-~-----------~----~~~~~~~~~d~a~~~~~~l~~~~ 220 (237)
T PRK07326 163 FSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-S-----------E----KDAWKIQPEDIAQLVLDLLKMPP 220 (237)
T ss_pred HHHHHHHHhcccCcEEEEEeeccccCccccccc-c-----------h----hhhccCCHHHHHHHHHHHHhCCc
Confidence 88877543 5899999999999776432110 0 0 00113678999999999998875
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.8e-16 Score=125.87 Aligned_cols=171 Identities=16% Similarity=0.093 Sum_probs=119.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++++||||+|+||++++++|+++|++|++++|+.+.... ....+...+.++.++++|+++++++.+++.
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDK-GLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999887643321 112222223468899999999998887764
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
.+|+|||+||...... .... ..|+.+|...
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal 166 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGL 166 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHH
Confidence 4799999999854321 1111 5799999999
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCC----ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILN----FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+++.++++. |++++.++||.+.++....... .....+........ ....+..++|+|..+..++...
T Consensus 167 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva~~~~~l~~~~ 242 (265)
T PRK07097 167 KMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKT---PAARWGDPEDLAGPAVFLASDA 242 (265)
T ss_pred HHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcC---CccCCcCHHHHHHHHHHHhCcc
Confidence 99999988764 8999999999998874322110 00000111111110 1223678899999999999863
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.1e-16 Score=126.60 Aligned_cols=166 Identities=14% Similarity=0.107 Sum_probs=118.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ...++...+.++..+.+|+++++++.++++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEK-LADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999987543221 112222223467889999999988877654
Q ss_pred CCcEEEecCCCCCCCCC--Cc-h--------------------------------------------------hhHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD--NP-Q--------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~--~~-~--------------------------------------------------~~Y~~sK 105 (258)
++|++||+|+....... .. . ..|+.+|
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asK 165 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASK 165 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHH
Confidence 68999999997532211 00 0 3599999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
...+.+++.++.+ .|+++..++||.+-.+..... ........... ....+..++|+|+++..++...
T Consensus 166 aal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~----~~~r~~~p~~va~~~~~L~s~~ 235 (253)
T PRK05867 166 AAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY----TEYQPLWEPKI----PLGRLGRPEELAGLYLYLASEA 235 (253)
T ss_pred HHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc----hHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCcc
Confidence 9999999988765 489999999999977643211 11111111111 1224678999999999998753
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=123.13 Aligned_cols=175 Identities=17% Similarity=0.113 Sum_probs=122.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++++++|||||+|+||++++++|+++|++|++++|+..... ...... ...+..+.+|+++++++.++++
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~--~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAE--VAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999998754321 111111 2356789999999988877664
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||++|....... ... ..|+.+|.+.
T Consensus 89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 168 (255)
T PRK06841 89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGV 168 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHH
Confidence 57999999997532111 110 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++.+ .|++++.++||.+..+........ ........+. ....+.+++|++++++.++..+. ..
T Consensus 169 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~~~~~~ 242 (255)
T PRK06841 169 VGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG--EKGERAKKLI----PAGRFAYPEEIAAAALFLASDAAAMIT 242 (255)
T ss_pred HHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch--hHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCccccCcc
Confidence 9998888766 489999999999987643211110 1111111211 23457899999999999997643 35
Q ss_pred ceE-EEeC
Q 025065 184 GRY-LLAG 190 (258)
Q Consensus 184 ~~~-~~~~ 190 (258)
|.. .+.+
T Consensus 243 G~~i~~dg 250 (255)
T PRK06841 243 GENLVIDG 250 (255)
T ss_pred CCEEEECC
Confidence 533 4443
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=123.32 Aligned_cols=171 Identities=15% Similarity=0.142 Sum_probs=118.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|.||++++++|.++|++|++++|+..+.....++ ..+.++.++.+|+++.+++.++++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE---ALGRKFHFITADLIQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH---HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999988754321111121 123568899999999998887764
Q ss_pred CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||....... ... ..|+.+|..
T Consensus 83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a 162 (251)
T PRK12481 83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSA 162 (251)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHH
Confidence 48999999997532111 111 579999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KA 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 182 (258)
.+.+++.++.+ +|+++..++||.+-.+..... ............ . .| ...+..++|++.++..++... ..
T Consensus 163 ~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~-~~~~~~~~~~~~-~--~p-~~~~~~peeva~~~~~L~s~~~~~~ 237 (251)
T PRK12481 163 VMGLTRALATELSQYNINVNAIAPGYMATDNTAAL-RADTARNEAILE-R--IP-ASRWGTPDDLAGPAIFLSSSASDYV 237 (251)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc-ccChHHHHHHHh-c--CC-CCCCcCHHHHHHHHHHHhCccccCc
Confidence 99999888764 589999999999976532211 001111111111 1 11 224678999999999998753 24
Q ss_pred Cc
Q 025065 183 SG 184 (258)
Q Consensus 183 ~~ 184 (258)
.|
T Consensus 238 ~G 239 (251)
T PRK12481 238 TG 239 (251)
T ss_pred CC
Confidence 55
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.4e-16 Score=125.23 Aligned_cols=170 Identities=14% Similarity=0.135 Sum_probs=115.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
||++|||||+|+||++++++|.++|++|++++|+..... .+. ..++.++.+|+++.+++.++++ ++
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~--~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 73 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE--ALA-----AAGFTAVQLDVNDGAALARLAEELEAEHGGL 73 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHH-----HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 368999999999999999999999999999998753321 111 1246788999999988877653 58
Q ss_pred cEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 81 d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
|+|||+||...... .... +.|+.+|...+.+
T Consensus 74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~ 153 (274)
T PRK05693 74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL 153 (274)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence 99999999743211 1100 5799999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCC----------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILN----------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~----------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
++.++.+ +|+++++++||.|.++....... ............... ..-....++|+|+.++.+++
T Consensus 154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~i~~~~~ 231 (274)
T PRK05693 154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARA--SQDNPTPAAEFARQLLAAVQ 231 (274)
T ss_pred HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHh--ccCCCCCHHHHHHHHHHHHh
Confidence 8887655 58999999999998764321100 000000100000000 01123578999999999988
Q ss_pred CCCCCceE
Q 025065 179 VPKASGRY 186 (258)
Q Consensus 179 ~~~~~~~~ 186 (258)
++.....+
T Consensus 232 ~~~~~~~~ 239 (274)
T PRK05693 232 QSPRPRLV 239 (274)
T ss_pred CCCCCceE
Confidence 76544444
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.9e-16 Score=139.90 Aligned_cols=180 Identities=23% Similarity=0.185 Sum_probs=123.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+.++++|||||+|+||++++++|.++|++|++++|+.+.... ....+.. ..++.++.+|+++.+++.++++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~-~~~~l~~-~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEA-AAAELGG-PDRALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHH-HHHHHhc-cCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 456899999999999999999999999999999987644221 1111111 1368899999999988877664
Q ss_pred CCcEEEecCCCCCCCCCC---ch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDN---PQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~---~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||........ .. +.|+.+|..
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa 577 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAA 577 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHH
Confidence 589999999964321100 00 679999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccc-cCCcCCCCCccHHHHHHHHcCCC------CCC---CCcceeeHHHHHHHHH
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVI-GPFFQPILNFGAEVILNLINGDQ------SFA---FPYIFVEIRDVVYAHI 174 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~g~~------~~~---~~~~~i~v~D~a~~~~ 174 (258)
.+.+++.++.+. |+++++++|+.|| ++...... .. .......+.. .+. ..+.+++++|+|+++.
T Consensus 578 ~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~--~~-~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~ 654 (681)
T PRK08324 578 ELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGE--WI-EARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVV 654 (681)
T ss_pred HHHHHHHHHHHhcccCeEEEEEeCceeecCCccccch--hh-hhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHH
Confidence 999999987664 6999999999998 55322110 00 0000000100 011 4567999999999999
Q ss_pred Hhhc--CCCCCc-eEEEeC
Q 025065 175 RALE--VPKASG-RYLLAG 190 (258)
Q Consensus 175 ~~~~--~~~~~~-~~~~~~ 190 (258)
.++. .....| ++++++
T Consensus 655 ~l~s~~~~~~tG~~i~vdg 673 (681)
T PRK08324 655 FLASGLLSKTTGAIITVDG 673 (681)
T ss_pred HHhCccccCCcCCEEEECC
Confidence 9984 334455 565543
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.4e-16 Score=123.94 Aligned_cols=175 Identities=15% Similarity=0.065 Sum_probs=122.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+++||||+|+||++++++|.++|++|++++|+.+.... ...++.....++.++.+|+++++++.++++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEA-AVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHH-HHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999999999997543211 111122223468899999999988877664
Q ss_pred CCcEEEecCCCCCCCCCC---ch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDN---PQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~---~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+++........ .. ..|+.+|.+.
T Consensus 88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 167 (256)
T PRK06124 88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGL 167 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHH
Confidence 469999999974321110 00 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++.+ .+++++.++|+.+.++....... ....... ..... ....+++++|++++++.++..+. ..
T Consensus 168 ~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~-~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~~~~ 242 (256)
T PRK06124 168 TGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA-DPAVGPW-LAQRT---PLGRWGRPEEIAGAAVFLASPAASYVN 242 (256)
T ss_pred HHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc-ChHHHHH-HHhcC---CCCCCCCHHHHHHHHHHHcCcccCCcC
Confidence 9998887655 48999999999999875322111 1111111 11111 23357899999999999998753 34
Q ss_pred ceE
Q 025065 184 GRY 186 (258)
Q Consensus 184 ~~~ 186 (258)
|.+
T Consensus 243 G~~ 245 (256)
T PRK06124 243 GHV 245 (256)
T ss_pred CCE
Confidence 644
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.1e-16 Score=124.63 Aligned_cols=176 Identities=15% Similarity=0.075 Sum_probs=118.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++++++|||||+|+||++++++|+++|++|++++|+.+.... ....+.....++.++.+|+++++++.++++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDA-AVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999987643221 111121112456889999999988877654
Q ss_pred CCcEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+|+...... .... ..|+.+|...+
T Consensus 86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a~~ 165 (264)
T PRK07576 86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVD 165 (264)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHHHH
Confidence 4799999998532111 0010 57999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 184 (258)
.+++.++.+ .+++++.++|+.+.+........... ......... + ....+...+|+|++++.++..+. ..|
T Consensus 166 ~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~-~~~~~~~~~--~-~~~~~~~~~dva~~~~~l~~~~~~~~~G 241 (264)
T PRK07576 166 MLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSP-ELQAAVAQS--V-PLKRNGTKQDIANAALFLASDMASYITG 241 (264)
T ss_pred HHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCH-HHHHHHHhc--C-CCCCCCCHHHHHHHHHHHcChhhcCccC
Confidence 999888765 47999999999987532111000000 111111111 1 23346789999999999997532 356
Q ss_pred eE
Q 025065 185 RY 186 (258)
Q Consensus 185 ~~ 186 (258)
.+
T Consensus 242 ~~ 243 (264)
T PRK07576 242 VV 243 (264)
T ss_pred CE
Confidence 44
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-15 Score=123.11 Aligned_cols=174 Identities=21% Similarity=0.196 Sum_probs=120.0
Q ss_pred CCCCC--CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC
Q 025065 1 MMSGE--GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 1 mm~~~--~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
||... +++++++||||+|+||++++++|+++|++|++++|+...... ....+.....++.++++|+++.+++.++++
T Consensus 1 ~~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 79 (278)
T PRK08277 1 MMPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEA-VVAEIKAAGGEALAVKADVLDKESLEQARQ 79 (278)
T ss_pred CCCceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 56653 356899999999999999999999999999999987533211 111111112457889999999988876654
Q ss_pred -------CCcEEEecCCCCCCCC------------------CCch-----------------------------------
Q 025065 79 -------GCDGVFHTASPVIFLS------------------DNPQ----------------------------------- 98 (258)
Q Consensus 79 -------~~d~Vih~a~~~~~~~------------------~~~~----------------------------------- 98 (258)
++|+|||+|+...... ....
T Consensus 80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~i 159 (278)
T PRK08277 80 QILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINI 159 (278)
T ss_pred HHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 6899999999642210 0000
Q ss_pred ------------hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCC----CccHHHHHHHHcCCCCCCC
Q 025065 99 ------------EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPIL----NFGAEVILNLINGDQSFAF 159 (258)
Q Consensus 99 ------------~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~g~~~~~~ 159 (258)
..|+.+|...+.+++.++.+. |+++..++||.+.++...... .............. .
T Consensus 160 sS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----p 235 (278)
T PRK08277 160 SSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHT----P 235 (278)
T ss_pred ccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccC----C
Confidence 579999999999999888764 799999999999887422110 00011111111111 2
Q ss_pred CcceeeHHHHHHHHHHhhcC
Q 025065 160 PYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 160 ~~~~i~v~D~a~~~~~~~~~ 179 (258)
...+...+|+|++++.++..
T Consensus 236 ~~r~~~~~dva~~~~~l~s~ 255 (278)
T PRK08277 236 MGRFGKPEELLGTLLWLADE 255 (278)
T ss_pred ccCCCCHHHHHHHHHHHcCc
Confidence 23466899999999998876
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-15 Score=122.50 Aligned_cols=177 Identities=19% Similarity=0.149 Sum_probs=119.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+|++|||||+|+||++++++|+++|++|++++|+.+.... ....+.....++.++++|+++++.+.++++ ++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQA-AADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999987643221 111121123467889999999988777664 58
Q ss_pred cEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 81 d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~~~e 109 (258)
|+|||+|+....... ... +.|+.+|...+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR 160 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence 999999987432111 000 56999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCC--------CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL--------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
.+++.++.+ .|++++.++||.+.++...... .........+. ... ....+...+|++.++..++.
T Consensus 161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~va~~~~~L~~ 236 (256)
T PRK08643 161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFA-KDI---TLGRLSEPEDVANCVSFLAG 236 (256)
T ss_pred HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHh-ccC---CCCCCcCHHHHHHHHHHHhC
Confidence 988888764 5899999999999876422100 00000011111 111 12236689999999999987
Q ss_pred CC--CCCceE-EEe
Q 025065 179 VP--KASGRY-LLA 189 (258)
Q Consensus 179 ~~--~~~~~~-~~~ 189 (258)
.. ...|.. .+.
T Consensus 237 ~~~~~~~G~~i~vd 250 (256)
T PRK08643 237 PDSDYITGQTIIVD 250 (256)
T ss_pred ccccCccCcEEEeC
Confidence 54 345533 443
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=122.66 Aligned_cols=175 Identities=21% Similarity=0.198 Sum_probs=119.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+++++||||+|+||++++++|.++|++|++++|+..+..............++.++.+|+++.+.+.++++ .+
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 36899999999999999999999999999999885421111111111123468899999999988777654 48
Q ss_pred cEEEecCCCCCCCC-CC--ch-----------------------------------------------hhHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS-DN--PQ-----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 81 d~Vih~a~~~~~~~-~~--~~-----------------------------------------------~~Y~~sK~~~e~ 110 (258)
|+|||+++...... .+ .. ..|+.+|.+.+.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 99999999753211 00 00 569999999998
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc-
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG- 184 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 184 (258)
+++.++.+ .++++++++|+.+.++...... ......+.... ....+..++|+++++..++.... ..|
T Consensus 162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~~~~~~G~ 234 (245)
T PRK12824 162 FTKALASEGARYGITVNCIAPGYIATPMVEQMG---PEVLQSIVNQI----PMKRLGTPEEIAAAVAFLVSEAAGFITGE 234 (245)
T ss_pred HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---HHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCccccCccCc
Confidence 88887653 4899999999999877533211 11222222221 23346688999999988886532 344
Q ss_pred eEEEe
Q 025065 185 RYLLA 189 (258)
Q Consensus 185 ~~~~~ 189 (258)
.+.++
T Consensus 235 ~~~~~ 239 (245)
T PRK12824 235 TISIN 239 (245)
T ss_pred EEEEC
Confidence 45444
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.7e-16 Score=125.35 Aligned_cols=155 Identities=17% Similarity=0.181 Sum_probs=113.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc-CcCCcEEEEEccCCCcccHHHHhC----CCcE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVD----GCDG 82 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~ 82 (258)
||+++||||+|+||++++++|+++|++|++++|+.++... ....+. ....++.++++|+++++++.++++ .+|+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~ 79 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLER-LADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI 79 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHH-HHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence 4689999999999999999999999999999997644321 111111 113468999999999998887765 4699
Q ss_pred EEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHHHHHH
Q 025065 83 VFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 83 Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
|||++|....... ... ..|+.+|...+.++
T Consensus 80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~ 159 (243)
T PRK07102 80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFL 159 (243)
T ss_pred EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHH
Confidence 9999987432111 100 46999999999998
Q ss_pred HHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 113 WKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 113 ~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.++.+ .|+++++++|+.++++..... . . .....+.++|+++.++.+++++
T Consensus 160 ~~l~~el~~~gi~v~~v~pg~v~t~~~~~~------------~----~-~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 160 SGLRNRLFKSGVHVLTVKPGFVRTPMTAGL------------K----L-PGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred HHHHHHhhccCcEEEEEecCcccChhhhcc------------C----C-CccccCCHHHHHHHHHHHHhCC
Confidence 887643 589999999999988632210 0 0 1112567999999999999865
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-15 Score=123.19 Aligned_cols=162 Identities=17% Similarity=0.215 Sum_probs=114.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d 81 (258)
|+|+||||+|+||.+++++|+++|++|++++|++.... .+... .+.++.++.+|+++.+++.++++ ++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~--~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ--ELKDE--LGDNLYIAQLDVRNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHH--hccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999999999998754321 11110 12468889999999988877654 689
Q ss_pred EEEecCCCCCC-C--C-CCch-----------------------------------------------hhHHHHHHHHHH
Q 025065 82 GVFHTASPVIF-L--S-DNPQ-----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 82 ~Vih~a~~~~~-~--~-~~~~-----------------------------------------------~~Y~~sK~~~e~ 110 (258)
+|||+||.... . . .... +.|+.+|...+.
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~ 156 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence 99999987421 1 0 0100 589999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCC-CCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPI-LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.+.++.+ .++.+++++||.+.|+..... ............ ....++.++|+|++++.++..+.
T Consensus 157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dvA~~~~~l~~~~~ 224 (248)
T PRK10538 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY-------QNTVALTPEDVSEAVWWVATLPA 224 (248)
T ss_pred HHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhc-------cccCCCCHHHHHHHHHHHhcCCC
Confidence 99888765 479999999999986642211 000110111111 12245789999999999998664
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.6e-16 Score=129.47 Aligned_cols=165 Identities=18% Similarity=0.165 Sum_probs=118.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-------C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------D 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~ 78 (258)
+++++++||||+|.||++++++|.++|++|++++|+.+.... ...++...+..+.++.+|++|++++.+++ .
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~-~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQA-VAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG 83 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 567899999999999999999999999999999987643221 11222222356788899999999888776 3
Q ss_pred CCcEEEecCCCCCCCC--CCc-h-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS--DNP-Q-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~--~~~-~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||...... ..+ . ..|+.+|...
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal 163 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGL 163 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHH
Confidence 5899999999753311 111 1 5799999998
Q ss_pred HHHHHHHHHH----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 109 EEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 109 e~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.+.+.+..+ .++.++.+.||.+.++....... . .+.... ....+..++|+|++++.+++++.
T Consensus 164 ~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~--------~-~~~~~~-~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 164 RGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN--------Y-TGRRLT-PPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred HHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc--------c-cccccc-CCCCCCCHHHHHHHHHHHHhCCC
Confidence 8887777655 37999999999998875322110 0 111000 12236789999999999998764
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.9e-16 Score=123.29 Aligned_cols=173 Identities=18% Similarity=0.101 Sum_probs=117.5
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCcEE
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCDGV 83 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~V 83 (258)
+||||++|+||++++++|.++|++|++++|+..+........+...+..+.++.+|+++++++.+++. .+|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999998875322111112222223457899999999998877664 46999
Q ss_pred EecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHHHHHHH
Q 025065 84 FHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLAEEAAW 113 (258)
Q Consensus 84 ih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~e~~~~ 113 (258)
||+++....... ... ..|+.+|...+.+++
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~ 160 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK 160 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence 999997532110 000 569999999998888
Q ss_pred HHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEE
Q 025065 114 KFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYL 187 (258)
Q Consensus 114 ~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~ 187 (258)
.++++ .|+.++++||+.+.++..... ............ ....+.+++|+++++..++.... ..| +|+
T Consensus 161 ~l~~~~~~~g~~~~~i~pg~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~ 233 (239)
T TIGR01830 161 SLAKELASRNITVNAVAPGFIDTDMTDKL---SEKVKKKILSQI----PLGRFGTPEEVANAVAFLASDEASYITGQVIH 233 (239)
T ss_pred HHHHHHhhcCeEEEEEEECCCCChhhhhc---ChHHHHHHHhcC----CcCCCcCHHHHHHHHHHHhCcccCCcCCCEEE
Confidence 87654 589999999998876532221 111222222221 22346789999999998885532 344 556
Q ss_pred EeC
Q 025065 188 LAG 190 (258)
Q Consensus 188 ~~~ 190 (258)
+++
T Consensus 234 ~~~ 236 (239)
T TIGR01830 234 VDG 236 (239)
T ss_pred eCC
Confidence 554
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-15 Score=122.97 Aligned_cols=173 Identities=20% Similarity=0.170 Sum_probs=118.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEE-EcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++++||||||+|+||++++++|+++|++|+++ +|+...... ....+.....++.++.+|+++++.+.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQE-LLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999988 776543211 111111123468899999999998877665
Q ss_pred -CCcEEEecCCCCCCCC--C-Cch-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS--D-NPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~--~-~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+++...... . ... ..|+.+|..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a 161 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGA 161 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHH
Confidence 6899999999753211 0 000 579999998
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--C
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--A 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 182 (258)
.+.+++.+..+ .|++++.+|||.+.++........ ......... ....+..++|+++++..++.... .
T Consensus 162 ~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~~~~~ 234 (247)
T PRK05565 162 VNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE---DKEGLAEEI----PLGRLGKPEEIAKVVLFLASDDASYI 234 (247)
T ss_pred HHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH---HHHHHHhcC----CCCCCCCHHHHHHHHHHHcCCccCCc
Confidence 88887777654 489999999999976643322111 111111111 22346789999999999987643 3
Q ss_pred CceE
Q 025065 183 SGRY 186 (258)
Q Consensus 183 ~~~~ 186 (258)
.|.+
T Consensus 235 ~g~~ 238 (247)
T PRK05565 235 TGQI 238 (247)
T ss_pred cCcE
Confidence 4544
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.7e-15 Score=120.94 Aligned_cols=180 Identities=20% Similarity=0.200 Sum_probs=122.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++++||||+|+||.+++++|.++|++|++++|+..... ...+++......+.++++|+.+.+++.++++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQ-AVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG 84 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999998654321 1112221123457789999999988776654
Q ss_pred CCcEEEecCCCCCC----CCCCch-----------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIF----LSDNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~----~~~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
.+|+|||+|+.... ...... +.|+.+|..
T Consensus 85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 164 (252)
T PRK07035 85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAA 164 (252)
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHH
Confidence 48999999986321 111111 579999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--C
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--A 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 182 (258)
.+.+++.++.+ .|++++.+.||.+..+....... ............ ....+..++|+|+++..++.+.. .
T Consensus 165 l~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~~~~~ 239 (252)
T PRK07035 165 VISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFK-NDAILKQALAHI----PLRRHAEPSEMAGAVLYLASDASSYT 239 (252)
T ss_pred HHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccC-CHHHHHHHHccC----CCCCcCCHHHHHHHHHHHhCccccCc
Confidence 99999998765 38999999999997654322111 111222222211 12346689999999999987653 3
Q ss_pred Cce-EEEeCC
Q 025065 183 SGR-YLLAGS 191 (258)
Q Consensus 183 ~~~-~~~~~~ 191 (258)
.|. +...+.
T Consensus 240 ~g~~~~~dgg 249 (252)
T PRK07035 240 TGECLNVDGG 249 (252)
T ss_pred cCCEEEeCCC
Confidence 553 344443
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3e-16 Score=132.86 Aligned_cols=201 Identities=23% Similarity=0.298 Sum_probs=140.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC---CEEEEEEcCCCCccc-hhhccc-------------cCcCCcEEEEEccCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG---YTVKATVRDPNSPKT-EHLREL-------------DGATERLHLFKANLL 68 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~~~-------------~~~~~~~~~~~~Dl~ 68 (258)
..+|+|+|||||||+|+-|++.|+..- ..++.+.|....... +.+... .....++..+.||++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 367999999999999999999999753 478888886654432 222211 112367899999999
Q ss_pred Cc------ccHHHHhCCCcEEEecCCCCCCCCCCch--------------------------------------------
Q 025065 69 EE------GSFDSAVDGCDGVFHTASPVIFLSDNPQ-------------------------------------------- 98 (258)
Q Consensus 69 ~~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~-------------------------------------------- 98 (258)
++ ++++.+.+++|+|||+||...+.+....
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~ 169 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKP 169 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccc
Confidence 76 4555566789999999999776544332
Q ss_pred ------------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCc
Q 025065 99 ------------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNF 142 (258)
Q Consensus 99 ------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~ 142 (258)
+.|..+|+.+|.++...+ .+++.+|+||+.|......+..+.
T Consensus 170 y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP~pGW 247 (467)
T KOG1221|consen 170 YPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEPFPGW 247 (467)
T ss_pred cCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCCCCCc
Confidence 889999999999987654 379999999999998765543221
Q ss_pred c------HHHHHHHHcCC-CCC---C-CCcceeeHHHHHHHHHHhhc--CCCC----CceEEEe---CCCcCHHHHHHHH
Q 025065 143 G------AEVILNLINGD-QSF---A-FPYIFVEIRDVVYAHIRALE--VPKA----SGRYLLA---GSVAQHSDILKFL 202 (258)
Q Consensus 143 ~------~~~~~~~~~g~-~~~---~-~~~~~i~v~D~a~~~~~~~~--~~~~----~~~~~~~---~~~~t~~e~~~~i 202 (258)
. ..++...-.|. ..+ + ...+++.+|.++.+++.+.- .... ..+|+++ ..++++.++.+..
T Consensus 248 idn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~ 327 (467)
T KOG1221|consen 248 IDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELA 327 (467)
T ss_pred cccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHH
Confidence 1 00111111222 111 1 67899999999999997662 1111 2278554 3689999999999
Q ss_pred HHhCCC
Q 025065 203 REHYPT 208 (258)
Q Consensus 203 ~~~~~~ 208 (258)
.+.+..
T Consensus 328 ~~~~~~ 333 (467)
T KOG1221|consen 328 LRYFEK 333 (467)
T ss_pred HHhccc
Confidence 988743
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=126.96 Aligned_cols=169 Identities=18% Similarity=0.217 Sum_probs=115.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++|+||||+|+||++++++|+++|++|++++|+.+... .....+ .++.++++|+++.+++.++++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~-~~~~~l----~~v~~~~~Dl~d~~~v~~~~~~~~~~~~ 98 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAR-EALAGI----DGVEVVMLDLADLESVRAFAERFLDSGR 98 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh----hhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence 46789999999999999999999999999999998754321 111111 237889999999998877663
Q ss_pred CCcEEEecCCCCCCCCC--Cc--h--------------------------------------------------------
Q 025065 79 GCDGVFHTASPVIFLSD--NP--Q-------------------------------------------------------- 98 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~--~~--~-------------------------------------------------------- 98 (258)
++|+|||+||....... .. .
T Consensus 99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~ 178 (315)
T PRK06196 99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKW 178 (315)
T ss_pred CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChH
Confidence 58999999997432110 00 0
Q ss_pred hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 99 EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 99 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
..|+.||.+.+.+++.++++ .|++++++|||.+.++....... ............ ..+....+..++|.|..++.
T Consensus 179 ~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~ 256 (315)
T PRK06196 179 LAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPR-EEQVALGWVDEH-GNPIDPGFKTPAQGAATQVW 256 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCCh-hhhhhhhhhhhh-hhhhhhhcCCHhHHHHHHHH
Confidence 14999999999998887654 48999999999999885432111 000000000000 00000124578999999999
Q ss_pred hhcCCC
Q 025065 176 ALEVPK 181 (258)
Q Consensus 176 ~~~~~~ 181 (258)
++..+.
T Consensus 257 l~~~~~ 262 (315)
T PRK06196 257 AATSPQ 262 (315)
T ss_pred HhcCCc
Confidence 987654
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=125.84 Aligned_cols=159 Identities=17% Similarity=0.135 Sum_probs=114.9
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++++++||||+|+||++++++|+++|++|++++|+.+.... ....+...+.++.++.+|++|.+++.++++
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~-~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDA-VADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3466899999999999999999999999999999997543211 111111113457889999999998887776
Q ss_pred -CCcEEEecCCCCCCCC--C---Cch------------------------------------------------hhHHHH
Q 025065 79 -GCDGVFHTASPVIFLS--D---NPQ------------------------------------------------EWYSLA 104 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~--~---~~~------------------------------------------------~~Y~~s 104 (258)
++|+|||+||...... . ... +.|+.+
T Consensus 116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~as 195 (293)
T PRK05866 116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNAS 195 (293)
T ss_pred CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHH
Confidence 6899999999753211 0 000 469999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
|.+.+.+++.++.+ +|+++++++||.+-++...... .. .....+..+++|+.++.++++.
T Consensus 196 Kaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~-----------~~-----~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 196 KAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK-----------AY-----DGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc-----------cc-----cCCCCCCHHHHHHHHHHHHhcC
Confidence 99999998888665 4899999999988665322100 00 1112468999999999999874
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.2e-16 Score=124.30 Aligned_cols=161 Identities=19% Similarity=0.129 Sum_probs=112.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--------C
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--------G 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~ 79 (258)
||++|||||+|+||++++++|+++|++|++++|+.+.... ...... ..++.++++|+++.+++.++++ +
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAA-LAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999999999987643211 111111 2468899999999988877654 4
Q ss_pred CcEEEecCCCCCCCC--C-Cch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS--D-NPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~--~-~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||...... . ... ..|+.+|...+
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~ 157 (260)
T PRK08267 78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVR 157 (260)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHH
Confidence 699999999853211 1 000 56999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+.+.++.+ .++++++++|+.+..+........ ....... .....+..+|++++++.+++.+
T Consensus 158 ~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~---~~~~~~~------~~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 158 GLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNE---VDAGSTK------RLGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHHHHHhcccCcEEEEEecCCcCCcccccccch---hhhhhHh------hccCCCCHHHHHHHHHHHHhCC
Confidence 998888754 479999999999876532210000 0001011 1111356799999999999754
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=121.46 Aligned_cols=174 Identities=19% Similarity=0.140 Sum_probs=117.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-------C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------D 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~ 78 (258)
+++++++||||+|+||++++++|.++|+.|++.+|+.++... ..... ..++.++.+|+++.+++.+++ .
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEA-LAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE 79 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999998888776533211 11111 246788999999998887764 3
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+|+....... ... ..|+.+|...
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~ 159 (245)
T PRK12936 80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGM 159 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHH
Confidence 58999999997532110 000 5699999988
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++.+ .++++++++|+.+..+...... . .......+. . ....+..++|+++++..++.... ..
T Consensus 160 ~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---~-~~~~~~~~~--~-~~~~~~~~~~ia~~~~~l~~~~~~~~~ 232 (245)
T PRK12936 160 IGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN---D-KQKEAIMGA--I-PMKRMGTGAEVASAVAYLASSEAAYVT 232 (245)
T ss_pred HHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC---h-HHHHHHhcC--C-CCCCCcCHHHHHHHHHHHcCccccCcC
Confidence 8888777654 4899999999988665322111 0 111111111 1 22336689999999998886543 24
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| .+...+
T Consensus 233 G~~~~~~~ 240 (245)
T PRK12936 233 GQTIHVNG 240 (245)
T ss_pred CCEEEECC
Confidence 5 455544
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.2e-15 Score=122.10 Aligned_cols=180 Identities=14% Similarity=0.086 Sum_probs=122.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCE-EEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|+|+||||+|+||+.++++|.++|++ |++++|+..+... ....+...+..+.++.+|+++++++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEA-QAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999998 9999887543221 111122223467889999999988877664
Q ss_pred -CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+++...... .... +.|+.+|.
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~ 162 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKG 162 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHH
Confidence 5899999999743211 0000 57999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCC---C-CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPI---L-NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~---~-~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
..|.+++.++.+. +++++.++|+.++++..... . .....++....... ....+.+++|+++++..++..
T Consensus 163 a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~l~~~ 238 (260)
T PRK06198 163 ALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ----PFGRLLDPDEVARAVAFLLSD 238 (260)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC----CccCCcCHHHHHHHHHHHcCh
Confidence 9999998887654 69999999999998753210 0 01111222211111 234578999999999999865
Q ss_pred CC--CCc-eEEEeC
Q 025065 180 PK--ASG-RYLLAG 190 (258)
Q Consensus 180 ~~--~~~-~~~~~~ 190 (258)
.. ..| .+...+
T Consensus 239 ~~~~~~G~~~~~~~ 252 (260)
T PRK06198 239 ESGLMTGSVIDFDQ 252 (260)
T ss_pred hhCCccCceEeECC
Confidence 43 345 444443
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=122.75 Aligned_cols=175 Identities=19% Similarity=0.142 Sum_probs=121.3
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+.+++|+||||+|+||++++++|.++|++|++++|+.+.... ....+.....++.++.+|+++++++.++++
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKE-LRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3567999999999999999999999999999999987643211 111111123468899999999988887765
Q ss_pred -CCcEEEecCCCCCCCC-CC-----------------------------------------ch----------------h
Q 025065 79 -GCDGVFHTASPVIFLS-DN-----------------------------------------PQ----------------E 99 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~-~~-----------------------------------------~~----------------~ 99 (258)
++|+|||+++...... .+ .. +
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~ 164 (258)
T PRK06949 85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG 164 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCcc
Confidence 5899999999632110 00 00 5
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 100 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.|+.+|...+.+++.++.+ .++++++++||.++++....... ...... .... . ....+...+|+++.+.++
T Consensus 165 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~-~~~~--~-~~~~~~~p~~~~~~~~~l 238 (258)
T PRK06949 165 LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE--TEQGQK-LVSM--L-PRKRVGKPEDLDGLLLLL 238 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC--hHHHHH-HHhc--C-CCCCCcCHHHHHHHHHHH
Confidence 7999999999999888765 48999999999999886432111 111111 1111 1 123466789999999999
Q ss_pred hcCCC--CCceE
Q 025065 177 LEVPK--ASGRY 186 (258)
Q Consensus 177 ~~~~~--~~~~~ 186 (258)
+.... ..|.+
T Consensus 239 ~~~~~~~~~G~~ 250 (258)
T PRK06949 239 AADESQFINGAI 250 (258)
T ss_pred hChhhcCCCCcE
Confidence 87532 45544
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-15 Score=122.31 Aligned_cols=162 Identities=15% Similarity=0.119 Sum_probs=112.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~ 82 (258)
+++|+||||||+|+||++++++|+++|++|+++.++..+.. +.+.. ..++.++.+|+++.+.+.+.+. .+|+
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~-~~l~~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 78 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAA-ERLAQ----ETGATAVQTDSADRDAVIDVVRKSGALDI 78 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHH-HHHHH----HhCCeEEecCCCCHHHHHHHHHHhCCCcE
Confidence 46789999999999999999999999999988766432211 11111 0135678899999888777664 4899
Q ss_pred EEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHHHHHH
Q 025065 83 VFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAEEAAW 113 (258)
Q Consensus 83 Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e~~~~ 113 (258)
|||+|+...... ..+. ..|+.+|.+.|.+++
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~ 158 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMAR 158 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHH
Confidence 999998743211 1010 679999999999998
Q ss_pred HHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 114 KFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 114 ~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.++.+ .|+++++++||.+..+...... . .. ...... . ....+..++|+++++..++...
T Consensus 159 ~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~-~~-~~~~~~--~-~~~~~~~p~~~a~~~~~l~s~~ 220 (237)
T PRK12742 159 GLARDFGPRGITINVVQPGPIDTDANPANG---P-MK-DMMHSF--M-AIKRHGRPEEVAGMVAWLAGPE 220 (237)
T ss_pred HHHHHHhhhCeEEEEEecCcccCCcccccc---H-HH-HHHHhc--C-CCCCCCCHHHHHHHHHHHcCcc
Confidence 87765 4799999999999776432111 1 11 111111 1 1223578999999999998754
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-15 Score=121.64 Aligned_cols=178 Identities=15% Similarity=0.168 Sum_probs=120.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++++||||+|+||++++++|+++|++|++++|+...... ...+. ..++.++++|+++.+++.++++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAA-VAASL---GERARFIATDITDDAAIERAVATVVARFG 79 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999997643211 11111 2468899999999988877664
Q ss_pred CCcEEEecCCCCCCCC--CCch----------------------------------------------hhHHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS--DNPQ----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~--~~~~----------------------------------------------~~Y~~sK~~~e~ 110 (258)
.+|++||+|+...... .... ..|+.+|...+.
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~ 159 (261)
T PRK08265 80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQ 159 (261)
T ss_pred CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHH
Confidence 5799999999743211 1100 579999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc-
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG- 184 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 184 (258)
+++.++.+ +|+++++++||.+.++................... .. ....+...+|+|+++..++..+. ..|
T Consensus 160 ~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~--~~-p~~r~~~p~dva~~~~~l~s~~~~~~tG~ 236 (261)
T PRK08265 160 LTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP--FH-LLGRVGDPEEVAQVVAFLCSDAASFVTGA 236 (261)
T ss_pred HHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc--cC-CCCCccCHHHHHHHHHHHcCccccCccCc
Confidence 99888765 48999999999987664221101001011111111 11 12235678999999999997542 345
Q ss_pred eEEEeC
Q 025065 185 RYLLAG 190 (258)
Q Consensus 185 ~~~~~~ 190 (258)
.+.+.+
T Consensus 237 ~i~vdg 242 (261)
T PRK08265 237 DYAVDG 242 (261)
T ss_pred EEEECC
Confidence 344443
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-15 Score=120.75 Aligned_cols=157 Identities=13% Similarity=0.162 Sum_probs=111.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCc-CCcEEEEEccCCCcccHHHHhC------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
++++|+||||+|+||++++++|+++| ++|++++|+.++...+..+++... ..+++++++|++|.+++.+.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 56899999999999999999999995 999999998764211111222111 2368999999999987665443
Q ss_pred CCcEEEecCCCCCCC---CCCc-------h----------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFL---SDNP-------Q----------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~---~~~~-------~----------------------------------------~~Y~~sK~~~ 108 (258)
++|++||++|..... ..+. . ..|+.+|...
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~ 166 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGL 166 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHH
Confidence 599999999885321 1111 0 4699999998
Q ss_pred HHHHHHHHH---HcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 109 EEAAWKFAK---ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 109 e~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
..+.+.+.. .+++++++++||.+..+..... .. ....+..+|+|+.++.++.++.
T Consensus 167 ~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~------------~~------~~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 167 DGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA------------KE------APLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred HHHHHHHHHHHhhcCCEEEEEeeCceecchhccC------------CC------CCCCCCHHHHHHHHHHHHHcCC
Confidence 877666543 4689999999999986532110 00 1124688999999999998753
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.4e-15 Score=117.87 Aligned_cols=176 Identities=20% Similarity=0.181 Sum_probs=122.2
Q ss_pred CCCCCCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-
Q 025065 2 MSGEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
|++.+++|+++||||+ +.||++++++|+++|++|++.+|+. +. .+.+.++. ...+.++++|++++++++++++
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~-~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~ 76 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RM-KKSLQKLV--DEEDLLVECDVASDESIERAFAT 76 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HH-HHHHHhhc--cCceeEEeCCCCCHHHHHHHHHH
Confidence 6666788999999999 7999999999999999999998863 21 12222221 2357889999999988876553
Q ss_pred ------CCcEEEecCCCCCCC-------CCCch---------------------------------------------hh
Q 025065 79 ------GCDGVFHTASPVIFL-------SDNPQ---------------------------------------------EW 100 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~~-------~~~~~---------------------------------------------~~ 100 (258)
++|++||+||..... ..... ..
T Consensus 77 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~ 156 (252)
T PRK06079 77 IKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNV 156 (252)
T ss_pred HHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchh
Confidence 489999999974310 11111 67
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 101 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
|+.+|...+.+++.++.+ +|+++..+.||.|-.+..... ........... ... ....+..++|+++++..++
T Consensus 157 Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~-~~~~~~~~~~~-~~~---p~~r~~~pedva~~~~~l~ 231 (252)
T PRK06079 157 MGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGI-KGHKDLLKESD-SRT---VDGVGVTIEEVGNTAAFLL 231 (252)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccC-CChHHHHHHHH-hcC---cccCCCCHHHHHHHHHHHh
Confidence 999999999999988865 489999999999977632211 11111222221 111 1223678899999999998
Q ss_pred cCC--CCCceE
Q 025065 178 EVP--KASGRY 186 (258)
Q Consensus 178 ~~~--~~~~~~ 186 (258)
... ...|..
T Consensus 232 s~~~~~itG~~ 242 (252)
T PRK06079 232 SDLSTGVTGDI 242 (252)
T ss_pred CcccccccccE
Confidence 753 335533
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.4e-15 Score=120.89 Aligned_cols=177 Identities=18% Similarity=0.130 Sum_probs=119.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++++++|||||+|+||++++++|.++|++|++++|+.+.... ....+...+.++.++.+|++|++++.++++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEE-AAAHLEALGIDALWIAADVADEADIERLAEETLERFG 88 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 457899999999999999999999999999999987543211 111111123467889999999988866553
Q ss_pred CCcEEEecCCCCCCC--CCCch-----------------------------------------------------hhHHH
Q 025065 79 GCDGVFHTASPVIFL--SDNPQ-----------------------------------------------------EWYSL 103 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~--~~~~~-----------------------------------------------------~~Y~~ 103 (258)
.+|+|||+|+..... ...+. ..|+.
T Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~ 168 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNT 168 (259)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHH
Confidence 589999999863211 00000 35999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...|.+++.++++ .++++.+++|+.+-++..... .......+..+. ....+...+|++.++..++...
T Consensus 169 sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~ 241 (259)
T PRK08213 169 SKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT---LERLGEDLLAHT----PLGRLGDDEDLKGAALLLASDA 241 (259)
T ss_pred HHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh---hHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999998775 479999999998876543221 122233333222 1223567899999988888654
Q ss_pred C--CCce-EEEeC
Q 025065 181 K--ASGR-YLLAG 190 (258)
Q Consensus 181 ~--~~~~-~~~~~ 190 (258)
. ..|. +.+.+
T Consensus 242 ~~~~~G~~~~~~~ 254 (259)
T PRK08213 242 SKHITGQILAVDG 254 (259)
T ss_pred ccCccCCEEEECC
Confidence 2 3453 34443
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.2e-15 Score=119.46 Aligned_cols=167 Identities=15% Similarity=0.109 Sum_probs=117.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++++||||+|.||++++++|.++|++|+++++.........+. .....+.++++|+++.+++.++++
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT---ALGRRFLSLTADLRKIDGIPALLERAVAEFG 84 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH---hcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5678999999999999999999999999999887654321112222 123467889999999988887765
Q ss_pred CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||....... ... ..|+.+|.+
T Consensus 85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa 164 (253)
T PRK08993 85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSG 164 (253)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHH
Confidence 48999999997532211 111 579999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+.+++.++.+ +|+++..++||.+-.+..... .........+.. . .| ...+.-.+|+++.++.++...
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~-~~~~~~~~~~~~-~--~p-~~r~~~p~eva~~~~~l~s~~ 235 (253)
T PRK08993 165 VMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL-RADEQRSAEILD-R--IP-AGRWGLPSDLMGPVVFLASSA 235 (253)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh-ccchHHHHHHHh-c--CC-CCCCcCHHHHHHHHHHHhCcc
Confidence 99999888766 589999999999977642211 001111111111 1 11 223678899999999999764
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-15 Score=120.66 Aligned_cols=154 Identities=16% Similarity=0.115 Sum_probs=111.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC-------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++||||+|+||++++++|+++|++|++++|++..... ....+.. ...++.++++|+++++++.++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEE-LKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999987643321 1111111 12468889999999988776554
Q ss_pred CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||....... ... +.|+.+|..
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a 160 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG 160 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence 58999999997432110 000 469999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+.+.+.+..+ .++++++++||.+.++..... + .....+..+|.|++++.++++.
T Consensus 161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-------------~-----~~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-------------K-----STPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-------------c-----cCCccCCHHHHHHHHHHHHhcC
Confidence 99988887765 379999999999976532210 0 1112567899999999999864
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.7e-15 Score=120.87 Aligned_cols=171 Identities=18% Similarity=0.151 Sum_probs=114.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCC--------
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC-------- 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------- 80 (258)
|+++||||+|+||++++++|+++|++|++++|+..+.... +.. ....++.++++|+++++++.++++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~-~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTK-LAE--QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHH-HHh--ccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 6899999999999999999999999999999876322111 111 11346889999999999888777531
Q ss_pred ---cEEEecCCCCCCC--CCC--ch------------------------------------------------hhHHHHH
Q 025065 81 ---DGVFHTASPVIFL--SDN--PQ------------------------------------------------EWYSLAK 105 (258)
Q Consensus 81 ---d~Vih~a~~~~~~--~~~--~~------------------------------------------------~~Y~~sK 105 (258)
.++||+||..... ..+ .. ..|+.+|
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 158 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK 158 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence 2789999874220 100 00 6799999
Q ss_pred HHHHHHHHHHHHH-----cCCcEEEEcCCccccCCcCC---CCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 106 TLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQP---ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 106 ~~~e~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
...+.+++.++.+ .++++..++||.+-.+.... ................ ....+..++|+|++++.++
T Consensus 159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~ 234 (251)
T PRK06924 159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK----EEGKLLSPEYVAKALRNLL 234 (251)
T ss_pred HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh----hcCCcCCHHHHHHHHHHHH
Confidence 9999999988765 36999999999886553111 0000000111111100 1113679999999999999
Q ss_pred cC-CCCCceE
Q 025065 178 EV-PKASGRY 186 (258)
Q Consensus 178 ~~-~~~~~~~ 186 (258)
.. ....|.+
T Consensus 235 ~~~~~~~G~~ 244 (251)
T PRK06924 235 ETEDFPNGEV 244 (251)
T ss_pred hcccCCCCCE
Confidence 87 3445543
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.8e-15 Score=125.27 Aligned_cols=83 Identities=24% Similarity=0.289 Sum_probs=64.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++++++||||+|+||.+++++|+++|++|++++|+..+... ...++......+.++.+|+++.+++.++++ +
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEA-AAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999987543221 112221113468899999999998887764 3
Q ss_pred CcEEEecCCCC
Q 025065 80 CDGVFHTASPV 90 (258)
Q Consensus 80 ~d~Vih~a~~~ 90 (258)
+|+|||+||..
T Consensus 84 iD~li~nAg~~ 94 (322)
T PRK07453 84 LDALVCNAAVY 94 (322)
T ss_pred ccEEEECCccc
Confidence 89999999963
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-15 Score=118.67 Aligned_cols=158 Identities=17% Similarity=0.112 Sum_probs=110.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCc--ccHHHHh-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEE--GSFDSAV----- 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~--~~~~~~~----- 77 (258)
|++++++||||+|+||++++++|.++|++|++++|+...... ...++.. ......++.+|+++. +++.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEK-VYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHH-HHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 467899999999999999999999999999999998743221 1111110 123467788998763 3343332
Q ss_pred ---CCCcEEEecCCCCCC----CCCCch-----------------------------------------------hhHHH
Q 025065 78 ---DGCDGVFHTASPVIF----LSDNPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 78 ---~~~d~Vih~a~~~~~----~~~~~~-----------------------------------------------~~Y~~ 103 (258)
..+|+|||+||.... ...... ..|+.
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 162 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGA 162 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHH
Confidence 458999999997421 111110 46999
Q ss_pred HHHHHHHHHHHHHHHc----CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 104 AKTLAEEAAWKFAKEN----GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 104 sK~~~e~~~~~~~~~~----~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+|...+.+++.++.+. ++++++++||.|+++...... .+. ....+...+|++.++..++..
T Consensus 163 sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 163 SKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH-----------PGE----AKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-----------CCC----CccccCCHHHHHHHHHHHhCc
Confidence 9999999998888764 599999999999988532110 111 112356889999999999874
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.8e-15 Score=118.54 Aligned_cols=178 Identities=15% Similarity=0.177 Sum_probs=122.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++|+||||+|+||++++++|.++|++|++++|+...... ...++.....++.++.+|+++.+++.+++.
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANH-VVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG 87 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999999886543211 111111113467889999999988876553
Q ss_pred CCcEEEecCCCCCCCCCC-c-h-----------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDN-P-Q-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~-~-~-----------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+|+.......+ . . ..|+.+|.+.+
T Consensus 88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 167 (255)
T PRK06113 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS 167 (255)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHH
Confidence 579999999975321111 1 0 67999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 184 (258)
.+++.++.+ .+++++++.||.+..+...... .+.......... ....+..++|+++++..++.... ..|
T Consensus 168 ~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~d~a~~~~~l~~~~~~~~~G 241 (255)
T PRK06113 168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHT----PIRRLGQPQDIANAALFLCSPAASWVSG 241 (255)
T ss_pred HHHHHHHHHhhhhCeEEEEEeccccccccccccc--CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCccccCccC
Confidence 999888764 4799999999999766422111 111222222221 22336799999999999987542 245
Q ss_pred -eEEEeC
Q 025065 185 -RYLLAG 190 (258)
Q Consensus 185 -~~~~~~ 190 (258)
.+.+.+
T Consensus 242 ~~i~~~g 248 (255)
T PRK06113 242 QILTVSG 248 (255)
T ss_pred CEEEECC
Confidence 444444
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-15 Score=124.55 Aligned_cols=172 Identities=21% Similarity=0.260 Sum_probs=116.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--------C
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--------G 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~ 79 (258)
+++++||||+|+||++++++|.++|++|++++|+++... .+.. .+++++.+|++|.+++.++++ .
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~--~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVA--ALEA-----EGLEAFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHH-----CCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999999999764321 1111 357889999999988776654 4
Q ss_pred CcEEEecCCCCCCCC--CCc-h-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS--DNP-Q-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~--~~~-~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||...... ..+ . +.|+.+|...|
T Consensus 77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 156 (277)
T PRK05993 77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIE 156 (277)
T ss_pred ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHH
Confidence 799999998753211 110 0 68999999999
Q ss_pred HHHHHHHH---HcCCcEEEEcCCccccCCcCCCCCcc-----------HHHHHHH---HcCCCCCCCCcceeeHHHHHHH
Q 025065 110 EAAWKFAK---ENGIDLVAIHPGTVIGPFFQPILNFG-----------AEVILNL---INGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 110 ~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~-----------~~~~~~~---~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
.+++.++. .+|+++++++||.+-.+......... ....... .... .. .....+.++++|+.
T Consensus 157 ~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~va~~ 234 (277)
T PRK05993 157 GLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGG-GS-KSRFKLGPEAVYAV 234 (277)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhh-hh-ccccCCCHHHHHHH
Confidence 99888764 36899999999999766422110000 0000000 0000 00 11113578999999
Q ss_pred HHHhhcCCCCCceEEE
Q 025065 173 HIRALEVPKASGRYLL 188 (258)
Q Consensus 173 ~~~~~~~~~~~~~~~~ 188 (258)
++.+++++.....|+.
T Consensus 235 i~~a~~~~~~~~~~~~ 250 (277)
T PRK05993 235 LLHALTAPRPRPHYRV 250 (277)
T ss_pred HHHHHcCCCCCCeeee
Confidence 9999988754444543
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.6e-15 Score=120.47 Aligned_cols=159 Identities=23% Similarity=0.233 Sum_probs=110.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--------CC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--------GC 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~~ 80 (258)
++|+||||+|+||+++++.|.++|++|++++|+.+... .... .+++.+++|+++.+++..+++ .+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~--~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~ 75 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVA--RMNS-----LGFTGILLDLDDPESVERAADEVIALTDNRL 75 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhH--HHHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999999999999999998764321 1111 246889999999887665442 46
Q ss_pred cEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 81 d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~e~ 110 (258)
|.++|++|....... ... +.|+.+|...|.
T Consensus 76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~ 155 (256)
T PRK08017 76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEA 155 (256)
T ss_pred eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHH
Confidence 899999986432110 000 469999999999
Q ss_pred HHHHHH---HHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCC-C--CCcceeeHHHHHHHHHHhhcCCCC
Q 025065 111 AAWKFA---KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF-A--FPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 111 ~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~--~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
+.+.++ ...+++++++|||.+.++........ ....+.. + ..+.+++++|+++++..+++++..
T Consensus 156 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 156 WSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT--------QSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred HHHHHHHHHhhcCCEEEEEeCCCcccchhhcccch--------hhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 877653 34589999999988765432211000 0000100 1 335689999999999999987654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.6e-15 Score=118.40 Aligned_cols=169 Identities=18% Similarity=0.151 Sum_probs=117.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc--CCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|+++||||+|.||++++++|.++|++|++++|+.+.... ....+... ..++.++.+|+++++++.++++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQ-ARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999987543221 11111111 2467889999999987766553
Q ss_pred --CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHH
Q 025065 79 --GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+|+...... .... +.|+.+|.
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~ 165 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKA 165 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHH
Confidence 5799999999742211 0100 67999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
..+.+++.++.+ .+++++.++||.+.++....... ............ ...-+...+|++.++..++...
T Consensus 166 a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~ 237 (257)
T PRK09242 166 ALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS-DPDYYEQVIERT----PMRRVGEPEEVAAAVAFLCMPA 237 (257)
T ss_pred HHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC-ChHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCcc
Confidence 999999888754 48999999999998875432211 122222222221 1122557899999999998653
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.8e-15 Score=119.08 Aligned_cols=168 Identities=18% Similarity=0.085 Sum_probs=115.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+|+++||||+|+||++++++|.++|++|++++|+...... ....+.....++.++++|+++++++.++++ .+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEE-AKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 4789999999999999999999999999999987643221 111111123468899999999988877653 57
Q ss_pred cEEEecCCCCCCC---CCCch------------------------------------------------hhHHHHHHHHH
Q 025065 81 DGVFHTASPVIFL---SDNPQ------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 81 d~Vih~a~~~~~~---~~~~~------------------------------------------------~~Y~~sK~~~e 109 (258)
|+|||++|..... ..... ..|+.+|...+
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~ 159 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL 159 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence 9999999863221 11110 46999999999
Q ss_pred HHHHHHHHH----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 110 EAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 110 ~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+++.++.+ +|+++..++||.+.+................+.... ....+...+|+++++..++...
T Consensus 160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~ 230 (252)
T PRK07677 160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSV----PLGRLGTPEEIAGLAYFLLSDE 230 (252)
T ss_pred HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccC----CCCCCCCHHHHHHHHHHHcCcc
Confidence 998887665 489999999999985421111001122222322221 1224678899999999888653
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-14 Score=119.63 Aligned_cols=192 Identities=17% Similarity=0.099 Sum_probs=125.5
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
+..+++++++||||+|+||++++++|+++|++|++.+++..........++...+.++.++++|+++.+.+.++++
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~ 86 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG 86 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3446789999999999999999999999999999988754332222222222223568899999999988877664
Q ss_pred --CCcEEEecCCCCCCCC---C-Cc-------------------------------------h----------------h
Q 025065 79 --GCDGVFHTASPVIFLS---D-NP-------------------------------------Q----------------E 99 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~---~-~~-------------------------------------~----------------~ 99 (258)
++|+|||+||...... . .. . .
T Consensus 87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 166 (306)
T PRK07792 87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQA 166 (306)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCc
Confidence 5899999999753210 0 00 0 4
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 100 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.|+.+|...+.+++.++.+ +|+++..+.|+. -.+......... ..... ...+.+.++|++.++..+
T Consensus 167 ~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~----~~~~~------~~~~~~~pe~va~~v~~L 235 (306)
T PRK07792 167 NYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDA----PDVEA------GGIDPLSPEHVVPLVQFL 235 (306)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhcccc----chhhh------hccCCCCHHHHHHHHHHH
Confidence 5999999999999888765 589999999973 111100000000 00000 123356899999999988
Q ss_pred hcCC--CCCc-eEEEeC-------------------CCcCHHHHHHHHHHh
Q 025065 177 LEVP--KASG-RYLLAG-------------------SVAQHSDILKFLREH 205 (258)
Q Consensus 177 ~~~~--~~~~-~~~~~~-------------------~~~t~~e~~~~i~~~ 205 (258)
+... ...| .+.+.+ ..++..|+.+.+.+.
T Consensus 236 ~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (306)
T PRK07792 236 ASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDY 286 (306)
T ss_pred cCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHH
Confidence 8653 2344 333222 346777777766665
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4e-15 Score=120.80 Aligned_cols=181 Identities=14% Similarity=0.086 Sum_probs=121.9
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC-
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
|....+++|++|||||+|.||++++++|+++|++|++++|+..+... ..+.+.. .+.++.++++|++++++++++++
T Consensus 1 ~~~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~ 79 (263)
T PRK08339 1 MLKIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKK-AREKIKSESNVDVSYIVADLTKREDLERTVKE 79 (263)
T ss_pred CCccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhhcCCceEEEEecCCCHHHHHHHHHH
Confidence 33344678999999999999999999999999999999987543221 1111111 12468899999999998887765
Q ss_pred -----CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHH
Q 025065 79 -----GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~ 103 (258)
++|++||+||...... .... ..|+.
T Consensus 80 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~a 159 (263)
T PRK08339 80 LKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNV 159 (263)
T ss_pred HHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHH
Confidence 4899999999743211 1111 56999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCC-------CC-ccHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI-------LN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~-------~~-~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
+|...+.+++.++.+ +|+++..+.||.+..+..... .. ........+ ... . ....+..++|+|.+
T Consensus 160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-p~~r~~~p~dva~~ 235 (263)
T PRK08339 160 VRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEY-AKP--I-PLGRLGEPEEIGYL 235 (263)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHH-hcc--C-CcccCcCHHHHHHH
Confidence 999999999888776 479999999999976531100 00 001111111 111 1 12346789999999
Q ss_pred HHHhhcCC--CCCceE
Q 025065 173 HIRALEVP--KASGRY 186 (258)
Q Consensus 173 ~~~~~~~~--~~~~~~ 186 (258)
+..++... ...|..
T Consensus 236 v~fL~s~~~~~itG~~ 251 (263)
T PRK08339 236 VAFLASDLGSYINGAM 251 (263)
T ss_pred HHHHhcchhcCccCce
Confidence 99998753 245533
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.5e-15 Score=109.10 Aligned_cols=157 Identities=22% Similarity=0.217 Sum_probs=120.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|||.|+||||.+|++|++++.++||+|++++|++++... .+++...+.|+.|++.+.+.+.+.|+||..-+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~---------~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~ 71 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA---------RQGVTILQKDIFDLTSLASDLAGHDAVISAFG 71 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc---------cccceeecccccChhhhHhhhcCCceEEEecc
Confidence 589999999999999999999999999999999876532 14678899999999999999999999998776
Q ss_pred CCCCCCCC-ch-------------------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEE
Q 025065 89 PVIFLSDN-PQ-------------------------------------------EWYSLAKTLAEEAAWKFAKENGIDLV 124 (258)
Q Consensus 89 ~~~~~~~~-~~-------------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ 124 (258)
........ .. ..|...+..+|.+ ..+..+.+++||
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L-~~Lr~~~~l~WT 150 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFL-DSLRAEKSLDWT 150 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHH-HHHhhccCcceE
Confidence 64211111 00 4566777777643 555556679999
Q ss_pred EEcCCccccCCcCCCCCccHHHHHHHHcCC-C-CCC-CCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 125 AIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA-FPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 125 ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~-~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
.+-|+..|-|+...+.. ..|+ . ... ..-++|...|.|-+++--++++....
T Consensus 151 fvSPaa~f~PGerTg~y---------rlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~r 204 (211)
T COG2910 151 FVSPAAFFEPGERTGNY---------RLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIR 204 (211)
T ss_pred EeCcHHhcCCccccCce---------EeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccc
Confidence 99999999997664421 2222 1 122 55689999999999999999987544
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-14 Score=115.10 Aligned_cols=167 Identities=17% Similarity=0.170 Sum_probs=116.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+|++|||||+|+||++++++|.++|++|++++|++.+.. ..+.. .++.++.+|+.+++++.++++ ++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI-DGLRQ-----AGAQCIQADFSTNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH-HHHHH-----cCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence 468999999999999999999999999999998764321 11111 236789999999988876653 48
Q ss_pred cEEEecCCCCCCC-CCCc--h-------------------------------------------------hhHHHHHHHH
Q 025065 81 DGVFHTASPVIFL-SDNP--Q-------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 81 d~Vih~a~~~~~~-~~~~--~-------------------------------------------------~~Y~~sK~~~ 108 (258)
|++||+||..... ..+. . ..|+.+|...
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal 155 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL 155 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence 9999999974221 1111 0 5699999999
Q ss_pred HHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-e
Q 025065 109 EEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-R 185 (258)
Q Consensus 109 e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~ 185 (258)
+.+++.++.+. ++++..++||.+..+... .......... +..++ -+..++|+++++..++......| .
T Consensus 156 ~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-----~~~~~~~~~~-~~~~~---~~~~~~~va~~~~~l~~~~~~~G~~ 226 (236)
T PRK06483 156 DNMTLSFAAKLAPEVKVNSIAPALILFNEGD-----DAAYRQKALA-KSLLK---IEPGEEEIIDLVDYLLTSCYVTGRS 226 (236)
T ss_pred HHHHHHHHHHHCCCcEEEEEccCceecCCCC-----CHHHHHHHhc-cCccc---cCCCHHHHHHHHHHHhcCCCcCCcE
Confidence 99999998874 599999999998532211 1111111111 11111 24578999999999997655566 3
Q ss_pred EEEe
Q 025065 186 YLLA 189 (258)
Q Consensus 186 ~~~~ 189 (258)
+.+.
T Consensus 227 i~vd 230 (236)
T PRK06483 227 LPVD 230 (236)
T ss_pred EEeC
Confidence 3333
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.2e-15 Score=118.90 Aligned_cols=168 Identities=20% Similarity=0.128 Sum_probs=118.2
Q ss_pred CCCcEEEEECCcc-hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-c-CCcEEEEEccCCCcccHHHHhC----
Q 025065 6 GEEKVVCVTGASG-FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-A-TERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
+++++++||||+| .||+++++.|.++|++|++.+|+...... ....+.. . ..++.++++|+++++++.++++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGE-TADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 3568999999998 69999999999999999998886543221 1111111 1 1357889999999988877664
Q ss_pred ---CCcEEEecCCCCCCCCCC--c-h------------------------------------------------hhHHHH
Q 025065 79 ---GCDGVFHTASPVIFLSDN--P-Q------------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~~~--~-~------------------------------------------------~~Y~~s 104 (258)
.+|+|||+||........ . . ..|+.+
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s 173 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAA 173 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHH
Confidence 579999999974221100 0 0 679999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
|.+.+.+++.++.+ +|+++++++|+.+..+...... .......+.... ....+..++|++++++.++...
T Consensus 174 Kaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~--~~~~~~~~~~~~----~~~r~~~p~~va~~~~~l~s~~ 246 (262)
T PRK07831 174 KAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT--SAELLDELAARE----AFGRAAEPWEVANVIAFLASDY 246 (262)
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc--CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCch
Confidence 99999999998876 5899999999999887533211 112222322222 1223668899999999988764
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.9e-15 Score=120.26 Aligned_cols=167 Identities=20% Similarity=0.248 Sum_probs=117.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------G 79 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~ 79 (258)
+++++++||||+|+||++++++|+++|++|++++|+...... ...++ ..+.++.++.+|++|++++.++++ .
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEA-LAARL-PYPGRHRWVVADLTSEAGREAVLARAREMGG 80 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCC
Confidence 357899999999999999999999999999999987543221 11111 123578899999999988776654 5
Q ss_pred CcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||...... .... ..|+.+|...+
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 160 (263)
T PRK09072 81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALR 160 (263)
T ss_pred CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHH
Confidence 799999999753211 1000 57999999998
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCceE
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRY 186 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~ 186 (258)
.+++.++.+ .++.++.+.||.+.++..... . ...... .......++|+|++++.++++.. .++|
T Consensus 161 ~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~-------~-~~~~~~----~~~~~~~~~~va~~i~~~~~~~~-~~~~ 227 (263)
T PRK09072 161 GFSEALRRELADTGVRVLYLAPRATRTAMNSEA-------V-QALNRA----LGNAMDDPEDVAAAVLQAIEKER-AERW 227 (263)
T ss_pred HHHHHHHHHhcccCcEEEEEecCcccccchhhh-------c-cccccc----ccCCCCCHHHHHHHHHHHHhCCC-CEEe
Confidence 888887765 479999999998866532110 0 000000 11235688999999999999763 3344
Q ss_pred E
Q 025065 187 L 187 (258)
Q Consensus 187 ~ 187 (258)
+
T Consensus 228 ~ 228 (263)
T PRK09072 228 L 228 (263)
T ss_pred c
Confidence 4
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.4e-15 Score=132.71 Aligned_cols=181 Identities=20% Similarity=0.165 Sum_probs=121.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+|+||++++++|.++|++|++++|+...... ....+.. ....+..+++|+++.+++.++++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~-~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEA-VAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999987543221 1111110 11356789999999998887765
Q ss_pred --CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK 105 (258)
++|+|||+||....... ... ..|+.+|
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSK 570 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAK 570 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHH
Confidence 58999999997532111 000 5799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccc-cCCcCCCCCc---------cHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVI-GPFFQPILNF---------GAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~-G~~~~~~~~~---------~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
.+.+.+++.++.+ .|+++..++|+.|+ |.+....... ...-......... ....+++++|+|++
T Consensus 571 aA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~---~l~r~v~peDVA~a 647 (676)
T TIGR02632 571 AAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRT---LLKRHIFPADIAEA 647 (676)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcC---CcCCCcCHHHHHHH
Confidence 9999999988776 47999999999987 3322111000 0000011111111 23457899999999
Q ss_pred HHHhhcCC--CCCc-eEEEeC
Q 025065 173 HIRALEVP--KASG-RYLLAG 190 (258)
Q Consensus 173 ~~~~~~~~--~~~~-~~~~~~ 190 (258)
+..++... ...| .+++++
T Consensus 648 v~~L~s~~~~~~TG~~i~vDG 668 (676)
T TIGR02632 648 VFFLASSKSEKTTGCIITVDG 668 (676)
T ss_pred HHHHhCCcccCCcCcEEEECC
Confidence 99988643 3345 345544
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-14 Score=119.07 Aligned_cols=171 Identities=19% Similarity=0.115 Sum_probs=117.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.++++++|||||+|.||.+++++|.++|++|++++|+...... ...++.. ...+..+.+|++|.+++.++++
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~-~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAA-LAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3567899999999999999999999999999999987543211 1111111 2346667799999988877653
Q ss_pred -CCcEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~ 108 (258)
.+|+|||+||...... .... ..|+.+|...
T Consensus 84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal 163 (296)
T PRK05872 84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGV 163 (296)
T ss_pred CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHHH
Confidence 5899999999753211 1111 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+++.++.+ .|+.++++.||.+..+......... .....+....+ . ....++.++|++++++.++...
T Consensus 164 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~-~~~~~~~~~~~-~-p~~~~~~~~~va~~i~~~~~~~ 235 (296)
T PRK05872 164 EAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADL-PAFRELRARLP-W-PLRRTTSVEKCAAAFVDGIERR 235 (296)
T ss_pred HHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccc-hhHHHHHhhCC-C-cccCCCCHHHHHHHHHHHHhcC
Confidence 9998887654 5899999999999776422211110 11122111110 0 2335678999999999998864
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1e-14 Score=116.76 Aligned_cols=165 Identities=17% Similarity=0.143 Sum_probs=112.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d 81 (258)
|++|||||+|+||++++++|+++|++|+++.|+..+.......+......++.++.+|+++++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 5799999999999999999999999999988833221111111121123468899999999988776654 489
Q ss_pred EEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHHHHH
Q 025065 82 GVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 82 ~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
+|||+++....... ... ..|+.+|...+.+
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~ 160 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF 160 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence 99999987432110 000 5699999998888
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
++.++++ .+++++.++|+.+.++..... .......+..+. ....+...+|+++++..++..+
T Consensus 161 ~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~l~~~~ 225 (242)
T TIGR01829 161 TKALAQEGATKGVTVNTISPGYIATDMVMAM---REDVLNSIVAQI----PVGRLGRPEEIAAAVAFLASEE 225 (242)
T ss_pred HHHHHHHhhhhCeEEEEEeeCCCcCcccccc---chHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCch
Confidence 8877654 489999999999988753321 112222222222 1223557799999998877654
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.9e-15 Score=118.11 Aligned_cols=167 Identities=17% Similarity=0.129 Sum_probs=112.0
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc--CCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+++||||+|+||+++++.|.++|++|++++|+..+........+... ...+..+++|+++++.+.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999987332211111111111 1234568899999998876654 57
Q ss_pred cEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 81 d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~e~ 110 (258)
|+|||+|+....... ... ..|+.+|...+.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 999999997543111 100 679999999999
Q ss_pred HHHHHHHHc-----CCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 111 AAWKFAKEN-----GIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 111 ~~~~~~~~~-----~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+++.++.+. +++++.++|+.+.++....... ........+..+. ....+.+++|++++++.++..+
T Consensus 161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~ 233 (251)
T PRK07069 161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV----PLGRLGEPDDVAHAVLYLASDE 233 (251)
T ss_pred HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC----CCCCCcCHHHHHHHHHHHcCcc
Confidence 998887652 4889999999998875432110 0011112222221 2234668999999999987654
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.7e-15 Score=119.18 Aligned_cols=173 Identities=21% Similarity=0.187 Sum_probs=116.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d 81 (258)
|+++||||+|+||++++++|++.|++|++++|+..... .....+.....++.++.+|+++++++.+++. .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAK-ETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999999999988743221 1112222223468899999999998877654 479
Q ss_pred EEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHHHHH
Q 025065 82 GVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 82 ~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~~e~ 110 (258)
+|||+++...... .... +.|+.+|...+.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 159 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG 159 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence 9999999743211 1110 579999999999
Q ss_pred HHHHHHHHc---CCcEEEEcCCccccCCcCCCCCc--------cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 111 AAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNF--------GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 111 ~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+++.++.+. ++.+++++||.+.++........ ........... . ....+..++|+++++..++..
T Consensus 160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~a~~~~~l~~~ 235 (254)
T TIGR02415 160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSE---I-ALGRPSEPEDVAGLVSFLASE 235 (254)
T ss_pred HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhh---C-CCCCCCCHHHHHHHHHhhccc
Confidence 998877663 79999999999866532110000 00000111100 0 123478899999999999987
Q ss_pred CC--CCceE
Q 025065 180 PK--ASGRY 186 (258)
Q Consensus 180 ~~--~~~~~ 186 (258)
+. ..|.+
T Consensus 236 ~~~~~~g~~ 244 (254)
T TIGR02415 236 DSDYITGQS 244 (254)
T ss_pred ccCCccCcE
Confidence 64 24544
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4e-15 Score=120.92 Aligned_cols=181 Identities=19% Similarity=0.112 Sum_probs=121.0
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc--CCcEEEEEccCCCcccHHHHhC
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
||...+++++++||||+|+||++++++|.++|++|++++|+.++... ....+... ..++..+.+|+++.+++.++++
T Consensus 1 m~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 79 (265)
T PRK07062 1 MMQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLAS-AEARLREKFPGARLLAARCDVLDEADVAAFAA 79 (265)
T ss_pred CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHHHhhCCCceEEEEEecCCCHHHHHHHHH
Confidence 67666788999999999999999999999999999999997644321 11111111 1357789999999988876553
Q ss_pred -------CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhH
Q 025065 79 -------GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWY 101 (258)
Q Consensus 79 -------~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y 101 (258)
++|+|||+||...... .... ..|
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y 159 (265)
T PRK07062 80 AVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVAT 159 (265)
T ss_pred HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHh
Confidence 4799999999743211 1100 579
Q ss_pred HHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC-----C--ccHHHHHHHHcCCCCCCCCcceeeHHHHHH
Q 025065 102 SLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL-----N--FGAEVILNLINGDQSFAFPYIFVEIRDVVY 171 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-----~--~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~ 171 (258)
+.+|...+.+++.++.+ .|++++.++||.+..+...... . ............. .. ....+...+|+|.
T Consensus 160 ~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-p~~r~~~p~~va~ 237 (265)
T PRK07062 160 SAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKK-GI-PLGRLGRPDEAAR 237 (265)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcC-CC-CcCCCCCHHHHHH
Confidence 99999988888877665 4899999999999765321100 0 0011111111101 11 1224668899999
Q ss_pred HHHHhhcCC--CCCc
Q 025065 172 AHIRALEVP--KASG 184 (258)
Q Consensus 172 ~~~~~~~~~--~~~~ 184 (258)
++..++... ...|
T Consensus 238 ~~~~L~s~~~~~~tG 252 (265)
T PRK07062 238 ALFFLASPLSSYTTG 252 (265)
T ss_pred HHHHHhCchhccccc
Confidence 999988753 2355
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.8e-14 Score=115.62 Aligned_cols=120 Identities=22% Similarity=0.204 Sum_probs=93.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----------
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---------- 78 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---------- 78 (258)
|++|||||+|+||++++++|.++|++|++++|+..+.. . .....++.++++|+.+.+++.+++.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~---~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL---A---AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh---h---hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence 57999999999999999999999999999998764321 1 1112468889999999988887432
Q ss_pred -CCcEEEecCCCCCCC--C--CCch-----------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFL--S--DNPQ-----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~--~--~~~~-----------------------------------------------~~Y~~sK~ 106 (258)
.+|++||+++..... . .... ..|+.+|.
T Consensus 76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 155 (243)
T PRK07023 76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKA 155 (243)
T ss_pred CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHH
Confidence 478999999975321 1 0110 57999999
Q ss_pred HHHHHHHHHHHH--cCCcEEEEcCCccccC
Q 025065 107 LAEEAAWKFAKE--NGIDLVAIHPGTVIGP 134 (258)
Q Consensus 107 ~~e~~~~~~~~~--~~~~~~ilRp~~v~G~ 134 (258)
..|.+++.++.+ .++++..++||.+-++
T Consensus 156 a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 156 ALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 999999988765 5899999999998654
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-14 Score=115.91 Aligned_cols=172 Identities=16% Similarity=0.096 Sum_probs=117.7
Q ss_pred EEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC---CcEEEecCC
Q 025065 12 CVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG---CDGVFHTAS 88 (258)
Q Consensus 12 lItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~Vih~a~ 88 (258)
|||||+|+||++++++|+++|++|++++|++..... ....+. ...+++++.+|+++++++.++++. +|++||+++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAA-AARALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 599999999999999999999999999987533211 111111 134688999999999999988863 799999999
Q ss_pred CCCCCC-C--Cch-------------------------------------------hhHHHHHHHHHHHHHHHHHHc-CC
Q 025065 89 PVIFLS-D--NPQ-------------------------------------------EWYSLAKTLAEEAAWKFAKEN-GI 121 (258)
Q Consensus 89 ~~~~~~-~--~~~-------------------------------------------~~Y~~sK~~~e~~~~~~~~~~-~~ 121 (258)
...... . ... +.|+.+|...+.+++.++.+. ++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~i 158 (230)
T PRK07041 79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAPV 158 (230)
T ss_pred CCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhhCc
Confidence 743211 0 000 679999999999999887664 68
Q ss_pred cEEEEcCCccccCCcCCCCCc-cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEe
Q 025065 122 DLVAIHPGTVIGPFFQPILNF-GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLA 189 (258)
Q Consensus 122 ~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~ 189 (258)
+++.++|+.+-++........ ....+....... ....+..++|+|+++..++..+...| .|.+.
T Consensus 159 rv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~ 224 (230)
T PRK07041 159 RVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERL----PARRVGQPEDVANAILFLAANGFTTGSTVLVD 224 (230)
T ss_pred eEEEEeecccccHHHHhhhccchHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhcCCCcCCcEEEeC
Confidence 999999998866532211010 111122222111 11235678999999999998765556 56544
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.8e-14 Score=115.35 Aligned_cols=173 Identities=17% Similarity=0.117 Sum_probs=116.1
Q ss_pred CCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCc-------cch---hhccccCcCCcEEEEEccCCCcccHH
Q 025065 7 EEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSP-------KTE---HLRELDGATERLHLFKANLLEEGSFD 74 (258)
Q Consensus 7 ~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~ 74 (258)
++++||||||+| .||.+++++|.++|++|++++|++.+. ... ....+.....++.++.+|+++.+++.
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 83 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN 83 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 568999999996 699999999999999999999873321 000 11111112346899999999998877
Q ss_pred HHhC-------CCcEEEecCCCCCCCC---CCch----------------------------------------------
Q 025065 75 SAVD-------GCDGVFHTASPVIFLS---DNPQ---------------------------------------------- 98 (258)
Q Consensus 75 ~~~~-------~~d~Vih~a~~~~~~~---~~~~---------------------------------------------- 98 (258)
++++ .+|+|||+|+...... ....
T Consensus 84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~ 163 (256)
T PRK12748 84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD 163 (256)
T ss_pred HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC
Confidence 6553 4799999998743211 1111
Q ss_pred -hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHH
Q 025065 99 -EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHI 174 (258)
Q Consensus 99 -~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~ 174 (258)
..|+.+|.+.+.+++.++.+ .+++++.++||.+..+..... ...... .. . ....+.-.+|+++++.
T Consensus 164 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~------~~~~~~-~~--~-~~~~~~~~~~~a~~~~ 233 (256)
T PRK12748 164 ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE------LKHHLV-PK--F-PQGRVGEPVDAARLIA 233 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh------HHHhhh-cc--C-CCCCCcCHHHHHHHHH
Confidence 57999999999998887765 489999999998876542211 111111 11 1 1122446799999999
Q ss_pred HhhcCCC--CCc-eEEEe
Q 025065 175 RALEVPK--ASG-RYLLA 189 (258)
Q Consensus 175 ~~~~~~~--~~~-~~~~~ 189 (258)
+++.... ..| .++..
T Consensus 234 ~l~~~~~~~~~g~~~~~d 251 (256)
T PRK12748 234 FLVSEEAKWITGQVIHSE 251 (256)
T ss_pred HHhCcccccccCCEEEec
Confidence 8887632 345 34443
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.7e-14 Score=115.92 Aligned_cols=167 Identities=15% Similarity=0.122 Sum_probs=115.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+++||||+|+||++++++|+++|++|++++|+.+.... ..... ..++.++++|+++++++.++++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 79 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLAS-LRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFG 79 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence 367899999999999999999999999999999987543211 11111 2457889999999988877654
Q ss_pred CCcEEEecCCCCCC--C----CCCc-----h-------------------------------------------hhHHHH
Q 025065 79 GCDGVFHTASPVIF--L----SDNP-----Q-------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ~~d~Vih~a~~~~~--~----~~~~-----~-------------------------------------------~~Y~~s 104 (258)
++|++||+||.... . ..+. . ..|+.+
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 159 (263)
T PRK06200 80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTAS 159 (263)
T ss_pred CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHH
Confidence 58999999997421 1 0010 0 469999
Q ss_pred HHHHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCC-C-------CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHH
Q 025065 105 KTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPI-L-------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHI 174 (258)
Q Consensus 105 K~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~-~-------~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~ 174 (258)
|...+.+++.++.+. ++++..+.||.+..+..... . ...... ....... . ....+..++|++.++.
T Consensus 160 K~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~-p~~r~~~~~eva~~~~ 235 (263)
T PRK06200 160 KHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGL-ADMIAAI--T-PLQFAPQPEDHTGPYV 235 (263)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccch-hHHhhcC--C-CCCCCCCHHHHhhhhh
Confidence 999999999888764 59999999999976632110 0 000001 1111111 1 2234778999999999
Q ss_pred HhhcCC
Q 025065 175 RALEVP 180 (258)
Q Consensus 175 ~~~~~~ 180 (258)
.++...
T Consensus 236 fl~s~~ 241 (263)
T PRK06200 236 LLASRR 241 (263)
T ss_pred heeccc
Confidence 998754
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=118.54 Aligned_cols=166 Identities=15% Similarity=0.099 Sum_probs=109.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcC-CcEEEEEccCCCcccHHHHhC-------CC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
|+++||||+|+||.+++++|.++|++|++++|+.+.... ...++.... ....++++|+++++++.++++ ++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQ-TVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999999999999886543211 111111111 234567899999988776554 47
Q ss_pred cEEEecCCCCCCCCC--Cc---------------------------------h----------------hhHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSD--NP---------------------------------Q----------------EWYSLAKTLAE 109 (258)
Q Consensus 81 d~Vih~a~~~~~~~~--~~---------------------------------~----------------~~Y~~sK~~~e 109 (258)
|+|||++|....... .. . ..|+.+|...+
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 159 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR 159 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence 999999987422110 00 0 57999999888
Q ss_pred HHHHHHHH---HcCCcEEEEcCCccccCCcCCCC----CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 110 EAAWKFAK---ENGIDLVAIHPGTVIGPFFQPIL----NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 110 ~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+.+.++. .+++++++++||.+.++...... ............. .....+..+|+|++++.++.++
T Consensus 160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-----FRGHAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-----cccCCCCHHHHHHHHHHHHhcC
Confidence 87776664 35899999999999887532210 0000011111110 1123578999999999999653
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.4e-15 Score=118.68 Aligned_cols=161 Identities=21% Similarity=0.173 Sum_probs=112.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++|+||||+|+||+++++.|.++|++|++++|++..... ....... ..++.++++|+++++++.++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKR-MKKTLSK-YGNIHYVVGDVSSTESARNVIEKAAKVLN 80 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 356899999999999999999999999999999997643211 1011111 1357889999999988876553
Q ss_pred CCcEEEecCCCCCCCC-----------------------------------------------CCchhhHHHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS-----------------------------------------------DNPQEWYSLAKTLAEEA 111 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~-----------------------------------------------~~~~~~Y~~sK~~~e~~ 111 (258)
++|.++|+++...... ......|+.+|...+.+
T Consensus 81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~ 160 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKA 160 (238)
T ss_pred CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHH
Confidence 4699999997532100 00015699999999988
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
++.++.+ .+++++++||++++++..... .+..... ....++..+|+++++..++..+
T Consensus 161 ~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~------~~~~~~~------~~~~~~~~~~va~~~~~~~~~~ 220 (238)
T PRK05786 161 VEILASELLGRGIRVNGIAPTTISGDFEPER------NWKKLRK------LGDDMAPPEDFAKVIIWLLTDE 220 (238)
T ss_pred HHHHHHHHhhcCeEEEEEecCccCCCCCchh------hhhhhcc------ccCCCCCHHHHHHHHHHHhccc
Confidence 8887765 489999999999998742210 0111000 1123567899999999999764
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.1e-14 Score=114.05 Aligned_cols=177 Identities=14% Similarity=0.076 Sum_probs=118.8
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC---CC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD---GC 80 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~---~~ 80 (258)
.+++|+++||||+|.||++++++|.++|++|++++|+..+... ...++.. ...++.++.+|+++++++.++++ ++
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 82 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEA-LAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDI 82 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCC
Confidence 3567999999999999999999999999999999987643221 1111111 12467889999999998887664 58
Q ss_pred cEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 81 d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e~ 110 (258)
|++||+++...... .... ..|+.+|...+.
T Consensus 83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~ 162 (259)
T PRK06125 83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMA 162 (259)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHH
Confidence 99999999753211 1111 457889999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCCC-------CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL-------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+++.++.+ .|++++.+.||.+..+...... .........+... . ....+..++|+|+++..++...
T Consensus 163 ~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~va~~~~~l~~~~ 238 (259)
T PRK06125 163 FTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAG---L-PLGRPATPEEVADLVAFLASPR 238 (259)
T ss_pred HHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhcc---C-CcCCCcCHHHHHHHHHHHcCch
Confidence 98887654 4899999999998766311000 0000111111111 1 1223678999999999998753
Q ss_pred --CCCceE
Q 025065 181 --KASGRY 186 (258)
Q Consensus 181 --~~~~~~ 186 (258)
...|..
T Consensus 239 ~~~~~G~~ 246 (259)
T PRK06125 239 SGYTSGTV 246 (259)
T ss_pred hccccCce
Confidence 235533
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-14 Score=114.57 Aligned_cols=122 Identities=26% Similarity=0.362 Sum_probs=94.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----CCcE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GCDG 82 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~ 82 (258)
|++++||||+|+||++++++|.++|++|++++|++.+.. .+... .++.++.+|+++++++.++++ ++|+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~id~ 74 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT--ALQAL----PGVHIEKLDMNDPASLDQLLQRLQGQRFDL 74 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH--HHHhc----cccceEEcCCCCHHHHHHHHHHhhcCCCCE
Confidence 368999999999999999999999999999999875432 12221 356788899999988877665 4899
Q ss_pred EEecCCCCCCCC-----CCch-------------------------------------------------hhHHHHHHHH
Q 025065 83 VFHTASPVIFLS-----DNPQ-------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 83 Vih~a~~~~~~~-----~~~~-------------------------------------------------~~Y~~sK~~~ 108 (258)
|||+||...... .... ..|+.+|.+.
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~ 154 (225)
T PRK08177 75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAAL 154 (225)
T ss_pred EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHH
Confidence 999998753211 0000 3599999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPF 135 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~ 135 (258)
+.+++.++.+ +++.+..++||.+-.+.
T Consensus 155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 155 NSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred HHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 9999888765 47899999999986654
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.8e-14 Score=114.71 Aligned_cols=164 Identities=20% Similarity=0.186 Sum_probs=110.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccH----HHHh------
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSF----DSAV------ 77 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~----~~~~------ 77 (258)
+.++||||+|+||++++++|.++|++|++++|+..+......+.+.. ....+.++.+|++|.+.+ .+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 47999999999999999999999999998876543222111222211 123466789999998754 2322
Q ss_pred -CCCcEEEecCCCCCC------CCCC-----------ch-----------------------------------------
Q 025065 78 -DGCDGVFHTASPVIF------LSDN-----------PQ----------------------------------------- 98 (258)
Q Consensus 78 -~~~d~Vih~a~~~~~------~~~~-----------~~----------------------------------------- 98 (258)
.++|+|||+||.... ...+ ..
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 358999999996321 1110 00
Q ss_pred ---------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeH
Q 025065 99 ---------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEI 166 (258)
Q Consensus 99 ---------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v 166 (258)
+.|+.+|...+.+++.++.+ +|++++.++||.+..+.... ...........+ ....+..+
T Consensus 162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~ 233 (267)
T TIGR02685 162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----FEVQEDYRRKVP---LGQREASA 233 (267)
T ss_pred hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----hhHHHHHHHhCC---CCcCCCCH
Confidence 57999999999999998766 58999999999987653221 111111111111 11235689
Q ss_pred HHHHHHHHHhhcCC
Q 025065 167 RDVVYAHIRALEVP 180 (258)
Q Consensus 167 ~D~a~~~~~~~~~~ 180 (258)
+|++.+++.++..+
T Consensus 234 ~~va~~~~~l~~~~ 247 (267)
T TIGR02685 234 EQIADVVIFLVSPK 247 (267)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999998764
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.7e-14 Score=115.35 Aligned_cols=162 Identities=15% Similarity=0.089 Sum_probs=113.3
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCcEE
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCDGV 83 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~V 83 (258)
|+||||+|+||.+++++|.++|++|++++|+..+........+...+.++.++++|+++.+++.++++ .+|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 68999999999999999999999999988765332222222222223568999999999988877654 47999
Q ss_pred EecCCCCCCCC---CCch------------------------------------------------hhHHHHHHHHHHHH
Q 025065 84 FHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 84 ih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
||+++...... .... ..|+.+|...+.+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 160 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT 160 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence 99999753211 0100 57999999998888
Q ss_pred HHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 113 WKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 113 ~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.++.+ .|++++.++|+.+.++..... ........... ....+...+|+++++.+++..+
T Consensus 161 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~~~~ 223 (239)
T TIGR01831 161 KALAVELAKRKITVNCIAPGLIDTEMLAEV----EHDLDEALKTV----PMNRMGQPAEVASLAGFLMSDG 223 (239)
T ss_pred HHHHHHHhHhCeEEEEEEEccCccccchhh----hHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCch
Confidence 877655 489999999999987753321 11111222111 1223568899999999999864
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.5e-14 Score=126.18 Aligned_cols=177 Identities=16% Similarity=0.150 Sum_probs=121.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
.+|++|||||+|.||.+++++|.++|++|++++|+...... ..... ...+..+.+|++|++++.++++ .
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKK-LAEAL---GDEHLSVQADITDEAAVESAFAQIQARWGR 343 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999987533211 11111 2356778999999988887664 4
Q ss_pred CcEEEecCCCCCC--C--CCCch---------------------------------------------hhHHHHHHHHHH
Q 025065 80 CDGVFHTASPVIF--L--SDNPQ---------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 80 ~d~Vih~a~~~~~--~--~~~~~---------------------------------------------~~Y~~sK~~~e~ 110 (258)
+|++||+||.... . ..... ..|+.+|...+.
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~ 423 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTM 423 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHH
Confidence 7999999997532 1 11111 679999999999
Q ss_pred HHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc-
Q 025065 111 AAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG- 184 (258)
Q Consensus 111 ~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 184 (258)
+++.++.+. |++++.+.||.|.++...............+.... ....+..++|+|++++.++.... ..|
T Consensus 424 l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dia~~~~~l~s~~~~~~~G~ 499 (520)
T PRK06484 424 LSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRI----PLGRLGDPEEVAEAIAFLASPAASYVNGA 499 (520)
T ss_pred HHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCccCc
Confidence 999887653 79999999999987643211110111112222211 12235789999999999987542 455
Q ss_pred eEEEeCC
Q 025065 185 RYLLAGS 191 (258)
Q Consensus 185 ~~~~~~~ 191 (258)
.+.+.+.
T Consensus 500 ~i~vdgg 506 (520)
T PRK06484 500 TLTVDGG 506 (520)
T ss_pred EEEECCC
Confidence 4455544
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.8e-14 Score=114.05 Aligned_cols=182 Identities=18% Similarity=0.133 Sum_probs=119.6
Q ss_pred CCCCCCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-
Q 025065 2 MSGEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
|...|++|++|||||++ .||++++++|+++|++|++.+|+.... +...++.........+++|++|++++.++++
T Consensus 1 ~~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~--~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~ 78 (271)
T PRK06505 1 MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG--KRVKPLAESLGSDFVLPCDVEDIASVDAVFEA 78 (271)
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH--HHHHHHHHhcCCceEEeCCCCCHHHHHHHHHH
Confidence 34446779999999997 999999999999999999988764221 1111111100123468999999988877653
Q ss_pred ------CCcEEEecCCCCCCC-------CCCch---------------------------------------------hh
Q 025065 79 ------GCDGVFHTASPVIFL-------SDNPQ---------------------------------------------EW 100 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~~-------~~~~~---------------------------------------------~~ 100 (258)
.+|++||+||..... ..... ..
T Consensus 79 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~ 158 (271)
T PRK06505 79 LEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNV 158 (271)
T ss_pred HHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccch
Confidence 489999999975321 01111 57
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 101 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
|+.+|...+.+++.++.+ +|+++..+.||.+-.+..... ..... ......... | ...+..++|+|++++.++
T Consensus 159 Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~-~~~~~-~~~~~~~~~--p-~~r~~~peeva~~~~fL~ 233 (271)
T PRK06505 159 MGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGI-GDARA-IFSYQQRNS--P-LRRTVTIDEVGGSALYLL 233 (271)
T ss_pred hhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccC-cchHH-HHHHHhhcC--C-ccccCCHHHHHHHHHHHh
Confidence 999999999999888876 489999999999977642211 11101 111111111 1 123568899999999998
Q ss_pred cCCC--CCceE-EEeC
Q 025065 178 EVPK--ASGRY-LLAG 190 (258)
Q Consensus 178 ~~~~--~~~~~-~~~~ 190 (258)
.... ..|.. .+.+
T Consensus 234 s~~~~~itG~~i~vdg 249 (271)
T PRK06505 234 SDLSSGVTGEIHFVDS 249 (271)
T ss_pred CccccccCceEEeecC
Confidence 7532 35543 4443
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-13 Score=112.08 Aligned_cols=170 Identities=15% Similarity=0.076 Sum_probs=115.4
Q ss_pred CCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCcc-chhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPK-TEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
+++|+++||||+ +.||++++++|.++|++|++..|+.+... .+.+.++......+.++++|++|++++.++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 367899999986 79999999999999999988876543221 12222222212346788999999998887654
Q ss_pred ---CCcEEEecCCCCCC-----C--CCCch---------------------------------------------hhHHH
Q 025065 79 ---GCDGVFHTASPVIF-----L--SDNPQ---------------------------------------------EWYSL 103 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~-----~--~~~~~---------------------------------------------~~Y~~ 103 (258)
++|++||+||.... . ..... ..|+.
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~a 163 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGV 163 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhhH
Confidence 48999999997431 1 11111 56999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+.+.++.+ +|+++..+.||.+-.+..... ............ . . ....+...+|++.++..++..+
T Consensus 164 sKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~~~~~~~~~~~~-~--~-p~~r~~~~~dva~~~~fl~s~~ 238 (258)
T PRK07370 164 AKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-GGILDMIHHVEE-K--A-PLRRTVTQTEVGNTAAFLLSDL 238 (258)
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-ccchhhhhhhhh-c--C-CcCcCCCHHHHHHHHHHHhChh
Confidence 999999999988876 479999999999976532111 001111111111 1 1 1224667899999999998753
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.4e-13 Score=109.99 Aligned_cols=175 Identities=15% Similarity=0.094 Sum_probs=117.7
Q ss_pred CCCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhh-ccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 5 EGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHL-RELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
.+++|+++||||+ +.||++++++|.++|++|++.+|+...... +.+ .++. ..++.++++|++|+++++++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 81 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFETI 81 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHHH
Confidence 3578999999997 899999999999999999998875422211 111 1111 2457889999999988877653
Q ss_pred -----CCcEEEecCCCCCC----C---CCCch---------------------------------------------hhH
Q 025065 79 -----GCDGVFHTASPVIF----L---SDNPQ---------------------------------------------EWY 101 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~----~---~~~~~---------------------------------------------~~Y 101 (258)
++|++||+|+.... . ..... ..|
T Consensus 82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y 161 (257)
T PRK08594 82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVM 161 (257)
T ss_pred HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchh
Confidence 48999999987431 0 11111 679
Q ss_pred HHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 102 SLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+.+|...+.+.+.++.+ +|+++..+.||.+..+....... ....... .... . ....+..++|+++++.+++.
T Consensus 162 ~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~-~~~~--~-p~~r~~~p~~va~~~~~l~s 236 (257)
T PRK08594 162 GVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG-FNSILKE-IEER--A-PLRRTTTQEEVGDTAAFLFS 236 (257)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc-ccHHHHH-Hhhc--C-CccccCCHHHHHHHHHHHcC
Confidence 99999999999888765 47999999999997653211000 0011111 1111 1 12235789999999999987
Q ss_pred CCC--CCceE
Q 025065 179 VPK--ASGRY 186 (258)
Q Consensus 179 ~~~--~~~~~ 186 (258)
... ..|..
T Consensus 237 ~~~~~~tG~~ 246 (257)
T PRK08594 237 DLSRGVTGEN 246 (257)
T ss_pred cccccccceE
Confidence 542 35543
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.6e-14 Score=112.56 Aligned_cols=159 Identities=18% Similarity=0.230 Sum_probs=108.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCC--CcccHHHH------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLL--EEGSFDSA------ 76 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~--~~~~~~~~------ 76 (258)
+++++|+||||+|+||.+++++|+++|++|++++|+..+... ...++.. ...++.++.+|++ +.+++.++
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEA-VYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHH-HHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999997643221 1111111 1235677888886 44443333
Q ss_pred -hCCCcEEEecCCCCCCC----CCCch-----------------------------------------------hhHHHH
Q 025065 77 -VDGCDGVFHTASPVIFL----SDNPQ-----------------------------------------------EWYSLA 104 (258)
Q Consensus 77 -~~~~d~Vih~a~~~~~~----~~~~~-----------------------------------------------~~Y~~s 104 (258)
+..+|+|||+|+..... ..... ..|+.+
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 168 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVS 168 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHH
Confidence 34689999999874321 11111 579999
Q ss_pred HHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 105 KTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
|...+.+++.++.+. ++++++++|+.+-++...... ... ....+.-.+|++..+..++...
T Consensus 169 K~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 169 KFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF-----------PGE----DPQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred HHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc-----------Ccc----cccCCCCHHHHHHHHHHHhCcc
Confidence 999999998887664 689999999988654211100 000 1123567899999999988654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5e-14 Score=114.54 Aligned_cols=163 Identities=18% Similarity=0.163 Sum_probs=113.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+++||||+|+||++++++|+++|++|++++|+..... ..++.++++|+++++++.++++
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEIIEKFG 76 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999988764431 1357889999999988877654
Q ss_pred CCcEEEecCCCCCCCC------------CCch-----------------------------------------------h
Q 025065 79 GCDGVFHTASPVIFLS------------DNPQ-----------------------------------------------E 99 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~------------~~~~-----------------------------------------------~ 99 (258)
.+|+|||+||...... .... .
T Consensus 77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 156 (266)
T PRK06171 77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQS 156 (266)
T ss_pred CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCc
Confidence 4799999999742210 0000 6
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccc-cCCcCCCCC---------ccHHHHHHHHcCCCCCCCCcceeeH
Q 025065 100 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVI-GPFFQPILN---------FGAEVILNLINGDQSFAFPYIFVEI 166 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~-G~~~~~~~~---------~~~~~~~~~~~g~~~~~~~~~~i~v 166 (258)
.|+.+|...+.+++.++.+ .|+++.+++||.+. .+....... ........+... ...| ...+...
T Consensus 157 ~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-~~r~~~~ 234 (266)
T PRK06171 157 CYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKT-STIP-LGRSGKL 234 (266)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccc-cccc-CCCCCCH
Confidence 7999999999999888765 48999999999884 221110000 000111111110 0111 2346788
Q ss_pred HHHHHHHHHhhcCC
Q 025065 167 RDVVYAHIRALEVP 180 (258)
Q Consensus 167 ~D~a~~~~~~~~~~ 180 (258)
+|+|.++..++...
T Consensus 235 ~eva~~~~fl~s~~ 248 (266)
T PRK06171 235 SEVADLVCYLLSDR 248 (266)
T ss_pred HHhhhheeeeeccc
Confidence 99999999988753
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.5e-14 Score=117.82 Aligned_cols=128 Identities=20% Similarity=0.213 Sum_probs=93.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
++|+|+||||+|+||++++++|+++|++|++++|+.++... ....+.. ....+.++.+|+++.+++.++++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKA-AAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 56899999999999999999999999999999987543221 1111111 12467899999999998877654
Q ss_pred -CCcEEEecCCCCCCCC----CCch-------------------------------------------------------
Q 025065 79 -GCDGVFHTASPVIFLS----DNPQ------------------------------------------------------- 98 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~----~~~~------------------------------------------------------- 98 (258)
++|+|||+||...... ....
T Consensus 94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~ 173 (306)
T PRK06197 94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN 173 (306)
T ss_pred CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC
Confidence 4899999999742211 1000
Q ss_pred --hhHHHHHHHHHHHHHHHHHHc---CCcEEE--EcCCccccCC
Q 025065 99 --EWYSLAKTLAEEAAWKFAKEN---GIDLVA--IHPGTVIGPF 135 (258)
Q Consensus 99 --~~Y~~sK~~~e~~~~~~~~~~---~~~~~i--lRp~~v~G~~ 135 (258)
..|+.+|++.+.+++.++.+. ++++++ +.||.|..+.
T Consensus 174 ~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 174 RVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 259999999999998887653 555554 5799987664
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.5e-14 Score=113.07 Aligned_cols=173 Identities=17% Similarity=0.065 Sum_probs=116.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d 81 (258)
|++|||||+|.||++++++|.++|++|++++|+...... ...++.. ..++.++++|+++++++.++++ ++|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEK-ALKELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 479999999999999999999999999999987543211 1111111 1357889999999988887663 589
Q ss_pred EEEecCCCCCC-----CCCCch------------------------------------------------hhHHHHHHHH
Q 025065 82 GVFHTASPVIF-----LSDNPQ------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 82 ~Vih~a~~~~~-----~~~~~~------------------------------------------------~~Y~~sK~~~ 108 (258)
+|||+||.... ...... ..|+.+|...
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~ 158 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGL 158 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHH
Confidence 99999997421 110000 5799999999
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCC--------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
+.+++.++.+. |+++..+.||.+-.+....... ............. . ....+..++|+|+++..++
T Consensus 159 ~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-p~~r~~~p~dva~~~~fL~ 235 (259)
T PRK08340 159 VQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER--T-PLKRTGRWEELGSLIAFLL 235 (259)
T ss_pred HHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc--C-CccCCCCHHHHHHHHHHHc
Confidence 99999988764 7999999999987664211000 0000001111111 1 1223678999999999998
Q ss_pred cCC--CCCceE
Q 025065 178 EVP--KASGRY 186 (258)
Q Consensus 178 ~~~--~~~~~~ 186 (258)
..+ ...|..
T Consensus 236 s~~~~~itG~~ 246 (259)
T PRK08340 236 SENAEYMLGST 246 (259)
T ss_pred CcccccccCce
Confidence 854 345533
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.6e-14 Score=114.49 Aligned_cols=167 Identities=14% Similarity=0.081 Sum_probs=114.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++++++||||+|+||++++++|+++|++|++++|+.+... .+.. ....++.++++|+++.+++.++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ--ELEA--AHGDAVVGVEGDVRSLDDHKEAVARCVAAFG 78 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHh--hcCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999998753321 1111 112457889999999887776554
Q ss_pred CCcEEEecCCCCCC--C--C-CC------ch-------------------------------------------hhHHHH
Q 025065 79 GCDGVFHTASPVIF--L--S-DN------PQ-------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ~~d~Vih~a~~~~~--~--~-~~------~~-------------------------------------------~~Y~~s 104 (258)
++|++||+||.... . . .. .. ..|+.+
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 158 (262)
T TIGR03325 79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAA 158 (262)
T ss_pred CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHH
Confidence 57999999986321 0 0 00 00 479999
Q ss_pred HHHHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCC-C--Ccc---HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 105 KTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPI-L--NFG---AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 105 K~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~-~--~~~---~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
|...+.+++.++.+. ++++..+.||.+..+..... . ... ........... . ....+...+|+|++++.+
T Consensus 159 Kaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-p~~r~~~p~eva~~~~~l 235 (262)
T TIGR03325 159 KHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV--L-PIGRMPDAEEYTGAYVFF 235 (262)
T ss_pred HHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc--C-CCCCCCChHHhhhheeee
Confidence 999999999998774 38999999999987642211 0 000 00011111111 1 123466889999999998
Q ss_pred hcC
Q 025065 177 LEV 179 (258)
Q Consensus 177 ~~~ 179 (258)
+..
T Consensus 236 ~s~ 238 (262)
T TIGR03325 236 ATR 238 (262)
T ss_pred ecC
Confidence 875
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.3e-14 Score=108.33 Aligned_cols=138 Identities=20% Similarity=0.196 Sum_probs=104.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CCcEEEe
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDGVFH 85 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~Vih 85 (258)
|+++||||+|.||++++++|.++ ++|++++|+.. .+++|++++++++++++ ++|+|||
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~id~lv~ 61 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEKVGKVDAVVS 61 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcCCCCEEEE
Confidence 37999999999999999999998 99999988641 35789999999888776 5899999
Q ss_pred cCCCCCCCC---CCch---------------------------------------------hhHHHHHHHHHHHHHHHHH
Q 025065 86 TASPVIFLS---DNPQ---------------------------------------------EWYSLAKTLAEEAAWKFAK 117 (258)
Q Consensus 86 ~a~~~~~~~---~~~~---------------------------------------------~~Y~~sK~~~e~~~~~~~~ 117 (258)
+||...... .... ..|+.+|...+.+.+.++.
T Consensus 62 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~ 141 (199)
T PRK07578 62 AAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAAL 141 (199)
T ss_pred CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 999743211 1111 5799999999999988877
Q ss_pred H--cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 118 E--NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 118 ~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+ .|+++..+.||.+-.+... ..+. + ....++.++|+|+++..+++...
T Consensus 142 e~~~gi~v~~i~Pg~v~t~~~~---------~~~~------~-~~~~~~~~~~~a~~~~~~~~~~~ 191 (199)
T PRK07578 142 ELPRGIRINVVSPTVLTESLEK---------YGPF------F-PGFEPVPAARVALAYVRSVEGAQ 191 (199)
T ss_pred HccCCeEEEEEcCCcccCchhh---------hhhc------C-CCCCCCCHHHHHHHHHHHhccce
Confidence 5 5899999999988433210 0010 1 12236789999999999998653
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-13 Score=117.74 Aligned_cols=82 Identities=22% Similarity=0.242 Sum_probs=65.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+++|+++||||+|+||++++++|.++|++|++++|+.+.... ... .....+..+.+|++|.+.+.+.+.++|++||
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~-~~~---~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn 251 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITL-EIN---GEDLPVKTLHWQVGQEAALAELLEKVDILII 251 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHh---hcCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence 467899999999999999999999999999999987543211 111 1112467889999999999999999999999
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
+||...
T Consensus 252 nAGi~~ 257 (406)
T PRK07424 252 NHGINV 257 (406)
T ss_pred CCCcCC
Confidence 999753
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-13 Score=111.14 Aligned_cols=81 Identities=19% Similarity=0.094 Sum_probs=64.3
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.+++++++||||+|+||++++++|+++|++|++++|+..+.... . . . .....+.+|+++.+++.+.+.++|++|
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~-~--~-~--~~~~~~~~D~~~~~~~~~~~~~iDilV 84 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES-N--D-E--SPNEWIKWECGKEESLDKQLASLDVLI 84 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh-h--c-c--CCCeEEEeeCCCHHHHHHhcCCCCEEE
Confidence 35678999999999999999999999999999999876221111 0 0 0 112568899999999999888999999
Q ss_pred ecCCCCC
Q 025065 85 HTASPVI 91 (258)
Q Consensus 85 h~a~~~~ 91 (258)
|+||...
T Consensus 85 nnAG~~~ 91 (245)
T PRK12367 85 LNHGINP 91 (245)
T ss_pred ECCccCC
Confidence 9999753
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-13 Score=110.90 Aligned_cols=174 Identities=17% Similarity=0.100 Sum_probs=117.0
Q ss_pred CCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
|++|+++||||++ .||++++++|+++|++|++.+|+. +. .+..+++.........+.+|++|+++++++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 81 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL-KGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV 81 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hH-HHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence 5678999999985 999999999999999999888763 11 11122222112345678999999998887663
Q ss_pred --CCcEEEecCCCCCCCC--------CCch---------------------------------------------hhHHH
Q 025065 79 --GCDGVFHTASPVIFLS--------DNPQ---------------------------------------------EWYSL 103 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~--------~~~~---------------------------------------------~~Y~~ 103 (258)
++|++||+||...... .... ..|+.
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~a 161 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGL 161 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHH
Confidence 4799999999743211 0000 57999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+++.++.+ +|+++..+-||.+..+..... ............ .. ....+..++|++.++.+++...
T Consensus 162 sKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~~~~~~~~~~~-~~---p~~r~~~pedva~~~~~L~s~~ 236 (262)
T PRK07984 162 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEA-VT---PIRRTVTIEDVGNSAAFLCSDL 236 (262)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC-CchHHHHHHHHH-cC---CCcCCCCHHHHHHHHHHHcCcc
Confidence 999999999988876 489999999999976421110 111111111111 11 1224678899999999998753
Q ss_pred --CCCceE
Q 025065 181 --KASGRY 186 (258)
Q Consensus 181 --~~~~~~ 186 (258)
...|..
T Consensus 237 ~~~itG~~ 244 (262)
T PRK07984 237 SAGISGEV 244 (262)
T ss_pred cccccCcE
Confidence 245543
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-13 Score=108.70 Aligned_cols=154 Identities=18% Similarity=0.175 Sum_probs=109.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh---CCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV---DGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~V 83 (258)
|+++||||+|+||++++++|.++| ..|+...|+.... . ...++.++++|+++.++++++. .++|+|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~-----~~~~~~~~~~Dls~~~~~~~~~~~~~~id~l 71 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----F-----QHDNVQWHALDVTDEAEIKQLSEQFTQLDWL 71 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----c-----ccCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 479999999999999999999985 5666656544221 0 0246788999999998877654 468999
Q ss_pred EecCCCCCCCC---------CCch--------------------------------------------------hhHHHH
Q 025065 84 FHTASPVIFLS---------DNPQ--------------------------------------------------EWYSLA 104 (258)
Q Consensus 84 ih~a~~~~~~~---------~~~~--------------------------------------------------~~Y~~s 104 (258)
||+||...... .+.. ..|+.+
T Consensus 72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~as 151 (235)
T PRK09009 72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRAS 151 (235)
T ss_pred EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhh
Confidence 99999853210 0000 269999
Q ss_pred HHHHHHHHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 105 KTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 105 K~~~e~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
|...+.+++.++.+ .++.+..+.||.+.++.... ..... ....+...+|+|++++.++..
T Consensus 152 K~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~~----~~~~~~~~~~~a~~~~~l~~~ 216 (235)
T PRK09009 152 KAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP-----------FQQNV----PKGKLFTPEYVAQCLLGIIAN 216 (235)
T ss_pred HHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc-----------hhhcc----ccCCCCCHHHHHHHHHHHHHc
Confidence 99999999888765 37889999999987664221 00111 122367899999999999987
Q ss_pred CC--CCceE
Q 025065 180 PK--ASGRY 186 (258)
Q Consensus 180 ~~--~~~~~ 186 (258)
.. ..|.+
T Consensus 217 ~~~~~~g~~ 225 (235)
T PRK09009 217 ATPAQSGSF 225 (235)
T ss_pred CChhhCCcE
Confidence 53 35544
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.2e-13 Score=109.36 Aligned_cols=173 Identities=16% Similarity=0.094 Sum_probs=116.5
Q ss_pred CCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|+++||||+ +.||.+++++|+++|++|++.+|+.... +.+.++........++++|+++.+++.++++
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 85 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR--PYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE 85 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH--HHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence 467899999998 5999999999999999999998875321 1111111111234678999999988877653
Q ss_pred --CCcEEEecCCCCCCC-------CCCch---------------------------------------------hhHHHH
Q 025065 79 --GCDGVFHTASPVIFL-------SDNPQ---------------------------------------------EWYSLA 104 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~-------~~~~~---------------------------------------------~~Y~~s 104 (258)
++|++||+||..... ..... ..|+.+
T Consensus 86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~as 165 (258)
T PRK07533 86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPV 165 (258)
T ss_pred cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhHHH
Confidence 479999999974321 01111 569999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
|...+.+.+.++.+ +|+++..+.||.+-.+..... .............. ....+..++|++.+++.++...
T Consensus 166 Kaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~----p~~r~~~p~dva~~~~~L~s~~~ 240 (258)
T PRK07533 166 KAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI-DDFDALLEDAAERA----PLRRLVDIDDVGAVAAFLASDAA 240 (258)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc-CCcHHHHHHHHhcC----CcCCCCCHHHHHHHHHHHhChhh
Confidence 99999998888765 489999999999976532211 11111122222211 1223678899999999998753
Q ss_pred -CCCce
Q 025065 181 -KASGR 185 (258)
Q Consensus 181 -~~~~~ 185 (258)
...|.
T Consensus 241 ~~itG~ 246 (258)
T PRK07533 241 RRLTGN 246 (258)
T ss_pred ccccCc
Confidence 24553
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-13 Score=110.78 Aligned_cols=172 Identities=17% Similarity=0.069 Sum_probs=116.0
Q ss_pred CCCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCc------cc----hhhccccCcCCcEEEEEccCCCccc
Q 025065 5 EGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSP------KT----EHLRELDGATERLHLFKANLLEEGS 72 (258)
Q Consensus 5 ~~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~----~~~~~~~~~~~~~~~~~~Dl~~~~~ 72 (258)
.+++|+++||||+| .||++++++|+++|++|++.+|..... .. .....+...+..+.++++|+++.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 35689999999995 799999999999999998876432110 00 1111122223467889999999998
Q ss_pred HHHHhC-------CCcEEEecCCCCCCC---CCCch--------------------------------------------
Q 025065 73 FDSAVD-------GCDGVFHTASPVIFL---SDNPQ-------------------------------------------- 98 (258)
Q Consensus 73 ~~~~~~-------~~d~Vih~a~~~~~~---~~~~~-------------------------------------------- 98 (258)
+.++++ .+|+|||+|+..... .....
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 162 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM 162 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC
Confidence 887764 379999999975322 11111
Q ss_pred ---hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 99 ---EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 99 ---~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
..|+.+|...+.+++.++.+ ++++++.++||.+-.+.... .+....... + ....+...+|++++
T Consensus 163 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~-------~~~~~~~~~--~-~~~~~~~~~d~a~~ 232 (256)
T PRK12859 163 VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE-------EIKQGLLPM--F-PFGRIGEPKDAARL 232 (256)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH-------HHHHHHHhc--C-CCCCCcCHHHHHHH
Confidence 56999999999998888765 58999999999986653211 111111111 1 12235578999999
Q ss_pred HHHhhcCC--CCCceE
Q 025065 173 HIRALEVP--KASGRY 186 (258)
Q Consensus 173 ~~~~~~~~--~~~~~~ 186 (258)
+..++... ...|.+
T Consensus 233 ~~~l~s~~~~~~~G~~ 248 (256)
T PRK12859 233 IKFLASEEAEWITGQI 248 (256)
T ss_pred HHHHhCccccCccCcE
Confidence 99988654 235544
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.6e-14 Score=127.42 Aligned_cols=158 Identities=21% Similarity=0.196 Sum_probs=116.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+++||||+|+||++++++|+++|++|++++|+.+.... ....+.....++.++.+|+++.+++.++++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDE-LVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 567899999999999999999999999999999987643211 111111123468899999999998887765
Q ss_pred CCcEEEecCCCCCCC----CCC----ch--------------------------------------------hhHHHHHH
Q 025065 79 GCDGVFHTASPVIFL----SDN----PQ--------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~----~~~----~~--------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||..... ... .. +.|+.+|.
T Consensus 448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 527 (657)
T PRK07201 448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKA 527 (657)
T ss_pred CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHH
Confidence 589999999974211 000 00 67999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+.+++.++.+ .|+++++++||.|.++...+... . .....+..+++|+.++..+.+.
T Consensus 528 a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~---------~-------~~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 528 ALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR---------Y-------NNVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred HHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc---------c-------cCCCCCCHHHHHHHHHHHHHhC
Confidence 999999888765 48999999999998765332100 0 1112568999999999987653
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-13 Score=110.81 Aligned_cols=173 Identities=16% Similarity=0.115 Sum_probs=116.3
Q ss_pred CCCcEEEEECC--cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|+++|||| ++.||++++++|.++|++|++..|..... +.+.++.........+++|++++++++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLE--ERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH 81 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHH--HHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999997 67999999999999999999877653211 2222222111234578999999998887663
Q ss_pred --CCcEEEecCCCCCCC-------C-CCch----------------------------------------------hhHH
Q 025065 79 --GCDGVFHTASPVIFL-------S-DNPQ----------------------------------------------EWYS 102 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~-------~-~~~~----------------------------------------------~~Y~ 102 (258)
++|++||+||..... . .... ..|+
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~ 161 (261)
T PRK08690 82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMG 161 (261)
T ss_pred hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccch
Confidence 589999999985321 0 0111 5699
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+|...+.+++.++.+ +|+++..+.||.+-.+..... .........+. ... ....+..++|+|+++..++..
T Consensus 162 asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~-~~~~~~~~~~~-~~~---p~~r~~~peevA~~v~~l~s~ 236 (261)
T PRK08690 162 MAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGI-ADFGKLLGHVA-AHN---PLRRNVTIEEVGNTAAFLLSD 236 (261)
T ss_pred hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcC-CchHHHHHHHh-hcC---CCCCCCCHHHHHHHHHHHhCc
Confidence 9999999998887654 589999999999976532111 11111111211 111 123467899999999999985
Q ss_pred C--CCCce
Q 025065 180 P--KASGR 185 (258)
Q Consensus 180 ~--~~~~~ 185 (258)
. ...|.
T Consensus 237 ~~~~~tG~ 244 (261)
T PRK08690 237 LSSGITGE 244 (261)
T ss_pred ccCCccee
Confidence 4 23553
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.1e-14 Score=125.72 Aligned_cols=171 Identities=17% Similarity=0.104 Sum_probs=116.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+.++++|||||+|+||++++++|.++|++|++++|+.+.... ....+.....++.++.+|+++++++.++++
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAER-TAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 456899999999999999999999999999999987543221 111122223468899999999998887765
Q ss_pred CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~ 107 (258)
.+|+|||+||...... .... ..|+.+|.+
T Consensus 392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa 471 (582)
T PRK05855 392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAA 471 (582)
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHH
Confidence 4799999999854311 1111 679999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC-Ccc----HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL-NFG----AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-~~~----~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+.+++.++.+ +|++++++.||.|-.+...... ... ......... .. .....+..+|+|++++.++.+
T Consensus 472 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~p~~va~~~~~~~~~ 547 (582)
T PRK05855 472 VLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRAD--KL--YQRRGYGPEKVAKAIVDAVKR 547 (582)
T ss_pred HHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhh--hh--ccccCCCHHHHHHHHHHHHHc
Confidence 99998887755 4899999999999765322110 000 000000000 00 011134689999999999987
Q ss_pred CC
Q 025065 180 PK 181 (258)
Q Consensus 180 ~~ 181 (258)
+.
T Consensus 548 ~~ 549 (582)
T PRK05855 548 NK 549 (582)
T ss_pred CC
Confidence 54
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3e-13 Score=109.38 Aligned_cols=182 Identities=20% Similarity=0.196 Sum_probs=121.0
Q ss_pred CCCCCCCCcEEEEECC--cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhh-ccccCcCCcEEEEEccCCCcccHHHHh
Q 025065 1 MMSGEGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHL-RELDGATERLHLFKANLLEEGSFDSAV 77 (258)
Q Consensus 1 mm~~~~~~~~ilItGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (258)
||. .+++|+++|||| ++.||.+++++|+++|++|++.+|+......+.+ .++ ...+.++++|+++++++.+++
T Consensus 1 ~~~-~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~ 76 (256)
T PRK07889 1 MMG-LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLA 76 (256)
T ss_pred Ccc-cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHH
Confidence 553 367799999999 8999999999999999999998876422111111 111 235678999999998887765
Q ss_pred C-------CCcEEEecCCCCCCC-------CCCch--------------------------------------------h
Q 025065 78 D-------GCDGVFHTASPVIFL-------SDNPQ--------------------------------------------E 99 (258)
Q Consensus 78 ~-------~~d~Vih~a~~~~~~-------~~~~~--------------------------------------------~ 99 (258)
+ ++|++||+||..... ..... .
T Consensus 77 ~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~~~~ 156 (256)
T PRK07889 77 DRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWPAYD 156 (256)
T ss_pred HHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCCccc
Confidence 3 589999999975321 11111 4
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 100 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.|+.+|...+.+++.++.+ +|++++.+.||.+..+..... ...... ....... .|..+.+..++|+|++++.+
T Consensus 157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~-~~~~~~~--~p~~~~~~~p~evA~~v~~l 232 (256)
T PRK07889 157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI-PGFELL-EEGWDER--APLGWDVKDPTPVARAVVAL 232 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc-cCcHHH-HHHHHhc--CccccccCCHHHHHHHHHHH
Confidence 5799999999998888765 589999999999977632211 111111 1111111 11112467899999999999
Q ss_pred hcCCC--CCceE-EEeC
Q 025065 177 LEVPK--ASGRY-LLAG 190 (258)
Q Consensus 177 ~~~~~--~~~~~-~~~~ 190 (258)
+.... ..|.+ ...+
T Consensus 233 ~s~~~~~~tG~~i~vdg 249 (256)
T PRK07889 233 LSDWFPATTGEIVHVDG 249 (256)
T ss_pred hCcccccccceEEEEcC
Confidence 87642 35543 4443
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.3e-14 Score=117.03 Aligned_cols=129 Identities=21% Similarity=0.161 Sum_probs=97.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc--CCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|+++||||+|+||.+++++|+++|++|++++|+.++... ...++... ...+.++.+|+.+.++++++++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~-~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEA-AVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 567999999999999999999999999999999997653321 12222111 2358899999999988887654
Q ss_pred --CCcEEEecCCCCCCCCC--Cch--------------------------------------------------------
Q 025065 79 --GCDGVFHTASPVIFLSD--NPQ-------------------------------------------------------- 98 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~--~~~-------------------------------------------------------- 98 (258)
.+|++||+||....... ...
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~ 170 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYA 170 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCc
Confidence 48999999997532111 111
Q ss_pred --hhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCccccCC
Q 025065 99 --EWYSLAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPF 135 (258)
Q Consensus 99 --~~Y~~sK~~~e~~~~~~~~~-----~~~~~~ilRp~~v~G~~ 135 (258)
..|+.||++.+.+.+.++++ .|+.+..+.||.|..+.
T Consensus 171 ~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 171 GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 25999999999999888753 47999999999997653
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.9e-13 Score=107.91 Aligned_cols=176 Identities=15% Similarity=0.061 Sum_probs=116.4
Q ss_pred CCCCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 4 GEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 4 ~~~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
..|++|+++||||++ .||.+++++|.++|++|++.+|+.. . .+...++........++++|++|++++.++++
T Consensus 4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~-~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~ 81 (260)
T PRK06603 4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-L-EKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIK 81 (260)
T ss_pred cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-H-HHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHH
Confidence 346778999999997 8999999999999999998877631 1 11122221111122457899999988887664
Q ss_pred ----CCcEEEecCCCCCCC-------CCCch---------------------------------------------hhHH
Q 025065 79 ----GCDGVFHTASPVIFL-------SDNPQ---------------------------------------------EWYS 102 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~-------~~~~~---------------------------------------------~~Y~ 102 (258)
++|++||+|+..... ..... ..|+
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~ 161 (260)
T PRK06603 82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMG 161 (260)
T ss_pred HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchh
Confidence 489999999874310 11111 5799
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+|...+.+.+.++.+ +|+++..+.||.+-.+..... ............ . .| ...+..++|+|.++.+++..
T Consensus 162 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~~~~~~~~~~-~--~p-~~r~~~pedva~~~~~L~s~ 236 (260)
T PRK06603 162 VAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI-GDFSTMLKSHAA-T--AP-LKRNTTQEDVGGAAVYLFSE 236 (260)
T ss_pred hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC-CCcHHHHHHHHh-c--CC-cCCCCCHHHHHHHHHHHhCc
Confidence 9999999999888765 579999999999976532110 011111112111 1 11 22367899999999999975
Q ss_pred C--CCCceE
Q 025065 180 P--KASGRY 186 (258)
Q Consensus 180 ~--~~~~~~ 186 (258)
. ...|..
T Consensus 237 ~~~~itG~~ 245 (260)
T PRK06603 237 LSKGVTGEI 245 (260)
T ss_pred ccccCcceE
Confidence 3 235533
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.1e-13 Score=109.30 Aligned_cols=176 Identities=18% Similarity=0.106 Sum_probs=116.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC--------CccchhhccccCcCCcEEEEEccCCCcccHHHHh
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN--------SPKTEHLRELDGATERLHLFKANLLEEGSFDSAV 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (258)
++++++|||||++.||++++++|+++|++|++++|+.+ +.......++.....++.++.+|+++.+++.+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 46789999999999999999999999999999887641 1111111222222345788999999998877665
Q ss_pred C-------CCcEEEecCCCCCCCC---CCch-------------------------------------------------
Q 025065 78 D-------GCDGVFHTASPVIFLS---DNPQ------------------------------------------------- 98 (258)
Q Consensus 78 ~-------~~d~Vih~a~~~~~~~---~~~~------------------------------------------------- 98 (258)
+ ++|++||+||...... ....
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 163 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG 163 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence 3 5799999999743210 0000
Q ss_pred ----hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHH
Q 025065 99 ----EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVY 171 (258)
Q Consensus 99 ----~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~ 171 (258)
..|+.+|.+.+.+++.++.+ +|+++..+.|+ +..+.. ...........+ . ....+..++|++.
T Consensus 164 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~-------~~~~~~~~~~~~-~-~~~~~~~pedva~ 233 (286)
T PRK07791 164 SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT-------ETVFAEMMAKPE-E-GEFDAMAPENVSP 233 (286)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc-------hhhHHHHHhcCc-c-cccCCCCHHHHHH
Confidence 57999999999998888765 58999999998 432211 011111111111 0 1223568999999
Q ss_pred HHHHhhcCC--CCCceE-EEeCC
Q 025065 172 AHIRALEVP--KASGRY-LLAGS 191 (258)
Q Consensus 172 ~~~~~~~~~--~~~~~~-~~~~~ 191 (258)
+++.++... ...|.+ ...+.
T Consensus 234 ~~~~L~s~~~~~itG~~i~vdgG 256 (286)
T PRK07791 234 LVVWLGSAESRDVTGKVFEVEGG 256 (286)
T ss_pred HHHHHhCchhcCCCCcEEEEcCC
Confidence 999998753 345644 44443
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.1e-13 Score=108.56 Aligned_cols=177 Identities=15% Similarity=0.116 Sum_probs=117.0
Q ss_pred CCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC----
Q 025065 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
|++|+++||||+ +.||++++++|.++|++|++.+|+.... +.+.++.. .... ..+++|++|.+++.++++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~--~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALK--KRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHH--HHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence 467999999997 7999999999999999999988864211 11111111 1123 578999999988877653
Q ss_pred ---CCcEEEecCCCCCC-----C--CCCch---------------------------------------------hhHHH
Q 025065 79 ---GCDGVFHTASPVIF-----L--SDNPQ---------------------------------------------EWYSL 103 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~-----~--~~~~~---------------------------------------------~~Y~~ 103 (258)
++|++||+||.... . ..... ..|+.
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~a 159 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGV 159 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhh
Confidence 47999999997421 1 11111 57999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+.+.++.+ +|+++..+.||.|..+..... .. ........... . ....+..++|++.++..++...
T Consensus 160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~~--~-pl~r~~~pedva~~v~fL~s~~ 234 (274)
T PRK08415 160 AKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI-GD-FRMILKWNEIN--A-PLKKNVSIEEVGNSGMYLLSDL 234 (274)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc-ch-hhHHhhhhhhh--C-chhccCCHHHHHHHHHHHhhhh
Confidence 999999999888865 489999999999976532110 00 00011111111 1 1223578899999999998753
Q ss_pred --CCCceE-EEeC
Q 025065 181 --KASGRY-LLAG 190 (258)
Q Consensus 181 --~~~~~~-~~~~ 190 (258)
...|.. .+.+
T Consensus 235 ~~~itG~~i~vdG 247 (274)
T PRK08415 235 SSGVTGEIHYVDA 247 (274)
T ss_pred hhcccccEEEEcC
Confidence 345643 4443
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.2e-13 Score=107.46 Aligned_cols=179 Identities=16% Similarity=0.061 Sum_probs=118.1
Q ss_pred CCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
|++|++|||||+ +.||.+++++|.++|++|++..|+.... +.++++.........+++|++++++++++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~--~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALK--KRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHH--HHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 567899999997 8999999999999999998887752211 1122221111234578999999998887654
Q ss_pred --CCcEEEecCCCCCCC-------CCCch---------------------------------------------hhHHHH
Q 025065 79 --GCDGVFHTASPVIFL-------SDNPQ---------------------------------------------EWYSLA 104 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~-------~~~~~---------------------------------------------~~Y~~s 104 (258)
.+|++||+||..... ..... ..|+.+
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~as 165 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVA 165 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhH
Confidence 479999999975321 11111 569999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
|...+.+++.++.+ +|+++..+.||.+..+..... ... .......... .| ...+..++|+|+++++++...
T Consensus 166 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~~--~p-~~r~~~peevA~~~~~L~s~~~ 240 (272)
T PRK08159 166 KAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GDF-RYILKWNEYN--AP-LRRTVTIEEVGDSALYLLSDLS 240 (272)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-Ccc-hHHHHHHHhC--Cc-ccccCCHHHHHHHHHHHhCccc
Confidence 99999999888766 479999999999976422111 110 0111111111 11 123578999999999999754
Q ss_pred -CCCceE-EEeCC
Q 025065 181 -KASGRY-LLAGS 191 (258)
Q Consensus 181 -~~~~~~-~~~~~ 191 (258)
...|.. ...+.
T Consensus 241 ~~itG~~i~vdgG 253 (272)
T PRK08159 241 RGVTGEVHHVDSG 253 (272)
T ss_pred cCccceEEEECCC
Confidence 345644 44443
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.7e-13 Score=109.78 Aligned_cols=128 Identities=23% Similarity=0.193 Sum_probs=95.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHh------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAV------ 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------ 77 (258)
+.+|.|+||||+..||.+++.+|.++|.+++.+.|...+... +.+.+... ..++..+++|++|.+++.+.+
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~-~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGS-LEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCC-cCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 568999999999999999999999999998888887766533 11111111 125999999999999888654
Q ss_pred -CCCcEEEecCCCCCCCCCCch--------------------------------------------------hhHHHHHH
Q 025065 78 -DGCDGVFHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 78 -~~~d~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~ 106 (258)
.++|++||+||+......... +.|..||.
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~ 168 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKH 168 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHH
Confidence 469999999999653222221 57999999
Q ss_pred HHHHHHHHHHHHcCCcE--E--EEcCCccccC
Q 025065 107 LAEEAAWKFAKENGIDL--V--AIHPGTVIGP 134 (258)
Q Consensus 107 ~~e~~~~~~~~~~~~~~--~--ilRp~~v~G~ 134 (258)
+.+.+.+.+..+..-.. + ++-||.|=..
T Consensus 169 Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te 200 (282)
T KOG1205|consen 169 ALEGFFETLRQELIPLGTIIIILVSPGPIETE 200 (282)
T ss_pred HHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence 99999999888753222 2 4778877543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=107.13 Aligned_cols=165 Identities=18% Similarity=0.133 Sum_probs=111.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------CCc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------GCD 81 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d 81 (258)
+|.++|||+ |+||++++++|. +|++|++++|+..... ....++.....++.++++|+++++++.++++ ++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLE-AAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 467999998 799999999996 8999999998754321 1112222223467889999999988887764 489
Q ss_pred EEEecCCCCCCCCCCch---------------------------------------------------------------
Q 025065 82 GVFHTASPVIFLSDNPQ--------------------------------------------------------------- 98 (258)
Q Consensus 82 ~Vih~a~~~~~~~~~~~--------------------------------------------------------------- 98 (258)
+|||+||..... ....
T Consensus 79 ~li~nAG~~~~~-~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (275)
T PRK06940 79 GLVHTAGVSPSQ-ASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFL 157 (275)
T ss_pred EEEECCCcCCch-hhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccc
Confidence 999999974221 0110
Q ss_pred ---------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC-ccHHHHHHHHcCCCCCCCCcceee
Q 025065 99 ---------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN-FGAEVILNLINGDQSFAFPYIFVE 165 (258)
Q Consensus 99 ---------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~i~ 165 (258)
..|+.||...+.+++.++.+ +|+++..+.||.+..+....... ........+.... ....+..
T Consensus 158 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~ 233 (275)
T PRK06940 158 QPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS----PAGRPGT 233 (275)
T ss_pred cccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhC----CcccCCC
Confidence 24999999999998887765 47999999999998764221100 0011111221111 1223678
Q ss_pred HHHHHHHHHHhhcCC
Q 025065 166 IRDVVYAHIRALEVP 180 (258)
Q Consensus 166 v~D~a~~~~~~~~~~ 180 (258)
.+|+|+++..++...
T Consensus 234 peeia~~~~fL~s~~ 248 (275)
T PRK06940 234 PDEIAALAEFLMGPR 248 (275)
T ss_pred HHHHHHHHHHHcCcc
Confidence 999999999988643
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.9e-13 Score=109.48 Aligned_cols=172 Identities=21% Similarity=0.124 Sum_probs=112.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc--------cc-hhhccccCcCCcEEEEEccCCCcccHHHH
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP--------KT-EHLRELDGATERLHLFKANLLEEGSFDSA 76 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (258)
+++|+++||||++.||.+++++|+++|++|++++|+..+. .. ...+.+...+..+.++++|++++++++++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 6789999999999999999999999999999999875321 11 11112222233577899999999888876
Q ss_pred hC-------CCcEEEecC-CCCC-----CC--CCCch-------------------------------------------
Q 025065 77 VD-------GCDGVFHTA-SPVI-----FL--SDNPQ------------------------------------------- 98 (258)
Q Consensus 77 ~~-------~~d~Vih~a-~~~~-----~~--~~~~~------------------------------------------- 98 (258)
++ ++|++||+| +... .. .....
T Consensus 86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~ 165 (305)
T PRK08303 86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN 165 (305)
T ss_pred HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence 53 489999999 6421 10 01000
Q ss_pred -------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHH
Q 025065 99 -------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRD 168 (258)
Q Consensus 99 -------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D 168 (258)
..|+.+|.....+.+.++.+ .|+++..+.||.+-.+............+..... . .|...-+...+|
T Consensus 166 ~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~--~p~~~~~~~pee 242 (305)
T PRK08303 166 ATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALA-K--EPHFAISETPRY 242 (305)
T ss_pred CcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhc-c--ccccccCCCHHH
Confidence 24999999999998887765 4799999999988655211000000000001011 1 011122447899
Q ss_pred HHHHHHHhhcCC
Q 025065 169 VVYAHIRALEVP 180 (258)
Q Consensus 169 ~a~~~~~~~~~~ 180 (258)
++.+++.++..+
T Consensus 243 vA~~v~fL~s~~ 254 (305)
T PRK08303 243 VGRAVAALAADP 254 (305)
T ss_pred HHHHHHHHHcCc
Confidence 999999999765
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-12 Score=103.04 Aligned_cols=160 Identities=14% Similarity=0.135 Sum_probs=115.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
.+++.||||||++.+|+.++.+++++|..+.+.+.+.....+ ........ ..+..+.+|+++++++.+..+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~e-tv~~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEE-TVKEIRKI-GEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHH-HHHHHHhc-CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 357899999999999999999999999988888887665533 22222211 268999999999988776543
Q ss_pred CCcEEEecCCCCCCCC----CCch----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS----DNPQ----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~----~~~~----------------------------------------------~~Y~~sK~~~ 108 (258)
.+|++||+||++.... .+.. ..|..||.++
T Consensus 114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~ 193 (300)
T KOG1201|consen 114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAA 193 (300)
T ss_pred CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHH
Confidence 5899999999975421 1111 7899999998
Q ss_pred HHHHHHHHHH------cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCC
Q 025065 109 EEAAWKFAKE------NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 109 e~~~~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
.-+.+.+..+ .|++++.+-|+.+-... + .+...++.....+..+.+|+.++.++...+.
T Consensus 194 vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm-----------f----~~~~~~~~l~P~L~p~~va~~Iv~ai~~n~~ 258 (300)
T KOG1201|consen 194 VGFHESLSMELRALGKDGIKTTLVCPYFINTGM-----------F----DGATPFPTLAPLLEPEYVAKRIVEAILTNQA 258 (300)
T ss_pred HHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc-----------c----CCCCCCccccCCCCHHHHHHHHHHHHHcCCc
Confidence 7776666543 36889999888774211 1 1121222455688999999999998887653
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-12 Score=104.25 Aligned_cols=161 Identities=18% Similarity=0.195 Sum_probs=111.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcC-CcEEEEEccCCCcccHHHHhC-------CC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
|+++||||++.||.+++++|. +|++|++++|+.++... ...++...+ ..+.++++|++|+++++++++ ++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQG-LASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHH-HHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 469999999999999999998 59999999987644321 112221112 247889999999988877653 48
Q ss_pred cEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 81 d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~~e 109 (258)
|++||+||...... .... ..|+.+|...+
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~ 158 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD 158 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence 99999999753211 1110 57999999998
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCceE
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRY 186 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~ 186 (258)
.+++.++.+ .|++++.+.||.+..+...... + .. -...++|+|++++.++......+.+
T Consensus 159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~--------------~---~~-~~~~pe~~a~~~~~~~~~~~~~~~~ 220 (246)
T PRK05599 159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK--------------P---AP-MSVYPRDVAAAVVSAITSSKRSTTL 220 (246)
T ss_pred HHHHHHHHHhcCCCceEEEecCCcccchhhcCCC--------------C---CC-CCCCHHHHHHHHHHHHhcCCCCceE
Confidence 888887765 4789999999988765311100 0 00 0246899999999999986543344
Q ss_pred EEe
Q 025065 187 LLA 189 (258)
Q Consensus 187 ~~~ 189 (258)
...
T Consensus 221 ~~~ 223 (246)
T PRK05599 221 WIP 223 (246)
T ss_pred EeC
Confidence 333
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=7e-13 Score=104.91 Aligned_cols=145 Identities=19% Similarity=0.159 Sum_probs=104.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh---C--CCcE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV---D--GCDG 82 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~--~~d~ 82 (258)
|++++||||+|+||++++++|+++|++|++++|+..... .+.. .+++++.+|+++.+.+.+++ . .+|+
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~--~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~ 73 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALA--ALQA-----LGAEALALDVADPASVAGLAWKLDGEALDA 73 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH--HHHh-----ccceEEEecCCCHHHHHHHHHHhcCCCCCE
Confidence 368999999999999999999999999999998754321 1211 24578999999999888764 2 4899
Q ss_pred EEecCCCCCCC--C--C-Cch----------------------------------------------h---hHHHHHHHH
Q 025065 83 VFHTASPVIFL--S--D-NPQ----------------------------------------------E---WYSLAKTLA 108 (258)
Q Consensus 83 Vih~a~~~~~~--~--~-~~~----------------------------------------------~---~Y~~sK~~~ 108 (258)
|||+++..... . . ... . .|+.+|...
T Consensus 74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~ 153 (222)
T PRK06953 74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAAL 153 (222)
T ss_pred EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHH
Confidence 99999975211 1 0 000 1 389999988
Q ss_pred HHHHHHHHHHc-CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 109 EEAAWKFAKEN-GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 109 e~~~~~~~~~~-~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.+++.++.+. +++++.++||.+..+.... ...+..++.++.+..++....
T Consensus 154 ~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~ 205 (222)
T PRK06953 154 NDALRAASLQARHATCIALHPGWVRTDMGGA----------------------QAALDPAQSVAGMRRVIAQAT 205 (222)
T ss_pred HHHHHHHhhhccCcEEEEECCCeeecCCCCC----------------------CCCCCHHHHHHHHHHHHHhcC
Confidence 88888776654 7888889998887653110 013466788888888766543
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-12 Score=104.31 Aligned_cols=168 Identities=17% Similarity=0.104 Sum_probs=112.2
Q ss_pred CCCcEEEEECC--cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|+++|||| ++.||.+++++|+++|++|++.+|..... +.+.++.........+++|++|++++.++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK--DRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH 81 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH--HHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence 56789999996 67999999999999999999876642211 1121111111123468899999998887664
Q ss_pred --CCcEEEecCCCCCCC--------CCCch---------------------------------------------hhHHH
Q 025065 79 --GCDGVFHTASPVIFL--------SDNPQ---------------------------------------------EWYSL 103 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~--------~~~~~---------------------------------------------~~Y~~ 103 (258)
++|++||+||..... ..... ..|+.
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~a 161 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGL 161 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHH
Confidence 489999999975321 01111 57999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+.+.++.+ +|++++.+.||.+-.+..... .........+ ... .| ...+..++|+++++..++..+
T Consensus 162 sKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~~~~~~~~~-~~~--~p-~~r~~~pedva~~~~~l~s~~ 236 (260)
T PRK06997 162 AKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGI-KDFGKILDFV-ESN--AP-LRRNVTIEEVGNVAAFLLSDL 236 (260)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccc-cchhhHHHHH-Hhc--Cc-ccccCCHHHHHHHHHHHhCcc
Confidence 999999999988875 489999999999876422110 0001111111 111 11 223678999999999998753
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.7e-13 Score=105.97 Aligned_cols=146 Identities=12% Similarity=0.056 Sum_probs=106.1
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----CCcEEEe
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----GCDGVFH 85 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~Vih 85 (258)
|++||||+|.||++++++|.++|++|++++|+.++... .... .++.++++|+++++++.++++ .+|++||
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~-~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEV-AAKE-----LDVDAIVCDNTDPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHh-----ccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 69999999999999999999999999999987533211 1111 135788999999998887765 5899999
Q ss_pred cCCCCC---C----CCC-Cch-----------------------------------------hhHHHHHHHHHHHHHHHH
Q 025065 86 TASPVI---F----LSD-NPQ-----------------------------------------EWYSLAKTLAEEAAWKFA 116 (258)
Q Consensus 86 ~a~~~~---~----~~~-~~~-----------------------------------------~~Y~~sK~~~e~~~~~~~ 116 (258)
+|+... . ... ... ..|+.+|...+.+++.++
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~Y~asKaal~~~~~~la 155 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENPPAGSAEAAIKAALSNWTAGQA 155 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCCccccHHHHHHHHHHHHHHH
Confidence 998421 0 011 111 579999999999998887
Q ss_pred HH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 117 KE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 117 ~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+ +|+++..+.||.+..+.. .. .. . .| ...++|+++++..++..+
T Consensus 156 ~e~~~~gI~v~~v~PG~v~t~~~-----------~~-~~-~--~p----~~~~~~ia~~~~~l~s~~ 203 (223)
T PRK05884 156 AVFGTRGITINAVACGRSVQPGY-----------DG-LS-R--TP----PPVAAEIARLALFLTTPA 203 (223)
T ss_pred HHhhhcCeEEEEEecCccCchhh-----------hh-cc-C--CC----CCCHHHHHHHHHHHcCch
Confidence 65 479999999999864421 01 00 1 01 127899999999988753
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-12 Score=115.12 Aligned_cols=166 Identities=17% Similarity=0.173 Sum_probs=113.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|+++||||++.||.+++++|.++|++|++++|+.+.... ...++ ..++.++++|+++++++.++++ +
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARE-RADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGR 79 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 57899999999999999999999999999999987543221 11111 2457789999999988877654 4
Q ss_pred CcEEEecCCCCCC-----CCCCch------------------------------------------------hhHHHHHH
Q 025065 80 CDGVFHTASPVIF-----LSDNPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 80 ~d~Vih~a~~~~~-----~~~~~~------------------------------------------------~~Y~~sK~ 106 (258)
+|++||+||.... ...... ..|+.+|.
T Consensus 80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKa 159 (520)
T PRK06484 80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKA 159 (520)
T ss_pred CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHH
Confidence 8999999997321 111110 67999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
..+.+++.++.+ .+++++.+.||.+..+......... .......... ++ ...+...+|+++++..++...
T Consensus 160 al~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~-~~~~~~~~~~--~~-~~~~~~~~~va~~v~~l~~~~ 232 (520)
T PRK06484 160 AVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAG-KLDPSAVRSR--IP-LGRLGRPEEIAEAVFFLASDQ 232 (520)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccc-hhhhHHHHhc--CC-CCCCcCHHHHHHHHHHHhCcc
Confidence 999999888765 4899999999998766422110000 0000101111 11 123568899999999988753
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.5e-13 Score=101.31 Aligned_cols=125 Identities=19% Similarity=0.193 Sum_probs=89.3
Q ss_pred CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHHhhcCCCCCceEEEe-CCCcC
Q 025065 120 GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQ 194 (258)
Q Consensus 120 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~t 194 (258)
.++.+++|.|.|.|.+.... ..++..+.-|. .+++ +.+.|||++|++..+-.+++++...|+.++. +++++
T Consensus 171 ~~r~~~iR~GvVlG~gGGa~----~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~~~ 246 (315)
T KOG3019|consen 171 DVRVALIRIGVVLGKGGGAL----AMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVINGVAPNPVR 246 (315)
T ss_pred ceeEEEEEEeEEEecCCcch----hhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCceecccCCCccc
Confidence 58999999999999874432 22233333333 3333 8999999999999999999999888977654 89999
Q ss_pred HHHHHHHHHHhCCCC---CCCCCCc----c-----CCCCccccCHHHHHhcCCCc--cchhHHHHHHH
Q 025065 195 HSDILKFLREHYPTL---LRSGKLE----E-----KYQPTIKVSQERAKSLGINF--TPWEVGVRGCI 248 (258)
Q Consensus 195 ~~e~~~~i~~~~~~~---~~~~~~~----~-----~~~~~~~~d~~k~~~lg~~p--~~~~~~l~~~~ 248 (258)
..|+++.+.++++.. ++|.... . .......+-..++.++||+. +.+.++++++.
T Consensus 247 n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 247 NGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFKYPYVKDALRAIM 314 (315)
T ss_pred hHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceeechHHHHHHHHHh
Confidence 999999999998643 3333322 1 11223335566777789988 56788888764
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.7e-12 Score=101.89 Aligned_cols=128 Identities=13% Similarity=0.119 Sum_probs=93.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-------C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------D 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~ 78 (258)
+++++++||||++.||++++++|.++|++|++++|+.+.... ..+++.....++..+.+|+.+++++.+++ .
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~-~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKD-TYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 457899999999999999999999999999999987644321 11222222345778899999998887654 3
Q ss_pred -CCcEEEecCCCCCC----CCCCch---------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIF----LSDNPQ---------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~----~~~~~~---------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||.... ...... ..|+.+|...
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~Y~asKaal 161 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQDLTGVESSNALV 161 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCcchhHHHHHHH
Confidence 58999999975321 111111 4688888888
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGP 134 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~ 134 (258)
+.+.+.++.+ +++++..+.||.+-.+
T Consensus 162 ~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 162 SGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 8887777654 4788888888887665
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.3e-12 Score=109.43 Aligned_cols=174 Identities=15% Similarity=0.042 Sum_probs=112.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++++++||||+|.||..++++|.++|++|+++++.........+.. . .+..++.+|+++.+++.++++ +
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~--~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVAN--R--VGGTALALDITAPDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH--H--cCCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence 5689999999999999999999999999999987533221111110 0 134678899999988777654 5
Q ss_pred CcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+|+...... .... ..|+.+|...+
T Consensus 285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~ 364 (450)
T PRK08261 285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVI 364 (450)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHH
Confidence 899999999753211 0000 67999999888
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 184 (258)
.+++.++.+ .|+.+..+.||.+-.+.... .+ ........... .....--.+|+++++.+++.... ..|
T Consensus 365 ~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~-~~---~~~~~~~~~~~---~l~~~~~p~dva~~~~~l~s~~~~~itG 437 (450)
T PRK08261 365 GLVQALAPLLAERGITINAVAPGFIETQMTAA-IP---FATREAGRRMN---SLQQGGLPVDVAETIAWLASPASGGVTG 437 (450)
T ss_pred HHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc-cc---hhHHHHHhhcC---CcCCCCCHHHHHHHHHHHhChhhcCCCC
Confidence 888777654 58999999999875432111 01 01111111001 11223457899999999886432 345
Q ss_pred -eEEEeCC
Q 025065 185 -RYLLAGS 191 (258)
Q Consensus 185 -~~~~~~~ 191 (258)
.+.+++.
T Consensus 438 ~~i~v~g~ 445 (450)
T PRK08261 438 NVVRVCGQ 445 (450)
T ss_pred CEEEECCC
Confidence 3344443
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.1e-12 Score=103.70 Aligned_cols=175 Identities=17% Similarity=0.190 Sum_probs=113.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
+++++||||++.||.+++++|+++| ++|++++|+...... ....+......+.++.+|+++.+++.++++ +
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQ-AAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999 999999987643221 112222123467888999999988776553 4
Q ss_pred CcEEEecCCCCCCC----CCCch---------------------------------------------------------
Q 025065 80 CDGVFHTASPVIFL----SDNPQ--------------------------------------------------------- 98 (258)
Q Consensus 80 ~d~Vih~a~~~~~~----~~~~~--------------------------------------------------------- 98 (258)
+|++||+||..... .....
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 161 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL 161 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence 89999999974211 00111
Q ss_pred -------------------------hhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCcccc-CCcCCCCCccHHHHH
Q 025065 99 -------------------------EWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIG-PFFQPILNFGAEVIL 148 (258)
Q Consensus 99 -------------------------~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilRp~~v~G-~~~~~~~~~~~~~~~ 148 (258)
..|+.||++...+.+.++++ .|+.++.++||.|.. +....... ....+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~-~~~~~~ 240 (314)
T TIGR01289 162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVP-LFRTLF 240 (314)
T ss_pred cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccH-HHHHHH
Confidence 12999999988877777654 379999999999853 22111111 100000
Q ss_pred HHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEE
Q 025065 149 NLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASGRYLL 188 (258)
Q Consensus 149 ~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~ 188 (258)
...... ....+..+++.++.++.++..+. ..|.|+.
T Consensus 241 ~~~~~~----~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~ 278 (314)
T TIGR01289 241 PPFQKY----ITKGYVSEEEAGERLAQVVSDPKLKKSGVYWS 278 (314)
T ss_pred HHHHHH----HhccccchhhhhhhhHHhhcCcccCCCceeee
Confidence 100000 11125678999999998887643 3456643
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.6e-12 Score=103.05 Aligned_cols=165 Identities=15% Similarity=0.099 Sum_probs=110.0
Q ss_pred EEEEECCcchHHHHHHHHHHH----CCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhCC----
Q 025065 10 VVCVTGASGFVASWLVKLLLQ----RGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVDG---- 79 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~---- 79 (258)
.++||||+|.||.+++++|.+ .|++|++++|+.+.... ...++.. ....+.++.+|+++++++.++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~-~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQ-LKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHH-HHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 589999999999999999997 79999999987643321 1111211 123578899999999888776542
Q ss_pred -------CcEEEecCCCCCC---CCC---Cch------------------------------------------------
Q 025065 80 -------CDGVFHTASPVIF---LSD---NPQ------------------------------------------------ 98 (258)
Q Consensus 80 -------~d~Vih~a~~~~~---~~~---~~~------------------------------------------------ 98 (258)
.|+|||+||.... ... +..
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~ 160 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG 160 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence 2589999997421 111 111
Q ss_pred -hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 99 -EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 99 -~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
..|+.+|...+.+++.++.+ +|+.++.+.||.+-.+......+ ........+.... ....+..++|+|.+
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~eva~~ 236 (256)
T TIGR01500 161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELK----AKGKLVDPKVSAQK 236 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHH----hcCCCCCHHHHHHH
Confidence 56999999999999988766 47999999999996653110000 0000111110000 12236789999999
Q ss_pred HHHhhcC
Q 025065 173 HIRALEV 179 (258)
Q Consensus 173 ~~~~~~~ 179 (258)
++.++.+
T Consensus 237 ~~~l~~~ 243 (256)
T TIGR01500 237 LLSLLEK 243 (256)
T ss_pred HHHHHhc
Confidence 9999864
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.2e-12 Score=95.84 Aligned_cols=123 Identities=19% Similarity=0.227 Sum_probs=85.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchh--hccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEH--LRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++++||||+|+||.+++++|.++|. .|+++.|+..+..... +..+.....++.++.+|+++++.+.+++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999986 6888888654432110 12222223567889999999888777654
Q ss_pred CCcEEEecCCCCCCCCCC---ch-------------------------------------------hhHHHHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDN---PQ-------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~---~~-------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
.+|+|||+++........ .. ..|+.+|...+.++
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~ 160 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALA 160 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHH
Confidence 369999999964321100 00 45788888888877
Q ss_pred HHHHHHcCCcEEEEcCCccc
Q 025065 113 WKFAKENGIDLVAIHPGTVI 132 (258)
Q Consensus 113 ~~~~~~~~~~~~ilRp~~v~ 132 (258)
+. ....+++++.+.|+.+-
T Consensus 161 ~~-~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 161 AH-RRARGLPATSINWGAWA 179 (180)
T ss_pred HH-HHhcCCceEEEeecccc
Confidence 54 34557888888777653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.3e-12 Score=105.79 Aligned_cols=154 Identities=12% Similarity=0.155 Sum_probs=105.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc--CCcEEEEEccCCC--cccHH---HHhCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLE--EGSFD---SAVDG 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~--~~~~~---~~~~~ 79 (258)
.++.++||||+|+||++++++|.++|++|++++|+++.... ...++... ...+..+.+|+++ .+.+. +.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~-~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKD-VSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 36899999999999999999999999999999997654321 11111111 1357788899985 22222 33343
Q ss_pred --CcEEEecCCCCCCC-----CCCch-------------------------------------------------hhHHH
Q 025065 80 --CDGVFHTASPVIFL-----SDNPQ-------------------------------------------------EWYSL 103 (258)
Q Consensus 80 --~d~Vih~a~~~~~~-----~~~~~-------------------------------------------------~~Y~~ 103 (258)
+|++||+||..... ..... +.|+.
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~a 210 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAA 210 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHH
Confidence 56999999975321 11111 56999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
||...+.+.+.++.+ .|++++.+.||.|-.+.... ... ..-.+..+++|+.++..+..
T Consensus 211 SKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~------------~~~------~~~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 211 TKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI------------RRS------SFLVPSSDGYARAALRWVGY 271 (320)
T ss_pred HHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc------------cCC------CCCCCCHHHHHHHHHHHhCC
Confidence 999999999888766 48999999999996653210 001 01134789999999998864
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.7e-11 Score=96.70 Aligned_cols=176 Identities=19% Similarity=0.129 Sum_probs=121.5
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHh----
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAV---- 77 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---- 77 (258)
..+.+|.++|||++..||++++++|.+.|.+|++.+|+.+.... ..+........++..+.+|+++.++.++++
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999998765322 111111111356889999999887666543
Q ss_pred ----CCCcEEEecCCCCCCCC----CCch-------------------------------------------------hh
Q 025065 78 ----DGCDGVFHTASPVIFLS----DNPQ-------------------------------------------------EW 100 (258)
Q Consensus 78 ----~~~d~Vih~a~~~~~~~----~~~~-------------------------------------------------~~ 100 (258)
.++|+++|+||...... ..+. ..
T Consensus 84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~ 163 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVA 163 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCccc
Confidence 35899999999864321 1111 26
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC-ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 101 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
|+.+|...+++.+..+.+ +|+++..+-||.|..+....... .....+.....-+... ..-.+.-++|++.++..+
T Consensus 164 Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-p~gr~g~~~eva~~~~fl 242 (270)
T KOG0725|consen 164 YGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAV-PLGRVGTPEEVAEAAAFL 242 (270)
T ss_pred chhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccc-ccCCccCHHHHHHhHHhh
Confidence 999999999999998865 58999999999998886211111 0001111110011111 233577899999999988
Q ss_pred hcCC
Q 025065 177 LEVP 180 (258)
Q Consensus 177 ~~~~ 180 (258)
+...
T Consensus 243 a~~~ 246 (270)
T KOG0725|consen 243 ASDD 246 (270)
T ss_pred cCcc
Confidence 8764
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.1e-11 Score=92.99 Aligned_cols=177 Identities=16% Similarity=0.149 Sum_probs=119.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
..+|++++||+.|.||..++++|+.+|..+.+++.+.+.... ..+++. .....+.|+++|+++..++++.++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai-~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAI-NPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhcc-CCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 358999999999999999999999999888877766655433 223322 235678999999999999888776
Q ss_pred -CCcEEEecCCCCCCCCCCch---------------------------------------------hhHHHHHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNPQ---------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~~---------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
.+|++||.||+......+.. ..|+.||.-.-.+.
T Consensus 82 g~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFT 161 (261)
T KOG4169|consen 82 GTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFT 161 (261)
T ss_pred CceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeee
Confidence 37999999999653221111 67999998554443
Q ss_pred HH-----HHHHcCCcEEEEcCCccccCCc----C-CCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCC
Q 025065 113 WK-----FAKENGIDLVAIHPGTVIGPFF----Q-PILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 113 ~~-----~~~~~~~~~~ilRp~~v~G~~~----~-~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
++ +..+.|+++..+.||.+-..-. . ........-+...+ ....-....+++..++.+++.+..
T Consensus 162 RSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l-------~~~~~q~~~~~a~~~v~aiE~~~N 234 (261)
T KOG4169|consen 162 RSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEAL-------ERAPKQSPACCAINIVNAIEYPKN 234 (261)
T ss_pred hhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHH-------HHcccCCHHHHHHHHHHHHhhccC
Confidence 33 3456799999999997643210 0 00000011112212 122355778899999999999654
Q ss_pred CceEEEeC
Q 025065 183 SGRYLLAG 190 (258)
Q Consensus 183 ~~~~~~~~ 190 (258)
+-+|+++.
T Consensus 235 Gaiw~v~~ 242 (261)
T KOG4169|consen 235 GAIWKVDS 242 (261)
T ss_pred CcEEEEec
Confidence 44886664
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.9e-12 Score=94.30 Aligned_cols=84 Identities=25% Similarity=0.317 Sum_probs=63.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
|+++||||+|-||.+++++|+++| +.|+++.|+...... ....++.....++.++++|++++++++++++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999995 577888887111111 2222233334789999999999988887764 4
Q ss_pred CcEEEecCCCCCC
Q 025065 80 CDGVFHTASPVIF 92 (258)
Q Consensus 80 ~d~Vih~a~~~~~ 92 (258)
+|++||++|....
T Consensus 81 ld~li~~ag~~~~ 93 (167)
T PF00106_consen 81 LDILINNAGIFSD 93 (167)
T ss_dssp ESEEEEECSCTTS
T ss_pred ccccccccccccc
Confidence 7999999999653
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.6e-10 Score=95.15 Aligned_cols=168 Identities=18% Similarity=0.170 Sum_probs=118.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+.++.++|||||..||.+.+++|..+|.+|+...|+...... +.+.. ...+..+.++++|+.+..++.+..+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~~~~ 111 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEFKKK 111 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence 467899999999999999999999999999999998744332 22222 1235678889999999988887654
Q ss_pred --CCcEEEecCCCCCCCCC-Cc---h------------------------------------------------------
Q 025065 79 --GCDGVFHTASPVIFLSD-NP---Q------------------------------------------------------ 98 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~-~~---~------------------------------------------------------ 98 (258)
..|+.||+||+...... .. .
T Consensus 112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~ 191 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLY 191 (314)
T ss_pred CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCc
Confidence 36999999998643221 11 1
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 99 ---EWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 99 ---~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
..|+.||++......+++++. |+.+..+.||.+.++.... .......+.+.+... =+-..+.-|...
T Consensus 192 ~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~-------~~ks~~~ga~t~ 263 (314)
T KOG1208|consen 192 SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWP-------LTKSPEQGAATT 263 (314)
T ss_pred cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec-chHHHHHHHHHHHHH-------hccCHHHHhhhe
Confidence 129999999888888887765 6999999999998885443 122222122221110 012567788888
Q ss_pred HHhhcCCCC
Q 025065 174 IRALEVPKA 182 (258)
Q Consensus 174 ~~~~~~~~~ 182 (258)
+.++.+|+.
T Consensus 264 ~~~a~~p~~ 272 (314)
T KOG1208|consen 264 CYAALSPEL 272 (314)
T ss_pred ehhccCccc
Confidence 888888753
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.2e-11 Score=90.43 Aligned_cols=167 Identities=18% Similarity=0.081 Sum_probs=118.9
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc-CCcEEEEEccCCCcccHHHHhCC-
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVDG- 79 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~- 79 (258)
|.....++.|++||+.-.||+++++.|.+.|.+|+++.|++... .++... +.-+..+++|+.+-+.+.+.+..
T Consensus 1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L-----~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v 75 (245)
T KOG1207|consen 1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANL-----LSLVKETPSLIIPIVGDLSAWEALFKLLVPV 75 (245)
T ss_pred CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHH-----HHHHhhCCcceeeeEecccHHHHHHHhhccc
Confidence 44455789999999999999999999999999999999987443 222222 33488999999997777777653
Q ss_pred --CcEEEecCCCCCCCCCCch---------------------------------------------------hhHHHHHH
Q 025065 80 --CDGVFHTASPVIFLSDNPQ---------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 80 --~d~Vih~a~~~~~~~~~~~---------------------------------------------------~~Y~~sK~ 106 (258)
+|-++|+||..-....... +.|..+|.
T Consensus 76 ~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKa 155 (245)
T KOG1207|consen 76 FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKA 155 (245)
T ss_pred CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHH
Confidence 6999999998522111100 78999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccC-CcCCCC-C-ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGP-FFQPIL-N-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~-~~~~~~-~-~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+.+.+.++.+. .+++..+-|..|... +.+.+. + ....++.++ +.-.|.-++.++.++..++...
T Consensus 156 ALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~ri--------Pl~rFaEV~eVVnA~lfLLSd~ 227 (245)
T KOG1207|consen 156 ALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRI--------PLKRFAEVDEVVNAVLFLLSDN 227 (245)
T ss_pred HHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhC--------chhhhhHHHHHHhhheeeeecC
Confidence 9999988888775 588889999988753 222221 1 011111111 3445889999999999988765
Q ss_pred C
Q 025065 181 K 181 (258)
Q Consensus 181 ~ 181 (258)
.
T Consensus 228 s 228 (245)
T KOG1207|consen 228 S 228 (245)
T ss_pred c
Confidence 3
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.26 E-value=9e-10 Score=90.82 Aligned_cols=170 Identities=15% Similarity=0.045 Sum_probs=106.5
Q ss_pred CCCCcEEEEECC--cchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhc-----c---ccC--cCCcEEEEEccC--C
Q 025065 5 EGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLR-----E---LDG--ATERLHLFKANL--L 68 (258)
Q Consensus 5 ~~~~~~ilItGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~-----~---~~~--~~~~~~~~~~Dl--~ 68 (258)
.+++|++||||| +..||.+++++|.++|.+|++ .|..+.... .... + ... .......+.+|+ .
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD 84 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence 367899999999 899999999999999999988 554332111 0000 0 000 001245678888 4
Q ss_pred Ccc------------------cHHHHhC-------CCcEEEecCCCCCC-----CCCCch--------------------
Q 025065 69 EEG------------------SFDSAVD-------GCDGVFHTASPVIF-----LSDNPQ-------------------- 98 (258)
Q Consensus 69 ~~~------------------~~~~~~~-------~~d~Vih~a~~~~~-----~~~~~~-------------------- 98 (258)
+++ ++.++++ ++|++|||||.... ......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~ 164 (303)
T PLN02730 85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF 164 (303)
T ss_pred ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 333 4454443 48999999975321 111111
Q ss_pred --------------------------hhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCccccCCcCCCCCccHHHHH
Q 025065 99 --------------------------EWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVIL 148 (258)
Q Consensus 99 --------------------------~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~ 148 (258)
..|+.+|...+.+.+.++.+ +|+++..+-||.+-.+.... .........
T Consensus 165 ~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~-~~~~~~~~~ 243 (303)
T PLN02730 165 GPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA-IGFIDDMIE 243 (303)
T ss_pred HHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc-ccccHHHHH
Confidence 26999999999999988875 37999999999997764321 111111111
Q ss_pred HHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 149 NLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 149 ~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.. ... .| ...+...+|++.++++++...
T Consensus 244 ~~-~~~--~p-l~r~~~peevA~~~~fLaS~~ 271 (303)
T PLN02730 244 YS-YAN--AP-LQKELTADEVGNAAAFLASPL 271 (303)
T ss_pred HH-Hhc--CC-CCCCcCHHHHHHHHHHHhCcc
Confidence 11 111 11 123568999999999998743
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.25 E-value=6e-11 Score=89.14 Aligned_cols=123 Identities=16% Similarity=0.191 Sum_probs=94.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
.+.+||||||+..||..|++++.+.|-+|++..|+... +.+.....+.+....+|+.|.+..++++. .
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~-----L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~ 78 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEER-----LAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPN 78 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHH-----HHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCc
Confidence 47899999999999999999999999999999998643 33333345778889999999987776553 4
Q ss_pred CcEEEecCCCCCC-CCCCch---------------------------------------------------hhHHHHHHH
Q 025065 80 CDGVFHTASPVIF-LSDNPQ---------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 80 ~d~Vih~a~~~~~-~~~~~~---------------------------------------------------~~Y~~sK~~ 107 (258)
.+++|||||+... ...... ..|..+|++
T Consensus 79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAa 158 (245)
T COG3967 79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAA 158 (245)
T ss_pred hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHH
Confidence 6999999998532 111111 569999998
Q ss_pred HHHHHHHHH---HHcCCcEEEEcCCccccC
Q 025065 108 AEEAAWKFA---KENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 108 ~e~~~~~~~---~~~~~~~~ilRp~~v~G~ 134 (258)
...+...+. +..++++.=+-|+.|-.+
T Consensus 159 iHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 159 IHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 877655554 345788888888888764
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.8e-11 Score=88.99 Aligned_cols=122 Identities=22% Similarity=0.222 Sum_probs=90.8
Q ss_pred CCcEEEEECC-cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 7 EEKVVCVTGA-SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 7 ~~~~ilItGa-~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
..++|||||+ .|.||.+|++++.++|+.|++..|+.++... +.. ..++...+.|+++++++..+..
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~--L~~----~~gl~~~kLDV~~~~~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQ--LAI----QFGLKPYKLDVSKPEEVVTVSGEVRANPD 79 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhh--HHH----hhCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence 3578999876 5999999999999999999999998876532 211 1367889999999998887643
Q ss_pred -CCcEEEecCCCCCCC--CCCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFL--SDNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~--~~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
..|+++|+||..-.. .+.+. +.|..||++.
T Consensus 80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAi 159 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAI 159 (289)
T ss_pred CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHH
Confidence 369999999985221 11111 7799999987
Q ss_pred HHHHHHHHH---HcCCcEEEEcCCccccC
Q 025065 109 EEAAWKFAK---ENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 109 e~~~~~~~~---~~~~~~~ilRp~~v~G~ 134 (258)
..+.+.+.- -+|++++.+-+|.|-..
T Consensus 160 hay~~tLrlEl~PFgv~Vin~itGGv~T~ 188 (289)
T KOG1209|consen 160 HAYARTLRLELKPFGVRVINAITGGVATD 188 (289)
T ss_pred HHhhhhcEEeeeccccEEEEecccceecc
Confidence 776554432 35888888888887654
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-10 Score=95.07 Aligned_cols=78 Identities=21% Similarity=0.179 Sum_probs=59.4
Q ss_pred EEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCcEE
Q 025065 12 CVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCDGV 83 (258)
Q Consensus 12 lItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~V 83 (258)
+||||++.||.+++++|.++| ++|++.+|+..... .....+......+.++.+|+++.+++.++++ .+|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAE-RAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 599999999999999999999 99999988754321 1112221123467888999999988877653 47999
Q ss_pred EecCCCC
Q 025065 84 FHTASPV 90 (258)
Q Consensus 84 ih~a~~~ 90 (258)
||+||..
T Consensus 80 InnAG~~ 86 (308)
T PLN00015 80 VCNAAVY 86 (308)
T ss_pred EECCCcC
Confidence 9999974
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.6e-10 Score=87.10 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=75.5
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-----
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV----- 77 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----- 77 (258)
.+.+++++++||||+|.||+++++.|.++|++|++.+|+.+... ....++...+....++.+|+++.+++.+++
T Consensus 11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~ 89 (169)
T PRK06720 11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQ-ATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN 89 (169)
T ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 34456789999999999999999999999999999998754321 111222122345678899999998887754
Q ss_pred --CCCcEEEecCCCCCC--CCCC-ch---------hhHHHHHHHHHHHH
Q 025065 78 --DGCDGVFHTASPVIF--LSDN-PQ---------EWYSLAKTLAEEAA 112 (258)
Q Consensus 78 --~~~d~Vih~a~~~~~--~~~~-~~---------~~Y~~sK~~~e~~~ 112 (258)
.++|++||+||.... .... .. ..|-.+|..+..+.
T Consensus 90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (169)
T PRK06720 90 AFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFM 138 (169)
T ss_pred HcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHH
Confidence 358999999997532 1111 11 34666777666653
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.6e-11 Score=89.70 Aligned_cols=184 Identities=17% Similarity=0.176 Sum_probs=117.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
+++.+.|++||+|.++++++...||+|.-..|+........+..... -.+++...+.-++....++++.+..++|..+
T Consensus 3 ~k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsgas~~snkid~~~d--ve~e~tlvlggnpfsgs~vlk~A~~vv~svg 80 (283)
T KOG4288|consen 3 PKLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGASPHSNKIDDKQD--VEVEWTLVLGGNPFSGSEVLKNATNVVHSVG 80 (283)
T ss_pred ccceeecccccchhhhhHHHHhcCceEEEeccccCCCcCCCCcchhh--hhHHHHhhhcCCCcchHHHHHHHHhhceeee
Confidence 46889999999999999999999999998888755433222211110 0122334555566666677766555555555
Q ss_pred CCCCCCC--------Cch--------------------------------------------------------------
Q 025065 89 PVIFLSD--------NPQ-------------------------------------------------------------- 98 (258)
Q Consensus 89 ~~~~~~~--------~~~-------------------------------------------------------------- 98 (258)
....+.. .+.
T Consensus 81 ilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyI 160 (283)
T KOG4288|consen 81 ILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNIILMDRINGTANINAVKAAAKAGVPRFVYI 160 (283)
T ss_pred EeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccchHHHHHhccHhhHHHHHHHHHcCCceEEEE
Confidence 4322111 000
Q ss_pred ------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCcc-------HHHHHHHHc---CC-C
Q 025065 99 ------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFG-------AEVILNLIN---GD-Q 155 (258)
Q Consensus 99 ------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~-------~~~~~~~~~---g~-~ 155 (258)
..|-.+|+++|..+ ...++.+-+++|||.+||...-.+.... .....+... .+ +
T Consensus 161 Sa~d~~~~~~i~rGY~~gKR~AE~El---l~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp 237 (283)
T KOG4288|consen 161 SAHDFGLPPLIPRGYIEGKREAEAEL---LKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLP 237 (283)
T ss_pred EhhhcCCCCccchhhhccchHHHHHH---HHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCc
Confidence 56999999999876 4456789999999999998433322111 111122221 11 3
Q ss_pred CCC-CCcceeeHHHHHHHHHHhhcCCCCCceEEEeCCCcCHHHHHHHHHH
Q 025065 156 SFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLRE 204 (258)
Q Consensus 156 ~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~~i~~ 204 (258)
.++ .....+.++++|.+.+.++++|+..|+ +++.|+.+.-.+
T Consensus 238 ~lg~l~~ppvnve~VA~aal~ai~dp~f~Gv-------v~i~eI~~~a~k 280 (283)
T KOG4288|consen 238 LLGPLLAPPVNVESVALAALKAIEDPDFKGV-------VTIEEIKKAAHK 280 (283)
T ss_pred ccccccCCCcCHHHHHHHHHHhccCCCcCce-------eeHHHHHHHHHH
Confidence 344 677899999999999999999987663 455565554433
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-09 Score=89.75 Aligned_cols=175 Identities=15% Similarity=0.030 Sum_probs=104.4
Q ss_pred CCCCCCCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCC------Cccchhhccc--cCcCC-----cEEEEEc
Q 025065 1 MMSGEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPN------SPKTEHLREL--DGATE-----RLHLFKA 65 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~------~~~~~~~~~~--~~~~~-----~~~~~~~ 65 (258)
||...+.+|+++||||+ ..||+++++.|.++|++|++.++.+. .......... ..... .+..+..
T Consensus 1 ~~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (299)
T PRK06300 1 MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA 80 (299)
T ss_pred CCCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence 77777889999999995 89999999999999999998665310 0000000000 00000 0111223
Q ss_pred cCCCcc------------------cHHHHh-------CCCcEEEecCCCCCC---C--CCCch-----------------
Q 025065 66 NLLEEG------------------SFDSAV-------DGCDGVFHTASPVIF---L--SDNPQ----------------- 98 (258)
Q Consensus 66 Dl~~~~------------------~~~~~~-------~~~d~Vih~a~~~~~---~--~~~~~----------------- 98 (258)
|+.+++ ++.+++ .++|++||+||.... . +....
T Consensus 81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~ 160 (299)
T PRK06300 81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL 160 (299)
T ss_pred hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 433333 233333 358999999986321 1 11111
Q ss_pred ----------------------------h-hHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCccccCCcCCCCCccHH
Q 025065 99 ----------------------------E-WYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAE 145 (258)
Q Consensus 99 ----------------------------~-~Y~~sK~~~e~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~ 145 (258)
. .|+.+|...+.+++.++.+ +|+++..+.||.+-.+..... .....
T Consensus 161 ~a~~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~-~~~~~ 239 (299)
T PRK06300 161 SHFGPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAI-GFIER 239 (299)
T ss_pred HHHHHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcc-cccHH
Confidence 2 6999999999999888865 379999999999876532110 00111
Q ss_pred HHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 146 VILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 146 ~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.... ..... ....+...+|++.++.+++...
T Consensus 240 ~~~~-~~~~~---p~~r~~~peevA~~v~~L~s~~ 270 (299)
T PRK06300 240 MVDY-YQDWA---PLPEPMEAEQVGAAAAFLVSPL 270 (299)
T ss_pred HHHH-HHhcC---CCCCCcCHHHHHHHHHHHhCcc
Confidence 1111 11111 1123568899999999988753
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.3e-10 Score=87.32 Aligned_cols=125 Identities=27% Similarity=0.336 Sum_probs=89.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC-CCEEEE-EEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKA-TVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.++.|+||||+..||-.|+++|++. |-++++ ..|+++.. ...++......++++.++.|+++.+++.++++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a-~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV 80 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA-ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV 80 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh-hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence 4577999999999999999999965 556554 44545543 22233322235789999999999887776543
Q ss_pred ---CCcEEEecCCCCCC-CCCC--ch------------------------------------------------------
Q 025065 79 ---GCDGVFHTASPVIF-LSDN--PQ------------------------------------------------------ 98 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~-~~~~--~~------------------------------------------------------ 98 (258)
+.|.+|++||+... .... +.
T Consensus 81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~ 160 (249)
T KOG1611|consen 81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI 160 (249)
T ss_pred ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence 57999999998532 1111 11
Q ss_pred --------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccc
Q 025065 99 --------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVI 132 (258)
Q Consensus 99 --------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~ 132 (258)
..|..||.+...+.+...-+ .++-++.+.||+|-
T Consensus 161 ~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~ 205 (249)
T KOG1611|consen 161 GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ 205 (249)
T ss_pred CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence 67999999988887776543 46888899999985
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=93.29 Aligned_cols=165 Identities=21% Similarity=0.202 Sum_probs=112.1
Q ss_pred CCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh--------CCCcEEE
Q 025065 15 GAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV--------DGCDGVF 84 (258)
Q Consensus 15 Ga~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~~d~Vi 84 (258)
|++ +.||.+++++|+++|++|++.+|+.+... ..+.++... .+.+.+++|+++++++.+++ .++|++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~-~~~~~l~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLA-DALEELAKE-YGAEVIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHH-HHHHHHHHH-TTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHHH-cCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 666 99999999999999999999999876421 111121111 12346999999998888763 4589999
Q ss_pred ecCCCCCCC-CCCch---------------------------------------------------hhHHHHHHHHHHHH
Q 025065 85 HTASPVIFL-SDNPQ---------------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 85 h~a~~~~~~-~~~~~---------------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
|+++..... ...+. ..|+.+|...+.++
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~ 158 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLT 158 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence 999985431 11111 67999999999998
Q ss_pred HHHHHH----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCceE
Q 025065 113 WKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASGRY 186 (258)
Q Consensus 113 ~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~ 186 (258)
+.++.+ +|+++..+.||.+..+..... .....+........ +...+..++|+|.++..++... ...|..
T Consensus 159 r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~-~~~~~~~~~~~~~~----pl~r~~~~~evA~~v~fL~s~~a~~itG~~ 233 (241)
T PF13561_consen 159 RSLAKELAPKKGIRVNAVSPGPIETPMTERI-PGNEEFLEELKKRI----PLGRLGTPEEVANAVLFLASDAASYITGQV 233 (241)
T ss_dssp HHHHHHHGGHGTEEEEEEEESSBSSHHHHHH-HTHHHHHHHHHHHS----TTSSHBEHHHHHHHHHHHHSGGGTTGTSEE
T ss_pred HHHHHHhccccCeeeeeecccceeccchhcc-ccccchhhhhhhhh----ccCCCcCHHHHHHHHHHHhCccccCccCCe
Confidence 888754 589999999999976531110 00111222222111 2334679999999999999865 456654
|
... |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.3e-10 Score=86.03 Aligned_cols=83 Identities=24% Similarity=0.340 Sum_probs=57.5
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCC-Ccc-chhhccccCcCCcEEEEEccCCCcccHHHHhCC-------
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPN-SPK-TEHLRELDGATERLHLFKANLLEEGSFDSAVDG------- 79 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~-~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------- 79 (258)
++|||||+|.||..++++|.+++. +|+++.|+.. ... ...+.++......+.++.+|++|++++.+++..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 589999999999999999999984 8999999832 222 234444444456899999999999999998753
Q ss_pred CcEEEecCCCCCC
Q 025065 80 CDGVFHTASPVIF 92 (258)
Q Consensus 80 ~d~Vih~a~~~~~ 92 (258)
++.|||+|+....
T Consensus 82 i~gVih~ag~~~~ 94 (181)
T PF08659_consen 82 IDGVIHAAGVLAD 94 (181)
T ss_dssp EEEEEE-------
T ss_pred cceeeeeeeeecc
Confidence 5889999998643
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.1e-09 Score=81.69 Aligned_cols=163 Identities=17% Similarity=0.129 Sum_probs=109.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
+.+..+||||+..||+++++.|.++|++|.+.+++...... ....+.. ..+...+.+|+.++.++...++ .
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~a-ta~~L~g-~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ 90 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEA-TAGDLGG-YGDHSAFSCDVSKAHDVQNTLEEMEKSLGT 90 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHH-HHhhcCC-CCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence 34789999999999999999999999999999887764322 1222221 2356678999999887776443 4
Q ss_pred CcEEEecCCCCCCCCCCch----------------------------------------------------hhHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSDNPQ----------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~~~~----------------------------------------------------~~Y~~sK~~ 107 (258)
+++++||||+..+...-.. +.|+.+|.-
T Consensus 91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~G 170 (256)
T KOG1200|consen 91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGG 170 (256)
T ss_pred CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCc
Confidence 8999999999754321111 567666642
Q ss_pred HHH----HHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 108 AEE----AAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 108 ~e~----~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.-- ..++.+ ..++++..+-||.|-.|--.. ..+....++...- +...+-..+|+|..++.+...
T Consensus 171 vIgftktaArEla-~knIrvN~VlPGFI~tpMT~~---mp~~v~~ki~~~i----Pmgr~G~~EevA~~V~fLAS~ 238 (256)
T KOG1200|consen 171 VIGFTKTAARELA-RKNIRVNVVLPGFIATPMTEA---MPPKVLDKILGMI----PMGRLGEAEEVANLVLFLASD 238 (256)
T ss_pred eeeeeHHHHHHHh-hcCceEeEeccccccChhhhh---cCHHHHHHHHccC----CccccCCHHHHHHHHHHHhcc
Confidence 211 222223 348999999999987764221 2344555554443 233466899999999988844
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.1e-09 Score=87.93 Aligned_cols=122 Identities=24% Similarity=0.309 Sum_probs=93.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------- 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------- 78 (258)
..|-|||||+-...|..|+++|.++|+.|.+-...++..+. +..... .++...++.|++++++++++.+
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~--L~~~~~-s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAES--LRGETK-SPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHH--Hhhhhc-CCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 46789999999999999999999999999998854443322 211111 4678889999999999988764
Q ss_pred -CCcEEEecCCCCCCCCCCch--------------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~ 107 (258)
+-=.||||||+........- .+|..||.+
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK~a 184 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSKFA 184 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhHHH
Confidence 23579999997533211111 789999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCcc
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTV 131 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v 131 (258)
.|.+.....++ +|+++.++-||..
T Consensus 185 Veaf~D~lR~EL~~fGV~VsiiePG~f 211 (322)
T KOG1610|consen 185 VEAFSDSLRRELRPFGVKVSIIEPGFF 211 (322)
T ss_pred HHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence 99988777655 6999999999943
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.2e-10 Score=88.21 Aligned_cols=84 Identities=17% Similarity=0.181 Sum_probs=58.3
Q ss_pred CCCcEEEEECCc----------------chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC
Q 025065 6 GEEKVVCVTGAS----------------GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69 (258)
Q Consensus 6 ~~~~~ilItGa~----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 69 (258)
|.+|+||||+|. ||+|++|+++|+++|++|+++++....... .... ......+.++...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~-~~~~----~~~~~~V~s~~d~ 75 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN-DINN----QLELHPFEGIIDL 75 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc-ccCC----ceeEEEEecHHHH
Confidence 357999999886 999999999999999999998764321111 0000 1223445663333
Q ss_pred cccHHHHhC--CCcEEEecCCCCCCCC
Q 025065 70 EGSFDSAVD--GCDGVFHTASPVIFLS 94 (258)
Q Consensus 70 ~~~~~~~~~--~~d~Vih~a~~~~~~~ 94 (258)
.+.+.+++. ++|+|||+||...+..
T Consensus 76 ~~~l~~~~~~~~~D~VIH~AAvsD~~~ 102 (229)
T PRK09620 76 QDKMKSIITHEKVDAVIMAAAGSDWVV 102 (229)
T ss_pred HHHHHHHhcccCCCEEEECccccceec
Confidence 356778784 6899999999966543
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.7e-09 Score=84.49 Aligned_cols=128 Identities=22% Similarity=0.184 Sum_probs=90.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc-cchhhccccCcC-CcEEEEEccCCC-cccHHHHhC----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGAT-ERLHLFKANLLE-EGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~Dl~~-~~~~~~~~~---- 78 (258)
++++++|||||++.||.++++.|.++|+.|++..|+.... ............ ..+.+..+|+++ .++++.+++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999888876542 111111110000 257788899998 777665543
Q ss_pred ---CCcEEEecCCCCCC----CCCCch--------------------------------------------hhHHHHHHH
Q 025065 79 ---GCDGVFHTASPVIF----LSDNPQ--------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~----~~~~~~--------------------------------------------~~Y~~sK~~ 107 (258)
++|+++|+||.... ...... ..|+.||.+
T Consensus 83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~~~~~~~~~Y~~sK~a 162 (251)
T COG1028 83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGLGGPPGQAAYAASKAA 162 (251)
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhcCCCCCcchHHHHHHH
Confidence 48999999998532 111111 258999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCcccc
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIG 133 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G 133 (258)
.+.+.+.++.+ +|+.+..+-||.+-.
T Consensus 163 l~~~~~~l~~e~~~~gi~v~~v~PG~~~t 191 (251)
T COG1028 163 LIGLTKALALELAPRGIRVNAVAPGYIDT 191 (251)
T ss_pred HHHHHHHHHHHHhhhCcEEEEEEeccCCC
Confidence 98888777744 579999999995543
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.5e-09 Score=84.96 Aligned_cols=125 Identities=16% Similarity=0.186 Sum_probs=92.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCccc----HHHHhCC--C
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGS----FDSAVDG--C 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~----~~~~~~~--~ 80 (258)
+=.+|||||..||++.+++|+++|++|+.++|+.++... ..+.+ .....+.++..|.++.+. +++.+.+ +
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~--~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V 127 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEE--KYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV 127 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH--HhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence 457899999999999999999999999999998866533 11111 112458889999998765 4455555 5
Q ss_pred cEEEecCCCCCCCCCCch----------------------------------------------------hhHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSDNPQ----------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 81 d~Vih~a~~~~~~~~~~~----------------------------------------------------~~Y~~sK~~~ 108 (258)
-++|||+|+....+.... +.|+.+|...
T Consensus 128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v 207 (312)
T KOG1014|consen 128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFV 207 (312)
T ss_pred EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHH
Confidence 679999999653211111 7899999988
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCC
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPF 135 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~ 135 (258)
+.+...+.+++ |+.+-.+-|..|-++-
T Consensus 208 ~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 208 DFFSRCLQKEYESKGIFVQSVIPYLVATKM 237 (312)
T ss_pred HHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence 88877777654 7888888888887653
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-08 Score=82.01 Aligned_cols=165 Identities=16% Similarity=0.169 Sum_probs=114.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCC-------
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDG------- 79 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------- 79 (258)
.+|+|||++..+|..++.++..+|++|+++.|+..+... ..++. .....++.+..+|+.+.+++..++++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l-~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELEL-LTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhh-hhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 589999999999999999999999999999998655432 11221 12234578999999999988887753
Q ss_pred CcEEEecCCCCCC--CCCC-ch------------------------------------------------hhHHHHHHHH
Q 025065 80 CDGVFHTASPVIF--LSDN-PQ------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 80 ~d~Vih~a~~~~~--~~~~-~~------------------------------------------------~~Y~~sK~~~ 108 (258)
+|.+|||||..-. -+.. +. +.|+.+|.+.
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al 192 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL 192 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence 6999999998422 1111 11 7899999887
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
..+.....++ +++.++..-|+.+-.|+-...... -....++++ ..-+.+-.+++|.+++.=+.+.+
T Consensus 193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~t-kP~~t~ii~------g~ss~~~~e~~a~~~~~~~~rg~ 261 (331)
T KOG1210|consen 193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKT-KPEETKIIE------GGSSVIKCEEMAKAIVKGMKRGN 261 (331)
T ss_pred HHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccccc-Cchheeeec------CCCCCcCHHHHHHHHHhHHhhcC
Confidence 7666655544 588999999998877743211100 001122222 23445788999999888777654
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.6e-09 Score=77.20 Aligned_cols=163 Identities=13% Similarity=0.100 Sum_probs=106.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|.+|..+|.||||-.|+.|++.+++.+ ..|+++.|+...... ....+.....|....+++.+.++++|+.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a--------t~k~v~q~~vDf~Kl~~~a~~~qg~dV~ 87 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA--------TDKVVAQVEVDFSKLSQLATNEQGPDVL 87 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc--------ccceeeeEEechHHHHHHHhhhcCCceE
Confidence 567889999999999999999999988 489999988533211 0245677788988888888889999999
Q ss_pred EecCCCCCCCCC-Cch------------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 84 FHTASPVIFLSD-NPQ------------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 84 ih~a~~~~~~~~-~~~------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
+.+-|....... +-. -.|-..|-+.|.-+.++-- -.++|+
T Consensus 88 FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrFlY~k~KGEvE~~v~eL~F---~~~~i~ 164 (238)
T KOG4039|consen 88 FCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRFLYMKMKGEVERDVIELDF---KHIIIL 164 (238)
T ss_pred EEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccceeeeeccchhhhhhhhccc---cEEEEe
Confidence 988776533111 100 3478888888877655432 378899
Q ss_pred cCCccccCCcCCCCCccHHHHHHHHcCCCCCC---CCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 127 HPGTVIGPFFQPILNFGAEVILNLINGDQSFA---FPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 127 Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
|||.+.|......... +.-++..+ .++ ++.--..+.-++.+++..+..+...+
T Consensus 165 RPG~ll~~R~esr~ge---flg~~~~a--~l~~~~~R~~s~pv~~~~~amvn~~~~~~~~~ 220 (238)
T KOG4039|consen 165 RPGPLLGERTESRQGE---FLGNLTAA--LLRSRFQRLLSYPVYGDEVAMVNVLNTSGKDK 220 (238)
T ss_pred cCcceecccccccccc---hhhheehh--hhhhHHHhccCCchhhhhHhHhhccccCCccc
Confidence 9999998654322111 12222111 122 22112244456677777666655444
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.3e-07 Score=79.64 Aligned_cols=165 Identities=22% Similarity=0.184 Sum_probs=96.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHH-HHhCC----C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFD-SAVDG----C 80 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~----~ 80 (258)
++.++|||+||||.+|+.+++.|+++|+.|+++.|+...... +............+..|.....+.. .+... .
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~--~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~ 154 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAED--LLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV 154 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhh--hhcccccccccceeeeccccccchhhhhhhhccccc
Confidence 456799999999999999999999999999999998765432 1110111123344444444433332 22221 2
Q ss_pred cEEEecCCCCCCCC--CCch-------------------------------------hhHH------HHHHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS--DNPQ-------------------------------------EWYS------LAKTLAEEAAWKF 115 (258)
Q Consensus 81 d~Vih~a~~~~~~~--~~~~-------------------------------------~~Y~------~sK~~~e~~~~~~ 115 (258)
.+++-+++-.+..+ ..+. +.+. .+|+.+|++
T Consensus 155 ~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~---- 230 (411)
T KOG1203|consen 155 VIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKF---- 230 (411)
T ss_pred eeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHH----
Confidence 34554544433221 1111 2233 566666666
Q ss_pred HHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC--CCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 116 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA--FPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 116 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
.++.|++++|+||+...-....... ...... ..+. ..-..+.-.|+|+..+.++.++...+
T Consensus 231 ~~~Sgl~ytiIR~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~ 294 (411)
T KOG1203|consen 231 LQDSGLPYTIIRPGGLEQDTGGQRE--------VVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATF 294 (411)
T ss_pred HHhcCCCcEEEeccccccCCCCcce--------ecccCccccccccccceeeehhhHHHHHHHHHhhhhhcc
Confidence 6678999999999987643211110 000111 1111 11136778899999999998887655
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2e-08 Score=80.44 Aligned_cols=140 Identities=18% Similarity=0.104 Sum_probs=94.1
Q ss_pred HHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----CCcEEEecCCCCCCCCCCch-
Q 025065 24 LVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----GCDGVFHTASPVIFLSDNPQ- 98 (258)
Q Consensus 24 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~Vih~a~~~~~~~~~~~- 98 (258)
++++|+++|++|++++|+..... ...++++|+++.+++.++++ ++|+|||+||..........
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~ 68 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVA 68 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhh
Confidence 47889999999999998764321 13567899999999988775 58999999997421110000
Q ss_pred ------------------------------------------------------------------hhHHHHHHHHHHHH
Q 025065 99 ------------------------------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 99 ------------------------------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
+.|+.+|...+.+.
T Consensus 69 ~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~ 148 (241)
T PRK12428 69 RVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWT 148 (241)
T ss_pred hhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHH
Confidence 14899999999998
Q ss_pred HHHH-H---HcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 113 WKFA-K---ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 113 ~~~~-~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.++ . .+|+++++++||.+.++.......... ....... .. ....+..++|+|+++..++..+
T Consensus 149 ~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~---~~~~~~~-~~-~~~~~~~pe~va~~~~~l~s~~ 215 (241)
T PRK12428 149 MRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLG---QERVDSD-AK-RMGRPATADEQAAVLVFLCSDA 215 (241)
T ss_pred HHHHHHhhhccCeEEEEeecCCccCcccccchhhhh---hHhhhhc-cc-ccCCCCCHHHHHHHHHHHcChh
Confidence 8877 3 358999999999998874322110000 0000000 01 1223567899999999988643
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.7e-08 Score=100.85 Aligned_cols=128 Identities=16% Similarity=0.144 Sum_probs=94.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCcc---c-----------------------------------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPK---T----------------------------------- 47 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~---~----------------------------------- 47 (258)
+++++|||||+|.||..++++|.++ |.+|++++|++.... +
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4679999999999999999999998 589999999831000 0
Q ss_pred --------hhhccccCcCCcEEEEEccCCCcccHHHHhC------CCcEEEecCCCCCCCC-CC--ch------------
Q 025065 48 --------EHLRELDGATERLHLFKANLLEEGSFDSAVD------GCDGVFHTASPVIFLS-DN--PQ------------ 98 (258)
Q Consensus 48 --------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~Vih~a~~~~~~~-~~--~~------------ 98 (258)
..+..+...+..+.++.+|++|.+.+.+++. ++|.|||+||...... .+ ..
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0011111223568899999999998887664 4899999999854321 11 11
Q ss_pred -------------------------------hhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCccccC
Q 025065 99 -------------------------------EWYSLAKTLAEEAAWKFAKEN-GIDLVAIHPGTVIGP 134 (258)
Q Consensus 99 -------------------------------~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilRp~~v~G~ 134 (258)
..|+.+|...+.+.+.++.+. +++++.+.||.+-|+
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 679999999888887777665 688899999887654
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.85 E-value=8.5e-08 Score=79.86 Aligned_cols=82 Identities=17% Similarity=0.118 Sum_probs=55.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-------CEEEEEEcCCCCccchh-hccccCcCCcEEEEEccCCCcccHHHHhCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-------YTVKATVRDPNSPKTEH-LRELDGATERLHLFKANLLEEGSFDSAVDG 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (258)
..||+||||+|++|++++..|...+ .+|+++++++....... ...+. ........|+....++.+.+++
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~---d~~~~~~~~~~~~~~~~~~l~~ 78 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQ---DCAFPLLKSVVATTDPEEAFKD 78 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehh---hccccccCCceecCCHHHHhCC
Confidence 4589999999999999999999844 58999998654321100 00000 0011223355545677788999
Q ss_pred CcEEEecCCCCCC
Q 025065 80 CDGVFHTASPVIF 92 (258)
Q Consensus 80 ~d~Vih~a~~~~~ 92 (258)
+|+|||+||....
T Consensus 79 aDiVI~tAG~~~~ 91 (325)
T cd01336 79 VDVAILVGAMPRK 91 (325)
T ss_pred CCEEEEeCCcCCC
Confidence 9999999999654
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.6e-08 Score=80.12 Aligned_cols=70 Identities=11% Similarity=0.209 Sum_probs=49.2
Q ss_pred CCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC--cccHHHHhCCCcEEEecCCCCCC
Q 025065 15 GASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE--EGSFDSAVDGCDGVFHTASPVIF 92 (258)
Q Consensus 15 Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~Vih~a~~~~~ 92 (258)
.+|||+|++|+++|+++|++|++++|....... ...++.++.++..+ .+.+.+.+.++|+|||+||...+
T Consensus 23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~--------~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~ 94 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPE--------PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDY 94 (229)
T ss_pred ccchHHHHHHHHHHHhCCCEEEEEECcccccCC--------CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCc
Confidence 458999999999999999999999875422110 01345666644332 23455667789999999998653
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.7e-08 Score=72.90 Aligned_cols=170 Identities=16% Similarity=0.155 Sum_probs=118.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++-..+||||...+|..-+++|.++|..|..++...++... ...+ ...++.|...|+++..+++.++. +
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~-vake---lg~~~vf~padvtsekdv~aala~ak~kfgr 83 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGAD-VAKE---LGGKVVFTPADVTSEKDVRAALAKAKAKFGR 83 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchH-HHHH---hCCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence 45678999999999999999999999999999876655432 1122 24678999999999999888764 4
Q ss_pred CcEEEecCCCCCC----CCCCch---------------------------------------------------------
Q 025065 80 CDGVFHTASPVIF----LSDNPQ--------------------------------------------------------- 98 (258)
Q Consensus 80 ~d~Vih~a~~~~~----~~~~~~--------------------------------------------------------- 98 (258)
.|+.+||||+.-. +.....
T Consensus 84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g 163 (260)
T KOG1199|consen 84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG 163 (260)
T ss_pred eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc
Confidence 7999999998421 111111
Q ss_pred -hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHH
Q 025065 99 -EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHI 174 (258)
Q Consensus 99 -~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~ 174 (258)
..|+.||...--+..-.+++ .|++++.+-||.+-.|-.. ..+.-+..++....++| -..-|..+.+..+-
T Consensus 164 qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tplls----slpekv~~fla~~ipfp--srlg~p~eyahlvq 237 (260)
T KOG1199|consen 164 QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLS----SLPEKVKSFLAQLIPFP--SRLGHPHEYAHLVQ 237 (260)
T ss_pred hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhh----hhhHHHHHHHHHhCCCc--hhcCChHHHHHHHH
Confidence 67999997655444333333 3899999999876555433 23333444444433333 22457888888888
Q ss_pred HhhcCCCCCceE
Q 025065 175 RALEVPKASGRY 186 (258)
Q Consensus 175 ~~~~~~~~~~~~ 186 (258)
.+++++...|..
T Consensus 238 aiienp~lngev 249 (260)
T KOG1199|consen 238 AIIENPYLNGEV 249 (260)
T ss_pred HHHhCcccCCeE
Confidence 999999877743
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.6e-08 Score=75.62 Aligned_cols=152 Identities=14% Similarity=0.092 Sum_probs=88.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d 81 (258)
|+++|||||||+|. ++++|.++|++|++.+|++..... ....+.. ...+..+.+|+.|++++.++++ .+|
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~-l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLEN-VKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHH-HHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 47999999998876 999999999999999987543211 1111111 2467889999999998887765 357
Q ss_pred EEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC-
Q 025065 82 GVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA- 158 (258)
Q Consensus 82 ~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~- 158 (258)
.+|+.+-... -+.+..++++.|++----|.-.+.|...... ......+......- .+++
T Consensus 78 ~lv~~vh~~~-----------------~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-~~~~~~~~~~~~~~~~i~lgf 139 (177)
T PRK08309 78 LAVAWIHSSA-----------------KDALSVVCRELDGSSETYRLFHVLGSAASDP-RIPSEKIGPARCSYRRVILGF 139 (177)
T ss_pred EEEEeccccc-----------------hhhHHHHHHHHccCCCCceEEEEeCCcCCch-hhhhhhhhhcCCceEEEEEeE
Confidence 7775544311 1122333555565522223344556543211 00000111101111 2223
Q ss_pred ----CCcceeeHHHHHHHHHHhhcCCC
Q 025065 159 ----FPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 159 ----~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
..--|+.=+.+++.++.+++.+.
T Consensus 140 ~~~~~~~rwlt~~ei~~gv~~~~~~~~ 166 (177)
T PRK08309 140 VLEDTYSRWLTHEEISDGVIKAIESDA 166 (177)
T ss_pred EEeCCccccCchHHHHHHHHHHHhcCC
Confidence 34458888889999999997754
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.6e-07 Score=77.48 Aligned_cols=83 Identities=12% Similarity=0.048 Sum_probs=60.0
Q ss_pred CCcEEEEECCcchHHHH--HHHHHHHCCCEEEEEEcCCCCcc----------chhhc-cccCcCCcEEEEEccCCCcccH
Q 025065 7 EEKVVCVTGASGFVASW--LVKLLLQRGYTVKATVRDPNSPK----------TEHLR-ELDGATERLHLFKANLLEEGSF 73 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~--l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~-~~~~~~~~~~~~~~Dl~~~~~~ 73 (258)
.+|++||||+++.+|.+ ++++| .+|.+|.++++..++.. ...+. .....+..+..+.+|+++++.+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v 118 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK 118 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 36899999999999999 89999 99999988875332111 01111 1111123467889999999887
Q ss_pred HHHhC-------CCcEEEecCCCC
Q 025065 74 DSAVD-------GCDGVFHTASPV 90 (258)
Q Consensus 74 ~~~~~-------~~d~Vih~a~~~ 90 (258)
.++++ ++|++||++|..
T Consensus 119 ~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 119 QKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHhcCCCCEEEECCccC
Confidence 76654 589999999985
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.3e-08 Score=83.94 Aligned_cols=78 Identities=22% Similarity=0.255 Sum_probs=65.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
||+|||+|| |+||+.++.-|++++ ++|++.+|+...... .... ...+++.++.|..+.+.+.+++++.|+|||+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~--i~~~--~~~~v~~~~vD~~d~~al~~li~~~d~VIn~ 75 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCAR--IAEL--IGGKVEALQVDAADVDALVALIKDFDLVINA 75 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHH--HHhh--ccccceeEEecccChHHHHHHHhcCCEEEEe
Confidence 478999999 999999999999998 899999998765432 1111 1237899999999999999999999999999
Q ss_pred CCCC
Q 025065 87 ASPV 90 (258)
Q Consensus 87 a~~~ 90 (258)
+...
T Consensus 76 ~p~~ 79 (389)
T COG1748 76 APPF 79 (389)
T ss_pred CCch
Confidence 8763
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.3e-07 Score=80.66 Aligned_cols=76 Identities=21% Similarity=0.152 Sum_probs=59.4
Q ss_pred CCCcEEEEECC----------------cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC
Q 025065 6 GEEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69 (258)
Q Consensus 6 ~~~~~ilItGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 69 (258)
++++++||||| +|.+|.+++++|..+|++|++++++.... . +.+ ....|+++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~-~---------~~~--~~~~dv~~ 253 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP-T---------PAG--VKRIDVES 253 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc-C---------CCC--cEEEccCC
Confidence 57899999999 99999999999999999999998765211 0 112 34578888
Q ss_pred cccHHHHh----CCCcEEEecCCCCCCC
Q 025065 70 EGSFDSAV----DGCDGVFHTASPVIFL 93 (258)
Q Consensus 70 ~~~~~~~~----~~~d~Vih~a~~~~~~ 93 (258)
.+++.+.+ .++|++||+||...+.
T Consensus 254 ~~~~~~~v~~~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 254 AQEMLDAVLAALPQADIFIMAAAVADYR 281 (399)
T ss_pred HHHHHHHHHHhcCCCCEEEEcccccccc
Confidence 87777655 3589999999986553
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-06 Score=71.92 Aligned_cols=83 Identities=18% Similarity=0.015 Sum_probs=58.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
..+|+||.|+|++|.||+.++..|..++ .++..+++..... ..++ +..... .....+.+++.++.+.++++|+
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g--~a~D-l~~~~~--~~~v~~~td~~~~~~~l~gaDv 79 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPG--VAAD-LSHIDT--PAKVTGYADGELWEKALRGADL 79 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcc--cccc-hhhcCc--CceEEEecCCCchHHHhCCCCE
Confidence 4578899999999999999999998655 6899999832221 1111 111011 2345567776766788999999
Q ss_pred EEecCCCCCC
Q 025065 83 VFHTASPVIF 92 (258)
Q Consensus 83 Vih~a~~~~~ 92 (258)
||+++|....
T Consensus 80 VVitaG~~~~ 89 (321)
T PTZ00325 80 VLICAGVPRK 89 (321)
T ss_pred EEECCCCCCC
Confidence 9999998543
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-07 Score=73.69 Aligned_cols=82 Identities=21% Similarity=0.206 Sum_probs=61.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+++++++|+||+|.+|+.+++.|.+.|++|++++|+..+... ....+.. ..+.....+|..+.+++.+.++++|+||+
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~-l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~diVi~ 103 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQK-AADSLRA-RFGEGVGAVETSDDAARAAAIKGADVVFA 103 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHh-hcCCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence 467899999999999999999999999999999987533211 1111110 11344566788888888899999999999
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 104 at~~ 107 (194)
T cd01078 104 AGAA 107 (194)
T ss_pred CCCC
Confidence 7765
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.56 E-value=3e-07 Score=76.23 Aligned_cols=80 Identities=16% Similarity=0.087 Sum_probs=56.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.+||.|||++|.||+.++..|..++ .++..+++++......-+... .. .....++.+.+++.+.++++|+|||
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~---~~--~~~i~~~~~~~d~~~~l~~aDiVVi 92 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHI---NT--PAQVRGFLGDDQLGDALKGADLVII 92 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhC---Cc--CceEEEEeCCCCHHHHcCCCCEEEE
Confidence 4699999999999999999999776 489999987622211111111 11 2233455555668889999999999
Q ss_pred cCCCCCC
Q 025065 86 TASPVIF 92 (258)
Q Consensus 86 ~a~~~~~ 92 (258)
+||....
T Consensus 93 tAG~~~~ 99 (323)
T PLN00106 93 PAGVPRK 99 (323)
T ss_pred eCCCCCC
Confidence 9998643
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.1e-07 Score=71.61 Aligned_cols=86 Identities=20% Similarity=0.161 Sum_probs=61.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-----CEEEEEEcCCCCccc--hhhccc-cCcCCcEEEEEccCCCcccHHHHh--
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-----YTVKATVRDPNSPKT--EHLREL-DGATERLHLFKANLLEEGSFDSAV-- 77 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~--~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~-- 77 (258)
.|.+||||++..||-+|+.+|++.. ..+...+|+.++... .++... +.....++++..|+++..++..+.
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 3679999999999999999999764 235556777665543 222211 111246899999999987776654
Q ss_pred -----CCCcEEEecCCCCCCC
Q 025065 78 -----DGCDGVFHTASPVIFL 93 (258)
Q Consensus 78 -----~~~d~Vih~a~~~~~~ 93 (258)
+..|.|+-+||+....
T Consensus 83 i~~rf~~ld~iylNAg~~~~~ 103 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNP 103 (341)
T ss_pred HHHHhhhccEEEEccccCCCC
Confidence 3579999999986543
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.51 E-value=8.7e-07 Score=73.69 Aligned_cols=123 Identities=12% Similarity=0.065 Sum_probs=85.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-------EEEEEEcCCCCcc--chhhccccC---cCCcEEEEEccCCCcccHHH
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNSPK--TEHLRELDG---ATERLHLFKANLLEEGSFDS 75 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~--~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~ 75 (258)
.+||.|+|++|.+|+.++..|...|. +++.++....... ...+.-... ...++. ++ ....+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~--~~~~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----IT--DDPNV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Ee--cCcHH
Confidence 46999999999999999999998774 7888887543321 111111100 001111 11 12346
Q ss_pred HhCCCcEEEecCCCCCCCCCCch---------------------------------------------------hhHHHH
Q 025065 76 AVDGCDGVFHTASPVIFLSDNPQ---------------------------------------------------EWYSLA 104 (258)
Q Consensus 76 ~~~~~d~Vih~a~~~~~~~~~~~---------------------------------------------------~~Y~~s 104 (258)
.++++|+||.+||.......... ..||.+
T Consensus 75 ~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t 154 (322)
T cd01338 75 AFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMT 154 (322)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEeh
Confidence 68899999999998533211111 368889
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCccccCCcC
Q 025065 105 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 137 (258)
Q Consensus 105 K~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~ 137 (258)
++..+++...+++..+++...+|...|||++..
T Consensus 155 ~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~ 187 (322)
T cd01338 155 RLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP 187 (322)
T ss_pred HHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence 999999999999999999999999999999743
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.2e-07 Score=68.91 Aligned_cols=162 Identities=17% Similarity=0.122 Sum_probs=103.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEE--EEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVK--ATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
.+.||+||++..||..++..+..++.+.. +..|...+. +.+... ......+..+|++....+.+.+.
T Consensus 6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~--~~L~v~--~gd~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAEL--EGLKVA--YGDDFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccc--cceEEE--ecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence 46789999999999999999988876543 334433331 111111 12344556677776654444432
Q ss_pred CCcEEEecCCCCCCCCCCc---h---------------------------------------------------hhHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNP---Q---------------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~---~---------------------------------------------------~~Y~~s 104 (258)
+-|.|||+||.......-. . ..|+.+
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~ 161 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSS 161 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhh
Confidence 3699999999864421111 1 679999
Q ss_pred HHHHHHHHHHHHHHc--CCcEEEEcCCccccCCcC---C---CCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 105 KTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQ---P---ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 105 K~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~---~---~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
|++-+.+.+..+.+. ++.+..++||.|-.+-.. . ..+....++..+.+ .-+.+...+.++.+..+
T Consensus 162 KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~-------~~~ll~~~~~a~~l~~L 234 (253)
T KOG1204|consen 162 KAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKE-------SGQLLDPQVTAKVLAKL 234 (253)
T ss_pred HHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHh-------cCCcCChhhHHHHHHHH
Confidence 999999988887543 889999999998654211 1 11112223333332 23466788889999998
Q ss_pred hcCC
Q 025065 177 LEVP 180 (258)
Q Consensus 177 ~~~~ 180 (258)
+++.
T Consensus 235 ~e~~ 238 (253)
T KOG1204|consen 235 LEKG 238 (253)
T ss_pred HHhc
Confidence 8876
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.8e-07 Score=77.66 Aligned_cols=74 Identities=26% Similarity=0.248 Sum_probs=53.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC-C-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR-G-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
+++++|+||||+|+||+.++++|..+ | .+++++.|+..+. ..+.. ++..+|+. ++.+.+.++|+|
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl-----~~La~-----el~~~~i~---~l~~~l~~aDiV 219 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERL-----QELQA-----ELGGGKIL---SLEEALPEADIV 219 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHH-----HHHHH-----HhccccHH---hHHHHHccCCEE
Confidence 56789999999999999999999864 5 6898888864332 11111 11123443 366788899999
Q ss_pred EecCCCCCC
Q 025065 84 FHTASPVIF 92 (258)
Q Consensus 84 ih~a~~~~~ 92 (258)
+|+++....
T Consensus 220 v~~ts~~~~ 228 (340)
T PRK14982 220 VWVASMPKG 228 (340)
T ss_pred EECCcCCcC
Confidence 999998554
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.7e-06 Score=68.27 Aligned_cols=100 Identities=17% Similarity=0.180 Sum_probs=70.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~ 86 (258)
|+|||+||||. |+.|+++|.++|++|++..++...... +.. .+...+..+..+.+++.+.++ ++|+|||+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~--~~~-----~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDA 72 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHL--YPI-----HQALTVHTGALDPQELREFLKRHSIDILVDA 72 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccc--ccc-----cCCceEEECCCCHHHHHHHHHhcCCCEEEEc
Confidence 47999999999 999999999999999999887754321 111 123345566677777888885 49999988
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEE-EEcCCc
Q 025065 87 ASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLV-AIHPGT 130 (258)
Q Consensus 87 a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~-ilRp~~ 130 (258)
+-. |+. ...+.+...+++.|+++. ..||.+
T Consensus 73 tHP-----------fA~---~is~~a~~a~~~~~ipylR~eR~~~ 103 (256)
T TIGR00715 73 THP-----------FAA---QITTNATAVCKELGIPYVRFERPPL 103 (256)
T ss_pred CCH-----------HHH---HHHHHHHHHHHHhCCcEEEEECCCC
Confidence 765 322 122223344677799888 458875
|
This enzyme was found to be a monomer by gel filtration. |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.4e-07 Score=77.32 Aligned_cols=76 Identities=29% Similarity=0.523 Sum_probs=57.1
Q ss_pred EEEECCcchHHHHHHHHHHHCC-C-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRG-Y-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|+|.|| |++|+.+++.|.+.+ + +|++.+|+..+... ....+ ...++.+++.|+.|.+++.++++++|+||||++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~-~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAER-LAEKL--LGDRVEAVQVDVNDPESLAELLRGCDVVINCAG 76 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHH-HHT----TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHH-HHhhc--cccceeEEEEecCCHHHHHHHHhcCCEEEECCc
Confidence 789999 999999999999886 4 89999998755322 11110 246899999999999999999999999999998
Q ss_pred CC
Q 025065 89 PV 90 (258)
Q Consensus 89 ~~ 90 (258)
..
T Consensus 77 p~ 78 (386)
T PF03435_consen 77 PF 78 (386)
T ss_dssp GG
T ss_pred cc
Confidence 73
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.3e-05 Score=61.86 Aligned_cols=167 Identities=17% Similarity=0.113 Sum_probs=107.6
Q ss_pred CCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+.+|++||+|-. .-|+..+++.|.++|.++......+.-. .+..++.........++||.++.+.+.++|.
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~--krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~ 81 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLE--KRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK 81 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHH--HHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence 578999999864 5799999999999999998887665222 2222222212234568999999998888775
Q ss_pred --CCcEEEecCCCCCCCC-----CCc-h----------------------------------------------hhHHHH
Q 025065 79 --GCDGVFHTASPVIFLS-----DNP-Q----------------------------------------------EWYSLA 104 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~-----~~~-~----------------------------------------------~~Y~~s 104 (258)
..|.++|+.+..+-.+ .+. . +.-|..
T Consensus 82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGvA 161 (259)
T COG0623 82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVA 161 (259)
T ss_pred hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHHH
Confidence 4799999999864211 110 0 677999
Q ss_pred HHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 105 KTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 105 K~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
|+..|.-++.++.+. |+++..+-.|.|-.--.. .......++.. ..... +.+.-+.++|+......++..
T Consensus 162 KAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAas-gI~~f~~~l~~-~e~~a---Pl~r~vt~eeVG~tA~fLlSd 234 (259)
T COG0623 162 KAALEASVRYLAADLGKEGIRVNAISAGPIRTLAAS-GIGDFRKMLKE-NEANA---PLRRNVTIEEVGNTAAFLLSD 234 (259)
T ss_pred HHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhh-ccccHHHHHHH-HHhhC---CccCCCCHHHhhhhHHHHhcc
Confidence 999999888887664 677776666655321111 01111111222 11111 334456689998888887765
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.4e-05 Score=66.49 Aligned_cols=106 Identities=13% Similarity=0.041 Sum_probs=62.7
Q ss_pred EEEEECCcchHHHHHHHHHHHCC-------CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc-----------c
Q 025065 10 VVCVTGASGFVASWLVKLLLQRG-------YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-----------G 71 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----------~ 71 (258)
||.|+||+|.+|+.++..|...+ ++++.++++.+... .+....|+.+. .
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~-------------~~g~~~Dl~d~~~~~~~~~~i~~ 68 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA-------------LEGVVMELQDCAFPLLKGVVITT 68 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc-------------cceeeeehhhhcccccCCcEEec
Confidence 79999999999999999998765 25888888652111 11122222222 3
Q ss_pred cHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCC
Q 025065 72 SFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKEN-GIDLVAIHPG 129 (258)
Q Consensus 72 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilRp~ 129 (258)
...+.++++|+|||+||................-....++..... ++ +.+..++-.+
T Consensus 69 ~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~-~~~~~~~iiivvs 126 (323)
T cd00704 69 DPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALN-KVAKPTVKVLVVG 126 (323)
T ss_pred ChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHH-HhCCCCeEEEEeC
Confidence 456788999999999998643322222222222223334443333 33 3556555544
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.4e-06 Score=71.65 Aligned_cols=83 Identities=11% Similarity=0.065 Sum_probs=60.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCE-EEEEEcCCC--CccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPN--SPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
+++++++|+|| |.+|++++.+|.+.|.. |++++|+.. .......+++......+.....|+.+.+++.+.+..+|+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 35689999999 89999999999999985 999999763 111111122211123445667888888888888888999
Q ss_pred EEecCCC
Q 025065 83 VFHTASP 89 (258)
Q Consensus 83 Vih~a~~ 89 (258)
|||+...
T Consensus 203 lINaTp~ 209 (289)
T PRK12548 203 LVNATLV 209 (289)
T ss_pred EEEeCCC
Confidence 9998765
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.7e-06 Score=64.87 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=48.5
Q ss_pred CCcEEEEECC----------------cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc
Q 025065 7 EEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70 (258)
Q Consensus 7 ~~~~ilItGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 70 (258)
++++||||+| ||-.|.+|++++..+|++|+.+.....-. . +.+++.+...-...
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~-~---------p~~~~~i~v~sa~e 71 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP-P---------PPGVKVIRVESAEE 71 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEEEEE-SSHHH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc-c---------cccceEEEecchhh
Confidence 5789999975 79999999999999999999988763211 1 23566665433221
Q ss_pred --ccHHHHhCCCcEEEecCCCCCCCC
Q 025065 71 --GSFDSAVDGCDGVFHTASPVIFLS 94 (258)
Q Consensus 71 --~~~~~~~~~~d~Vih~a~~~~~~~ 94 (258)
+.+.+.+.+.|++||+||...+..
T Consensus 72 m~~~~~~~~~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 72 MLEAVKELLPSADIIIMAAAVSDFRP 97 (185)
T ss_dssp HHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred hhhhhccccCcceeEEEecchhheee
Confidence 233445567899999999976543
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.24 E-value=4.3e-06 Score=71.16 Aligned_cols=76 Identities=18% Similarity=0.127 Sum_probs=57.4
Q ss_pred CCCcEEEEECC----------------cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC
Q 025065 6 GEEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69 (258)
Q Consensus 6 ~~~~~ilItGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 69 (258)
++++++||||| ||.+|.+++++|..+|++|+++.+...... +..+ ...|+.+
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~----------~~~~--~~~~v~~ 250 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT----------PPGV--KSIKVST 250 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC----------CCCc--EEEEecc
Confidence 57899999998 478999999999999999999886543211 1122 4578888
Q ss_pred cccH-HHHh----CCCcEEEecCCCCCCC
Q 025065 70 EGSF-DSAV----DGCDGVFHTASPVIFL 93 (258)
Q Consensus 70 ~~~~-~~~~----~~~d~Vih~a~~~~~~ 93 (258)
.+++ .+++ .++|++||+||...+.
T Consensus 251 ~~~~~~~~~~~~~~~~D~~i~~Aavsd~~ 279 (390)
T TIGR00521 251 AEEMLEAALNELAKDFDIFISAAAVADFK 279 (390)
T ss_pred HHHHHHHHHHhhcccCCEEEEcccccccc
Confidence 8777 4444 3589999999997553
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.5e-05 Score=63.05 Aligned_cols=102 Identities=21% Similarity=0.217 Sum_probs=74.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a 87 (258)
|+++|.|+ |-+|+.+++.|.++|++|+++++++..... ... .......+.+|-++++.++++ +.++|+++-+.
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~-~~~----~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t 74 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEE-FLA----DELDTHVVIGDATDEDVLEEAGIDDADAVVAAT 74 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHH-Hhh----hhcceEEEEecCCCHHHHHhcCCCcCCEEEEee
Confidence 57899997 999999999999999999999988755322 011 013578899999999999987 67899999555
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcc
Q 025065 88 SPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTV 131 (258)
Q Consensus 88 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v 131 (258)
+... ... -++.-..+++|++.++.|..+-
T Consensus 75 ~~d~------------~N~---i~~~la~~~~gv~~viar~~~~ 103 (225)
T COG0569 75 GNDE------------VNS---VLALLALKEFGVPRVIARARNP 103 (225)
T ss_pred CCCH------------HHH---HHHHHHHHhcCCCcEEEEecCH
Confidence 5411 111 1222224557999999998764
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.3e-05 Score=63.68 Aligned_cols=70 Identities=16% Similarity=0.071 Sum_probs=49.5
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC-------EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcc-----------
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG----------- 71 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~----------- 71 (258)
+|.|+|++|.+|+.++..|...+. +++.+++.+..... +-+..|+.|..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a-------------~g~~~Dl~d~~~~~~~~~~~~~ 67 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVL-------------EGVVMELMDCAFPLLDGVVPTH 67 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccccc-------------ceeEeehhcccchhcCceeccC
Confidence 589999999999999999997542 68888886544211 12223333332
Q ss_pred cHHHHhCCCcEEEecCCCCCC
Q 025065 72 SFDSAVDGCDGVFHTASPVIF 92 (258)
Q Consensus 72 ~~~~~~~~~d~Vih~a~~~~~ 92 (258)
...+.+.++|+|||+||....
T Consensus 68 ~~~~~~~~aDiVVitAG~~~~ 88 (324)
T TIGR01758 68 DPAVAFTDVDVAILVGAFPRK 88 (324)
T ss_pred ChHHHhCCCCEEEEcCCCCCC
Confidence 345678899999999998643
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.7e-06 Score=67.28 Aligned_cols=64 Identities=11% Similarity=0.079 Sum_probs=45.2
Q ss_pred CCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-------CCCcEEEecC
Q 025065 15 GASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------DGCDGVFHTA 87 (258)
Q Consensus 15 Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~d~Vih~a 87 (258)
.++|.||.+++++|.++|++|+++++..... . .....+|+.+.+...+++ .++|++||+|
T Consensus 22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~------~-------~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA 88 (227)
T TIGR02114 22 HSTGHLGKIITETFLSAGHEVTLVTTKRALK------P-------EPHPNLSIREIETTKDLLITLKELVQEHDILIHSM 88 (227)
T ss_pred CcccHHHHHHHHHHHHCCCEEEEEcChhhcc------c-------ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4589999999999999999999887532110 0 001346777776655443 3589999999
Q ss_pred CCCC
Q 025065 88 SPVI 91 (258)
Q Consensus 88 ~~~~ 91 (258)
|...
T Consensus 89 gv~d 92 (227)
T TIGR02114 89 AVSD 92 (227)
T ss_pred Eecc
Confidence 9754
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0002 Score=59.57 Aligned_cols=115 Identities=17% Similarity=0.102 Sum_probs=66.1
Q ss_pred cEEEEECCcchHHHHHHHHHHH-C--CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 9 KVVCVTGASGFVASWLVKLLLQ-R--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
|||+|+||+|.+|++++..|.. . ++++++++|++.. ....+ .+... .....+.+ .+.+++.+.++++|+||.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~al-Dl~~~-~~~~~i~~--~~~~d~~~~l~~~DiVIi 75 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAV-DLSHI-PTAVKIKG--FSGEDPTPALEGADVVLI 75 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceeh-hhhcC-CCCceEEE--eCCCCHHHHcCCCCEEEE
Confidence 5899999999999999998855 2 4688888876432 11111 11100 11112223 234556677889999999
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCC
Q 025065 86 TASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPG 129 (258)
Q Consensus 86 ~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~ 129 (258)
++|..+.......+............+.... +++.+..++=.+
T Consensus 76 taG~~~~~~~~R~dll~~N~~i~~~ii~~i~-~~~~~~ivivvs 118 (312)
T PRK05086 76 SAGVARKPGMDRSDLFNVNAGIVKNLVEKVA-KTCPKACIGIIT 118 (312)
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HhCCCeEEEEcc
Confidence 9998654333223333333334444444433 446666555433
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.9e-05 Score=69.19 Aligned_cols=77 Identities=26% Similarity=0.198 Sum_probs=56.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+++|+|+|+|+++ +|..+++.|+++|++|++.+++......+...++. ..++.++.+|..+ +...++|+||+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~--~~~~~~~~~~~~~-----~~~~~~d~vv~ 74 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELG--ELGIELVLGEYPE-----EFLEGVDLVVV 74 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH--hcCCEEEeCCcch-----hHhhcCCEEEE
Confidence 4678999999977 99999999999999999998865332111122221 1256777778776 34567999999
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+++..
T Consensus 75 ~~g~~ 79 (450)
T PRK14106 75 SPGVP 79 (450)
T ss_pred CCCCC
Confidence 99874
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.98 E-value=8.2e-06 Score=66.81 Aligned_cols=82 Identities=20% Similarity=0.345 Sum_probs=63.2
Q ss_pred EEEEECCcchHHHHHHHHHHH----CCCEEEEEEcCCCCccchhhccccC-----cCCcEEEEEccCCCcccHHHHhCCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQ----RGYTVKATVRDPNSPKTEHLRELDG-----ATERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
.++|.||+||-|..+++++++ .+...-+..|+..+..+ .++.... ....+ .+.+|.+|++++.+..+++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~-vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~ 84 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQE-VLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQA 84 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHH-HHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhh
Confidence 488999999999999999998 56777778887655432 2222111 12234 8889999999999999999
Q ss_pred cEEEecCCCCCCC
Q 025065 81 DGVFHTASPVIFL 93 (258)
Q Consensus 81 d~Vih~a~~~~~~ 93 (258)
.+|+||+|.....
T Consensus 85 ~vivN~vGPyR~h 97 (423)
T KOG2733|consen 85 RVIVNCVGPYRFH 97 (423)
T ss_pred EEEEeccccceec
Confidence 9999999997553
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.1e-05 Score=49.73 Aligned_cols=39 Identities=13% Similarity=0.039 Sum_probs=27.0
Q ss_pred cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHcC
Q 025065 217 EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKG 255 (258)
Q Consensus 217 ~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~~ 255 (258)
+.+......|++|+ +.|||+| ++++++++++.+|++++.
T Consensus 19 ~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np 59 (62)
T PF13950_consen 19 PGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNP 59 (62)
T ss_dssp TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred CCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence 56777889999999 8899999 999999999999999863
|
... |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00013 Score=61.29 Aligned_cols=111 Identities=14% Similarity=0.091 Sum_probs=72.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCc-------------------cc-hhhccccCcCC--cEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-------------------KT-EHLRELDGATE--RLHL 62 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~-~~~~~~~~~~~--~~~~ 62 (258)
++.++|+|.|+ |-+|+++++.|...|. ++++++++.-+. +. .....+...++ .++.
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 35678999998 7799999999999997 888888864211 00 00011112223 3555
Q ss_pred EEccCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccC
Q 025065 63 FKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 63 ~~~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~ 134 (258)
+..|++ .+.+.++++++|+||.+... -.++. ++.+++.+++++++.......+|.
T Consensus 101 ~~~~~~-~~~~~~~~~~~DlVid~~D~------------~~~r~----~in~~~~~~~ip~i~~~~~g~~G~ 155 (338)
T PRK12475 101 VVTDVT-VEELEELVKEVDLIIDATDN------------FDTRL----LINDLSQKYNIPWIYGGCVGSYGV 155 (338)
T ss_pred EeccCC-HHHHHHHhcCCCEEEEcCCC------------HHHHH----HHHHHHHHcCCCEEEEEecccEEE
Confidence 666775 35678888999999987744 12233 344457778899887766666663
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00065 Score=56.55 Aligned_cols=82 Identities=20% Similarity=0.227 Sum_probs=53.7
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchhh--ccccCcCCcEEEEEccCCCcccHHHH
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHL--RELDGATERLHLFKANLLEEGSFDSA 76 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (258)
||+. .++||.|+|+ |.+|+.++..|...|. ++..++++.+....... +.......++.... ..+ +.
T Consensus 1 ~~~~--~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~------~~~-~~ 70 (315)
T PRK00066 1 MMKK--QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA------GDY-SD 70 (315)
T ss_pred CCCC--CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe------CCH-HH
Confidence 6666 4689999998 9999999999998885 79999986654322111 11110011222221 223 34
Q ss_pred hCCCcEEEecCCCCCC
Q 025065 77 VDGCDGVFHTASPVIF 92 (258)
Q Consensus 77 ~~~~d~Vih~a~~~~~ 92 (258)
++++|+||-+||....
T Consensus 71 ~~~adivIitag~~~k 86 (315)
T PRK00066 71 CKDADLVVITAGAPQK 86 (315)
T ss_pred hCCCCEEEEecCCCCC
Confidence 7899999999998543
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00039 Score=50.80 Aligned_cols=77 Identities=23% Similarity=0.182 Sum_probs=50.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhh--ccccCcC-CcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHL--RELDGAT-ERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|||.|+|++|.+|++++..|...+ .+++.++++........+ ....... ....... .+ .+.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GD----YEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SS----GGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cc----ccccccccEE
Confidence 589999999999999999999887 589999987543221111 1111101 1122222 22 2347789999
Q ss_pred EecCCCCCC
Q 025065 84 FHTASPVIF 92 (258)
Q Consensus 84 ih~a~~~~~ 92 (258)
|-++|....
T Consensus 74 vitag~~~~ 82 (141)
T PF00056_consen 74 VITAGVPRK 82 (141)
T ss_dssp EETTSTSSS
T ss_pred EEecccccc
Confidence 999998643
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.78 E-value=3.6e-05 Score=55.85 Aligned_cols=77 Identities=22% Similarity=0.225 Sum_probs=52.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.++++++|.|+ |..|+.++.+|.+.|. +|+++.|+..+... +.+.- ....+.++. + +++.+.+.++|+||
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~--l~~~~-~~~~~~~~~--~---~~~~~~~~~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEA--LAEEF-GGVNIEAIP--L---EDLEEALQEADIVI 80 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHH--HHHHH-TGCSEEEEE--G---GGHCHHHHTESEEE
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHH--HHHHc-Cccccceee--H---HHHHHHHhhCCeEE
Confidence 46899999998 8899999999999996 49999997644322 11100 012334433 2 34557778899999
Q ss_pred ecCCCCC
Q 025065 85 HTASPVI 91 (258)
Q Consensus 85 h~a~~~~ 91 (258)
++.+...
T Consensus 81 ~aT~~~~ 87 (135)
T PF01488_consen 81 NATPSGM 87 (135)
T ss_dssp E-SSTTS
T ss_pred EecCCCC
Confidence 9988744
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00015 Score=51.47 Aligned_cols=73 Identities=21% Similarity=0.274 Sum_probs=41.5
Q ss_pred EEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCC-Cccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 10 VVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPN-SPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~-~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
||.|+||||++|+.|++.|.+.. +++..+..+.. ..+. ....... .........+ .+. +.+.++|+||.|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~-~~~----~~~~~~Dvvf~a 73 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHP--KGFEDLSVED-ADP----EELSDVDVVFLA 73 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGG--TTTEEEBEEE-TSG----HHHTTESEEEE-
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccc--ccccceeEee-cch----hHhhcCCEEEec
Confidence 68999999999999999999865 46655444333 3322 1111100 0111221122 222 234889999988
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
...
T Consensus 74 ~~~ 76 (121)
T PF01118_consen 74 LPH 76 (121)
T ss_dssp SCH
T ss_pred Cch
Confidence 665
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=6.7e-05 Score=63.02 Aligned_cols=37 Identities=22% Similarity=0.366 Sum_probs=30.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC---EEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY---TVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~ 44 (258)
|++|+|.||||++|++|++.|.+++| ++.++.+....
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~ 40 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSA 40 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC
Confidence 36899999999999999999999876 45777765443
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00039 Score=58.42 Aligned_cols=109 Identities=19% Similarity=0.231 Sum_probs=69.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCc-------------------cc-hhhccccCcCC--cEEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-------------------KT-EHLRELDGATE--RLHLF 63 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~-~~~~~~~~~~~--~~~~~ 63 (258)
+.++|+|.|+ |.+|++++..|...|. ++++++.+.-+. +. .....+...++ .++.+
T Consensus 23 ~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~ 101 (339)
T PRK07688 23 REKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAI 101 (339)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 4578999998 9999999999999997 899998763111 10 00111222233 35556
Q ss_pred EccCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 64 KANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 64 ~~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
..+++. +.+.++++++|+||.+... + .++. .+.+++.+.+++++..-....+|
T Consensus 102 ~~~~~~-~~~~~~~~~~DlVid~~Dn-----------~-~~r~----~ln~~~~~~~iP~i~~~~~g~~G 154 (339)
T PRK07688 102 VQDVTA-EELEELVTGVDLIIDATDN-----------F-ETRF----IVNDAAQKYGIPWIYGACVGSYG 154 (339)
T ss_pred eccCCH-HHHHHHHcCCCEEEEcCCC-----------H-HHHH----HHHHHHHHhCCCEEEEeeeeeee
Confidence 666654 4567788999999988554 1 1222 34444666788877655444444
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.73 E-value=6.8e-05 Score=63.84 Aligned_cols=38 Identities=26% Similarity=0.476 Sum_probs=32.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~ 44 (258)
+++||.|.||||++|++|++.|.++ .++|+.+.+....
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa 75 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA 75 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence 3568999999999999999999988 4799988875433
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.71 E-value=9.9e-05 Score=64.76 Aligned_cols=74 Identities=16% Similarity=0.157 Sum_probs=58.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a 87 (258)
|+|+|+|+ |.+|+++++.|.+.|++|+++++++.... .+.. ..++.++.+|.++.+.+.++ +.++|+||-+.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~--~~~~----~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLR--RLQD----RLDVRTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHH--HHHh----hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 47999998 99999999999999999999998764421 1111 13578899999999888887 77899888765
Q ss_pred CC
Q 025065 88 SP 89 (258)
Q Consensus 88 ~~ 89 (258)
..
T Consensus 74 ~~ 75 (453)
T PRK09496 74 DS 75 (453)
T ss_pred CC
Confidence 43
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00073 Score=52.54 Aligned_cols=110 Identities=15% Similarity=0.087 Sum_probs=68.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---h---------------hhccccCcCCcEE--EEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---E---------------HLRELDGATERLH--LFK 64 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~---------------~~~~~~~~~~~~~--~~~ 64 (258)
++.++|+|.|+ |-+|+++++.|...|. ++++++.+.-...- + ..+.+...++.++ .+.
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 35678999996 9999999999999995 88888876321110 0 0112222233333 333
Q ss_pred ccCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 65 ~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
.++. .+.+.+.++++|+||.+... ..++ ..+.+++.++++++........+|
T Consensus 98 ~~i~-~~~~~~~~~~~D~Vi~~~d~------------~~~r----~~l~~~~~~~~ip~i~~~~~g~~G 149 (202)
T TIGR02356 98 ERVT-AENLELLINNVDLVLDCTDN------------FATR----YLINDACVALGTPLISAAVVGFGG 149 (202)
T ss_pred hcCC-HHHHHHHHhCCCEEEECCCC------------HHHH----HHHHHHHHHcCCCEEEEEeccCeE
Confidence 3443 34567788899999987644 1122 234445677788887766555555
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00099 Score=51.63 Aligned_cols=112 Identities=13% Similarity=0.153 Sum_probs=69.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh-----------------ccccCcCCcE--EEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL-----------------RELDGATERL--HLF 63 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~-----------------~~~~~~~~~~--~~~ 63 (258)
+..+|+|.|++| +|+++++.|...|. ++++++.+.-.... +.+ +.+...++.+ +.+
T Consensus 18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~ 96 (198)
T cd01485 18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV 96 (198)
T ss_pred hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 457899999966 99999999999994 68888865322111 101 1122223444 444
Q ss_pred EccCCC-cccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCC
Q 025065 64 KANLLE-EGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 135 (258)
Q Consensus 64 ~~Dl~~-~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~ 135 (258)
..++.+ .+...+.+.++|+||.+... ..++. .+.+++++++++++.......+|.-
T Consensus 97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~------------~~~~~----~ln~~c~~~~ip~i~~~~~G~~G~v 153 (198)
T cd01485 97 EEDSLSNDSNIEEYLQKFTLVIATEEN------------YERTA----KVNDVCRKHHIPFISCATYGLIGYA 153 (198)
T ss_pred ecccccchhhHHHHHhCCCEEEECCCC------------HHHHH----HHHHHHHHcCCCEEEEEeecCEEEE
Confidence 444542 34556677889999966332 11222 2344577789999988877777653
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00037 Score=52.39 Aligned_cols=57 Identities=26% Similarity=0.224 Sum_probs=46.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+++|+|+|+++.+|..+++.|.++|.+|+++.|+. +++.+.+.++|+||.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------------~~l~~~l~~aDiVIs 93 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------------KNLKEHTKQADIVIV 93 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------------hhHHHHHhhCCEEEE
Confidence 5789999999977889999999999999998888752 245667788898888
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+.+..
T Consensus 94 at~~~ 98 (168)
T cd01080 94 AVGKP 98 (168)
T ss_pred cCCCC
Confidence 77763
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00051 Score=60.30 Aligned_cols=76 Identities=24% Similarity=0.405 Sum_probs=57.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih 85 (258)
.+++|+|.|+ |.+|+.+++.|.+.|++|+++++++..... +. ....++..+.+|.++++.+.++ ++++|+||-
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~--~~---~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~ 303 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEE--LA---EELPNTLVLHGDGTDQELLEEEGIDEADAFIA 303 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH--HH---HHCCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence 4688999998 999999999999999999999987643211 11 1123577899999999888654 467999985
Q ss_pred cCC
Q 025065 86 TAS 88 (258)
Q Consensus 86 ~a~ 88 (258)
+..
T Consensus 304 ~~~ 306 (453)
T PRK09496 304 LTN 306 (453)
T ss_pred CCC
Confidence 444
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0011 Score=52.60 Aligned_cols=110 Identities=17% Similarity=0.118 Sum_probs=69.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCcc---chhh---------------ccccCcCC--cEEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK---TEHL---------------RELDGATE--RLHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~~---------------~~~~~~~~--~~~~~~~ 65 (258)
+.++|+|.|+ |.+|+++++.|...|. +++++|.+.-... .+.+ +.+...++ +++.+..
T Consensus 20 ~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~ 98 (228)
T cd00757 20 KNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE 98 (228)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence 4578999997 9999999999999995 7777765432111 0110 11111233 3455555
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccC
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~ 134 (258)
+++ .+.+.+.++++|+||.+.... .+ ...+.+++.+++++++..-....+|.
T Consensus 99 ~i~-~~~~~~~~~~~DvVi~~~d~~------------~~----r~~l~~~~~~~~ip~i~~g~~g~~g~ 150 (228)
T cd00757 99 RLD-AENAEELIAGYDLVLDCTDNF------------AT----RYLINDACVKLGKPLVSGAVLGFEGQ 150 (228)
T ss_pred eeC-HHHHHHHHhCCCEEEEcCCCH------------HH----HHHHHHHHHHcCCCEEEEEeccCEEE
Confidence 553 356777888999999876651 12 23445556777888887766655553
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0013 Score=54.64 Aligned_cols=77 Identities=26% Similarity=0.199 Sum_probs=48.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccc--hhh---ccccCcCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKT--EHL---RELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
|||.|+|++|++|+.++..|+..|+ +|+++++....... ... +.+...+... ++.-..+.+ .+.++|
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-----~i~~~~d~~-~l~~aD 74 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-----EIKISSDLS-DVAGSD 74 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-----EEEECCCHH-HhCCCC
Confidence 5899999999999999999999985 59999985411111 111 1000001111 121112233 488999
Q ss_pred EEEecCCCCC
Q 025065 82 GVFHTASPVI 91 (258)
Q Consensus 82 ~Vih~a~~~~ 91 (258)
+||-+++...
T Consensus 75 iViitag~p~ 84 (309)
T cd05294 75 IVIITAGVPR 84 (309)
T ss_pred EEEEecCCCC
Confidence 9999999854
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00016 Score=68.44 Aligned_cols=77 Identities=17% Similarity=0.094 Sum_probs=57.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CE-------------EEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YT-------------VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS 72 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 72 (258)
.+++|+|.|+ |++|+..++.|.+.+ .+ |++.+++..... .+ ....++++.++.|+.|.++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~--~l---a~~~~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAK--ET---VEGIENAEAVQLDVSDSES 641 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHH--HH---HHhcCCCceEEeecCCHHH
Confidence 4679999998 999999999998753 33 666665543321 11 1111357789999999999
Q ss_pred HHHHhCCCcEEEecCCC
Q 025065 73 FDSAVDGCDGVFHTASP 89 (258)
Q Consensus 73 ~~~~~~~~d~Vih~a~~ 89 (258)
+.++++++|+||++...
T Consensus 642 L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 642 LLKYVSQVDVVISLLPA 658 (1042)
T ss_pred HHHhhcCCCEEEECCCc
Confidence 99999999999998765
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.003 Score=52.83 Aligned_cols=77 Identities=13% Similarity=0.058 Sum_probs=48.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-------EEEEEEcCCCCcc--chhh--cccc-CcCCcEEEEEccCCCcccHHH
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNSPK--TEHL--RELD-GATERLHLFKANLLEEGSFDS 75 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~--~~~~--~~~~-~~~~~~~~~~~Dl~~~~~~~~ 75 (258)
++||.|+|++|.+|+.++..|...+. +++.++..+.... ...+ .... ....++. ++ ....+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~--~~~y~ 76 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----IT--DDPNV 76 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Ee--cChHH
Confidence 57999999999999999999987662 7888887553321 1111 1110 0001111 11 12345
Q ss_pred HhCCCcEEEecCCCCC
Q 025065 76 AVDGCDGVFHTASPVI 91 (258)
Q Consensus 76 ~~~~~d~Vih~a~~~~ 91 (258)
.++++|+||-+||...
T Consensus 77 ~~~daDiVVitaG~~~ 92 (326)
T PRK05442 77 AFKDADVALLVGARPR 92 (326)
T ss_pred HhCCCCEEEEeCCCCC
Confidence 6889999999999754
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0005 Score=55.60 Aligned_cols=68 Identities=21% Similarity=0.275 Sum_probs=46.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
++|.|+|++|.+|+.+++.+.+. +.++.++........... -..++...+++.+++.++|+||+++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------------~~~~i~~~~dl~~ll~~~DvVid~t 68 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------------GALGVAITDDLEAVLADADVLIDFT 68 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------------CCCCccccCCHHHhccCCCEEEECC
Confidence 68999999999999999998864 688877544332211100 1124444566777787899999888
Q ss_pred CC
Q 025065 88 SP 89 (258)
Q Consensus 88 ~~ 89 (258)
..
T Consensus 69 ~p 70 (257)
T PRK00048 69 TP 70 (257)
T ss_pred CH
Confidence 43
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0016 Score=47.11 Aligned_cols=108 Identities=20% Similarity=0.258 Sum_probs=68.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh---------------ccccCcC--CcEEEEEcc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL---------------RELDGAT--ERLHLFKAN 66 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~---------------~~~~~~~--~~~~~~~~D 66 (258)
.++|+|.|+ |-+|+++++.|...|. +++++|.+.-...- ..+ ..+...+ .+++.+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 468999998 9999999999999996 78888865322110 101 0011112 245666666
Q ss_pred CCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 67 LLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 67 l~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
+ +.+...+.++++|+||.+... ..+...+..++.+++++++..-....+|
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~----------------~~~~~~l~~~~~~~~~p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDS----------------LAARLLLNEICREYGIPFIDAGVNGFYG 130 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSS----------------HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred c-ccccccccccCCCEEEEecCC----------------HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence 6 345677888899999987665 2233345556778888887665544444
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0026 Score=49.20 Aligned_cols=109 Identities=13% Similarity=0.142 Sum_probs=67.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh---------------ccccCcCCc--EEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL---------------RELDGATER--LHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~---------------~~~~~~~~~--~~~~~~ 65 (258)
+.++|+|.|++| +|+++++.|...|. +++++|.+.-.... +.+ +.+...++. ++.+..
T Consensus 20 ~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~ 98 (197)
T cd01492 20 RSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD 98 (197)
T ss_pred HhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence 457899999855 99999999999995 68888765322110 110 112222343 444444
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccC
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~ 134 (258)
.+. +...+.++++|+||.+... -.+. ..+.+++++.++++........+|.
T Consensus 99 ~~~--~~~~~~~~~~dvVi~~~~~------------~~~~----~~ln~~c~~~~ip~i~~~~~G~~G~ 149 (197)
T cd01492 99 DIS--EKPEEFFSQFDVVVATELS------------RAEL----VKINELCRKLGVKFYATGVHGLFGF 149 (197)
T ss_pred Ccc--ccHHHHHhCCCEEEECCCC------------HHHH----HHHHHHHHHcCCCEEEEEecCCEEE
Confidence 444 3345677889999966432 1112 2234457778899988777777664
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00052 Score=59.80 Aligned_cols=77 Identities=13% Similarity=0.068 Sum_probs=54.4
Q ss_pred CCCcEEEEECC----------------cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC
Q 025065 6 GEEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69 (258)
Q Consensus 6 ~~~~~ilItGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 69 (258)
+++++||||+| ||-.|.+|++++..+|.+|+.+.-...-. .+.+++.+.++ +
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~----------~p~~v~~i~V~--t 321 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLA----------DPQGVKVIHVE--S 321 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCC----------CCCCceEEEec--C
Confidence 67899999976 79999999999999999999886322110 12356665543 3
Q ss_pred cccHHHHhC---CCcEEEecCCCCCCCC
Q 025065 70 EGSFDSAVD---GCDGVFHTASPVIFLS 94 (258)
Q Consensus 70 ~~~~~~~~~---~~d~Vih~a~~~~~~~ 94 (258)
.+++.+.+. ..|++|++|+..++..
T Consensus 322 a~eM~~av~~~~~~Di~I~aAAVaDyrp 349 (475)
T PRK13982 322 ARQMLAAVEAALPADIAIFAAAVADWRV 349 (475)
T ss_pred HHHHHHHHHhhCCCCEEEEeccccceee
Confidence 444444432 3799999999976643
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0006 Score=55.69 Aligned_cols=56 Identities=18% Similarity=0.154 Sum_probs=46.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.++++++|.|++|.+|+.++..|.++|..|++..|+. .++.+.++++|+||+
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------------~~L~~~~~~aDIvI~ 208 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------------QNLPELVKQADIIVG 208 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------------hhHHHHhccCCEEEE
Confidence 4689999999999999999999999999888877622 125556688999999
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.+.
T Consensus 209 AtG~ 212 (283)
T PRK14192 209 AVGK 212 (283)
T ss_pred ccCC
Confidence 9974
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0052 Score=50.93 Aligned_cols=115 Identities=15% Similarity=0.048 Sum_probs=63.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
|||.|+|++|.+|++++..|...+ .++..++.+ ...-..+. +............ ...+++.+.++++|+||-+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alD-L~~~~~~~~i~~~--~~~~~~y~~~~daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAAD-LSHINTPAKVTGY--LGPEELKKALKGADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehH-hHhCCCcceEEEe--cCCCchHHhcCCCCEEEEe
Confidence 489999999999999999999887 578888876 21111111 1110011111111 0123356778999999999
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCC
Q 025065 87 ASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPG 129 (258)
Q Consensus 87 a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~ 129 (258)
||.....................+.+.... +++.+..++=.+
T Consensus 76 aG~~~k~g~tR~dll~~N~~i~~~i~~~i~-~~~p~a~vivvt 117 (310)
T cd01337 76 AGVPRKPGMTRDDLFNINAGIVRDLATAVA-KACPKALILIIS 117 (310)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HhCCCeEEEEcc
Confidence 998543222222223333333333333332 345555555333
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00064 Score=48.49 Aligned_cols=74 Identities=19% Similarity=0.333 Sum_probs=44.8
Q ss_pred cEEEEECCcchHHHHHHHHHHH-CCCEEEEE-EcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQ-RGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
+||.|.|++|-+|+.+++.+.+ .++++.+. +|++++..-+..-.+.+ .. .....-.+++++++..+|+||++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~----~~--~~~~~v~~~l~~~~~~~DVvIDf 74 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAG----IG--PLGVPVTDDLEELLEEADVVIDF 74 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCT----SS--T-SSBEBS-HHHHTTH-SEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhC----cC--CcccccchhHHHhcccCCEEEEc
Confidence 4899999999999999999998 67887654 55442221111111100 00 11222236788888889999988
Q ss_pred CC
Q 025065 87 AS 88 (258)
Q Consensus 87 a~ 88 (258)
..
T Consensus 75 T~ 76 (124)
T PF01113_consen 75 TN 76 (124)
T ss_dssp S-
T ss_pred CC
Confidence 73
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00033 Score=58.66 Aligned_cols=27 Identities=33% Similarity=0.513 Sum_probs=24.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYT 34 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~ 34 (258)
|++|.|+||||++|++|++.|.+++|.
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP 30 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFP 30 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCC
Confidence 478999999999999999999987654
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0032 Score=52.58 Aligned_cols=77 Identities=14% Similarity=0.037 Sum_probs=49.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-------EEEEEEcCCCC--ccchhhccccC---cCCcEEEEEccCCCcccHHH
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNS--PKTEHLRELDG---ATERLHLFKANLLEEGSFDS 75 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~ 75 (258)
.-||.|+|++|++|++++..|...+. +++.++..... .....+.-... ...++. +. ....+
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~--~~~~~ 75 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-----AT--TDPEE 75 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-----Ee--cChHH
Confidence 46899999999999999999998873 78888886532 11111111100 001111 11 23346
Q ss_pred HhCCCcEEEecCCCCC
Q 025065 76 AVDGCDGVFHTASPVI 91 (258)
Q Consensus 76 ~~~~~d~Vih~a~~~~ 91 (258)
.++++|+||.+||...
T Consensus 76 ~~~daDvVVitAG~~~ 91 (323)
T TIGR01759 76 AFKDVDAALLVGAFPR 91 (323)
T ss_pred HhCCCCEEEEeCCCCC
Confidence 6889999999999854
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00064 Score=58.08 Aligned_cols=67 Identities=21% Similarity=0.337 Sum_probs=53.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
|++|+|.|+ |.+|+.++.++.+.|++|++++.++..+.. .. --.++.+|..|.+.+.++++.+|+|.
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~-~~--------ad~~~~~~~~D~~~l~~~a~~~dvit 68 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAA-QV--------ADEVIVADYDDVAALRELAEQCDVIT 68 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchh-Hh--------CceEEecCCCCHHHHHHHHhcCCEEE
Confidence 468999998 899999999999999999999876544311 11 12456689999999999999999875
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00062 Score=57.28 Aligned_cols=68 Identities=19% Similarity=0.294 Sum_probs=41.3
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEE---EEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVK---ATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
+|+|.||||++|+.|++.|.+++|.+. .+.+....... +. . .+.+....|+. ...+.++|+||-+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~--~~-~----~~~~~~~~~~~-----~~~~~~~D~v~~a 68 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRK--VT-F----KGKELEVNEAK-----IESFEGIDIALFS 68 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCe--ee-e----CCeeEEEEeCC-----hHHhcCCCEEEEC
Confidence 589999999999999999999887654 33354333221 11 1 12344445553 1223566776666
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
++.
T Consensus 69 ~g~ 71 (339)
T TIGR01296 69 AGG 71 (339)
T ss_pred CCH
Confidence 554
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00066 Score=57.28 Aligned_cols=34 Identities=29% Similarity=0.406 Sum_probs=29.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRD 41 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~ 41 (258)
|++|+|+||||++|+.+++.|.+. ++++.++.++
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~ 36 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR 36 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence 468999999999999999999976 5788777664
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00062 Score=58.14 Aligned_cols=35 Identities=26% Similarity=0.492 Sum_probs=32.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
.+++|.|.||+|.+|+.+++.|.+.|++|++.+|+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 35789999999999999999999999999999875
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00038 Score=51.63 Aligned_cols=76 Identities=17% Similarity=0.124 Sum_probs=50.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.++++|+|+|+ |.+|+.+++.|.+.| ++|++.+|+...... ...... ...+..+.. +..+.++++|+||
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~-~~~~~~-----~~~~~~~~~---~~~~~~~~~Dvvi 86 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKA-LAERFG-----ELGIAIAYL---DLEELLAEADLII 86 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHH-HHHHHh-----hcccceeec---chhhccccCCEEE
Confidence 35689999998 999999999999986 789999887543321 111110 010112222 2344578899999
Q ss_pred ecCCCCC
Q 025065 85 HTASPVI 91 (258)
Q Consensus 85 h~a~~~~ 91 (258)
++.....
T Consensus 87 ~~~~~~~ 93 (155)
T cd01065 87 NTTPVGM 93 (155)
T ss_pred eCcCCCC
Confidence 9987743
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0077 Score=50.06 Aligned_cols=76 Identities=18% Similarity=0.196 Sum_probs=49.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccc--hhhccccC-cCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKT--EHLRELDG-ATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
+||.|+|+ |.+|+.++..|+..| ++|++++++...... ..+..... ......... .... .+.++|+|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~------~~~~-~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA------GDYS-DCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc------CCHH-HhCCCCEE
Confidence 47999997 999999999999998 689999997655432 11111100 011122221 1223 46889999
Q ss_pred EecCCCCCC
Q 025065 84 FHTASPVIF 92 (258)
Q Consensus 84 ih~a~~~~~ 92 (258)
|++++....
T Consensus 73 Iitag~~~~ 81 (306)
T cd05291 73 VITAGAPQK 81 (306)
T ss_pred EEccCCCCC
Confidence 999998543
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00018 Score=58.69 Aligned_cols=77 Identities=16% Similarity=0.189 Sum_probs=56.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
..++|-|||||.|.-++++|.++|..-....|+..+... +... -+.++-..++-+++.+++.+.++++|+||+|
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~--l~~~----LG~~~~~~p~~~p~~~~~~~~~~~VVlncvG 80 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDA--LRAS----LGPEAAVFPLGVPAALEAMASRTQVVLNCVG 80 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHH--HHHh----cCccccccCCCCHHHHHHHHhcceEEEeccc
Confidence 468999999999999999999999877666776644321 1110 0122333344458889999999999999999
Q ss_pred CCC
Q 025065 89 PVI 91 (258)
Q Consensus 89 ~~~ 91 (258)
...
T Consensus 81 Pyt 83 (382)
T COG3268 81 PYT 83 (382)
T ss_pred ccc
Confidence 854
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00073 Score=51.96 Aligned_cols=66 Identities=18% Similarity=0.129 Sum_probs=43.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
|++.| ||+|.||+.|+++|.+.||+|++-.|+.++........+. +. ....+...+.+.+|+|+-.
T Consensus 2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~---~~--------i~~~~~~dA~~~aDVVvLA 67 (211)
T COG2085 2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG---PL--------ITGGSNEDAAALADVVVLA 67 (211)
T ss_pred cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc---cc--------cccCChHHHHhcCCEEEEe
Confidence 45555 5579999999999999999999887776554321111110 11 2234456677889999843
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00093 Score=47.88 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=65.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
++++|++.|. | -|.+++..|.+.|++|++++.++..... ... ..+..+.+|+.+++. ++.+++|.|+
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~--a~~-----~~~~~v~dDlf~p~~--~~y~~a~liy-- 82 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEK--AKK-----LGLNAFVDDLFNPNL--EIYKNAKLIY-- 82 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHH--HHH-----hCCeEEECcCCCCCH--HHHhcCCEEE--
Confidence 3578999997 6 8889999999999999999988754211 111 257899999998862 4556788888
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCC
Q 025065 87 ASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPG 129 (258)
Q Consensus 87 a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~ 129 (258)
++... .+...-+.+.+++-+.++.|-=.+
T Consensus 83 -sirpp-------------~el~~~~~~la~~~~~~~~i~~l~ 111 (134)
T PRK04148 83 -SIRPP-------------RDLQPFILELAKKINVPLIIKPLS 111 (134)
T ss_pred -EeCCC-------------HHHHHHHHHHHHHcCCCEEEEcCC
Confidence 22221 122233455567777777655443
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.014 Score=42.93 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=32.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
-.+|+|-||-|-+|++.++.+..++|-|.-++...++
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe 39 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE 39 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc
Confidence 3689999999999999999999999999888876654
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00028 Score=57.95 Aligned_cols=70 Identities=20% Similarity=0.143 Sum_probs=50.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|+|. |.+|+.+++.|...|.+|++.+|++..... ... .+...+ ..+++.+.+.++|+||+
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~--~~~-----~g~~~~-----~~~~l~~~l~~aDiVin 215 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR--ITE-----MGLIPF-----PLNKLEEKVAEIDIVIN 215 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--HHH-----CCCeee-----cHHHHHHHhccCCEEEE
Confidence 46789999998 889999999999999999999987643211 111 111211 23446677889999999
Q ss_pred cCC
Q 025065 86 TAS 88 (258)
Q Consensus 86 ~a~ 88 (258)
+..
T Consensus 216 t~P 218 (287)
T TIGR02853 216 TIP 218 (287)
T ss_pred CCC
Confidence 764
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0018 Score=52.76 Aligned_cols=59 Identities=24% Similarity=0.197 Sum_probs=49.1
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
..++++++|+|+++.+|+.++..|..+|..|++..++. .++.+.++++|+||
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------------~~l~~~~~~ADIVI 206 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------------KDMASYLKDADVIV 206 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHHHhhCCEEE
Confidence 35789999999999999999999999999999887532 13667788899999
Q ss_pred ecCCCCC
Q 025065 85 HTASPVI 91 (258)
Q Consensus 85 h~a~~~~ 91 (258)
.+++..+
T Consensus 207 sAvg~p~ 213 (286)
T PRK14175 207 SAVGKPG 213 (286)
T ss_pred ECCCCCc
Confidence 8888743
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.003 Score=46.96 Aligned_cols=33 Identities=27% Similarity=0.233 Sum_probs=30.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV 39 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~ 39 (258)
+++++|+|.|| |-+|...++.|++.|++|++++
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 57899999998 9999999999999999999884
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0053 Score=51.05 Aligned_cols=80 Identities=23% Similarity=0.262 Sum_probs=49.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
|+||.|+|+ |.+|+.++..|...|. +|++++++++........ +... .........+....++ +.++++|+||.+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~d-l~~~-~~~~~~~~~i~~~~d~-~~~~~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALD-IAEA-APVEGFDTKITGTNDY-EDIAGSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHH-HHhh-hhhcCCCcEEEeCCCH-HHHCCCCEEEEC
Confidence 478999999 9999999999998875 999999866543221111 1000 0000001112212234 357899999999
Q ss_pred CCCCC
Q 025065 87 ASPVI 91 (258)
Q Consensus 87 a~~~~ 91 (258)
++...
T Consensus 78 ~~~p~ 82 (307)
T PRK06223 78 AGVPR 82 (307)
T ss_pred CCCCC
Confidence 88743
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0058 Score=48.83 Aligned_cols=104 Identities=14% Similarity=0.106 Sum_probs=64.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh---------------ccccCcCCcE--EEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL---------------RELDGATERL--HLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~---------------~~~~~~~~~~--~~~~~ 65 (258)
+..+|+|.|+ |.+|++++..|...|. +++++|.+.-+..- +.+ ..+...++.+ +.+..
T Consensus 23 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~ 101 (240)
T TIGR02355 23 KASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA 101 (240)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 4578999998 9999999999999994 78888765433211 111 1111123333 33333
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcC
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHP 128 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp 128 (258)
.++ .+.+.++++++|+||.+... -.++. .+.+++.+++++++.-..
T Consensus 102 ~i~-~~~~~~~~~~~DlVvd~~D~------------~~~r~----~ln~~~~~~~ip~v~~~~ 147 (240)
T TIGR02355 102 KLD-DAELAALIAEHDIVVDCTDN------------VEVRN----QLNRQCFAAKVPLVSGAA 147 (240)
T ss_pred cCC-HHHHHHHhhcCCEEEEcCCC------------HHHHH----HHHHHHHHcCCCEEEEEe
Confidence 333 34567788899999987755 12233 334456677888876443
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.012 Score=48.93 Aligned_cols=78 Identities=21% Similarity=0.150 Sum_probs=49.6
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
||.|+|++|.+|++++..|...+. ++..+++++......-+... .......... +.+++.+.++++|+||-+|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~---~~~~~i~~~~--~~~~~~~~~~daDivvita 75 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHI---PTAASVKGFS--GEEGLENALKGADVVVIPA 75 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcC---CcCceEEEec--CCCchHHHcCCCCEEEEeC
Confidence 589999999999999999998874 78888876622111111111 1111111100 1123567889999999999
Q ss_pred CCCCC
Q 025065 88 SPVIF 92 (258)
Q Consensus 88 ~~~~~ 92 (258)
|....
T Consensus 76 G~~~~ 80 (312)
T TIGR01772 76 GVPRK 80 (312)
T ss_pred CCCCC
Confidence 98543
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.014 Score=42.57 Aligned_cols=107 Identities=21% Similarity=0.210 Sum_probs=65.8
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh---------------ccccCcCCc--EEEEEccCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL---------------RELDGATER--LHLFKANLL 68 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~---------------~~~~~~~~~--~~~~~~Dl~ 68 (258)
+|+|.|+ |-+|+++++.|...|. ++++++.+.-...- +.+ +.+...++. ++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899997 9999999999999996 78888765322110 000 111111233 334444444
Q ss_pred CcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccC
Q 025065 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 69 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~ 134 (258)
+. ...+.++++|+||.+... ......+.+++++.++++........+|.
T Consensus 80 ~~-~~~~~~~~~diVi~~~d~----------------~~~~~~l~~~~~~~~i~~i~~~~~g~~g~ 128 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAIDN----------------IAVRRALNRACKELGIPVIDAGGLGLGGD 128 (143)
T ss_pred hh-hHHHHhcCCCEEEECCCC----------------HHHHHHHHHHHHHcCCCEEEEcCCCcEEE
Confidence 33 235677889999977765 12233344557777888887777665553
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00092 Score=54.73 Aligned_cols=75 Identities=17% Similarity=0.206 Sum_probs=49.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.++++++|+|+ |.+|+.++.+|...| .+|++++|+..+... ....+... ..+.+ +. ...+.+.++|+||
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~-l~~~~~~~-~~~~~---~~----~~~~~~~~~DivI 190 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEE-LAKLFGAL-GKAEL---DL----ELQEELADFDLII 190 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHhhhc-cceee---cc----cchhccccCCEEE
Confidence 45689999997 999999999999999 799999998644321 11111100 00111 11 2345567899999
Q ss_pred ecCCCC
Q 025065 85 HTASPV 90 (258)
Q Consensus 85 h~a~~~ 90 (258)
|+....
T Consensus 191 naTp~g 196 (278)
T PRK00258 191 NATSAG 196 (278)
T ss_pred ECCcCC
Confidence 998764
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.009 Score=47.50 Aligned_cols=110 Identities=19% Similarity=0.224 Sum_probs=69.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh----------------ccccCcCC--cEEEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL----------------RELDGATE--RLHLFK 64 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~----------------~~~~~~~~--~~~~~~ 64 (258)
+..+|+|.|+ |.+|++++..|...|. +++++|.+.-+..- +.+ ..+...++ .++.+.
T Consensus 26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~ 104 (231)
T PRK08328 26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV 104 (231)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence 4578999998 9999999999999995 78888754322110 000 01111123 344444
Q ss_pred ccCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccC
Q 025065 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 65 ~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~ 134 (258)
..+ +.+...++++++|+||.+... ..++. .+.+++.+.+++++.-.....+|.
T Consensus 105 ~~~-~~~~~~~~l~~~D~Vid~~d~------------~~~r~----~l~~~~~~~~ip~i~g~~~g~~G~ 157 (231)
T PRK08328 105 GRL-SEENIDEVLKGVDVIVDCLDN------------FETRY----LLDDYAHKKGIPLVHGAVEGTYGQ 157 (231)
T ss_pred ccC-CHHHHHHHHhcCCEEEECCCC------------HHHHH----HHHHHHHHcCCCEEEEeeccCEEE
Confidence 444 345567778889999977655 12233 344457777899887777666664
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0094 Score=47.82 Aligned_cols=104 Identities=17% Similarity=0.123 Sum_probs=65.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh---------------ccccCcCC--cEEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL---------------RELDGATE--RLHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~---------------~~~~~~~~--~~~~~~~ 65 (258)
+.++|+|.|+ |.+|+++++.|...|. ++++++.+.-+..- +.+ ..+...++ +++.+..
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~ 109 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA 109 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence 4679999998 9999999999999995 78887765322110 101 11122233 3444555
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcC
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHP 128 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp 128 (258)
.++ .+...++++++|+||.+... ..+ ...+.+++.+++++++....
T Consensus 110 ~i~-~~~~~~~~~~~DiVi~~~D~------------~~~----r~~ln~~~~~~~ip~v~~~~ 155 (245)
T PRK05690 110 RLD-DDELAALIAGHDLVLDCTDN------------VAT----RNQLNRACFAAKKPLVSGAA 155 (245)
T ss_pred cCC-HHHHHHHHhcCCEEEecCCC------------HHH----HHHHHHHHHHhCCEEEEeee
Confidence 454 34566778899999988654 112 23444556677888776433
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00051 Score=56.67 Aligned_cols=70 Identities=23% Similarity=0.206 Sum_probs=50.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|+|. |.+|+.++..|...|.+|++.+|++... ..... .+.+++ ..+.+.+.+.++|+||+
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~--~~~~~-----~G~~~~-----~~~~l~~~l~~aDiVI~ 216 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL--ARITE-----MGLSPF-----HLSELAEEVGKIDIIFN 216 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHH-----cCCeee-----cHHHHHHHhCCCCEEEE
Confidence 35789999997 8899999999999999999999885432 11111 122222 22456777889999999
Q ss_pred cCC
Q 025065 86 TAS 88 (258)
Q Consensus 86 ~a~ 88 (258)
++.
T Consensus 217 t~p 219 (296)
T PRK08306 217 TIP 219 (296)
T ss_pred CCC
Confidence 753
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0024 Score=55.95 Aligned_cols=76 Identities=21% Similarity=0.149 Sum_probs=50.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-CCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-GCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~Vih 85 (258)
.+++++|||++| +|...++.|.+.|++|++.+++..+... ....+.. .++.+..++.. . .++. ++|.||.
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~-~~~~l~~--~g~~~~~~~~~--~---~~~~~~~d~vV~ 74 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENP-EAQELLE--EGIKVICGSHP--L---ELLDEDFDLMVK 74 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchh-HHHHHHh--cCCEEEeCCCC--H---HHhcCcCCEEEE
Confidence 578999999987 9999999999999999999876533211 1111111 23444433211 1 2234 3899999
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
.+|+..
T Consensus 75 s~gi~~ 80 (447)
T PRK02472 75 NPGIPY 80 (447)
T ss_pred CCCCCC
Confidence 998854
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0059 Score=51.78 Aligned_cols=109 Identities=16% Similarity=0.028 Sum_probs=67.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh---------------ccccCcCCc--EEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL---------------RELDGATER--LHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~---------------~~~~~~~~~--~~~~~~ 65 (258)
+..+|+|.|+ |.+|+++++.|...|. ++++++.+.-+..- +.+ ..+...++. ++.+..
T Consensus 27 ~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~ 105 (355)
T PRK05597 27 FDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVR 105 (355)
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEe
Confidence 4579999998 9999999999999995 78888866422110 111 112222343 444445
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
.++. +...++++++|+||.+... -.++.. +..++.+.+++++.......+|
T Consensus 106 ~i~~-~~~~~~~~~~DvVvd~~d~------------~~~r~~----~n~~c~~~~ip~v~~~~~g~~g 156 (355)
T PRK05597 106 RLTW-SNALDELRDADVILDGSDN------------FDTRHL----ASWAAARLGIPHVWASILGFDA 156 (355)
T ss_pred ecCH-HHHHHHHhCCCEEEECCCC------------HHHHHH----HHHHHHHcCCCEEEEEEecCeE
Confidence 5543 4566788899999988755 123333 3344666778777654433333
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.001 Score=46.66 Aligned_cols=71 Identities=21% Similarity=0.337 Sum_probs=52.8
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecCCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTASP 89 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a~~ 89 (258)
|+|.|. |-+|+.+++.|.+.+.+|+++++++..... +. ..++.++.+|.++++.++++ +++++.|+-+...
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~--~~-----~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEE--LR-----EEGVEVIYGDATDPEVLERAGIEKADAVVILTDD 72 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHH--HH-----HTTSEEEES-TTSHHHHHHTTGGCESEEEEESSS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHH--HH-----hcccccccccchhhhHHhhcCccccCEEEEccCC
Confidence 578887 799999999999977799999987644321 11 13578999999999988875 4678888865553
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00069 Score=53.43 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=32.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
|||.|+||+|.+|+.++..|.+.|++|++.+|+++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~ 36 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEK 36 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence 479999999999999999999999999999887644
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0058 Score=52.31 Aligned_cols=109 Identities=17% Similarity=0.086 Sum_probs=67.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCc-----------------cc-hhhccccCcCCcE--EEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KT-EHLRELDGATERL--HLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~-~~~~~~~~~~~~~--~~~~~ 65 (258)
+.++|+|.|+ |.+|++++..|...|. ++++++++.-.. +. ...+.+...++.+ ..+..
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 212 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE 212 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 4578999987 8899999999999996 788888762111 11 0111122223333 34444
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
.+.+ +.+.++++++|+||++.... .++. .+.+++.+.+++++..-....+|
T Consensus 213 ~~~~-~~~~~~~~~~D~Vv~~~d~~------------~~r~----~ln~~~~~~~ip~i~~~~~g~~g 263 (376)
T PRK08762 213 RVTS-DNVEALLQDVDVVVDGADNF------------PTRY----LLNDACVKLGKPLVYGAVFRFEG 263 (376)
T ss_pred cCCh-HHHHHHHhCCCEEEECCCCH------------HHHH----HHHHHHHHcCCCEEEEEeccCEE
Confidence 4433 45667788999999887651 1222 34455777888887765444333
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.01 Score=49.62 Aligned_cols=81 Identities=22% Similarity=0.189 Sum_probs=50.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+||.|+|| |.+|+.++..|...| .+++.++++.+......+..... .........+....+++ .++++|+||.
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~--~~~~~~~~~i~~~~d~~-~l~~ADiVVi 79 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHF--STLVGSNINILGTNNYE-DIKDSDVVVI 79 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhh--ccccCCCeEEEeCCCHH-HhCCCCEEEE
Confidence 4579999997 999999999999888 68888998765432211111000 00000001122223455 6799999999
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
+++...
T Consensus 80 tag~~~ 85 (319)
T PTZ00117 80 TAGVQR 85 (319)
T ss_pred CCCCCC
Confidence 998754
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.003 Score=51.51 Aligned_cols=69 Identities=19% Similarity=0.284 Sum_probs=45.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc---ccHHHHhCCCcEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE---GSFDSAVDGCDGVF 84 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~d~Vi 84 (258)
+++|+|.| .|.||+++++.|.++|+.|.+++++.+......- ...++.+. +........+|+||
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a------------~~lgv~d~~~~~~~~~~~~~aD~Vi 69 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKAA------------LELGVIDELTVAGLAEAAAEADLVI 69 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHH------------hhcCcccccccchhhhhcccCCEEE
Confidence 45777777 7999999999999999999888877655322111 11233332 11244556689998
Q ss_pred ecCCC
Q 025065 85 HTASP 89 (258)
Q Consensus 85 h~a~~ 89 (258)
-+.-+
T Consensus 70 vavPi 74 (279)
T COG0287 70 VAVPI 74 (279)
T ss_pred EeccH
Confidence 65544
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0045 Score=46.00 Aligned_cols=58 Identities=28% Similarity=0.241 Sum_probs=43.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+++|.|.+..+|+.|+..|.++|..|+...... .++++..+++|+||-
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------------------~~l~~~~~~ADIVVs 85 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------------------KNLQEITRRADIVVS 85 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------------------SSHHHHHTTSSEEEE
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------------------CcccceeeeccEEee
Confidence 5789999999999999999999999999998765432 236677788999998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
.+|...
T Consensus 86 a~G~~~ 91 (160)
T PF02882_consen 86 AVGKPN 91 (160)
T ss_dssp -SSSTT
T ss_pred eecccc
Confidence 888754
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0015 Score=54.91 Aligned_cols=28 Identities=21% Similarity=0.443 Sum_probs=24.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYT 34 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~ 34 (258)
+.++|.|.||||++|++|++.|.+++|.
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP 33 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFP 33 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCC
Confidence 3578999999999999999999987763
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0022 Score=55.29 Aligned_cols=71 Identities=15% Similarity=0.183 Sum_probs=53.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 84 (258)
+.|+|+|+|+ |..|..++..+.+.|++|++++.++...... . .-.++..|..|.+.+.++++ ++|.|+
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~-~--------ad~~~~~~~~d~~~l~~~~~~~~id~vi 80 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ-V--------AHRSHVIDMLDGDALRAVIEREKPDYIV 80 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHH-h--------hhheEECCCCCHHHHHHHHHHhCCCEEE
Confidence 3578999997 7999999999999999999998766432111 0 01346778888888888887 799888
Q ss_pred ecC
Q 025065 85 HTA 87 (258)
Q Consensus 85 h~a 87 (258)
-..
T Consensus 81 ~~~ 83 (395)
T PRK09288 81 PEI 83 (395)
T ss_pred Eee
Confidence 643
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0016 Score=55.54 Aligned_cols=75 Identities=17% Similarity=0.106 Sum_probs=54.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
...+++|+|+ |-+|...++.|...|.+|++++|++.+.. .+... .. ..+..+..+.+.+.+.+.++|+||++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~--~l~~~---~g--~~v~~~~~~~~~l~~~l~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLR--QLDAE---FG--GRIHTRYSNAYEIEDAVKRADLLIGA 237 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH--HHHHh---cC--ceeEeccCCHHHHHHHHccCCEEEEc
Confidence 4578999988 99999999999999999999998754321 11110 00 12234556667788888999999998
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
+..
T Consensus 238 ~~~ 240 (370)
T TIGR00518 238 VLI 240 (370)
T ss_pred ccc
Confidence 765
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0011 Score=55.21 Aligned_cols=82 Identities=20% Similarity=0.168 Sum_probs=51.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hh----hccccCcCCcEEEEEccCCCcccHHHHhCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EH----LRELDGATERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
..++|.|.|+ |-+|+.++..|+..|++|++.++++..... .. +..+.............+.-..++.+++.++
T Consensus 6 ~i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~a 84 (321)
T PRK07066 6 DIKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADA 84 (321)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCC
Confidence 4578999997 999999999999999999999987643211 10 1111000000000111222234577788899
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|.|+-++..
T Consensus 85 DlViEavpE 93 (321)
T PRK07066 85 DFIQESAPE 93 (321)
T ss_pred CEEEECCcC
Confidence 999987643
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0029 Score=51.81 Aligned_cols=57 Identities=21% Similarity=0.147 Sum_probs=46.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+|.|.|.+|.+|+.++..|+++|++|++..+... ++.++.+++|+||-
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~----------------------------~l~e~~~~ADIVIs 208 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST----------------------------DAKALCRQADIVVA 208 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC----------------------------CHHHHHhcCCEEEE
Confidence 57899999999999999999999999999999866531 35566677888887
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+.+..
T Consensus 209 avg~~ 213 (301)
T PRK14194 209 AVGRP 213 (301)
T ss_pred ecCCh
Confidence 77663
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.00062 Score=56.64 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=31.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
++|.|+| +|.+|..++..|.++|++|++.+|++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~ 36 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA 36 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence 5799999 599999999999999999999998864
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0098 Score=48.28 Aligned_cols=77 Identities=19% Similarity=0.027 Sum_probs=51.5
Q ss_pred EEEECCcchHHHHHHHHHHHCC----CEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 11 VCVTGASGFVASWLVKLLLQRG----YTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
|.|+||+|.+|..++..|+..| .+|+.++.+.+.... ..++.... . . ....+.-.+++.+.++++|+||
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~--~--~-~~~~i~~~~d~~~~~~~aDiVv 75 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVE--P--L-ADIKVSITDDPYEAFKDADVVI 75 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhh--h--c-cCcEEEECCchHHHhCCCCEEE
Confidence 5689999999999999999988 789999987644332 11111111 1 0 1122222344667789999999
Q ss_pred ecCCCCCC
Q 025065 85 HTASPVIF 92 (258)
Q Consensus 85 h~a~~~~~ 92 (258)
-+++....
T Consensus 76 ~t~~~~~~ 83 (263)
T cd00650 76 ITAGVGRK 83 (263)
T ss_pred ECCCCCCC
Confidence 99987543
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.017 Score=45.00 Aligned_cols=73 Identities=22% Similarity=0.236 Sum_probs=52.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+++++|+|.|| |-+|..-++.|++.|.+|++++....+. +..+.. ..++.++..+... ..+.+++.||-
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~----l~~l~~-~~~i~~~~~~~~~-----~dl~~~~lVi~ 75 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESE----LTLLAE-QGGITWLARCFDA-----DILEGAFLVIA 75 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHH----HHHHHH-cCCEEEEeCCCCH-----HHhCCcEEEEE
Confidence 46789999998 9999999999999999999987544321 111211 1368888877663 34678888885
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.+.
T Consensus 76 at~d 79 (205)
T TIGR01470 76 ATDD 79 (205)
T ss_pred CCCC
Confidence 4444
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0018 Score=54.72 Aligned_cols=30 Identities=30% Similarity=0.470 Sum_probs=25.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHC-CCEEEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKAT 38 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~ 38 (258)
++|.|.||||++|+.+++.|.+. +.++..+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l 31 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYL 31 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEE
Confidence 47999999999999999999976 4677754
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0034 Score=53.29 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=30.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRD 41 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~ 41 (258)
.++|.|.|.+|.||+.+++.|.+. +++|+++++.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~ 38 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPA 38 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence 478999999999999999999975 7899998874
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.022 Score=47.25 Aligned_cols=108 Identities=19% Similarity=0.199 Sum_probs=69.5
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh---------------ccccCcCC--cEEEEEccCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL---------------RELDGATE--RLHLFKANLL 68 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~---------------~~~~~~~~--~~~~~~~Dl~ 68 (258)
||||.|+ |.+|.++++.|+..|. +++++|.+.-+..- +.+ +.+...++ .++.+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5899997 9999999999999995 78888765432211 111 11111123 4566667777
Q ss_pred CcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccC
Q 025065 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 69 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~ 134 (258)
+.....+.++++|+||.+... ..+...+.+++...+++++.......+|.
T Consensus 80 ~~~~~~~f~~~~DvVv~a~Dn----------------~~ar~~in~~c~~~~ip~I~~gt~G~~G~ 129 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALDN----------------LAARRHVNKMCLAADVPLIESGTTGFLGQ 129 (312)
T ss_pred CccchHHHHhcCCEEEECCCC----------------HHHHHHHHHHHHHCCCCEEEEecCcceeE
Confidence 654455778889999976544 22334455557777888877666555553
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0012 Score=55.98 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=29.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~ 42 (258)
++||+|+||||++|++|++.|.+... +++++.++.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 47899999999999999999998764 888875554
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0018 Score=56.54 Aligned_cols=36 Identities=28% Similarity=0.671 Sum_probs=32.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
|+|.|+||+|.+|+.+++.|.+.|++|++++|++..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~ 36 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK 36 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence 479999999999999999999999999999987643
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.017 Score=48.03 Aligned_cols=115 Identities=11% Similarity=0.044 Sum_probs=62.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhh--ccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHL--RELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
.+||.|+|+ |.+|+.++..|...| .+++.++.+........+ +............. ..+++ .++++|+|
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-----~~dy~-~~~~adiv 75 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-----DKDYS-VTANSKVV 75 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-----CCCHH-HhCCCCEE
Confidence 358999997 999999999999877 478888876643322111 11110001112221 12344 37899999
Q ss_pred EecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 84 FHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 84 ih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
|-+||...-............-....+++... .+++.+..++-.++
T Consensus 76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i-~~~~p~~~vivvsN 121 (312)
T cd05293 76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKL-VKYSPNAILLVVSN 121 (312)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHhCCCcEEEEccC
Confidence 99999854322222222222222233333332 33455555555443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.028 Score=46.69 Aligned_cols=112 Identities=17% Similarity=0.124 Sum_probs=65.2
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchhhcccc--CcC--CcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELD--GAT--ERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~--~~~--~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
||.|.|+ |.+|+.++..|+.++. ++..++...+......+.-.. ... .++....+| .+.++++|+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence 5889998 9999999999998873 788888865543322221111 101 133333332 3467899999
Q ss_pred EecCCCCCCCCCC--chhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 84 FHTASPVIFLSDN--PQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 84 ih~a~~~~~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
|-+||........ ..+..........+.+.... +++.+..++-.++
T Consensus 73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~-~~~p~~i~ivvsN 120 (307)
T cd05290 73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNIT-KVTKEAVIILITN 120 (307)
T ss_pred EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHH-HhCCCeEEEEecC
Confidence 9999985432222 12333334444444444433 4455666654444
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0044 Score=48.18 Aligned_cols=73 Identities=18% Similarity=0.134 Sum_probs=47.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+++++|+|.|| |-+|...++.|++.|++|+++++...+. +..+.. ...+.+..-++. .+.+.++|+||-
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~----l~~l~~-~~~i~~~~~~~~-----~~~l~~adlVia 76 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTEN----LVKLVE-EGKIRWKQKEFE-----PSDIVDAFLVIA 76 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHH----HHHHHh-CCCEEEEecCCC-----hhhcCCceEEEE
Confidence 46899999998 9999999999999999999987543221 111110 123455443222 234677898885
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.+.
T Consensus 77 aT~d 80 (202)
T PRK06718 77 ATND 80 (202)
T ss_pred cCCC
Confidence 5443
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.01 Score=46.47 Aligned_cols=80 Identities=19% Similarity=0.257 Sum_probs=51.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCc---cchhh--------------ccccCcCC--cEEEEEcc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP---KTEHL--------------RELDGATE--RLHLFKAN 66 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~--------------~~~~~~~~--~~~~~~~D 66 (258)
+..+|+|.|+ |.+|+++++.|...|. +++++|.+.-+. .++.+ ..+...++ +++.+...
T Consensus 27 ~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~ 105 (212)
T PRK08644 27 KKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEK 105 (212)
T ss_pred hCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeee
Confidence 4578999997 9999999999999996 688888763111 10100 11111123 34445545
Q ss_pred CCCcccHHHHhCCCcEEEecCC
Q 025065 67 LLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 67 l~~~~~~~~~~~~~d~Vih~a~ 88 (258)
+++ +.+.+.++++|+||.+..
T Consensus 106 i~~-~~~~~~~~~~DvVI~a~D 126 (212)
T PRK08644 106 IDE-DNIEELFKDCDIVVEAFD 126 (212)
T ss_pred cCH-HHHHHHHcCCCEEEECCC
Confidence 544 456678889999998843
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.02 Score=45.47 Aligned_cols=107 Identities=15% Similarity=0.149 Sum_probs=66.9
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCcc---chhhc---------------cccCcCC--cEEEEEccCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK---TEHLR---------------ELDGATE--RLHLFKANLL 68 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~~~---------------~~~~~~~--~~~~~~~Dl~ 68 (258)
||||.|+ |.+|.++++.|...|. +++++|.+.-+.. ++.+. .+...++ ++..+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 5899996 9999999999999995 7888886543221 11111 0111122 3566777776
Q ss_pred CcccH-HHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 69 EEGSF-DSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 69 ~~~~~-~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
+.+.+ .+.++++|+||.+... ..+...+..++.+.++++.-......+|
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~Dn----------------~~aR~~ln~~c~~~~iplI~~g~~G~~G 129 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNALDN----------------IIARRYVNGMLIFLIVPLIESGTEGFKG 129 (234)
T ss_pred hhhhchHHHHhCCCEEEECCCC----------------HHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence 54433 4567889999976554 2233444445666678877766665555
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0013 Score=50.11 Aligned_cols=69 Identities=22% Similarity=0.140 Sum_probs=49.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|. |-||+.+++.|..-|.+|++.+|...+... ... ..+ ...++.+++.++|+|+.
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~--~~~-----~~~--------~~~~l~ell~~aDiv~~ 97 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEG--ADE-----FGV--------EYVSLDELLAQADIVSL 97 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHH--HHH-----TTE--------EESSHHHHHHH-SEEEE
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhh--ccc-----ccc--------eeeehhhhcchhhhhhh
Confidence 46799999996 999999999999999999999988754320 000 011 23467888889999887
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+....
T Consensus 98 ~~plt 102 (178)
T PF02826_consen 98 HLPLT 102 (178)
T ss_dssp -SSSS
T ss_pred hhccc
Confidence 77653
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0069 Score=53.69 Aligned_cols=130 Identities=26% Similarity=0.268 Sum_probs=88.1
Q ss_pred CCcEEEEECCc-chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc----CcCCcEEEEEccCCCcccHHHHhC---
Q 025065 7 EEKVVCVTGAS-GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD----GATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 7 ~~~~ilItGa~-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
..+..|||||+ |-||..++..|+.-|..|+++..+-++...++.+.+- ..+..+-.+..+..+..++.++++
T Consensus 395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg 474 (866)
T COG4982 395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG 474 (866)
T ss_pred ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence 45788999975 8999999999999999999887655544333333222 123445666778887777777653
Q ss_pred ------------------CCcEEEecCCCCCC---CCCCch---------------------------------------
Q 025065 79 ------------------GCDGVFHTASPVIF---LSDNPQ--------------------------------------- 98 (258)
Q Consensus 79 ------------------~~d~Vih~a~~~~~---~~~~~~--------------------------------------- 98 (258)
.+|.+|-+|+..-. ....+.
T Consensus 475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS 554 (866)
T COG4982 475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS 554 (866)
T ss_pred cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence 13778888887421 111111
Q ss_pred ---------hhHHHHHHHHHHHHHHHHHHcC----CcEEEEcCCccccCCc
Q 025065 99 ---------EWYSLAKTLAEEAAWKFAKENG----IDLVAIHPGTVIGPFF 136 (258)
Q Consensus 99 ---------~~Y~~sK~~~e~~~~~~~~~~~----~~~~ilRp~~v~G~~~ 136 (258)
..|+.+|...|.++..|..+.+ +..+-.+.|++-|-+.
T Consensus 555 PNrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGL 605 (866)
T COG4982 555 PNRGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGL 605 (866)
T ss_pred CCCCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccc
Confidence 6799999999999988877653 4555556666666554
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.014 Score=48.76 Aligned_cols=78 Identities=17% Similarity=0.226 Sum_probs=50.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccC---cCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDG---ATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
+.+||.|+|+ |.+|+.++..++..|. +|+.++.++.......+..... ......... ..++ +.++++|+
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~-----~~d~-~~l~~aDi 77 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG-----TNNY-EDIAGSDV 77 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE-----CCCH-HHhCCCCE
Confidence 4579999995 9999999999999895 8888998776532222211110 011122221 1224 35789999
Q ss_pred EEecCCCCC
Q 025065 83 VFHTASPVI 91 (258)
Q Consensus 83 Vih~a~~~~ 91 (258)
||.+++...
T Consensus 78 VI~tag~~~ 86 (321)
T PTZ00082 78 VIVTAGLTK 86 (321)
T ss_pred EEECCCCCC
Confidence 999998854
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0062 Score=44.27 Aligned_cols=58 Identities=29% Similarity=0.232 Sum_probs=47.0
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.+++++|+|.|.+.-+|..|+..|.++|..|+...++.. ++.+.++++|+|+
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~----------------------------~l~~~v~~ADIVv 76 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI----------------------------QLQSKVHDADVVV 76 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc----------------------------CHHHHHhhCCEEE
Confidence 357899999999999999999999999999988764331 3556677888888
Q ss_pred ecCCCC
Q 025065 85 HTASPV 90 (258)
Q Consensus 85 h~a~~~ 90 (258)
-..+..
T Consensus 77 sAtg~~ 82 (140)
T cd05212 77 VGSPKP 82 (140)
T ss_pred EecCCC
Confidence 777764
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.013 Score=44.38 Aligned_cols=78 Identities=21% Similarity=0.296 Sum_probs=50.6
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCc---cchh--------------hccccCcCC--cEEEEEccCCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP---KTEH--------------LRELDGATE--RLHLFKANLLE 69 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~--------------~~~~~~~~~--~~~~~~~Dl~~ 69 (258)
+|+|.|+ |.+|+++++.|...|. +++++|.+.-.. .++. ...+...++ +++.+...+..
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 5899997 9999999999999996 688888764111 0000 111111223 34445555544
Q ss_pred cccHHHHhCCCcEEEecCCC
Q 025065 70 EGSFDSAVDGCDGVFHTASP 89 (258)
Q Consensus 70 ~~~~~~~~~~~d~Vih~a~~ 89 (258)
+.+.+.++++|+||.+...
T Consensus 80 -~~~~~~l~~~DlVi~~~d~ 98 (174)
T cd01487 80 -NNLEGLFGDCDIVVEAFDN 98 (174)
T ss_pred -hhHHHHhcCCCEEEECCCC
Confidence 5577888999999988443
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.00077 Score=55.39 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=33.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
+++|.|.|+ |.+|+.++..|+..|++|++++++++..
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~ 41 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA 41 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 468999998 9999999999999999999999987653
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.017 Score=47.10 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=63.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh---------------ccccCcCCc--EEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL---------------RELDGATER--LHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~---------------~~~~~~~~~--~~~~~~ 65 (258)
+..+|+|.|+ |.+|++++..|...|. +++++|.+.-+..- +.+ +.+...++. ++.+..
T Consensus 26 ~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~ 104 (287)
T PRK08223 26 RNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPE 104 (287)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 4578999998 9999999999999995 78777765322210 111 111222343 444554
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
.++ .+...++++++|+||++.-.. ...++.. +.+.+.+.+++++.-
T Consensus 105 ~l~-~~n~~~ll~~~DlVvD~~D~~----------~~~~r~~----ln~~c~~~~iP~V~~ 150 (287)
T PRK08223 105 GIG-KENADAFLDGVDVYVDGLDFF----------EFDARRL----VFAACQQRGIPALTA 150 (287)
T ss_pred ccC-ccCHHHHHhCCCEEEECCCCC----------cHHHHHH----HHHHHHHcCCCEEEE
Confidence 554 456788889999999655331 1123333 344466777777654
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.01 Score=50.59 Aligned_cols=109 Identities=19% Similarity=0.137 Sum_probs=67.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh---------------ccccCcCCc--EEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL---------------RELDGATER--LHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~---------------~~~~~~~~~--~~~~~~ 65 (258)
+..+|+|.|+ |.+|++++..|...|. ++++++.+.-+..- +.+ ..+...++. ++.+..
T Consensus 40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~ 118 (370)
T PRK05600 40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE 118 (370)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence 4578999998 9999999999999995 88888876321110 101 111122333 445555
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
.++ .+...++++++|+||.|... -.++. .+.+++.+.+++++..-....+|
T Consensus 119 ~i~-~~~~~~~~~~~DlVid~~Dn------------~~~r~----~in~~~~~~~iP~v~~~~~g~~G 169 (370)
T PRK05600 119 RLT-AENAVELLNGVDLVLDGSDS------------FATKF----LVADAAEITGTPLVWGTVLRFHG 169 (370)
T ss_pred ecC-HHHHHHHHhCCCEEEECCCC------------HHHHH----HHHHHHHHcCCCEEEEEEecCEE
Confidence 554 34577788999999988766 12333 33444666677776554444443
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.042 Score=45.69 Aligned_cols=75 Identities=25% Similarity=0.314 Sum_probs=48.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchh--hccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEH--LRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
|||.|.|+ |.+|..++..|..+| .+|.+++++........ +.............. .++ +.++++|+||
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~------~d~-~~l~~aDiVi 72 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA------GDY-ADCKGADVVV 72 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee------CCH-HHhCCCCEEE
Confidence 47999998 999999999999999 68999998765432111 111100011112111 123 3578999999
Q ss_pred ecCCCCC
Q 025065 85 HTASPVI 91 (258)
Q Consensus 85 h~a~~~~ 91 (258)
-+++...
T Consensus 73 ita~~~~ 79 (308)
T cd05292 73 ITAGANQ 79 (308)
T ss_pred EccCCCC
Confidence 9999754
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0028 Score=51.70 Aligned_cols=74 Identities=18% Similarity=0.182 Sum_probs=47.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
++++++|+|+ |.+|+.++..|.+.|++|++.+|+..+... ..+.+.. ....... ++.+ ....++|+||++
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~-la~~~~~-~~~~~~~--~~~~-----~~~~~~DivIna 185 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEE-LAERFQR-YGEIQAF--SMDE-----LPLHRVDLIINA 185 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHhh-cCceEEe--chhh-----hcccCccEEEEC
Confidence 3678999998 899999999999999999999887643321 1111110 0111111 1111 123568999999
Q ss_pred CCCC
Q 025065 87 ASPV 90 (258)
Q Consensus 87 a~~~ 90 (258)
....
T Consensus 186 tp~g 189 (270)
T TIGR00507 186 TSAG 189 (270)
T ss_pred CCCC
Confidence 8874
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.00039 Score=52.14 Aligned_cols=36 Identities=25% Similarity=0.356 Sum_probs=30.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
|++|.+.|- |-+|+.+++.|.++||+|++.+|+++.
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~ 36 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEK 36 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHH
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhh
Confidence 478999997 999999999999999999999987644
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.002 Score=53.95 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=30.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
|+|.|.|+ |-+|+.++..|.+.|++|++++|++.
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~ 35 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPE 35 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 57999996 99999999999999999999998653
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0075 Score=46.80 Aligned_cols=78 Identities=17% Similarity=0.253 Sum_probs=52.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcC---CCCccchhh--------------ccccCcCC--cEEEEEcc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRD---PNSPKTEHL--------------RELDGATE--RLHLFKAN 66 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~--------------~~~~~~~~--~~~~~~~D 66 (258)
+.++|+|.|+ |.+|+.++..|...|. +++++|.+ .+...++.+ ..+...++ +++.+..+
T Consensus 20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~ 98 (200)
T TIGR02354 20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK 98 (200)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence 4578999998 8899999999999997 79998877 222111100 01111122 34555556
Q ss_pred CCCcccHHHHhCCCcEEEec
Q 025065 67 LLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 67 l~~~~~~~~~~~~~d~Vih~ 86 (258)
++. +.+.++++++|+||.+
T Consensus 99 i~~-~~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 99 ITE-ENIDKFFKDADIVCEA 117 (200)
T ss_pred CCH-hHHHHHhcCCCEEEEC
Confidence 654 5677788899999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0042 Score=52.11 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=27.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHH-CCCE---EEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQ-RGYT---VKATVR 40 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~-~g~~---V~~~~r 40 (258)
+.++|.|.||||++|+.|++.|.+ ..++ +..+..
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS 41 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS 41 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC
Confidence 356899999999999999999995 5566 555543
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0013 Score=49.01 Aligned_cols=75 Identities=21% Similarity=0.248 Sum_probs=46.3
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc---CcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
||.|.|| |-.|.+++..|.++|++|+...|++.... .++.-. ...++...- ..+.-..+++++++++|+|+-+
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~--~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~Iiia 76 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIE--EINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADIIIIA 76 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHH--HHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEEEE-
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHH--HHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEEEec
Confidence 6899998 99999999999999999999998763221 111100 001111111 1222235678899999999854
Q ss_pred CC
Q 025065 87 AS 88 (258)
Q Consensus 87 a~ 88 (258)
.-
T Consensus 77 vP 78 (157)
T PF01210_consen 77 VP 78 (157)
T ss_dssp S-
T ss_pred cc
Confidence 43
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0093 Score=49.61 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=50.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|- |-||+.+++.|..-|.+|++.++..... +++..+ ...+++.+++.++|+|+.
T Consensus 134 l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~------------~~~~~~----~~~~~l~e~l~~aDvvv~ 196 (312)
T PRK15469 134 REDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSW------------PGVQSF----AGREELSAFLSQTRVLIN 196 (312)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCC------------CCceee----cccccHHHHHhcCCEEEE
Confidence 46789999996 9999999999999999999998754321 111111 134578899999999997
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 197 ~lPl 200 (312)
T PRK15469 197 LLPN 200 (312)
T ss_pred CCCC
Confidence 7665
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0058 Score=50.86 Aligned_cols=36 Identities=28% Similarity=0.287 Sum_probs=32.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
+|+|.|.|+ |-+|+.+++.|.+.||+|++.+|+...
T Consensus 4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~~ 39 (308)
T PRK14619 4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSGL 39 (308)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 578999986 999999999999999999999987643
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.028 Score=45.58 Aligned_cols=103 Identities=17% Similarity=0.281 Sum_probs=63.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccc--hhh----------------ccccCcCCcEEEEEc-c
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKT--EHL----------------RELDGATERLHLFKA-N 66 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~--~~~----------------~~~~~~~~~~~~~~~-D 66 (258)
+..+|+|.|+ |.+|+++++.|...| -++++++.+.-...- .++ +.+...++.++.... +
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~ 107 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD 107 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec
Confidence 4578999997 999999999999999 588888865322110 000 111122344333222 2
Q ss_pred CCCcccHHHHhC-CCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 67 LLEEGSFDSAVD-GCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 67 l~~~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
..+++...+++. ++|+||.+... -.+|.. +.+++.+.++++...
T Consensus 108 ~i~~e~~~~ll~~~~D~VIdaiD~------------~~~k~~----L~~~c~~~~ip~I~~ 152 (268)
T PRK15116 108 FITPDNVAEYMSAGFSYVIDAIDS------------VRPKAA----LIAYCRRNKIPLVTT 152 (268)
T ss_pred ccChhhHHHHhcCCCCEEEEcCCC------------HHHHHH----HHHHHHHcCCCEEEE
Confidence 334556666664 69999987765 233443 334466778888654
|
|
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0043 Score=40.40 Aligned_cols=35 Identities=29% Similarity=0.320 Sum_probs=31.4
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
+|+|.|| |++|-.++..|.+.|.+|+++.+++...
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRLL 35 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence 5889997 9999999999999999999999887554
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0047 Score=52.93 Aligned_cols=69 Identities=17% Similarity=0.221 Sum_probs=52.7
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEecC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHTA 87 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~a 87 (258)
||+|+|+ |..|..+++++.+.|++|++++.++...... + . -.++..|..|++.+.++++ ++|.|+-..
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~-~-------a-d~~~~~~~~d~~~l~~~~~~~~id~v~~~~ 70 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ-V-------A-HRSYVINMLDGDALRAVIEREKPDYIVPEI 70 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhh-h-------C-ceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence 5899996 9999999999999999999998865443211 0 1 1456678888888888887 699988644
Q ss_pred C
Q 025065 88 S 88 (258)
Q Consensus 88 ~ 88 (258)
.
T Consensus 71 e 71 (380)
T TIGR01142 71 E 71 (380)
T ss_pred C
Confidence 3
|
This enzyme is an alternative to PurN (TIGR00639) |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0068 Score=49.76 Aligned_cols=34 Identities=26% Similarity=0.206 Sum_probs=31.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV 39 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~ 39 (258)
..+|+|.|.|.+|.+|+.++..|+++|+.|++..
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~ 189 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH 189 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence 5789999999999999999999999999999874
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0054 Score=51.15 Aligned_cols=67 Identities=16% Similarity=0.230 Sum_probs=53.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+++|.|+|| |.+|+=++.+-...|++|++++-+++.+..+ . --..+..+.+|++.++++.+++|+|=
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~-v--------a~~~i~~~~dD~~al~ela~~~DViT 67 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQ-V--------ADRVIVAAYDDPEALRELAAKCDVIT 67 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhh-c--------ccceeecCCCCHHHHHHHHhhCCEEE
Confidence 367999998 9999999999999999999998655443221 1 12566788889999999999999874
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0036 Score=52.58 Aligned_cols=35 Identities=31% Similarity=0.361 Sum_probs=31.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
+|+|.|.|+ |-+|..++..|.+.|++|++.+|+++
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~ 38 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPE 38 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 468999987 99999999999999999999999654
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0046 Score=52.16 Aligned_cols=76 Identities=20% Similarity=0.183 Sum_probs=50.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----CCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----GCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~ 82 (258)
+++.|||.||+|.+|++.++-+...|..+++..++.+..+. ...+ +.+ ...|..+++..+...+ ++|+
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l--~k~l-----GAd-~vvdy~~~~~~e~~kk~~~~~~Dv 228 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLEL--VKKL-----GAD-EVVDYKDENVVELIKKYTGKGVDV 228 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHH--HHHc-----CCc-EeecCCCHHHHHHHHhhcCCCccE
Confidence 56799999999999999999998888444444444433211 1111 111 2357777554444443 4999
Q ss_pred EEecCCCC
Q 025065 83 VFHTASPV 90 (258)
Q Consensus 83 Vih~a~~~ 90 (258)
|++|++..
T Consensus 229 VlD~vg~~ 236 (347)
T KOG1198|consen 229 VLDCVGGS 236 (347)
T ss_pred EEECCCCC
Confidence 99999984
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0022 Score=57.82 Aligned_cols=71 Identities=23% Similarity=0.212 Sum_probs=55.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a 87 (258)
.+|+|.|+ |-+|++++++|.++|++|++++.+++... ...+ .+...+.+|.++++.++++ ++++|.|+-+.
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~--~~~~-----~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVD--ELRE-----RGIRAVLGNAANEEIMQLAHLDCARWLLLTI 489 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHH--HHHH-----CCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence 57899997 99999999999999999999998764432 2221 3688999999999888764 46788777443
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0087 Score=48.71 Aligned_cols=58 Identities=22% Similarity=0.103 Sum_probs=48.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|+|.+..+|+.|+..|+++|..|++..++. .++.+.++++|+||.
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T----------------------------~~l~~~~~~ADIvi~ 208 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT----------------------------KNLRHHVRNADLLVV 208 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC----------------------------CCHHHHHhhCCEEEE
Confidence 4689999999999999999999999999998876432 136677888999998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
++|...
T Consensus 209 avG~p~ 214 (285)
T PRK10792 209 AVGKPG 214 (285)
T ss_pred cCCCcc
Confidence 888744
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.033 Score=45.98 Aligned_cols=77 Identities=25% Similarity=0.165 Sum_probs=48.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccC---cCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDG---ATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
+||.|+|+ |+||+.++..|..++ .+++.++.......-..+..... .... ..+.+| .+ -+.++++|+|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~----~~-y~~~~~aDiV 73 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD----GD-YEDLKGADIV 73 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCc-eEEecC----CC-hhhhcCCCEE
Confidence 48999999 999999999998776 48999998743332111111100 0011 112222 11 3457899999
Q ss_pred EecCCCCCC
Q 025065 84 FHTASPVIF 92 (258)
Q Consensus 84 ih~a~~~~~ 92 (258)
+-+||...-
T Consensus 74 vitAG~prK 82 (313)
T COG0039 74 VITAGVPRK 82 (313)
T ss_pred EEeCCCCCC
Confidence 999998643
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0061 Score=53.98 Aligned_cols=77 Identities=14% Similarity=-0.009 Sum_probs=51.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+++|+|+|+ |.+|.++++.|.++|++|+++++++..........+. ..+++++.++-.. ...++|.||-
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~--~~gv~~~~~~~~~------~~~~~D~Vv~ 84 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILE--ALGATVRLGPGPT------LPEDTDLVVT 84 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHH--HcCCEEEECCCcc------ccCCCCEEEE
Confidence 45789999998 8999999999999999999998665322111111111 1356666554322 2346899998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
..|+..
T Consensus 85 s~Gi~~ 90 (480)
T PRK01438 85 SPGWRP 90 (480)
T ss_pred CCCcCC
Confidence 888743
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0062 Score=50.06 Aligned_cols=80 Identities=15% Similarity=0.159 Sum_probs=48.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCC-ccchhhc-cccCc-CCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNS-PKTEHLR-ELDGA-TERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~-~~~~~~~-~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
++++++|.|+ |..+++++-.|...|. +|++++|+... .+.+.+. .+... ...+.+ .++.+.+.+.+.+.++|+
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~~aDi 199 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALASADI 199 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcccCCE
Confidence 5689999998 5569999999999885 89999998541 1112221 11100 011222 222222234455678999
Q ss_pred EEecCCC
Q 025065 83 VFHTASP 89 (258)
Q Consensus 83 Vih~a~~ 89 (258)
|||+...
T Consensus 200 vINaTp~ 206 (288)
T PRK12749 200 LTNGTKV 206 (288)
T ss_pred EEECCCC
Confidence 9998755
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0015 Score=56.73 Aligned_cols=73 Identities=18% Similarity=0.178 Sum_probs=51.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
..+++|+|+|+ |-+|+.+++.|...| .+|++++|+...... ..... +...+ +.+++.+.+.++|+||
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~-la~~~-----g~~~i-----~~~~l~~~l~~aDvVi 245 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAED-LAKEL-----GGEAV-----KFEDLEEYLAEADIVI 245 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HHHHc-----CCeEe-----eHHHHHHHHhhCCEEE
Confidence 35689999997 999999999999999 789999987643211 11111 11122 2235667788999999
Q ss_pred ecCCCC
Q 025065 85 HTASPV 90 (258)
Q Consensus 85 h~a~~~ 90 (258)
.+.+..
T Consensus 246 ~aT~s~ 251 (417)
T TIGR01035 246 SSTGAP 251 (417)
T ss_pred ECCCCC
Confidence 987653
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.018 Score=49.97 Aligned_cols=116 Identities=10% Similarity=0.051 Sum_probs=64.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHC-------CC--EEEEEEcCCCCccchhhccccCc---CCcEEEEEccCCCcccHHH
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQR-------GY--TVKATVRDPNSPKTEHLRELDGA---TERLHLFKANLLEEGSFDS 75 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~ 75 (258)
.-||.|+|++|.+|.+++..|... +. ++..++++.+...-..++-.... ..++.+.. . -.+
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~------~-~ye 172 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI------D-PYE 172 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec------C-CHH
Confidence 358999999999999999999987 53 67888876655433222211110 01111111 1 135
Q ss_pred HhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 76 AVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 76 ~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
.++++|+||-+||................-....++.....+-++.+..++-.++
T Consensus 173 ~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN 227 (444)
T PLN00112 173 VFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN 227 (444)
T ss_pred HhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence 6789999999999854322222222222222233333333321356666665554
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.021 Score=49.19 Aligned_cols=109 Identities=17% Similarity=0.035 Sum_probs=65.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCcc---chhh---------------ccccCcCCc--EEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK---TEHL---------------RELDGATER--LHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~~---------------~~~~~~~~~--~~~~~~ 65 (258)
+..+|+|.|+ |.+|++++..|...|. +++++|.+.-+.. ++.+ +.+...++. ++.+..
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 4578999998 9999999999999995 6777775432211 0111 111122343 444555
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
.++. +...++++++|+||.+... -.++.. +.+++.+.+++++......++|
T Consensus 120 ~i~~-~~~~~~~~~~D~Vvd~~d~------------~~~r~~----ln~~~~~~~~p~v~~~~~g~~G 170 (392)
T PRK07878 120 RLDP-SNAVELFSQYDLILDGTDN------------FATRYL----VNDAAVLAGKPYVWGSIYRFEG 170 (392)
T ss_pred cCCh-hHHHHHHhcCCEEEECCCC------------HHHHHH----HHHHHHHcCCCEEEEEeccCEE
Confidence 5553 4466788899999987644 123333 3344556677766544444333
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.066 Score=45.30 Aligned_cols=113 Identities=16% Similarity=0.170 Sum_probs=61.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhh--ccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHL--RELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+||.|+|+ |.+|+.++..|+..+ .++..++.+........+ .......... .+....+++ .++++|+||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-----~i~~~~dy~-~~~daDiVV 110 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-----KILASTDYA-VTAGSDLCI 110 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-----EEEeCCCHH-HhCCCCEEE
Confidence 69999996 999999999999887 478888886544322222 1111001111 221111233 378999999
Q ss_pred ecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCC
Q 025065 85 HTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPG 129 (258)
Q Consensus 85 h~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~ 129 (258)
-+||................-....+.+.... +++.+..++-.+
T Consensus 111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~-~~~p~~ivivvt 154 (350)
T PLN02602 111 VTAGARQIPGESRLNLLQRNVALFRKIIPELA-KYSPDTILLIVS 154 (350)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHH-HHCCCeEEEEec
Confidence 99998543222222222222222333333322 345555555544
|
|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0058 Score=55.16 Aligned_cols=69 Identities=20% Similarity=0.209 Sum_probs=53.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+++|+|+|.|+ |.+|+-+++++.+.|++|++++.++..+.. .. --..+.+|..|.+.+.++.+++|+|.
T Consensus 20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~---~~------AD~~~v~~~~D~~~l~~~a~~~dvIt 88 (577)
T PLN02948 20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPAS---SV------AARHVVGSFDDRAAVREFAKRCDVLT 88 (577)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh---hh------CceeeeCCCCCHHHHHHHHHHCCEEE
Confidence 46789999998 899999999999999999999876543211 10 11345688899888888888888874
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0017 Score=56.00 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=53.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
..+++|+|.|+ |-+|+.++.+|.+.|. ++++..|+..+. ..+... ... +.....+++.+.+.++|+||
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra--~~La~~---~~~-----~~~~~~~~l~~~l~~aDiVI 247 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKA--QKITSA---FRN-----ASAHYLSELPQLIKKADIII 247 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHH--HHHHHH---hcC-----CeEecHHHHHHHhccCCEEE
Confidence 46789999998 9999999999999995 789888876433 112110 000 12223355677888999999
Q ss_pred ecCCCCCC
Q 025065 85 HTASPVIF 92 (258)
Q Consensus 85 h~a~~~~~ 92 (258)
++.+..++
T Consensus 248 ~aT~a~~~ 255 (414)
T PRK13940 248 AAVNVLEY 255 (414)
T ss_pred ECcCCCCe
Confidence 99988543
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0024 Score=52.40 Aligned_cols=75 Identities=20% Similarity=0.231 Sum_probs=48.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
++++++|.|+ |..|++++..|.+.|. +|++++|+..+... ....+........... .+++.+.+.++|+|||
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~-la~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVIn 198 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAA-LADELNARFPAARATA-----GSDLAAALAAADGLVH 198 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHHHHhhCCCeEEEe-----ccchHhhhCCCCEEEE
Confidence 4679999998 7799999999999996 89999987654322 1111111011122211 1334556778999999
Q ss_pred cCC
Q 025065 86 TAS 88 (258)
Q Consensus 86 ~a~ 88 (258)
+..
T Consensus 199 aTp 201 (284)
T PRK12549 199 ATP 201 (284)
T ss_pred CCc
Confidence 953
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.008 Score=49.01 Aligned_cols=72 Identities=19% Similarity=0.194 Sum_probs=45.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|++++|.|.|. |.||+.+++.|.+. ++++.++............... +. ..-.+++++++.++|+|
T Consensus 4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~-----g~------~~~~~~~eell~~~D~V 71 (271)
T PRK13302 4 RPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGL-----RR------PPPVVPLDQLATHADIV 71 (271)
T ss_pred CCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhc-----CC------CcccCCHHHHhcCCCEE
Confidence 56789999997 99999999999873 6888765433222111111110 00 01123466667789999
Q ss_pred EecCCC
Q 025065 84 FHTASP 89 (258)
Q Consensus 84 ih~a~~ 89 (258)
+-++..
T Consensus 72 vi~tp~ 77 (271)
T PRK13302 72 VEAAPA 77 (271)
T ss_pred EECCCc
Confidence 988765
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0014 Score=53.96 Aligned_cols=36 Identities=25% Similarity=0.235 Sum_probs=32.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.++|.|.|+ |.+|+.++..|...|++|++.++++..
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 38 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEA 38 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 478999997 999999999999999999999987643
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0045 Score=51.87 Aligned_cols=35 Identities=29% Similarity=0.335 Sum_probs=27.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC---CEEEEEEcC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG---YTVKATVRD 41 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g---~~V~~~~r~ 41 (258)
++++|.|.||||++|+.|++.|.++. .++..+...
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 35799999999999999999999853 356666543
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0054 Score=47.63 Aligned_cols=38 Identities=29% Similarity=0.275 Sum_probs=33.6
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
..+++|+|+|+|. |-+|+++++.|.+.|++|++.+++.
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~ 61 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE 61 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3467899999998 7999999999999999999888764
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.038 Score=45.87 Aligned_cols=79 Identities=19% Similarity=0.192 Sum_probs=48.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
|||.|.|+ |++|..++..|+..|+ +|++++..........+..... .. .....+.+.-..++.. +.++|+||-++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~-~~-~~~~~~~i~~t~d~~~-~~~aDiVIita 77 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEA-SP-VGGFDTKVTGTNNYAD-TANSDIVVITA 77 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhh-hh-ccCCCcEEEecCCHHH-hCCCCEEEEcC
Confidence 57999997 9999999999999886 8999998544322111111000 00 0001112222233544 68899999999
Q ss_pred CCCC
Q 025065 88 SPVI 91 (258)
Q Consensus 88 ~~~~ 91 (258)
+...
T Consensus 78 g~p~ 81 (305)
T TIGR01763 78 GLPR 81 (305)
T ss_pred CCCC
Confidence 9754
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0039 Score=56.72 Aligned_cols=73 Identities=14% Similarity=0.223 Sum_probs=57.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a 87 (258)
++|+|.|. |-+|+.+++.|.++|+++++++.+++... ...+ .+...+.||.++++.++++ ++++|+||-+.
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~--~~~~-----~g~~v~~GDat~~~~L~~agi~~A~~vv~~~ 472 (601)
T PRK03659 401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVN--LMRK-----YGYKVYYGDATQLELLRAAGAEKAEAIVITC 472 (601)
T ss_pred CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHH--HHHh-----CCCeEEEeeCCCHHHHHhcCCccCCEEEEEe
Confidence 57999996 99999999999999999999998764432 1221 3678999999999988865 46789888554
Q ss_pred CC
Q 025065 88 SP 89 (258)
Q Consensus 88 ~~ 89 (258)
..
T Consensus 473 ~d 474 (601)
T PRK03659 473 NE 474 (601)
T ss_pred CC
Confidence 44
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0064 Score=52.48 Aligned_cols=68 Identities=22% Similarity=0.199 Sum_probs=49.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+++|+|+|. |.||+.+++.|...|.+|+++++++.+...... .+++. . .+.++++++|+||.
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-------~G~~v-----~---~l~eal~~aDVVI~ 273 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-------DGFRV-----M---TMEEAAELGDIFVT 273 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-------cCCEe-----c---CHHHHHhCCCEEEE
Confidence 36789999997 999999999999999999999887644311100 12221 1 24566788999998
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+++.
T Consensus 274 aTG~ 277 (425)
T PRK05476 274 ATGN 277 (425)
T ss_pred CCCC
Confidence 7754
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0035 Score=59.34 Aligned_cols=123 Identities=20% Similarity=0.239 Sum_probs=81.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCE-EEEEEcCCCCccchh--hccccCcCCcEEEEEccCCCcccHHHHhCC-----
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEH--LRELDGATERLHLFKANLLEEGSFDSAVDG----- 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----- 79 (258)
.|.++|+||.|.-|-+|++.|+.+|.+ ++..+|+--+.-.+. ...+...+-.+..-..|++..+....++..
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence 467999999999999999999999975 455566544332211 222222223344444667766666666653
Q ss_pred -CcEEEecCCCCCCCC---CCch---------------------------------------------hhHHHHHHHHHH
Q 025065 80 -CDGVFHTASPVIFLS---DNPQ---------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 80 -~d~Vih~a~~~~~~~---~~~~---------------------------------------------~~Y~~sK~~~e~ 110 (258)
+--|+|+|+.....- ..+. +.||.+..+.|+
T Consensus 1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~MER 1927 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAMER 1927 (2376)
T ss_pred cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHHHH
Confidence 456888888753311 1111 789999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCcc
Q 025065 111 AAWKFAKENGIDLVAIHPGTV 131 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v 131 (258)
+++.- +..|++-+.+..|.|
T Consensus 1928 iceqR-r~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1928 ICEQR-RHEGFPGTAIQWGAI 1947 (2376)
T ss_pred HHHHh-hhcCCCcceeeeecc
Confidence 98774 445888888887765
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.023 Score=48.87 Aligned_cols=81 Identities=15% Similarity=0.133 Sum_probs=52.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCcc---chhh---------------ccccCcCC--cEEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK---TEHL---------------RELDGATE--RLHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~~---------------~~~~~~~~--~~~~~~~ 65 (258)
+..+|+|.|+ |.+|+++++.|...|. +++++|.+.-... ++.+ +.+...++ +++.+..
T Consensus 37 ~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~ 115 (390)
T PRK07411 37 KAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYET 115 (390)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEec
Confidence 4578999998 8999999999999995 6777775432211 1111 11112233 3455555
Q ss_pred cCCCcccHHHHhCCCcEEEecCCC
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASP 89 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~ 89 (258)
.++. +...+.+.++|+||.+...
T Consensus 116 ~~~~-~~~~~~~~~~D~Vvd~~d~ 138 (390)
T PRK07411 116 RLSS-ENALDILAPYDVVVDGTDN 138 (390)
T ss_pred ccCH-HhHHHHHhCCCEEEECCCC
Confidence 5554 4566778899999988765
|
|
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.026 Score=46.23 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=66.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hh---------------hccccCcCCcEE--EEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EH---------------LRELDGATERLH--LFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~---------------~~~~~~~~~~~~--~~~~ 65 (258)
...+|||.|+ |.+|.++++.|...|. +++++|.+.-.... +. .+.+...++.+. .+..
T Consensus 18 ~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~ 96 (286)
T cd01491 18 QKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTG 96 (286)
T ss_pred hcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4568999998 8999999999999995 68887755322110 10 111222234333 3333
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccC
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~ 134 (258)
++ ..+.+.++|+||.+... ......+.+++++.+++++......++|.
T Consensus 97 ~~-----~~~~l~~fdvVV~~~~~----------------~~~~~~in~~c~~~~ipfI~a~~~G~~G~ 144 (286)
T cd01491 97 PL-----TTDELLKFQVVVLTDAS----------------LEDQLKINEFCHSPGIKFISADTRGLFGS 144 (286)
T ss_pred cC-----CHHHHhcCCEEEEecCC----------------HHHHHHHHHHHHHcCCEEEEEeccccEEE
Confidence 32 23566788999876542 12223345557778999998888777774
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0021 Score=55.88 Aligned_cols=74 Identities=19% Similarity=0.191 Sum_probs=50.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
..+++|+|+|+ |-+|+.+++.|...|. +|++.+|++..... ..... +. +..+.+++.+.+.++|+||
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~-la~~~-----g~-----~~~~~~~~~~~l~~aDvVI 247 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEE-LAEEF-----GG-----EAIPLDELPEALAEADIVI 247 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHH-HHHHc-----CC-----cEeeHHHHHHHhccCCEEE
Confidence 35689999997 9999999999999996 79888887643211 11111 11 1222245666778899999
Q ss_pred ecCCCCC
Q 025065 85 HTASPVI 91 (258)
Q Consensus 85 h~a~~~~ 91 (258)
.+.+...
T Consensus 248 ~aT~s~~ 254 (423)
T PRK00045 248 SSTGAPH 254 (423)
T ss_pred ECCCCCC
Confidence 9887643
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.026 Score=52.06 Aligned_cols=101 Identities=18% Similarity=0.218 Sum_probs=66.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccc-hhh----------------ccccCcCC--cEEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKT-EHL----------------RELDGATE--RLHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~----------------~~~~~~~~--~~~~~~~ 65 (258)
+..+|+|.|+ | +|++++.+|...|- ++++++.+.-+..- +.. ..+...++ +++.+..
T Consensus 106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~ 183 (722)
T PRK07877 106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD 183 (722)
T ss_pred hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4578999999 8 99999999999983 78887765322110 000 11111123 4566666
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
.++ .+.+.++++++|+|+.|.-. -.+|. ++.+.+.+.+++++.-
T Consensus 184 ~i~-~~n~~~~l~~~DlVvD~~D~------------~~~R~----~ln~~a~~~~iP~i~~ 227 (722)
T PRK07877 184 GLT-EDNVDAFLDGLDVVVEECDS------------LDVKV----LLREAARARRIPVLMA 227 (722)
T ss_pred cCC-HHHHHHHhcCCCEEEECCCC------------HHHHH----HHHHHHHHcCCCEEEE
Confidence 666 56788899999999988765 23444 3444577778877643
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0061 Score=50.46 Aligned_cols=35 Identities=23% Similarity=0.228 Sum_probs=28.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~ 42 (258)
|+||.|.||+|+.|.+|++.|.... .++..++.+.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~ 37 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE 37 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence 5789999999999999999999876 4766655433
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0098 Score=48.42 Aligned_cols=58 Identities=22% Similarity=0.170 Sum_probs=46.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+|.|.|.+|.+|+.++..|+++|+.|++... .. .++.+..+++|+||-
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s---~t-------------------------~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHS---RT-------------------------RNLAEVARKADILVV 207 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECC---CC-------------------------CCHHHHHhhCCEEEE
Confidence 57899999999999999999999999999987621 10 135667788899998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
+.|...
T Consensus 208 avg~~~ 213 (284)
T PRK14179 208 AIGRGH 213 (284)
T ss_pred ecCccc
Confidence 777744
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0041 Score=52.46 Aligned_cols=34 Identities=29% Similarity=0.380 Sum_probs=30.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
+|+|.|.|+ |.+|+.++..|.+.|++|++++|++
T Consensus 2 ~mkI~IiG~-G~mG~~~A~~L~~~G~~V~~~~r~~ 35 (341)
T PRK08229 2 MARICVLGA-GSIGCYLGGRLAAAGADVTLIGRAR 35 (341)
T ss_pred CceEEEECC-CHHHHHHHHHHHhcCCcEEEEecHH
Confidence 357999986 9999999999999999999999853
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0067 Score=51.31 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=24.8
Q ss_pred cEEEEECCcchHHHHHHHHHHH-CCCE---EEEEEc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQ-RGYT---VKATVR 40 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~-~g~~---V~~~~r 40 (258)
++|.|.||||++|+.|++.|++ ..++ ++.+..
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss 37 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFST 37 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecc
Confidence 5899999999999999995555 4566 565544
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.014 Score=47.53 Aligned_cols=57 Identities=23% Similarity=0.174 Sum_probs=46.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|.|.++.+|+.|+..|.++|..|++..... .++.+.++++|+||-
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t----------------------------~~l~~~~~~ADIVV~ 207 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT----------------------------RDLAAHTRQADIVVA 207 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC----------------------------CCHHHHhhhCCEEEE
Confidence 4689999999999999999999999999998754321 235667788899998
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
.+|..
T Consensus 208 avG~~ 212 (285)
T PRK14189 208 AVGKR 212 (285)
T ss_pred cCCCc
Confidence 87753
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.015 Score=47.40 Aligned_cols=58 Identities=19% Similarity=0.104 Sum_probs=47.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|+|.+..+|+.|+..|.++|..|++..... .++.+..+++|+||.
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T----------------------------~~l~~~~~~ADIvv~ 213 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT----------------------------DDLKKYTLDADILVV 213 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC----------------------------CCHHHHHhhCCEEEE
Confidence 4689999999999999999999999999998765322 135667788999998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
.+|...
T Consensus 214 AvG~p~ 219 (287)
T PRK14176 214 ATGVKH 219 (287)
T ss_pred ccCCcc
Confidence 888754
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0024 Score=53.20 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=49.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.+++|+|.|+ |-+|..+++.|...| .+|++++|++.+... ..... +... .+.+++.+.+.++|+||.
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~-la~~~-----g~~~-----~~~~~~~~~l~~aDvVi~ 244 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEE-LAKEL-----GGNA-----VPLDELLELLNEADVVIS 244 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHc-----CCeE-----EeHHHHHHHHhcCCEEEE
Confidence 5789999998 999999999999876 689999887643211 11111 1122 222356677788999998
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.+.
T Consensus 245 at~~ 248 (311)
T cd05213 245 ATGA 248 (311)
T ss_pred CCCC
Confidence 8876
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0066 Score=49.75 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=30.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC----CEEEEEEcCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG----YTVKATVRDP 42 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g----~~V~~~~r~~ 42 (258)
+.|+|.++| +|-+|+.+++.|++.| ++|++.+|++
T Consensus 2 ~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~ 40 (279)
T PRK07679 2 SIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSN 40 (279)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCC
Confidence 456899999 5999999999999987 7888888764
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.01 Score=49.80 Aligned_cols=65 Identities=20% Similarity=0.209 Sum_probs=48.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+++|.|.|. |.||+.+++.|...|++|++.++++.... .. +.-..++.++++++|+|+-
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~--------------~~----~~~~~~l~ell~~aDiVil 204 (330)
T PRK12480 144 VKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDL--------------DF----LTYKDSVKEAIKDADIISL 204 (330)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhh--------------hh----hhccCCHHHHHhcCCEEEE
Confidence 46789999996 99999999999999999999998653210 00 0112357888999998885
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 205 ~lP~ 208 (330)
T PRK12480 205 HVPA 208 (330)
T ss_pred eCCC
Confidence 5544
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0078 Score=50.20 Aligned_cols=37 Identities=35% Similarity=0.399 Sum_probs=32.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
.+.+++|+|++|.+|..+++.+...|.+|+++++++.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~ 198 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPE 198 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 3568999999999999999999999999998887653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0091 Score=50.20 Aligned_cols=67 Identities=13% Similarity=0.044 Sum_probs=49.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|. |-||+.+++.|...|.+|++.+|...... ... .++ ...++.++++++|+|+.
T Consensus 148 L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~~~-----~~~--------~~~~l~ell~~aDiV~l 210 (333)
T PRK13243 148 VYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEA---EKE-----LGA--------EYRPLEELLRESDFVSL 210 (333)
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhh---HHH-----cCC--------EecCHHHHHhhCCEEEE
Confidence 46899999997 99999999999999999999988643211 000 011 12357788899999887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.-.
T Consensus 211 ~lP~ 214 (333)
T PRK13243 211 HVPL 214 (333)
T ss_pred eCCC
Confidence 7654
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.021 Score=50.14 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=52.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+++|+|+|+ |-.|..+++.|.++|++|.+.+..........++. ...++.++.+...+ ..+.++|.||.
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~---~~~gi~~~~g~~~~-----~~~~~~d~vv~ 73 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGK---MFDGLVFYTGRLKD-----ALDNGFDILAL 73 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhh---ccCCcEEEeCCCCH-----HHHhCCCEEEE
Confidence 35789999998 68999999999999999999987654421222221 11356665554221 23467899999
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
..|+..
T Consensus 74 spgi~~ 79 (445)
T PRK04308 74 SPGISE 79 (445)
T ss_pred CCCCCC
Confidence 888853
|
|
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0094 Score=50.57 Aligned_cols=65 Identities=22% Similarity=0.329 Sum_probs=50.2
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+|+|.|+ |.+|..+++++.+.|++|++++.++..+.. .+ .-.++.+|..|.+.+.++.+.+|+|.
T Consensus 1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~-~~--------ad~~~~~~~~d~~~i~~~a~~~dvit 65 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAV-QV--------ADHVVLAPFFDPAAIRELAESCDVIT 65 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChh-Hh--------CceeEeCCCCCHHHHHHHHhhCCEEE
Confidence 4889998 899999999999999999999876543311 00 11345788999999999888888764
|
Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. |
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.01 Score=49.10 Aligned_cols=74 Identities=24% Similarity=0.294 Sum_probs=51.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEE-----ccCCCcccHHHHhCCCcE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFK-----ANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~~~~~~~~~~~~~d~ 82 (258)
+++|.|.|+ |-=|.+|+..|.++||+|+.-.|+++.... +...+.+.++.. .++.-..++.++++++|+
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~-----i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~ 74 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAE-----INETRENPKYLPGILLPPNLKATTDLAEALDGADI 74 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHH-----HHhcCcCccccCCccCCcccccccCHHHHHhcCCE
Confidence 368999998 888999999999999999999997643321 111122333333 233344678888889998
Q ss_pred EEecC
Q 025065 83 VFHTA 87 (258)
Q Consensus 83 Vih~a 87 (258)
|+-..
T Consensus 75 iv~av 79 (329)
T COG0240 75 IVIAV 79 (329)
T ss_pred EEEEC
Confidence 88443
|
|
| >KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0072 Score=51.87 Aligned_cols=37 Identities=24% Similarity=0.285 Sum_probs=31.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~ 44 (258)
.+.||||.|| |.||.+|.+-|+-.|+ +|++++.+.-+
T Consensus 11 ~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTID 48 (603)
T KOG2013|consen 11 KSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTID 48 (603)
T ss_pred ccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEecccee
Confidence 3568999998 8999999999999996 78888876543
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.014 Score=43.24 Aligned_cols=70 Identities=21% Similarity=0.220 Sum_probs=45.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+|+++|+|- |.+|+.++++|...|.+|+++..+|-.. ++.. -.+++.. .+.+++..+|++|-
T Consensus 21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a----lqA~---~dGf~v~--------~~~~a~~~adi~vt 84 (162)
T PF00670_consen 21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA----LQAA---MDGFEVM--------TLEEALRDADIFVT 84 (162)
T ss_dssp -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH----HHHH---HTT-EEE---------HHHHTTT-SEEEE
T ss_pred eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH----HHhh---hcCcEec--------CHHHHHhhCCEEEE
Confidence 35789999996 9999999999999999999998766332 1111 1234432 36678888999998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
+.|..+
T Consensus 85 aTG~~~ 90 (162)
T PF00670_consen 85 ATGNKD 90 (162)
T ss_dssp -SSSSS
T ss_pred CCCCcc
Confidence 887644
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.016 Score=48.10 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=27.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRD 41 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~ 41 (258)
+.+|.|.||||++|.+|++.|.++.+ ++..+..+
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~ 36 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEA 36 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence 46899999999999999999988764 66665543
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0072 Score=52.02 Aligned_cols=36 Identities=31% Similarity=0.215 Sum_probs=33.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
+|+|||||++..+|..+++.|.+.|++|++++..+.
T Consensus 4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 689999999999999999999999999999987653
|
|
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.029 Score=42.88 Aligned_cols=80 Identities=18% Similarity=0.086 Sum_probs=52.9
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC-cccHHHHhCCCcEE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAVDGCDGV 83 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~V 83 (258)
.+.+|+++|.|.+.-+|+-|+..|.++|..|+..+.+...... . ............+ ...+.+.++++|+|
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~----~----~~~~~hs~t~~~~~~~~l~~~~~~ADIV 130 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFT----R----GESIRHEKHHVTDEEAMTLDCLSQSDVV 130 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccc----c----ccccccccccccchhhHHHHHhhhCCEE
Confidence 3678999999999999999999999999999987543311100 0 0000111111112 12367788899999
Q ss_pred EecCCCCCC
Q 025065 84 FHTASPVIF 92 (258)
Q Consensus 84 ih~a~~~~~ 92 (258)
|-.+|....
T Consensus 131 IsAvG~~~~ 139 (197)
T cd01079 131 ITGVPSPNY 139 (197)
T ss_pred EEccCCCCC
Confidence 988887554
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.12 Score=42.95 Aligned_cols=112 Identities=14% Similarity=0.135 Sum_probs=62.1
Q ss_pred EEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchh--hccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 11 VCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEH--LRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
|.|.|+ |.+|+.++..|+..| .++++++++.+...... +.............. . .+ .+.+.++|+||.+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~---~--~~-~~~l~~aDiVIit 73 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR---G--GD-YADAADADIVVIT 73 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE---C--CC-HHHhCCCCEEEEc
Confidence 468897 889999999999988 78999998765433211 111111001111111 1 12 3478899999999
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 87 ASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 87 a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
++................-....+++... ++++.+..++-.++
T Consensus 74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i-~~~~p~~~viv~sN 116 (300)
T cd00300 74 AGAPRKPGETRLDLINRNAPILRSVITNL-KKYGPDAIILVVSN 116 (300)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHhCCCeEEEEccC
Confidence 99854322222222223333333343332 33456666665553
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.017 Score=48.84 Aligned_cols=80 Identities=19% Similarity=0.051 Sum_probs=52.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..++++.|.|- |-||+.+++.|..-|.+|++.+|+..+.....+. .+ ...+.-.........++.+++.++|+|+.
T Consensus 157 l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~L~ell~~aDiVvl 232 (347)
T PLN02928 157 LFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLL-IP--NGDVDDLVDEKGGHEDIYEFAGEADIVVL 232 (347)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhc-cc--cccccccccccCcccCHHHHHhhCCEEEE
Confidence 46799999997 9999999999999999999998864321110000 00 00000011111145678899999999997
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 233 ~lPl 236 (347)
T PLN02928 233 CCTL 236 (347)
T ss_pred CCCC
Confidence 7665
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.015 Score=41.12 Aligned_cols=30 Identities=33% Similarity=0.588 Sum_probs=26.4
Q ss_pred EEEEECCcchHHHHHHHHHHHC-CCEEEEEE
Q 025065 10 VVCVTGASGFVASWLVKLLLQR-GYTVKATV 39 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~ 39 (258)
|+.|+|++|.+|+.+++.|.+. ++++.++.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~ 31 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALA 31 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEE
Confidence 4889999999999999999984 78888873
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.012 Score=49.59 Aligned_cols=38 Identities=24% Similarity=0.278 Sum_probs=32.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.+.+|||+||+|.+|..+++.+...|.+|++++++..+
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~ 188 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEK 188 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 46799999999999999999998999999988876533
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0072 Score=49.60 Aligned_cols=77 Identities=17% Similarity=0.094 Sum_probs=49.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
++++++|.|+ |..|+.++.+|.+.|. +|++++|+.++... +.+.- ........ +...+++...+.++|+|||
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~--La~~~--~~~~~~~~--~~~~~~~~~~~~~~DiVIn 196 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSR--LVDLG--VQVGVITR--LEGDSGGLAIEKAAEVLVS 196 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH--HHHHh--hhcCccee--ccchhhhhhcccCCCEEEE
Confidence 5689999997 9999999999999995 79999998654322 21100 00001111 1111234455577999999
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+....
T Consensus 197 aTp~g 201 (282)
T TIGR01809 197 TVPAD 201 (282)
T ss_pred CCCCC
Confidence 98763
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0018 Score=53.33 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=32.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
++|.|.|+ |.+|..++..|.++|++|++.+++++..
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~ 37 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQL 37 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence 57999998 9999999999999999999999876543
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.1 Score=44.68 Aligned_cols=116 Identities=9% Similarity=0.060 Sum_probs=60.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-E----EE--EE--EcCCCCccchhhccccCc---CCcEEEEEccCCCcccHHH
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-T----VK--AT--VRDPNSPKTEHLRELDGA---TERLHLFKANLLEEGSFDS 75 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~----V~--~~--~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~ 75 (258)
.-||.|+|++|.+|++++..|...+. . |. .+ +++.+......++-.... ..++.... . -.+
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~------~-~y~ 116 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI------D-PYE 116 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec------C-CHH
Confidence 45899999999999999999998762 2 33 33 444333222222111100 01111111 1 235
Q ss_pred HhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 76 AVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 76 ~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
.++++|+||-+||.....................+......+-.+.+..++=.++
T Consensus 117 ~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 117 VFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 6889999999999854322222222333333333444443332335555554443
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0054 Score=53.17 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=33.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
++|+|.|.|. |++|..++..|.++||+|+++++++..
T Consensus 2 ~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~ 38 (415)
T PRK11064 2 SFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHA 38 (415)
T ss_pred CccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHH
Confidence 4578999986 999999999999999999999987654
|
|
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.01 Score=47.50 Aligned_cols=69 Identities=16% Similarity=0.221 Sum_probs=41.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC---E-EEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY---T-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~---~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
++||.|.|+ |.+|+.++..|.+.|. + +++.+|+.... .+.+... .++.. ..+..++++++|+|
T Consensus 4 ~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~-~~~~~~~----~~~~~-------~~~~~~~~~~~DiV 70 (245)
T PRK07634 4 KHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEK-LDQLQAR----YNVST-------TTDWKQHVTSVDTI 70 (245)
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCHHH-HHHHHHH----cCcEE-------eCChHHHHhcCCEE
Confidence 478999995 9999999999998863 2 55666542211 1111110 01211 12355667789999
Q ss_pred EecCCC
Q 025065 84 FHTASP 89 (258)
Q Consensus 84 ih~a~~ 89 (258)
+.+.-.
T Consensus 71 iiavp~ 76 (245)
T PRK07634 71 VLAMPP 76 (245)
T ss_pred EEecCH
Confidence 876544
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0081 Score=49.24 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=30.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
|+|.|.| .|.+|+.++..|.+.|++|++.++++.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~ 34 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRES 34 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3699998 599999999999999999999998653
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.02 Score=46.70 Aligned_cols=58 Identities=22% Similarity=0.172 Sum_probs=46.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|.|.+..+|+.|+..|++++..|+...... .++.+..+++|+||-
T Consensus 153 l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T----------------------------~~l~~~~~~ADIvIs 204 (287)
T PRK14173 153 LAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKT----------------------------QDLPAVTRRADVLVV 204 (287)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEEE
Confidence 4689999999999999999999999999998664332 125667778899998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
++|...
T Consensus 205 AvGkp~ 210 (287)
T PRK14173 205 AVGRPH 210 (287)
T ss_pred ecCCcC
Confidence 887754
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0047 Score=51.35 Aligned_cols=70 Identities=24% Similarity=0.265 Sum_probs=46.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
..++|.|+| .|.+|..++..|.+.|+ +|++++|++.... ..... ++.. .. ..+..+.+.++|+||
T Consensus 5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~--~a~~~-----g~~~---~~--~~~~~~~~~~aDvVi 71 (307)
T PRK07502 5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRA--RAREL-----GLGD---RV--TTSAAEAVKGADLVI 71 (307)
T ss_pred CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHH--HHHhC-----CCCc---ee--cCCHHHHhcCCCEEE
Confidence 346899998 59999999999999884 8999988754321 11111 1100 01 123455677899999
Q ss_pred ecCCC
Q 025065 85 HTASP 89 (258)
Q Consensus 85 h~a~~ 89 (258)
.++..
T Consensus 72 iavp~ 76 (307)
T PRK07502 72 LCVPV 76 (307)
T ss_pred ECCCH
Confidence 88754
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.021 Score=46.42 Aligned_cols=59 Identities=25% Similarity=0.208 Sum_probs=47.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+++|.|.+..+|+.|+..|.++|..|+...... .++.+..+++|+||-
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T----------------------------~dl~~~~k~ADIvIs 207 (282)
T PRK14180 156 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT----------------------------TDLKSHTTKADILIV 207 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCC----------------------------CCHHHHhhhcCEEEE
Confidence 4689999999999999999999999999998765432 135556778899998
Q ss_pred cCCCCCC
Q 025065 86 TASPVIF 92 (258)
Q Consensus 86 ~a~~~~~ 92 (258)
.+|....
T Consensus 208 AvGkp~~ 214 (282)
T PRK14180 208 AVGKPNF 214 (282)
T ss_pred ccCCcCc
Confidence 8887543
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.021 Score=46.55 Aligned_cols=58 Identities=22% Similarity=0.121 Sum_probs=45.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|+|.|.+..+|+.++..|+++|..|++..... .++.+.++++|+||-
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t----------------------------~~l~~~~~~ADIvV~ 206 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT----------------------------KDLSFYTQNADIVCV 206 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc----------------------------HHHHHHHHhCCEEEE
Confidence 4689999999999999999999999999998763221 124567778888887
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
++|...
T Consensus 207 AvG~p~ 212 (285)
T PRK14191 207 GVGKPD 212 (285)
T ss_pred ecCCCC
Confidence 777644
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.017 Score=48.74 Aligned_cols=33 Identities=33% Similarity=0.481 Sum_probs=27.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRD 41 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~ 41 (258)
+||.|+|++|++|++|++.|.+.+ .++..+..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence 479999999999999999998876 588877443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.022 Score=46.26 Aligned_cols=59 Identities=24% Similarity=0.212 Sum_probs=47.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+++|.|.+..+|+.|+..|.++|..|+....+. .++.+..+++|+||-
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T----------------------------~~l~~~~~~ADIvIs 207 (278)
T PRK14172 156 IEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKT----------------------------KNLKEVCKKADILVV 207 (278)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEEE
Confidence 5789999999999999999999999999888764322 135667778899998
Q ss_pred cCCCCCC
Q 025065 86 TASPVIF 92 (258)
Q Consensus 86 ~a~~~~~ 92 (258)
.+|..+.
T Consensus 208 AvGkp~~ 214 (278)
T PRK14172 208 AIGRPKF 214 (278)
T ss_pred cCCCcCc
Confidence 8887543
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.023 Score=46.29 Aligned_cols=58 Identities=19% Similarity=0.103 Sum_probs=46.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+++|.|.+..+|+.|+..|+++|..|+....+. .++.+..+++|+||-
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T----------------------------~~l~~~~~~ADIvIs 208 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKT----------------------------QNLPSIVRQADIIVG 208 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEEE
Confidence 5789999999999999999999999999888765322 135667788899997
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
++|...
T Consensus 209 AvGk~~ 214 (284)
T PRK14177 209 AVGKPE 214 (284)
T ss_pred eCCCcC
Confidence 777754
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.028 Score=45.10 Aligned_cols=99 Identities=14% Similarity=0.151 Sum_probs=68.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 85 (258)
+++|||.|||+ =|+.|++.|.+.|++|++..-....... ......+.+-+.+.+.+.+.++ ++++||+
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~~---------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VID 71 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGPA---------DLPGPVRVGGFGGAEGLAAYLREEGIDLVID 71 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCcc---------cCCceEEECCCCCHHHHHHHHHHCCCCEEEE
Confidence 45799999976 6999999999999988876544422210 1356778888878889999986 6999996
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEE-EEcCCc
Q 025065 86 TASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLV-AIHPGT 130 (258)
Q Consensus 86 ~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~-ilRp~~ 130 (258)
..=. |+.. .. +.+.+.+++.++++. ..||.+
T Consensus 72 ATHP-----------fA~~--is-~~a~~ac~~~~ipyiR~eR~~~ 103 (248)
T PRK08057 72 ATHP-----------YAAQ--IS-ANAAAACRALGIPYLRLERPSW 103 (248)
T ss_pred CCCc-----------cHHH--HH-HHHHHHHHHhCCcEEEEeCCCc
Confidence 5422 3221 11 222334677789887 567765
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.012 Score=50.24 Aligned_cols=69 Identities=26% Similarity=0.195 Sum_probs=50.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+|.|.|. |-||+.+++.|..-|.+|++.+|...+... ... .++.-..+++++++.+|+|+.
T Consensus 190 L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~--~~~------------~g~~~~~~l~ell~~aDvV~l 254 (385)
T PRK07574 190 LEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEV--EQE------------LGLTYHVSFDSLVSVCDVVTI 254 (385)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhh--Hhh------------cCceecCCHHHHhhcCCEEEE
Confidence 46789999997 999999999999999999999886532211 000 012223458888999999887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 255 ~lPl 258 (385)
T PRK07574 255 HCPL 258 (385)
T ss_pred cCCC
Confidence 6655
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0087 Score=49.51 Aligned_cols=26 Identities=38% Similarity=0.533 Sum_probs=23.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY 33 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~ 33 (258)
+++|.|.||||.+|+.+++.|.++.+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f 26 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHF 26 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCC
Confidence 36899999999999999999998653
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.096 Score=41.59 Aligned_cols=102 Identities=16% Similarity=0.180 Sum_probs=61.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hh---------------hccccCcCCc--EEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EH---------------LRELDGATER--LHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~---------------~~~~~~~~~~--~~~~~~ 65 (258)
+..+|+|.|. |.+|+++++.|...|. +++++|.+.-...- +. .+.+...++. ++.+..
T Consensus 10 ~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~ 88 (231)
T cd00755 10 RNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE 88 (231)
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence 4578999997 9999999999999995 78887755322110 00 0111112333 333444
Q ss_pred cCCCcccHHHHhC-CCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 66 NLLEEGSFDSAVD-GCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 66 Dl~~~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
.++ ++....++. ++|+||.+... -.+|.. +..++.+.+++++..
T Consensus 89 ~i~-~~~~~~l~~~~~D~VvdaiD~------------~~~k~~----L~~~c~~~~ip~I~s 133 (231)
T cd00755 89 FLT-PDNSEDLLGGDPDFVVDAIDS------------IRAKVA----LIAYCRKRKIPVISS 133 (231)
T ss_pred ecC-HhHHHHHhcCCCCEEEEcCCC------------HHHHHH----HHHHHHHhCCCEEEE
Confidence 444 345556664 59999987655 223333 344566778888664
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.015 Score=51.70 Aligned_cols=76 Identities=24% Similarity=0.267 Sum_probs=51.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+.+++|+|.|+ |-+|+.+++.|...|. +|++++|+...... +... .++.... ....+++.+.+.++|+||
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~--La~~---~~g~~i~---~~~~~dl~~al~~aDVVI 334 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAA--LREE---FPDVEII---YKPLDEMLACAAEADVVF 334 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHH--HHHH---hCCCceE---eecHhhHHHHHhcCCEEE
Confidence 45789999998 9999999999999996 79999987644321 2110 0111111 122234567788999999
Q ss_pred ecCCCC
Q 025065 85 HTASPV 90 (258)
Q Consensus 85 h~a~~~ 90 (258)
.+.+..
T Consensus 335 sAT~s~ 340 (519)
T PLN00203 335 TSTSSE 340 (519)
T ss_pred EccCCC
Confidence 877653
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0055 Score=50.63 Aligned_cols=65 Identities=18% Similarity=0.311 Sum_probs=44.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
++|.|.|. |.+|+.+++.|.+.|++|++.+|++..... +.. .++. -.++..++++++|+||-+..
T Consensus 3 ~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~--~~~-----~g~~-------~~~~~~e~~~~~d~vi~~vp 67 (296)
T PRK11559 3 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAVAE--VIA-----AGAE-------TASTAKAVAEQCDVIITMLP 67 (296)
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHH--HHH-----CCCe-------ecCCHHHHHhcCCEEEEeCC
Confidence 57999985 999999999999999999998887643211 111 0111 11335556677888776654
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.025 Score=46.41 Aligned_cols=58 Identities=22% Similarity=0.113 Sum_probs=46.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+++|.|.+..+|+.|+..|.++|..|+...... .++.+..+++|+||-
T Consensus 156 l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T----------------------------~~l~~~~~~ADIvIs 207 (297)
T PRK14186 156 IAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRT----------------------------QDLASITREADILVA 207 (297)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEEE
Confidence 5789999999999999999999999999998764322 135667788999998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
++|...
T Consensus 208 AvGkp~ 213 (297)
T PRK14186 208 AAGRPN 213 (297)
T ss_pred ccCCcC
Confidence 888744
|
|
| >COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.011 Score=48.17 Aligned_cols=68 Identities=18% Similarity=0.204 Sum_probs=55.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 85 (258)
..||++.|+ |=+|++++-++++.|-+|++++|-...+..+. --..+..|..|.+.+.++++ ++|+||-
T Consensus 12 a~kvmLLGS-GELGKEvaIe~QRLG~eViAVDrY~~APAmqV---------Ahrs~Vi~MlD~~al~avv~rekPd~IVp 81 (394)
T COG0027 12 ATKVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV---------AHRSYVIDMLDGDALRAVVEREKPDYIVP 81 (394)
T ss_pred CeEEEEecC-CccchHHHHHHHhcCCEEEEecCcCCChhhhh---------hhheeeeeccCHHHHHHHHHhhCCCeeee
Confidence 467999985 99999999999999999999999876543211 12456789999999999986 4898875
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.025 Score=45.99 Aligned_cols=59 Identities=24% Similarity=0.198 Sum_probs=47.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|.|.+..+|+.|+..|++++..|+...... .++.+..+++|+||-
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T----------------------------~nl~~~~~~ADIvIs 206 (282)
T PRK14166 155 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------------KDLSLYTRQADLIIV 206 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEEE
Confidence 4789999999999999999999999999998654322 126667788999998
Q ss_pred cCCCCCC
Q 025065 86 TASPVIF 92 (258)
Q Consensus 86 ~a~~~~~ 92 (258)
++|..+.
T Consensus 207 AvGkp~~ 213 (282)
T PRK14166 207 AAGCVNL 213 (282)
T ss_pred cCCCcCc
Confidence 8887543
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0073 Score=55.13 Aligned_cols=74 Identities=20% Similarity=0.305 Sum_probs=57.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~ 86 (258)
.++|+|.|. |-+|+.+++.|.++|+++++++.+++.... ..+ .+...+.||.++++-++++ ++++|.||-+
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~--~~~-----~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIET--LRK-----FGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHH--HHh-----cCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 367999998 999999999999999999999987754321 211 3678999999999988753 4678888855
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
...
T Consensus 472 ~~d 474 (621)
T PRK03562 472 IDD 474 (621)
T ss_pred eCC
Confidence 543
|
|
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.025 Score=46.22 Aligned_cols=58 Identities=17% Similarity=0.082 Sum_probs=47.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+++|.|.+..+|+.|+..|++++..|++..... .++.+..+++|+||-
T Consensus 158 l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T----------------------------~~l~~~~~~ADIvVs 209 (294)
T PRK14187 158 LSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSAT----------------------------RDLADYCSKADILVA 209 (294)
T ss_pred CCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEEE
Confidence 5789999999999999999999999999998765322 125667788999998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
.+|...
T Consensus 210 AvGkp~ 215 (294)
T PRK14187 210 AVGIPN 215 (294)
T ss_pred ccCCcC
Confidence 888754
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0066 Score=50.21 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=31.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
++|.|+|. |.+|..+++.|.+.|++|++.+|+++.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~ 36 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQA 36 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence 47999985 999999999999999999999987654
|
|
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0076 Score=50.48 Aligned_cols=73 Identities=19% Similarity=0.240 Sum_probs=56.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcc-cHHHHhCCCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG-SFDSAVDGCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~d~Vih 85 (258)
+++||+.|+ ||+.+..+..|.+++ -+|++.+|...+.. .+ .. ..+++.+..|+++.+ .+++.++..|.|+-
T Consensus 2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~--~~---~~-~~~~~av~ldv~~~~~~L~~~v~~~D~viS 74 (445)
T KOG0172|consen 2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAE--AL---VK-GINIKAVSLDVADEELALRKEVKPLDLVIS 74 (445)
T ss_pred CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHH--HH---hc-CCCccceEEEccchHHHHHhhhcccceeee
Confidence 568999997 999999999999876 57888777654432 12 11 234888999999998 88899999999986
Q ss_pred cC
Q 025065 86 TA 87 (258)
Q Consensus 86 ~a 87 (258)
+.
T Consensus 75 Ll 76 (445)
T KOG0172|consen 75 LL 76 (445)
T ss_pred ec
Confidence 54
|
|
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.019 Score=49.34 Aligned_cols=70 Identities=14% Similarity=0.093 Sum_probs=53.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~ 86 (258)
+.+++|.|. |-+|+.++++|.++|++|++++.+..+ .. ..++..++.||.++++.++++ +++++.|+-+
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~~---~~------~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~ 309 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGLE---HR------LPDDADLIPGDSSDSAVLKKAGAARARAILAL 309 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchhh---hh------ccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence 457999997 899999999999999999888754211 11 124678999999999888764 4678888844
Q ss_pred C
Q 025065 87 A 87 (258)
Q Consensus 87 a 87 (258)
.
T Consensus 310 t 310 (393)
T PRK10537 310 R 310 (393)
T ss_pred C
Confidence 4
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.06 Score=45.70 Aligned_cols=107 Identities=15% Similarity=0.250 Sum_probs=65.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCcc--------------------chhh-ccccCcCCcEEEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK--------------------TEHL-RELDGATERLHLFK 64 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--------------------~~~~-~~~~~~~~~~~~~~ 64 (258)
+..+|+|.|+ |.+|+.++..|.+.|. ++++++.+.-... .+.+ ..+...+.++..+.
T Consensus 175 ~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~~~~ 253 (393)
T PRK06153 175 EGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIVPHP 253 (393)
T ss_pred hhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEEEEe
Confidence 4678999998 9999999999999995 7777765421110 0000 11111234566666
Q ss_pred ccCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccc
Q 025065 65 ANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVI 132 (258)
Q Consensus 65 ~Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~ 132 (258)
..+ +++.+. .+.++|+||.|.-. ..+|.. +..++.+++++++-+--+...
T Consensus 254 ~~I-~~~n~~-~L~~~DiV~dcvDn------------~~aR~~----ln~~a~~~gIP~Id~G~~l~~ 303 (393)
T PRK06153 254 EYI-DEDNVD-ELDGFTFVFVCVDK------------GSSRKL----IVDYLEALGIPFIDVGMGLEL 303 (393)
T ss_pred ecC-CHHHHH-HhcCCCEEEEcCCC------------HHHHHH----HHHHHHHcCCCEEEeeeccee
Confidence 555 444444 56889999988775 333443 333456668887765544443
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.01 Score=48.51 Aligned_cols=76 Identities=18% Similarity=0.253 Sum_probs=55.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.++++.|+|+.| +|+--++....-|++|++++++..+.. +.+..+ +.+++..-..+++..+++.+-.|.++|+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kke-ea~~~L-----GAd~fv~~~~d~d~~~~~~~~~dg~~~~ 253 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKE-EAIKSL-----GADVFVDSTEDPDIMKAIMKTTDGGIDT 253 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHH-HHHHhc-----CcceeEEecCCHHHHHHHHHhhcCccee
Confidence 578999999988 999888888888999999998764432 333333 4455554444788788877767777777
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
+..
T Consensus 254 v~~ 256 (360)
T KOG0023|consen 254 VSN 256 (360)
T ss_pred eee
Confidence 664
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.029 Score=45.66 Aligned_cols=59 Identities=19% Similarity=0.177 Sum_probs=47.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+++|.|.+..+|+.|+..|.++|..|+....+. .++.+..+++|+||-
T Consensus 154 l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T----------------------------~~l~~~~~~ADIvI~ 205 (282)
T PRK14169 154 VAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKT----------------------------RNLKQLTKEADILVV 205 (282)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCC----------------------------CCHHHHHhhCCEEEE
Confidence 4789999999999999999999999999988654322 125667788899998
Q ss_pred cCCCCCC
Q 025065 86 TASPVIF 92 (258)
Q Consensus 86 ~a~~~~~ 92 (258)
.+|..+.
T Consensus 206 AvG~p~~ 212 (282)
T PRK14169 206 AVGVPHF 212 (282)
T ss_pred ccCCcCc
Confidence 8887543
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.012 Score=48.05 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=33.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSP 45 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~ 45 (258)
.+++++|.|| |..+++++.+|++.| .+|+++.|+.++.
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra 163 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERA 163 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 3688999998 999999999999999 5899999987664
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.018 Score=50.23 Aligned_cols=68 Identities=22% Similarity=0.181 Sum_probs=49.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+++++|+|. |.||+.+++.|...|.+|++..+++........ .++.. ..+.++++++|+|+-
T Consensus 252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-------~G~~~--------~~leell~~ADIVI~ 315 (476)
T PTZ00075 252 IAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAM-------EGYQV--------VTLEDVVETADIFVT 315 (476)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-------cCcee--------ccHHHHHhcCCEEEE
Confidence 46899999997 889999999999999999998876543211000 12222 135677888999998
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.+.
T Consensus 316 atGt 319 (476)
T PTZ00075 316 ATGN 319 (476)
T ss_pred CCCc
Confidence 7664
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.029 Score=45.64 Aligned_cols=59 Identities=22% Similarity=0.198 Sum_probs=47.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+++|.|.+..+|+.|+..|.+++..|+...... .++.+..+++|+||-
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T----------------------------~~l~~~~~~ADIvI~ 206 (284)
T PRK14170 155 IEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT----------------------------KDLPQVAKEADILVV 206 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC----------------------------CCHHHHHhhCCEEEE
Confidence 5789999999999999999999999999988654322 125667788899998
Q ss_pred cCCCCCC
Q 025065 86 TASPVIF 92 (258)
Q Consensus 86 ~a~~~~~ 92 (258)
.+|..+.
T Consensus 207 AvG~~~~ 213 (284)
T PRK14170 207 ATGLAKF 213 (284)
T ss_pred ecCCcCc
Confidence 8887543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 258 | ||||
| 2c29_D | 337 | Structure Of Dihydroflavonol Reductase From Vitis V | 5e-28 | ||
| 2rh8_A | 338 | Structure Of Apo Anthocyanidin Reductase From Vitis | 9e-21 | ||
| 2rh8_A | 338 | Structure Of Apo Anthocyanidin Reductase From Vitis | 2e-13 | ||
| 2p4h_X | 322 | Crystal Structure Of Vestitone Reductase From Alfal | 8e-20 | ||
| 2p4h_X | 322 | Crystal Structure Of Vestitone Reductase From Alfal | 4e-08 | ||
| 1y1p_A | 342 | X-Ray Structure Of Aldehyde Reductase With Nadph Le | 4e-07 | ||
| 1y1p_A | 342 | X-Ray Structure Of Aldehyde Reductase With Nadph Le | 2e-06 | ||
| 1ujm_A | 342 | Crystal Structure Of Aldehyde Reductase 2 From Spor | 1e-06 | ||
| 1ujm_A | 342 | Crystal Structure Of Aldehyde Reductase 2 From Spor | 1e-04 |
| >pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337 | Back alignment and structure |
|
| >pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338 | Back alignment and structure |
|
| >pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338 | Back alignment and structure |
|
| >pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322 | Back alignment and structure |
|
| >pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322 | Back alignment and structure |
|
| >pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342 | Back alignment and structure |
|
| >pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342 | Back alignment and structure |
|
| >pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342 | Back alignment and structure |
|
| >pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 294 bits (754), Expect = e-100
Identities = 101/327 (30%), Positives = 142/327 (43%), Gaps = 73/327 (22%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERL 60
M + + VCVTGASGF+ SWLV LL+RGYTV+ATVRDP + K +HL +L A L
Sbjct: 1 MGSQS--ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHL 58
Query: 61 HLFKANLLEEGSFDS-----------------------------AVDGCDGVFHTA---- 87
L+KA+L +EGSFD ++G G+ +
Sbjct: 59 TLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK 118
Query: 88 -----------------------------SPVIFL--SDNPQEWYSLAKTLAEEAAWKFA 116
S + F Y ++KTLAE+AAWK+A
Sbjct: 119 TVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYA 178
Query: 117 KENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI---FVEIRDVVYAH 173
KEN ID + I P V+GPF + L+ I G+++ FV + D+ AH
Sbjct: 179 KENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAH 238
Query: 174 IRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLL--RSGKLEEKYQPTIKVSQERAK 231
I E PKA GRY+ + D+ K LRE YP K ++ ++ S ++
Sbjct: 239 IYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLT 298
Query: 232 SLGINFT-PWEVGVRGCIESLMEKGFL 257
LG F E G +++ KG L
Sbjct: 299 DLGFEFKYSLEDMFTGAVDTCRAKGLL 325
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 274 bits (704), Expect = 1e-92
Identities = 81/321 (25%), Positives = 120/321 (37%), Gaps = 72/321 (22%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP--NSPKTEHLRELDGATERLHLFKAN 66
VCVTG +GF+ SW++K LL+ GY+V T+R L L GA+E+LH F A+
Sbjct: 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD 61
Query: 67 LLEEGSFDS-----------------------------AVDGCDGVFHTA---------- 87
L SF + VDG G+
Sbjct: 62 LSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFI 121
Query: 88 -----------------------SPVIFL--SDNPQEWYSLAKTLAEEAAWKFAKENGID 122
S V L Y+++KTLAE+A +F ++NGID
Sbjct: 122 YTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGID 181
Query: 123 LVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA--FPYIFVEIRDVVYAHIRALEVP 180
+V + ++G F P L E L L+ G + + V + DV AHI LE
Sbjct: 182 VVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENS 241
Query: 181 KASGRYLLAGSVAQHSDILKFLREHYPTL---LRSGKLEEKYQPTIKVSQERAKSLGINF 237
GRY + + ++ + L YP E K ++ ++ G +F
Sbjct: 242 VPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGFDF 301
Query: 238 T-PWEVGVRGCIESLMEKGFL 257
E I+ EKG+L
Sbjct: 302 KYTIEDMFDDAIQCCKEKGYL 322
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 2e-56
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 94 SDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 153
+ P Y +KTLAE+AAWKFA+EN IDL+ + P + G + + ++LI G
Sbjct: 161 AKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITG 220
Query: 154 DQSFA----------FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLR 203
++ + DV AHI E ASGRY+ + ++ KFL
Sbjct: 221 NEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLS 280
Query: 204 EHYPTL-LRSGKLEEKYQPTIKVSQERAKSLGINFT-PWEVGVRGCIESLMEKGFL 257
+ YP + + + + + +S E+ G +F E +E KG L
Sbjct: 281 KRYPQYKVPTDFGDFPPKSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLL 336
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 3e-51
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLH 61
+K CV G +GFVAS LVKLLLQ+GY V TVRDP++ K HL EL L
Sbjct: 4 QHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQEL-GDLK 62
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQE 99
+F+A+L +E SF++ + GCD VFH A+PV F S++P+
Sbjct: 63 IFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPEN 100
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 1e-52
Identities = 50/237 (21%), Positives = 72/237 (30%), Gaps = 62/237 (26%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + + GASGFV S L+ L RG+ V A VR P K E+ E L + KA++
Sbjct: 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--------EHLKVKKADVS 56
Query: 69 EEGSFDSAVDGCDGVFHTASP-----------------------------VIFLS----- 94
G D V +P + +
Sbjct: 57 SLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSL 116
Query: 95 ------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP-ILN 141
+ P+ K L E KE ID V P + P +
Sbjct: 117 FIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR 176
Query: 142 FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDI 198
G + ++ I G+ + + D A I LE PK G + H
Sbjct: 177 LGKDDMIVDIVGNS-------HISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH 226
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 1e-47
Identities = 51/337 (15%), Positives = 101/337 (29%), Gaps = 100/337 (29%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V GA+G + + + G+ + R + + + L L+ A +L+
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSS--QIQRLAYLE-----PECRVAEMLDH 68
Query: 71 GSFDSAVDGCDGVFHTASPV---------------------------------IFLS--- 94
+ A+ G DGV +A +++
Sbjct: 69 AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAY 128
Query: 95 --------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134
+ + Y L K +E A + A+ G+ +V PG V+G
Sbjct: 129 AMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGE 187
Query: 135 -FFQPILNFGAEVILNLINGDQSFAFPYI--FVEIRDVVYAHIRALEVPKASGRYLLAGS 191
P VI + NG+ + ++ + + ALE + RYLL G
Sbjct: 188 LDIGPTT---GRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGH 244
Query: 192 VAQHSDILKFLREH----------YPTLLRSGKLEEKY------QPTI------------ 223
+ +D+ + + E L P +
Sbjct: 245 NLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQ 304
Query: 224 KVSQERAKS-LG-INFTPWEVGVRGCIESLMEKGFLS 258
+ +A+ LG + T + + I+ + G+ +
Sbjct: 305 FLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFN 341
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 8e-44
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERL 60
+ E +V VTGA+GFVAS +V+ LL+ GY V+ T R + +
Sbjct: 5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFE 64
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQE 99
++L++G++D + G GV H AS V F S+ E
Sbjct: 65 TAVVEDMLKQGAYDEVIKGAAGVAHIASVVSF-SNKYDE 102
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 5e-43
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 14/178 (7%)
Query: 88 SPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENG--IDLVAIHPGTVIGPFFQPILNFG-- 143
+ Y+ +KT AE AAWKF EN L A+ P IG F P G
Sbjct: 163 TLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGST 222
Query: 144 AEVILNLINGDQSFAFPYI----FVEIRDVVYAHIRALEVPKASG-RYLLAGSVAQHSDI 198
+ +++L NG+ S A + +V D+ H+ L +P+ R + +
Sbjct: 223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTV 282
Query: 199 LKFLREHYPTLLRSGKLEEKYQPTIKV----SQERAKSLGI-NFTPWEVGVRGCIESL 251
L R+ YP+ ++ Q K S E KSLG + E ++ + S
Sbjct: 283 LATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSE 340
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 78.7 bits (194), Expect = 3e-17
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
M+ + +K + V GA+G + L+++ G+ V+A V E L+ + T
Sbjct: 1 MAQQ--KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT---- 54
Query: 62 LFKANLL-EEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAA 112
LF+ LL D+ +G F + S E ++ K LA+ A
Sbjct: 55 LFQGPLLNNVPLMDTLFEGAHLAF-----INTTSQAGDE-IAIGKDLADAAK 100
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 3e-16
Identities = 37/240 (15%), Positives = 67/240 (27%), Gaps = 70/240 (29%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL-LE 69
+ + G++G V L+K L Y + A R E + + + ++
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV-----EQVPQYNNVK----AVHFDVDWT 53
Query: 70 EGSFDSAVDGCDGVFHTASP---------------------------VIFLS----DNPQ 98
+ G D + + + I LS P+
Sbjct: 54 PEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE 113
Query: 99 EW----------YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVIL 148
+W Y +AK A+ KE +D I PG + +++ EV
Sbjct: 114 KWIGAGFDALKDYYIAKHFADLYL---TKETNLDYTIIQPGALTEEEATGLIDINDEVS- 169
Query: 149 NLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRY--LLAGSVAQHSDILKFLREHY 206
I DV + + G+ + G A + L H+
Sbjct: 170 -------------ASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALESLLEHHH 216
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 7e-15
Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 7/79 (8%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ + GA+G + +Q GY V VRD L H+ ++L+
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS-----SRLPSEGPR--PAHVVVGDVLQA 58
Query: 71 GSFDSAVDGCDGVFHTASP 89
D V G D V
Sbjct: 59 ADVDKTVAGQDAVIVLLGT 77
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 1e-14
Identities = 28/227 (12%), Positives = 67/227 (29%), Gaps = 64/227 (28%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ + GA+G S +++ RG+ V A VR+ + + +++ + ++ +
Sbjct: 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK--------ITQTHKDINILQKDIFDL 54
Query: 71 GSFDSAVDGCDGVFHTASP--------------------------VIFLS---------- 94
S + + V ++ +
Sbjct: 55 TL--SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDED 112
Query: 95 ---------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF-FQPILNFGA 144
+Y A+ A++ + + I P + P G
Sbjct: 113 GNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGK 172
Query: 145 EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 190
+ +L +G+ F+ + D A + +E P + +AG
Sbjct: 173 DHLLFGSDGNS-------FISMEDYAIAVLDEIERPNHLNEHFTVAG 212
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 1e-13
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 12/113 (10%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATER 59
M+ +K+V V G +G + + LL+ G + V+ R+P + LR GA
Sbjct: 2 MVD----KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQ-GAE-- 54
Query: 60 LHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAA 112
+ + + ++ + A++G F + + S + ++ K LA+ A
Sbjct: 55 --VVQGDQDDQVIMELALNGAYATFIVTNY--WESCSQEQEVKQGKLLADLAR 103
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 2e-13
Identities = 44/217 (20%), Positives = 70/217 (32%), Gaps = 66/217 (30%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V V GA+G VA +L+ L +G+ A VR+ + LRE GA++ + ANL E
Sbjct: 24 VLVVGANGKVARYLLSELKNKGHEPVAMVRNEE--QGPELRER-GASD---IVVANLEE- 76
Query: 71 GSFDSAVDGCDGVFHTASP-------------------------------VIFLS----D 95
F A D V A I +S
Sbjct: 77 -DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTV 135
Query: 96 NPQEW------YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVI-GPFFQPILNFGAEVIL 148
+P + Y +AK LA++ K + +D + PG + +
Sbjct: 136 DPDQGPMNMRHYLVAKRLADDE----LKRSSLDYTIVRPGPLSNEESTGKV--------- 182
Query: 149 NLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR 185
++ S I DV ++ G+
Sbjct: 183 -TVSPHFSEITRSITRH--DVAKVIAELVDQQHTIGK 216
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-12
Identities = 39/284 (13%), Positives = 82/284 (28%), Gaps = 87/284 (30%)
Query: 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69
++ VTG+SG + + LV L ++ D T + ++
Sbjct: 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD----------TGGIKFITLDVSN 50
Query: 70 EGSFDSAVD--GCDGVFHTAS---------P-------------------------VIFL 93
D AV+ D +FH A P V+
Sbjct: 51 RDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIP 110
Query: 94 S-------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134
S P+ + + K AE + ++ G+D+ ++ +I
Sbjct: 111 STIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISY 170
Query: 135 FFQP-------ILNFGAEVILN---LINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 184
+P + + + A P +++ D + A + E +
Sbjct: 171 KAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP--DALKALVDLYEADRDKL 228
Query: 185 R----YLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIK 224
Y + S++ ++E P + E +Y+ +
Sbjct: 229 VLRNGYNVTAYTFTPSELYSKIKERIP------EFEIEYKEDFR 266
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 5e-12
Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 10/111 (9%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
V VTGASG + K L + + K VR + ++ G + +F +
Sbjct: 5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA-----QGKEKIGGEAD---VFIGD 56
Query: 67 LLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAK 117
+ + S + A G D + S V + E +
Sbjct: 57 ITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQ 107
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 8e-12
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 8/80 (10%)
Query: 11 VCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69
V + GA G +A ++ L + R P + + + ++L
Sbjct: 26 VLILGAGGQIARHVINQLADKQTIKQTLFARQP-----AKIHKPYPT--NSQIIMGDVLN 78
Query: 70 EGSFDSAVDGCDGVFHTASP 89
+ A+ G D V+ +
Sbjct: 79 HAALKQAMQGQDIVYANLTG 98
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 61.6 bits (149), Expect = 1e-11
Identities = 32/222 (14%), Positives = 54/222 (24%), Gaps = 63/222 (28%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ V GA+G S +V +RG+ V A VRDP + + GAT
Sbjct: 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP-----QKAADRLGATVAT----LVKEPL 53
Query: 71 GSFDSAVDGCDGVFHTASPVI--------------------------------------- 91
++ +D D V S
Sbjct: 54 VLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPG 113
Query: 92 --------FLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFG 143
F + + ++ + I P G
Sbjct: 114 ADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATSYVAG 173
Query: 144 AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR 185
+ +L +G + ++ A + LE P A
Sbjct: 174 KDTLLVGEDGQS-------HITTGNMALAILDQLEHPTAIRD 208
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 60.8 bits (147), Expect = 2e-11
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 11 VCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69
+ + GA+G +A L LL + R +D ER+ + + +
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK--TRIPPEIIDH--ERVTVIEGSFQN 63
Query: 70 EGSFDSAVDGCDGVFHTASP 89
G + AV + VF A
Sbjct: 64 PGXLEQAVTNAEVVFVGAME 83
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-11
Identities = 27/176 (15%), Positives = 50/176 (28%), Gaps = 60/176 (34%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + VTGA+G + + + L ++ P LD A + +L
Sbjct: 4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSP----------LDPAGPNEECVQCDLA 53
Query: 69 EEGSFDSAVDGCDGVFHTA------SP-------------------------VIFLS--- 94
+ + ++ V GCDG+ H ++F S
Sbjct: 54 DANAVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH 113
Query: 95 ----------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134
P Y ++K E A + + G + + G+
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPE 169
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 3e-10
Identities = 33/231 (14%), Positives = 62/231 (26%), Gaps = 85/231 (36%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL 60
M++ +++ VTGA+G V S + L + V+ + H
Sbjct: 1 MLN-----RLL-VTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEE--------- 45
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASP------------------------------- 89
+ +L + + V CDG+ H
Sbjct: 46 -IVACDLADAQAVHDLVKDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPR 104
Query: 90 VIFLS-------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130
++F S P Y L+K E+ A + + I+ + I G+
Sbjct: 105 IVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGS 164
Query: 131 VIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181
+ ++ + D + RA PK
Sbjct: 165 CFPK-------------------PKDARMMATWLSVDDFMRLMKRAFVAPK 196
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 5e-10
Identities = 40/249 (16%), Positives = 62/249 (24%), Gaps = 92/249 (36%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGA 56
M + + +TG +GF+ L + L+ G V T E
Sbjct: 1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVL 60
Query: 57 TERLHLFKANLLEEGSFDSAVDGCDGVFHTASP--------------------------- 89
LEE + V+H AS
Sbjct: 61 E----------LEER----DLSDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALC 106
Query: 90 -------VIFLS------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLV 124
V+ S +P+ Y+ +K E A + + V
Sbjct: 107 TSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEV 166
Query: 125 AI-----------HPGTVIGPFFQPILNFGAEVILNLINGD--QSFAFPYIFVEIRDVVY 171
I P ++ +L E+ + GD Q F Y I DVV
Sbjct: 167 GIVRFFNVYGPGERPDALVPRLCANLLT-RNELP---VEGDGEQRRDFTY----ITDVVD 218
Query: 172 AHIRALEVP 180
+ P
Sbjct: 219 KLVALANRP 227
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 6e-10
Identities = 38/241 (15%), Positives = 72/241 (29%), Gaps = 43/241 (17%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
M G + + + G +G++ + +VK L+ G+ R PNS KT L E +
Sbjct: 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTR-PNSSKTTLLDEF--QSLGAI 61
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTAS------------------------PVIFLSDNP 97
+ K L E + D V + P F +
Sbjct: 62 IVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEED 121
Query: 98 QE---WYSLAKTLAEEAAWKFAKENGIDLVAIHPG----TVIGPFFQPILNFGAEVILNL 150
+ A + + +E I + I +P +
Sbjct: 122 RINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYG- 180
Query: 151 INGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR---YLLAGSVAQHSDILKFLREHYP 207
G+ FA Y +D+ I+ P+A R Y + ++ +++ +
Sbjct: 181 -TGEAKFAMNY----EQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIG 235
Query: 208 T 208
Sbjct: 236 K 236
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 7e-10
Identities = 35/237 (14%), Positives = 75/237 (31%), Gaps = 80/237 (33%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ ++V+ + G T + K + E + L +L+
Sbjct: 5 IAVTGGTGFLGQYVVESIKNDGNTPII-LTRSIGNKAINDYEYRVSDYTL----EDLIN- 58
Query: 71 GSFDSAVDGCDGVFHTA-------------------------------SPVIFLS----- 94
++ D V H A S +++ S
Sbjct: 59 -----QLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAY 113
Query: 95 -------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP------- 134
P Y ++K E ++++ G+ + + + G
Sbjct: 114 SDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYM 173
Query: 135 ---FFQPILNFGAEVILNLINGD--QSFAFPYIFVEIRDVVYAHIRALEVPKASGRY 186
FF+ + G ++ ++ + F ++ + D + I AL+ K SG +
Sbjct: 174 INRFFRQAFH-GEQLT---LHANSVAKREF--LYAK--DAAKSVIYALKQEKVSGTF 222
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 56.7 bits (136), Expect = 1e-09
Identities = 12/98 (12%), Positives = 26/98 (26%), Gaps = 13/98 (13%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGY-----TVKATVRDPNSPKTEHLRELDGATERLHLF 63
V + G +G + + L ++L V R E ++
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHED--------NPINYV 53
Query: 64 KANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWY 101
+ ++ + + + V H QE
Sbjct: 54 QCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENC 91
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 3e-09
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 10/98 (10%)
Query: 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFK 64
E + +TGA GF+AS + + L G+ V D EH+ E E
Sbjct: 26 PSENLKISITGAGGFIASHIARRLKHEGHYV--IASDWKKN--EHMTEDMFCDE---FHL 78
Query: 65 ANLLEEGSFDSAVDGCDGVFHTA---SPVIFLSDNPQE 99
+L + +G D VF+ A + F+ N
Sbjct: 79 VDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSV 116
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 5e-09
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVK-----ATVRDPNSPKTEHLRELDGATERLH 61
+ KV +TG +GF+ S L++ LL+ V AT N + L
Sbjct: 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQW-SNFK 84
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTA 87
+ ++ ++A G D V H A
Sbjct: 85 FIQGDIRNLDDCNNACAGVDYVLHQA 110
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 1e-08
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVK-----ATVRDPNSPKTEHLRELDGATERLH 61
K +TG +GF+ S L++ LL+ V +T N + + L + R
Sbjct: 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQW-SRFC 82
Query: 62 LFKANLLEEGSFDSAVDGCDGVFHTA 87
+ ++ + + + + G D V H A
Sbjct: 83 FIEGDIRDLTTCEQVMKGVDHVLHQA 108
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 1e-08
Identities = 47/233 (20%), Positives = 78/233 (33%), Gaps = 70/233 (30%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ S LV L++ GY V V D S + ++ L +L +
Sbjct: 3 IVVTGGAGFIGSHLVDKLVELGYEV--VVVDNLS--SGRREFVN---PSAELHVRDLKDY 55
Query: 71 GSFDSAVDGCDGVFHTASP-----------------------------------VIFLS- 94
D VFH A+ V+F S
Sbjct: 56 SWGAGI--KGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113
Query: 95 --------------DNPQE---WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 137
+ P + Y AK E +A+ G+ +A+ V+GP +
Sbjct: 114 STVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLR 173
Query: 138 P--ILNFGAEVILN----LINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 184
I +F ++ N + GD + Y++V D V A + A + +
Sbjct: 174 HGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVR--DAVEATLAAWKKFEEMD 224
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 2e-08
Identities = 34/244 (13%), Positives = 64/244 (26%), Gaps = 61/244 (25%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATE 58
M + K V + GASG L+K +L++G V R + + A +
Sbjct: 16 MQN-----KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-------EEAYK 63
Query: 59 RLHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKE 118
++ + + + SA G D F + + + + ++A + AK
Sbjct: 64 NVNQEVVDFEKLDDYASAFQGHDVGFCCLG-TTRGKAGAEGFVRVDRDYVLKSA-ELAKA 121
Query: 119 NGI------------------------------------DLVAIHPGTVIGPFFQPILNF 142
G PG ++ +
Sbjct: 122 GGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGE 181
Query: 143 G-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKF 201
+ V + VV A + + P+ LL I
Sbjct: 182 WLVRKFFGSLPD---SWASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN-----KAIHDL 233
Query: 202 LREH 205
+ H
Sbjct: 234 GKAH 237
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 5e-08
Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 38/217 (17%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL 60
M S + + GA+G++ + K L G+ VR+ + +L + +
Sbjct: 1 MGS----RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKAS 56
Query: 61 --HLFKANLLEEGSFDSAVDGCDGVFHTASPV--------------------IFLS---- 94
++ ++ + S AV D V T + F S
Sbjct: 57 GANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN 116
Query: 95 --DNPQEWYSLAKTLAE-EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILN-- 149
DN + + GI + G F + + G
Sbjct: 117 DVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDK 176
Query: 150 -LINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR 185
+I GD + +FV+ D+ I+A++ P+ +
Sbjct: 177 VVILGDGNARV--VFVKEEDIGTFTIKAVDDPRTLNK 211
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 6e-08
Identities = 34/215 (15%), Positives = 60/215 (27%), Gaps = 73/215 (33%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ +TGA GFV L L H+ E+ +E
Sbjct: 3 IVITGAKGFVGKNLKADLTSTTD--------------HHIFEVH-----------RQTKE 37
Query: 71 GSFDSAVDGCDGVFHTA------SPVIFLSDN---------------------------- 96
+SA+ D + H A F N
Sbjct: 38 EELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQA 97
Query: 97 -PQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP-----ILNFGAEVI--- 147
Y +K E+ ++A+E G + + G + +P I F ++
Sbjct: 98 TQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNE 157
Query: 148 -LNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181
+ + + + Y + D+V RA+E
Sbjct: 158 EIQVNDRNVELTLNY----VDDIVAEIKRAIEGTP 188
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 6e-08
Identities = 53/321 (16%), Positives = 95/321 (29%), Gaps = 80/321 (24%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
E +++ VTG +GF+ S +VK L +G T V D N L ++ K +
Sbjct: 45 EGRMIIVTGGAGFIGSNIVKALNDKGIT-DILVVD-NLKDGTKFVNLVDLNIADYMDKED 102
Query: 67 LLEEGSFDSAVDGCDGVFHTA--------------------------------SPVIFLS 94
L + + +FH P ++ S
Sbjct: 103 FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYAS 162
Query: 95 ------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI---------- 126
+ P + +K L +E + E +V
Sbjct: 163 SAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPRE 222
Query: 127 -HPGT---VIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 182
H G+ V + N + L G ++F +++V DV ++ LE
Sbjct: 223 GHKGSMASVAFHLNTQLNNGES---PKLFEGSENFKRDFVYVG--DVADVNLWFLENGV- 276
Query: 183 SGRYLLAGSVAQ-HSDILKFLREHYPTLL-----RSGKLEEKYQPTIKVSQERAKSLG-- 234
SG + L A+ + ++ KL+ +YQ + ++ G
Sbjct: 277 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYD 336
Query: 235 INFTPWEVGVRGCIESLMEKG 255
F GV + L
Sbjct: 337 KPFKTVAEGVTEYMAWLNRDA 357
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 7e-08
Identities = 40/240 (16%), Positives = 71/240 (29%), Gaps = 76/240 (31%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
++ VTG +GF+ S +V L + + V D S + + ++ E L KA+L
Sbjct: 2 SLIVVTGGAGFIGSHVVDKLSE-SNEI--VVIDNLS--SGNEEFVN---EAARLVKADLA 53
Query: 69 EEGSFDSAVDGCDGVFHTA----------SP-------------------------VIFL 93
+ + G + V+H A +P ++F
Sbjct: 54 AD-DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFT 112
Query: 94 S------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP- 134
S +P Y +K E + + VIG
Sbjct: 113 STSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRR 172
Query: 135 --------FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRY 186
F + E+ I G+ YI++ D V A + L + +
Sbjct: 173 STHGVIYDFIMKLKRNPEELE---ILGNGEQNKSYIYIS--DCVDAMLFGLRGDERVNIF 227
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 7e-08
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Query: 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLF 63
G + K V + G +GF+ L K +L+ D + + L + ER+H F
Sbjct: 20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWE-VFGMDMQTDRLGDLVKH----ERMHFF 74
Query: 64 KANL-LEEGSFDSAVDGCDGVFHTASPV 90
+ ++ + + + V CD + +
Sbjct: 75 EGDITINKEWVEYHVKKCDVILPLVAIA 102
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 1e-07
Identities = 44/270 (16%), Positives = 73/270 (27%), Gaps = 89/270 (32%)
Query: 11 VCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANL-L 68
V + G +GF+ + L + LL+ Y V D S H + ++ +
Sbjct: 3 VLILGVNGFIGNHLTERLLREDHYEV--YGLDIGSDAISRFLN----HPHFHFVEGDISI 56
Query: 69 EEGSFDSAVDGCDGVFHTASP----------------------------------VIFLS 94
+ V CD V + +IF S
Sbjct: 57 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116
Query: 95 ---------DNPQ---EW-------------YSLAKTLAEEAAWKFAKENGIDLVAIHPG 129
D YS++K L + W + ++ G+ P
Sbjct: 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 176
Query: 130 TVIGPFFQPILNFGAE---VILNLI-------------NGDQSFAFPYIFVEIRDVVYAH 173
+GP + I LI G Q F IRD + A
Sbjct: 177 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD----IRDGIEAL 232
Query: 174 IRALEVP--KASGRYLLAGSVAQHSDILKF 201
R +E + G + G+ + I +
Sbjct: 233 YRIIENAGNRCDGEIINIGNPENEASIEEL 262
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 3e-07
Identities = 53/317 (16%), Positives = 93/317 (29%), Gaps = 80/317 (25%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ VTG +GF+ S +VK L +G T V D N L ++ K + L +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGIT-DILVVD-NLKDGTKFVNLVDLNIADYMDKEDFLIQ 59
Query: 71 GSFDSAVDGCDGVFHTAS--------------------------------PVIFLS---- 94
+ +FH + P ++ S
Sbjct: 60 IMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAAT 119
Query: 95 --------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI-----------HPG 129
+ P Y +K L +E + E +V H G
Sbjct: 120 YGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKG 179
Query: 130 T---VIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRY 186
+ V + N + L G ++F +++V DV ++ LE SG +
Sbjct: 180 SMASVAFHLNTQLNNGES---PKLFEGSENFKRDFVYVG--DVADVNLWFLENGV-SGIF 233
Query: 187 LLAGSVAQ-HSDILKFLREHYPTLL-----RSGKLEEKYQPTIKVSQERAKSLG--INFT 238
L A+ + ++ KL+ +YQ + ++ G F
Sbjct: 234 NLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFK 293
Query: 239 PWEVGVRGCIESLMEKG 255
GV + L
Sbjct: 294 TVAEGVTEYMAWLNRDA 310
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 3e-07
Identities = 40/232 (17%), Positives = 77/232 (33%), Gaps = 83/232 (35%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELDGATERLHLFKANLLE 69
V +TG G + S + +LLL+RG V D + + EHL++ T + ++ +
Sbjct: 24 VFITGICGQIGSHIAELLLERGDKV--VGIDNFATGRREHLKDHPNLT----FVEGSIAD 77
Query: 70 EGSFDSAVDGC--DGVFHTA-------SP-------------------------VIFLS- 94
+ + D V HTA ++
Sbjct: 78 HALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137
Query: 95 -----DNPQEW--------------YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP- 134
P + Y+++K+ E + + +G+D V V+GP
Sbjct: 138 ALCYGVKPIQQPVRLDHPRNPANSSYAISKSANE----DYLEYSGLDFVTFRLANVVGPR 193
Query: 135 --------FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178
FFQ + G + + F + ++D+ A +RA++
Sbjct: 194 NVSGPLPIFFQRLSE-GKKCFV----TKARRDFVF----VKDLARATVRAVD 236
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 7e-07
Identities = 43/228 (18%), Positives = 64/228 (28%), Gaps = 75/228 (32%)
Query: 13 VTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKA--NLLEE 70
+TG+ G V L L G+ V VR P L+ A++ L +L E
Sbjct: 152 ITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGE 211
Query: 71 GSFD-------------------------------------SAV-----DGCDGVFHTAS 88
F SAV D D + S
Sbjct: 212 PIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEES 271
Query: 89 PV--IFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG----------PFF 136
FL++ ++W E A A + G + I G + F
Sbjct: 272 ESGDDFLAEVCRDW--------EHATAP-ASDAGKRVAFIRTGVALSGRGGMLPLLKTLF 322
Query: 137 QPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 184
G +G F +I I D+ + RA+ + SG
Sbjct: 323 S--TGLGG----KFGDGTS--WFSWI--AIDDLTDIYYRAIVDAQISG 360
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 1 MMSGEGEEKVVCVTGAS-GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-- 57
M+ +K++ +TGAS GF + L G+ V A++RD ++ + G
Sbjct: 1 MVM---SKKIILITGASSGFGRLT-AEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD 56
Query: 58 --ERLHLFKANLLEEGSFDSAVD 78
L + ++ + S D A+D
Sbjct: 57 NDVDLRTLELDVQSQVSVDRAID 79
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 36/299 (12%), Positives = 74/299 (24%), Gaps = 85/299 (28%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ + G G + L + L +G+ V R + A++
Sbjct: 6 ILIAGC-GDLGLELARRLTAQGHEVTGLRRSA-----------QPMPAGVQTLIADVTRP 53
Query: 71 GSFDSAVDG-CDGVFHTASP------------------------------VIFLS----- 94
+ S V + + + + V F+S
Sbjct: 54 DTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVY 113
Query: 95 -DNPQEWYS----------LAKTLAE-EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNF 142
+EW K + E EA + + GP ++
Sbjct: 114 GQEVEEWLDEDTPPIAKDFSGKRMLEAEALLA-----AYSSTILRFSGIYGPGRLRMIRQ 168
Query: 143 GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP---KASGRYLLA-GSVAQHSDI 198
A+ + I + D ++ Y++ D+
Sbjct: 169 -AQTPEQWPARNAWTNR--IHRD--DGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDL 223
Query: 199 LKFLREHY----PTLLRSGKLEEKYQPTIKVSQERAKSLGINFT-P-WEVGVRGCIESL 251
L++L + P K K+S R + G P + G + ++
Sbjct: 224 LRWLADRQGIAYPAGATPPVQGNK-----KLSNARLLASGYQLIYPDYVSGYGALLAAM 277
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 3e-06
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHL---- 62
E+ V VTGA+G V V +L +RGY V A+ + ++L++L GA+E +
Sbjct: 150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE--AADYLKQL-GASEVISREDVY 206
Query: 63 -FKANLLEEGSFDSAVD 78
L + + AVD
Sbjct: 207 DGTLKALSKQQWQGAVD 223
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 3e-06
Identities = 33/232 (14%), Positives = 74/232 (31%), Gaps = 42/232 (18%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS---PKTEHLRELDGATERLHLFKANL 67
+ + G +G + +V ++ G A VR + P+T+ + + + L + ++
Sbjct: 5 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64
Query: 68 LEEGSFDSAVDGCDGVFHTASPV--------------------IFLS------DNPQEWY 101
+ + A+ D V A + F S D
Sbjct: 65 NDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVE 124
Query: 102 SLAKTLAE-EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILN---LI--NGDQ 155
+ + E + + + G+ + G F + + A +I +G+
Sbjct: 125 PVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNV 184
Query: 156 SFAFPYIFVEIRDVVYAHIRALEVPKASGRYL---LAGSVAQHSDILKFLRE 204
A +V DV IRA P + + L + ++++ +
Sbjct: 185 KGA----YVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEK 232
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 9e-06
Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 4/88 (4%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATER-L 60
M ++ V + G +G++ +V + G+ R + ++ L +
Sbjct: 1 MD---KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA 57
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTAS 88
L +A+L + A+ D V +
Sbjct: 58 KLIEASLDDHQRLVDALKQVDVVISALA 85
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-05
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 13 VTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+TGA+G + ++++ L++ + A VR+P K + L G T R +A+ +E
Sbjct: 4 ITGATGQLGHYVIESLMKTVPASQIVAIVRNPA--KAQALAA-QGITVR----QADYGDE 56
Query: 71 GSFDSAVDGCDGVF 84
+ SA+ G + +
Sbjct: 57 AALTSALQGVEKLL 70
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-05
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Query: 13 VTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
VTGA+G + +++ LL++ + A VR+ K L + G R + +
Sbjct: 5 VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVE--KASTLAD-QGVEVR----HGDYNQP 57
Query: 71 GSFDSAVDGCDGVF 84
S A G +
Sbjct: 58 ESLQKAFAGVSKLL 71
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-05
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 8 EKVVCVTGAS-GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKA 65
KV VTGAS GF + + + + G TV T R E L +L A +R
Sbjct: 5 AKVWLVTGASSGFGRA-IAEAAVAAGDTVIGTARRT-----EALDDLVAAYPDRAEAISL 58
Query: 66 NLLEEGSFDSAVD 78
++ + D
Sbjct: 59 DVTDGERIDVVAA 71
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-05
Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 11/91 (12%)
Query: 1 MMSGEGEEKVVCVTGAS---GFVASWLVKLLLQ---RGYTVKATVRDPNSPKTEHLRELD 54
++ + +TG + G LVK LL + T R+ K L +L
Sbjct: 14 LVPRGSHMNSILITGCNRGLGLG---LVKALLNLPQPPQHLFTTCRNREQAKE--LEDLA 68
Query: 55 GATERLHLFKANLLEEGSFDSAVDGCDGVFH 85
+H+ + +L ++D V +GV
Sbjct: 69 KNHSNIHILEIDLRNFDAYDKLVADIEGVTK 99
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 1e-05
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 13/81 (16%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+TG +GFV +L L ++ V T R N K + + + +++
Sbjct: 13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSR-NNEAKLPN----------VEMISLDIM 61
Query: 69 EEGSFDSAVDGC--DGVFHTA 87
+ + D +FH A
Sbjct: 62 DSQRVKKVISDIKPDYIFHLA 82
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGATERLHLFKA 65
+ + GA+G V L + L++ G T+ D P+ G + + A
Sbjct: 17 IAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-----AGFSGAVDARAA 71
Query: 66 NLLEEGSFDSAVD-GCDGVFHTAS 88
+L G + V+ D +FH A+
Sbjct: 72 DLSAPGEAEKLVEARPDVIFHLAA 95
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Query: 13 VTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG 71
+TGA+G + + + + VR+ K + R + + +
Sbjct: 5 LTGATGHLGTHITNQAIANHIDHFHIGVRNVE--KVPDDWR-GKVSVR----QLDYFNQE 57
Query: 72 SFDSAVDGCDGVF 84
S A G D V
Sbjct: 58 SMVEAFKGMDTVV 70
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHL---- 62
E V VTGA+G V S V +L +RGYTV+A+ + ++LR L GA E L
Sbjct: 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA--EHDYLRVL-GAKEVLAREDVM 205
Query: 63 -FKANLLEEGSFDSAVD 78
+ L++ + +AVD
Sbjct: 206 AERIRPLDKQRWAAAVD 222
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 2e-05
Identities = 36/219 (16%), Positives = 65/219 (29%), Gaps = 43/219 (19%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR--------- 51
M+G ++ G G+ A L + L +G+ + T R+P+ + E +R
Sbjct: 3 AMTG----TLLSF-GH-GYTARVLSRALAPQGWRIIGTSRNPD--QMEAIRASGAEPLLW 54
Query: 52 -----ELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLS------DNPQEW 100
LDG T L + + + D V +LS D+ W
Sbjct: 55 PGEEPSLDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAW 114
Query: 101 YS----------LAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNL 150
+ + + L + GP P G I +
Sbjct: 115 VDETTPLTPTAARGRWRVMAEQQ-WQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRI 173
Query: 151 INGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA 189
I Q F+ + + D+ ++ P Y +
Sbjct: 174 IKPGQVFS----RIHVEDIAQVLAASMARPDPGAVYNVC 208
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL 60
M + + V V G +GFV S LVK LL+ G + V D + + +
Sbjct: 25 MNASKLANTNVMVVGGAGFVGSNLVKRLLELGVN-QVHVVDNLL--SAEKINVPDH-PAV 80
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPV 90
+ ++ ++ S D D VFH A+
Sbjct: 81 RFSETSITDDALLASLQDEYDYVFHLATYH 110
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 3e-05
Identities = 36/294 (12%), Positives = 80/294 (27%), Gaps = 92/294 (31%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATER 59
M + + GA G + + L + L + G D T+ +
Sbjct: 1 MN------PKILIIGACGQIGTELTQKLRKLYGTENVIAS-DIRKLNTDVV-------NS 46
Query: 60 LHLFKANLLEEGSFDSAVD--GCDGVFHTA------------------------------ 87
N L+ + V+ ++ A
Sbjct: 47 GPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAK 106
Query: 88 ----SPVIFLS-------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLV 124
+ + S P Y ++K E + G+D+
Sbjct: 107 AKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVR 166
Query: 125 AIHPGTVIGPFFQP-------ILNFGAEVILN---LINGDQSFAFPYIFVEIRDVVYAHI 174
+I +I P ++ + I + P ++++ D + A I
Sbjct: 167 SIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMD--DAIDATI 224
Query: 175 RALEVPKASGRYLLAGSVAQHS----DILKFLREHYPTLLRSGKLEEKYQPTIK 224
++ P + + ++A S +I +++H P + Y+P +
Sbjct: 225 NIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIP------EFTITYEPDFR 272
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 3e-05
Identities = 22/211 (10%), Positives = 58/211 (27%), Gaps = 38/211 (18%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V + GA+GF+ ++ L R ++ + + + E+
Sbjct: 13 VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQ 72
Query: 71 GSFDSAVDGCD--------------------------GVFHTASPVIFLSD-NPQEWYSL 103
+ + + + G P F D N +
Sbjct: 73 EAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEP 132
Query: 104 AKTLAEE--AAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILN-----LINGDQS 156
+ E + +E+GI I ++ + ++ + +G+
Sbjct: 133 GLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVK 192
Query: 157 FAFPYIFVEIRDVVYAHIRALEVPKASGRYL 187
FV D+ ++ ++ + + +
Sbjct: 193 AY----FVAGTDIGKFTMKTVDDVRTLNKSV 219
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 5e-05
Identities = 25/115 (21%), Positives = 35/115 (30%), Gaps = 16/115 (13%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
K V + GA+G L+ +L V A R EH R LD L
Sbjct: 6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR---KALAEHPR-LDNPVGPLAELLPQ 61
Query: 67 LLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGI 121
L D F I + + + + ++ L K A E G
Sbjct: 62 LD---------GSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVG-KRALEMGA 106
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 6e-05
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V VTG +GF WL L G TVK P L E + + ++
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTA--PTVPSLFETARVADGMQSEIGDIR 67
Query: 69 EEGSFDSAVDGC--DGVFHTA 87
++ ++ + VFH A
Sbjct: 68 DQNKLLESIREFQPEIVFHMA 88
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 6e-05
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE---RLHLF 63
++ V VTGASG V S V LL + GY V A + +L+ L GA R
Sbjct: 146 QDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRES--THGYLKSL-GANRILSRDEFA 202
Query: 64 KANLLEEGSFDSAVD 78
++ LE+ + A+D
Sbjct: 203 ESRPLEKQLWAGAID 217
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 7e-05
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 15/80 (18%)
Query: 9 KVVCVTGAS-GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL------DGATERLH 61
K V +TGA G + + +++ LLQ G V T + T++ + + G+ L
Sbjct: 477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGS--TLI 534
Query: 62 LFKANLLEEGSF---DSAVD 78
+ N GS ++ ++
Sbjct: 535 VVPFNQ---GSKQDVEALIE 551
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 7e-05
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 17/91 (18%)
Query: 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGATER 59
E + K + +TG +GFV S L L+ G+ V T R N EH E
Sbjct: 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHWI----GHEN 76
Query: 60 LHLFKANLLEEGSFDSAVDGCDGVFHTASPV 90
L +++E + D ++H ASP
Sbjct: 77 FELINHDVVEPLYIE-----VDQIYHLASPA 102
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 2e-04
Identities = 22/217 (10%), Positives = 56/217 (25%), Gaps = 46/217 (21%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRD--PNSPKTEHLRELDGATERLHLFKAN 66
+ + + G +G++ ++V+ L + R P+S + + + + + +
Sbjct: 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64
Query: 67 LLEEGSFDSAVDGCDGVFHTASPVIFLS--------------------------DNPQEW 100
+ E S + D V + S D +
Sbjct: 65 MEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPL 124
Query: 101 YSLAKTLAE-EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI-------- 151
L + + + + + F +N+ +
Sbjct: 125 PPFESVLEKKRIIRRAIEAAALPYTYVSA----NCFGAYFVNYLLHPSPHPNRNDDIVIY 180
Query: 152 -NGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYL 187
G+ F D+ I+ P+ R +
Sbjct: 181 GTGETKFV----LNYEEDIAKYTIKVACDPRCCNRIV 213
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 2e-04
Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 27/114 (23%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV------RDPNSPKTEHLREL------ 53
E + V +TGA+GF+ +LV LL+R V + + L +
Sbjct: 71 PELRTVLLTGATGFLGRYLVLELLRRL-DVDGRLICLVRAESDEDAR-RRLEKTFDSGDP 128
Query: 54 -------DGATERLHLFKANL------LEEGSFDSAVDGCDGVFHTASPVIFLS 94
+ A +RL + + L++ + + D + +A+ V
Sbjct: 129 ELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFP 182
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 16/82 (19%)
Query: 2 MSGEGEEKVVCVTGAS---GFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGA 56
MS V VTGA+ G LV+ L++ + AT RD K L+ + +
Sbjct: 1 MS----PGSVVVTGANRGIGLG---LVQQLVKDKNIRHIIATARDVE--KATELKSIKDS 51
Query: 57 TERLHLFKANLLEEGSFDSAVD 78
R+H+ + + S D+ V
Sbjct: 52 --RVHVLPLTVTCDKSLDTFVS 71
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 258 | |||
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.97 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.97 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.97 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.96 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.96 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.96 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.95 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.95 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.95 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.95 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.95 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.94 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.94 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.94 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.93 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.93 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.93 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.93 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.93 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.92 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.91 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.91 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.91 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.91 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.9 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.9 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.9 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.9 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.89 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.89 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.89 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.88 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.88 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.88 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.88 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.88 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.88 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.88 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.87 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.87 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.87 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.87 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.87 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.87 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.86 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.86 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.86 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.86 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.86 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.86 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.86 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.86 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.86 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.86 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.86 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.85 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.85 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.85 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.85 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.85 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.85 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.85 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.85 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.85 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.85 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.85 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.85 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.85 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.85 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.85 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.84 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.84 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.84 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.84 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.84 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.84 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.84 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.84 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.84 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.84 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.84 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.84 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.84 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.84 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.84 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.84 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.84 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.84 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.84 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.84 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.84 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.84 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.84 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.83 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.83 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.83 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.83 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.83 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.83 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.83 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.83 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.83 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.83 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.83 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.83 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.83 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.83 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.83 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.83 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.83 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.83 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.83 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.83 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.83 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.82 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.82 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.82 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.82 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.82 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.82 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.82 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.82 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.82 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.82 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.82 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.82 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.82 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.82 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.82 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.82 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.82 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.82 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.81 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.81 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.81 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.81 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.81 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.81 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.81 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.81 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.81 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.81 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.81 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.81 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.81 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.81 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.81 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.81 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.81 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.81 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.81 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.81 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.81 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.8 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.8 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.8 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.8 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.8 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.8 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.8 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.8 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.8 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.8 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.8 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.8 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.8 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.8 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.8 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.8 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.8 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.8 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.8 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.8 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.8 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.8 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.8 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.8 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.8 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.79 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.79 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.79 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.79 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.79 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.79 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.79 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.79 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.79 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.79 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.79 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.79 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.79 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.78 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.78 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.78 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.78 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.78 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.78 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.77 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.77 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.77 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.77 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.77 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.76 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.76 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.76 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.76 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.76 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.75 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.75 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.75 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.75 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.75 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.75 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.75 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.75 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.74 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.74 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.73 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.73 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.73 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.73 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.71 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.71 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.71 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.71 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.7 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.68 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.66 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.66 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.65 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.65 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.64 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.64 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.61 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.6 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.59 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.58 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.57 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.54 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.49 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.48 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.42 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.28 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.28 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.27 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.26 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.26 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.25 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.24 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.22 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.22 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.22 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.06 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.01 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.94 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.84 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.81 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.8 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.77 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.77 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.75 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.75 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.73 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.73 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.69 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.65 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.64 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.61 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.6 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.45 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.39 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.32 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.3 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.28 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 98.25 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.23 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.15 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.09 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.08 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.07 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 98.03 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.03 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.99 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.96 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.95 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.95 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.95 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.94 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.8 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.79 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.79 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.78 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.77 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.76 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.75 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.75 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.74 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.72 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.7 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.68 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.68 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.67 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.67 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.63 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.61 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.6 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.59 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 97.58 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.57 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.56 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.55 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.54 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.52 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.51 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.49 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.44 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.44 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.43 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.43 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.43 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.42 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.42 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.42 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.42 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.41 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.41 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.39 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.38 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 97.37 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.37 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.35 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.35 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.34 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.33 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.32 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.32 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.31 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.3 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.3 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 97.3 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.29 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.28 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 97.28 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.28 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.28 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.27 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.25 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 97.25 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.25 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.23 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.22 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.21 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.2 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.19 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 97.18 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.18 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.17 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.16 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.15 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.15 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 97.14 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 97.14 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.13 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.12 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.09 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.09 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.08 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 97.08 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.07 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.02 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 97.02 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.01 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.01 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.01 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.99 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.99 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.98 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.98 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.98 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.97 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.96 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.95 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 96.95 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.95 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.94 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 96.93 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.93 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 96.93 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 96.93 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.92 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 96.92 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.91 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.91 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 96.9 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 96.9 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.89 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.88 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 96.88 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 96.87 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 96.87 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.86 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.86 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 96.84 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.84 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.84 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 96.83 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 96.83 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 96.83 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.82 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.82 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.81 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.81 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 96.81 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.81 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.81 | |
| 2rcy_A | 262 | Pyrroline carboxylate reductase; malaria, structur | 96.81 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.8 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.8 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.8 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.77 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.77 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.76 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 96.76 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 96.76 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 96.76 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.76 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.76 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.75 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 96.75 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 96.74 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 96.74 | |
| 1qp8_A | 303 | Formate dehydrogenase; oxidoreductase; HET: NDP; 2 | 96.73 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 96.73 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.72 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 96.72 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 96.72 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 96.71 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.71 |
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=275.44 Aligned_cols=247 Identities=13% Similarity=0.179 Sum_probs=191.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--Cc
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CD 81 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d 81 (258)
+++|+|||||||||||++|+++|+++| ++|++++|.........+.... ...+++++.+|++|++.+.+++++ +|
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 357899999999999999999999999 7788888765443322222221 135799999999999999999987 99
Q ss_pred EEEecCCCCCCC--CCCch----------------------------------------------------hhHHHHHHH
Q 025065 82 GVFHTASPVIFL--SDNPQ----------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 82 ~Vih~a~~~~~~--~~~~~----------------------------------------------------~~Y~~sK~~ 107 (258)
+|||+|+..... ..++. +.|+.+|.+
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 180 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKAS 180 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHH
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHH
Confidence 999999975432 11111 469999999
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCC
Q 025065 108 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 108 ~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
+|.+++.++++++++++++||++||||+.... .....++..+..+. ..++ ..++|+|++|+|++++.+++++..
T Consensus 181 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 259 (346)
T 4egb_A 181 ADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRV 259 (346)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCC
Confidence 99999999988899999999999999987543 34455667777776 2333 778999999999999999998775
Q ss_pred CceEEE-eCCCcCHHHHHHHHHHhCCCCCC-CCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 183 SGRYLL-AGSVAQHSDILKFLREHYPTLLR-SGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 183 ~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~-~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+++|++ +++.+|+.|+++.+.+.+|.... ..... ........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 260 g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (346)
T 4egb_A 260 GEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKN 337 (346)
T ss_dssp TCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred CCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 558855 56789999999999999976431 11111 33445677999999 7899999 89999999999999875
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=268.02 Aligned_cols=237 Identities=14% Similarity=0.130 Sum_probs=189.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+|+|||||||||||++|+++|+++|++|++++|++... . + ++++++.+|++ .+.+.++++++|+|||+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~-~-------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a 70 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK--A-I-------NDYEYRVSDYT-LEDLINQLNDVDAVVHLA 70 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTTTCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc--c-C-------CceEEEEcccc-HHHHHHhhcCCCEEEEcc
Confidence 46899999999999999999999999999999983221 1 1 26899999999 999999999999999999
Q ss_pred CCCCCCCCCch-------------------------------------------------hhHHHHHHHHHHHHHHHHHH
Q 025065 88 SPVIFLSDNPQ-------------------------------------------------EWYSLAKTLAEEAAWKFAKE 118 (258)
Q Consensus 88 ~~~~~~~~~~~-------------------------------------------------~~Y~~sK~~~e~~~~~~~~~ 118 (258)
+.......... +.|+.+|.++|++++.++++
T Consensus 71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 150 (311)
T 3m2p_A 71 ATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK 150 (311)
T ss_dssp CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 98644311000 47999999999999999998
Q ss_pred cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCceEE-EeCCC
Q 025065 119 NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYL-LAGSV 192 (258)
Q Consensus 119 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~-~~~~~ 192 (258)
++++++++||+.+|||...+. .....++..+..|. ..++ +.++|+|++|+|++++.+++++...++|+ ++++.
T Consensus 151 ~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i~~~~~ 229 (311)
T 3m2p_A 151 KGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDA 229 (311)
T ss_dssp SCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEECCSCE
T ss_pred cCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEeCCCCc
Confidence 999999999999999987653 33455666767776 3333 78999999999999999999887566884 45889
Q ss_pred cCHHHHHHHHHHhCCCCCCCCCC---ccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHcCC
Q 025065 193 AQHSDILKFLREHYPTLLRSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEKGF 256 (258)
Q Consensus 193 ~t~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~~~ 256 (258)
+|+.|+++.+.+.+|........ .........+|++|+ +.|||+| ++++++|+++++|++.++.
T Consensus 230 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 298 (311)
T 3m2p_A 230 LTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDD 298 (311)
T ss_dssp ECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC---
T ss_pred ccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhccc
Confidence 99999999999999754321111 134566788999999 6699999 7999999999999987654
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=275.97 Aligned_cols=248 Identities=17% Similarity=0.173 Sum_probs=192.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc-----CCcEEEEEccCCCcccHHHHhCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-----TERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
|++|+|||||||||||++|+++|+++|++|++++|+...... .+..+... ..+++++.+|+++++.+.++++++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY-NLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHH-HHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchh-hhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 356899999999999999999999999999999998754322 11111000 047899999999999999999999
Q ss_pred cEEEecCCCCCC--CCCCch---------------------------------------------------hhHHHHHHH
Q 025065 81 DGVFHTASPVIF--LSDNPQ---------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 81 d~Vih~a~~~~~--~~~~~~---------------------------------------------------~~Y~~sK~~ 107 (258)
|+|||+|+.... ...++. +.|+.+|.+
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~ 181 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYV 181 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHH
Confidence 999999996421 101110 579999999
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC---CccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcC
Q 025065 108 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 108 ~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+|++++.+++++|++++++||++||||+..... .....++..+..+. .+++ +.++|+|++|+|++++.++.+
T Consensus 182 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 261 (351)
T 3ruf_A 182 NEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALA 261 (351)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence 999999999888999999999999999876432 22355666677776 2223 788999999999999999988
Q ss_pred C-C-CCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCC-------ccCCCCccccCHHHH-HhcCCCc-cchhHHHHHH
Q 025065 180 P-K-ASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKL-------EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGC 247 (258)
Q Consensus 180 ~-~-~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~ 247 (258)
+ . .+++|++ +++.+|+.|+++.+.+.+|..+..... .........+|++|+ +.|||+| ++++++|+++
T Consensus 262 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~ 341 (351)
T 3ruf_A 262 KDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLS 341 (351)
T ss_dssp CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred ccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCCCCCHHHHHHHH
Confidence 3 3 3448855 588999999999999998763211111 133445778999999 7799999 8999999999
Q ss_pred HHHHHHc
Q 025065 248 IESLMEK 254 (258)
Q Consensus 248 ~~~~~~~ 254 (258)
++|++++
T Consensus 342 ~~~~~~~ 348 (351)
T 3ruf_A 342 MPWYVRF 348 (351)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999874
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=265.21 Aligned_cols=252 Identities=42% Similarity=0.716 Sum_probs=188.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
++++||||||+||||++|+++|+++|++|++++|+...... ..+..+.....+++++.+|+++++++.++++++|+|||
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 46899999999999999999999999999999997653211 11111111113588999999999999999999999999
Q ss_pred cCCCCCCCCCCch---------------------------------h-------------------------------hH
Q 025065 86 TASPVIFLSDNPQ---------------------------------E-------------------------------WY 101 (258)
Q Consensus 86 ~a~~~~~~~~~~~---------------------------------~-------------------------------~Y 101 (258)
+|+.......++. . .|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 163 (337)
T 2c29_D 84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY 163 (337)
T ss_dssp CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence 9987532222111 0 39
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC--CCcceeeHHHHHHHHHHhhc
Q 025065 102 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA--FPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~--~~~~~i~v~D~a~~~~~~~~ 178 (258)
+.+|.++|.++..+.+++|++++++||++||||..................|. ..+. ...+|+|++|+|++++.+++
T Consensus 164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 243 (337)
T 2c29_D 164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFE 243 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhc
Confidence 99999999999988877899999999999999976543221111111123444 2222 33459999999999999998
Q ss_pred CCCCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHcC
Q 025065 179 VPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKG 255 (258)
Q Consensus 179 ~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~~ 255 (258)
++...+.|+++++.+|+.|+++.+.+.++...+|.... ........+|++|+++|||+| ++++++|+++++|+++++
T Consensus 244 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~~~~ 323 (337)
T 2c29_D 244 NPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKG 323 (337)
T ss_dssp CTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHHHHHTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred CcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHHHHcCCCcCCCHHHHHHHHHHHHHHcC
Confidence 87666788888888999999999999886544443221 223346678999997799999 899999999999999988
Q ss_pred CCC
Q 025065 256 FLS 258 (258)
Q Consensus 256 ~~~ 258 (258)
+++
T Consensus 324 ~~~ 326 (337)
T 2c29_D 324 LLP 326 (337)
T ss_dssp SSC
T ss_pred CCC
Confidence 764
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=264.70 Aligned_cols=250 Identities=38% Similarity=0.608 Sum_probs=186.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
+|+||||||+||||++|+++|+++||+|++++|+...... ..+..+. ...+++++++|+++++.+.++++++|+|||+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 5789999999999999999999999999999987654221 1111111 1246889999999999999999999999999
Q ss_pred CCCCCCCCCCc---h------------------------------h---------------------------------h
Q 025065 87 ASPVIFLSDNP---Q------------------------------E---------------------------------W 100 (258)
Q Consensus 87 a~~~~~~~~~~---~------------------------------~---------------------------------~ 100 (258)
|+.......++ . . .
T Consensus 88 A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 167 (338)
T 2rh8_A 88 ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWG 167 (338)
T ss_dssp SSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCC
T ss_pred CCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccch
Confidence 98753221111 1 1 3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---------CCcceeeHHHHH
Q 025065 101 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---------FPYIFVEIRDVV 170 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---------~~~~~i~v~D~a 170 (258)
|+.+|.++|.+++.+.+++|++++++||++||||............+.....|. ..++ ..++|+|++|+|
T Consensus 168 Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva 247 (338)
T 2rh8_A 168 YPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVC 247 (338)
T ss_dssp CTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHHH
Confidence 899999999999998877899999999999999986543222111222223443 1111 234899999999
Q ss_pred HHHHHhhcCCCCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCcc-CCCCccccCHHHHHhcCCCc-cchhHHHHHHH
Q 025065 171 YAHIRALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEE-KYQPTIKVSQERAKSLGINF-TPWEVGVRGCI 248 (258)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~ 248 (258)
++++.+++++...+.|+++++.+|+.|+++.+.+.++...+|..... .......+|++|+++|||+| ++++++|++++
T Consensus 248 ~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~~gl~~~~ 327 (338)
T 2rh8_A 248 RAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKLIISSEKLVKEGFSFKYGIEEIYDESV 327 (338)
T ss_dssp HHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCCCCTTSCSSCSCCCCCHHHHHHTCCCSCCHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCcCcceeechHHHHHhCCCCCCCHHHHHHHHH
Confidence 99999998766667888887789999999999998864444432211 11223789999997799999 89999999999
Q ss_pred HHHHHcCCCC
Q 025065 249 ESLMEKGFLS 258 (258)
Q Consensus 249 ~~~~~~~~~~ 258 (258)
+|++++++++
T Consensus 328 ~~~~~~~~~~ 337 (338)
T 2rh8_A 328 EYFKAKGLLQ 337 (338)
T ss_dssp HHHHHTTCC-
T ss_pred HHHHHcCCCC
Confidence 9999998764
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=267.96 Aligned_cols=246 Identities=15% Similarity=0.135 Sum_probs=187.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V 83 (258)
+|+||||||+||||++|+++|+++|++|++++|+...... ..+... ...++.++.+|+++++++.++++ ++|+|
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI--TGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHH--HSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhh--cCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 6799999999999999999999999999999997765432 111111 12468999999999999999998 89999
Q ss_pred EecCCCCCCC--CCCch---------------------------------------------------hhHHHHHHHHHH
Q 025065 84 FHTASPVIFL--SDNPQ---------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 84 ih~a~~~~~~--~~~~~---------------------------------------------------~~Y~~sK~~~e~ 110 (258)
||+|+..... ...+. +.|+.+|.++|.
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 162 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQ 162 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHH
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence 9999975321 11110 479999999999
Q ss_pred HHHHHHHHcC-CcEEEEcCCccccCCcCCC--------CCccHHHHHHHHcCC-CC-----------CC-CCcceeeHHH
Q 025065 111 AAWKFAKENG-IDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGD-QS-----------FA-FPYIFVEIRD 168 (258)
Q Consensus 111 ~~~~~~~~~~-~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~g~-~~-----------~~-~~~~~i~v~D 168 (258)
+++.++.+.+ ++++++||+++|||..... ......++.+...+. .. -+ +.++|+|++|
T Consensus 163 ~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D 242 (341)
T 3enk_A 163 ILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVD 242 (341)
T ss_dssp HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHH
T ss_pred HHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHH
Confidence 9999988876 9999999999999965211 112223444444443 11 12 6789999999
Q ss_pred HHHHHHHhhcCC---CCCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCC--ccCCCCccccCHHHH-HhcCCCc-cch
Q 025065 169 VVYAHIRALEVP---KASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERA-KSLGINF-TPW 240 (258)
Q Consensus 169 ~a~~~~~~~~~~---~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~--~~~~~~~~~~d~~k~-~~lg~~p-~~~ 240 (258)
+|++++.+++++ ..+++|++ +++.+|+.|+++.+.+.+|........ .........+|++|+ +.|||+| +++
T Consensus 243 va~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l 322 (341)
T 3enk_A 243 LARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAETIGWKAERDL 322 (341)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHHHHCCCCCCCH
T ss_pred HHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCCccccccCHHHHHHHcCCCCCCCH
Confidence 999999999862 33458855 588999999999999998753211111 133445678999999 7899999 999
Q ss_pred hHHHHHHHHHHHHcC
Q 025065 241 EVGVRGCIESLMEKG 255 (258)
Q Consensus 241 ~~~l~~~~~~~~~~~ 255 (258)
+++|+++++|++++.
T Consensus 323 ~~~l~~~~~~~~~~~ 337 (341)
T 3enk_A 323 ERMCADHWRWQENNP 337 (341)
T ss_dssp HHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999874
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-38 Score=261.71 Aligned_cols=250 Identities=35% Similarity=0.597 Sum_probs=184.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEc-CCCCcc-chhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVR-DPNSPK-TEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+|+||||||+||||++|+++|+++|++|++++| ++.... ...+..+.....+++++.+|++|++.+.++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 478999999999999999999999999999988 542211 111111111113578899999999999999999999999
Q ss_pred cCCCCCCCCCCc---h------------------------------h-------------------------------hH
Q 025065 86 TASPVIFLSDNP---Q------------------------------E-------------------------------WY 101 (258)
Q Consensus 86 ~a~~~~~~~~~~---~------------------------------~-------------------------------~Y 101 (258)
+|+.......++ . . .|
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y 160 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY 160 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccH
Confidence 997542221111 0 1 49
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcC
Q 025065 102 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+.+|.++|.++.++.+++|++++++||++||||............+.....|. ..++ ..++|+|++|+|++++.++++
T Consensus 161 ~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 240 (322)
T 2p4h_X 161 AVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLEN 240 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhC
Confidence 99999999999998888899999999999999976543221111222234454 3344 334899999999999999987
Q ss_pred CCCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCC--Cc-cCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHcC
Q 025065 180 PKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGK--LE-EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKG 255 (258)
Q Consensus 180 ~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~--~~-~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~~ 255 (258)
+...|.|+++++.+|+.|+++.+.+.++..++|.. .. ........+|++|+++|||+| ++++++|+++++|+++++
T Consensus 241 ~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~~ 320 (322)
T 2p4h_X 241 SVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKG 320 (322)
T ss_dssp CCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCCCEECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCCCCcceecccHHHHHhCCccCCCHHHHHHHHHHHHHhcC
Confidence 66566788778899999999999998865444432 11 111145678999997799999 899999999999999988
Q ss_pred CC
Q 025065 256 FL 257 (258)
Q Consensus 256 ~~ 257 (258)
++
T Consensus 321 ~~ 322 (322)
T 2p4h_X 321 YL 322 (322)
T ss_dssp CC
T ss_pred CC
Confidence 65
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=267.58 Aligned_cols=246 Identities=19% Similarity=0.174 Sum_probs=189.3
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHH--CCCEEEEEEcCCCCccc--------hhhccccCcCCcEEEEEccCCCcccH
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQ--RGYTVKATVRDPNSPKT--------EHLRELDGATERLHLFKANLLEEGSF 73 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~~~~~Dl~~~~~~ 73 (258)
+.|++|+||||||+||||++|+++|++ +|++|++++|+...... ...... ...++.++.+|+++++.+
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~ 83 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--IGFKGEVIAADINNPLDL 83 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG--TTCCSEEEECCTTCHHHH
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc--cccCceEEECCCCCHHHH
Confidence 345789999999999999999999999 99999999997652110 001111 134679999999999999
Q ss_pred HHH-hCCCcEEEecCCCCCCCCCCch-------------------------------------------------hhHHH
Q 025065 74 DSA-VDGCDGVFHTASPVIFLSDNPQ-------------------------------------------------EWYSL 103 (258)
Q Consensus 74 ~~~-~~~~d~Vih~a~~~~~~~~~~~-------------------------------------------------~~Y~~ 103 (258)
.++ ..++|+|||+|+.......++. +.|+.
T Consensus 84 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~ 163 (362)
T 3sxp_A 84 RRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNVVGKNESPENVYGF 163 (362)
T ss_dssp HHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHH
T ss_pred HHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHH
Confidence 998 7889999999997654333322 34999
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC---CccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHH
Q 025065 104 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 104 sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~ 175 (258)
+|.++|.+++.++.+ ++++++||+++|||+..... .....++..+..+. ..++ +.++|+|++|+|++++.
T Consensus 164 sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~ 241 (362)
T 3sxp_A 164 SKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVK 241 (362)
T ss_dssp HHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHH
Confidence 999999998887655 89999999999999876431 23455666777776 3333 77899999999999999
Q ss_pred hhcCCCCCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCC-c-cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHH
Q 025065 176 ALEVPKASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKL-E-EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIES 250 (258)
Q Consensus 176 ~~~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~-~-~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~ 250 (258)
+++++. .|+|++ +++.+|+.|+++.+.+.+|..++.... . ........+|++|+ +.|||+| ++++++|+++++|
T Consensus 242 ~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~ 320 (362)
T 3sxp_A 242 AMKAQK-SGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPH 320 (362)
T ss_dssp HTTCSS-CEEEEESCSCEEEHHHHHHHHHHHHCCCEEECCC-------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_pred HHhcCC-CCEEEeCCCCCccHHHHHHHHHHHcCCCceEECCCCCcCcccceecCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 999875 458855 578999999999999999822211111 1 23456778999999 8899999 8999999999999
Q ss_pred HHHc
Q 025065 251 LMEK 254 (258)
Q Consensus 251 ~~~~ 254 (258)
++++
T Consensus 321 ~~~~ 324 (362)
T 3sxp_A 321 IHAI 324 (362)
T ss_dssp HTCC
T ss_pred HHHH
Confidence 9754
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=260.47 Aligned_cols=236 Identities=19% Similarity=0.216 Sum_probs=180.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
||+||||||+||||++|+++|+++| .++++++....... .. ..++.++.+|+++ +++.++++++|+|||+|
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~-~~------~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a 71 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEE-FV------NEAARLVKADLAA-DDIKDYLKGAEEVWHIA 71 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGG-GS------CTTEEEECCCTTT-SCCHHHHTTCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChh-hc------CCCcEEEECcCCh-HHHHHHhcCCCEEEECC
Confidence 3679999999999999999999999 55555544332211 11 2568999999999 99999999999999999
Q ss_pred CCCCC--CCCCch---------------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 88 SPVIF--LSDNPQ---------------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 88 ~~~~~--~~~~~~---------------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
+.... ...++. +.|+.+|..+|.+++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 151 (313)
T 3ehe_A 72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIES 151 (313)
T ss_dssp CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 96432 222222 4699999999999999
Q ss_pred HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC---CCCC---CCcceeeHHHHHHHHHHhhcCCCCCceEEE
Q 025065 115 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRYLL 188 (258)
Q Consensus 115 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~---~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~ 188 (258)
++.++|++++++||++||||+... .....++.++..+. ..++ +.++|+|++|+|++++.+++.....++|++
T Consensus 152 ~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni 229 (313)
T 3ehe_A 152 YCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNI 229 (313)
T ss_dssp HHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEEEC
T ss_pred HHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceEEE
Confidence 999999999999999999998664 23445566666664 2343 678999999999999999995555568854
Q ss_pred -eCCCcCHHHHHHHHHHhCCCCCCCCCCc-----cCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 189 -AGSVAQHSDILKFLREHYPTLLRSGKLE-----EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 189 -~~~~~t~~e~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+++++|+.|+++.+.+.+|..+...... ........+|++|+++|||+| ++++++|+++++|++++
T Consensus 230 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~ 302 (313)
T 3ehe_A 230 GSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVED 302 (313)
T ss_dssp CCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHhC
Confidence 5789999999999999997542111111 223345679999997799999 89999999999999875
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=260.58 Aligned_cols=237 Identities=19% Similarity=0.220 Sum_probs=186.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|+|||||||||||++|+++|+++|++|++++|+....... . ..+++++.+|+++.+ +.+++++ |+|||+|+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~------~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~ 71 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-V------NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAA 71 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-S------CTTSEEECCCTTSTT-TTTTCCC-SEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-c------CCCceEEECccccHH-HHhhcCC-CEEEECCC
Confidence 5799999999999999999999999999999876543221 0 256899999999998 8888887 99999999
Q ss_pred CCCC--CCCCch---------------------------------------------------hhHHHHHHHHHHHHHHH
Q 025065 89 PVIF--LSDNPQ---------------------------------------------------EWYSLAKTLAEEAAWKF 115 (258)
Q Consensus 89 ~~~~--~~~~~~---------------------------------------------------~~Y~~sK~~~e~~~~~~ 115 (258)
.... ...++. +.|+.+|.++|.+++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~ 151 (312)
T 3ko8_A 72 NPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATY 151 (312)
T ss_dssp SCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence 6432 111111 56999999999999999
Q ss_pred HHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC---CCCC---CCcceeeHHHHHHHHHHhhcC---CC-CCce
Q 025065 116 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA---FPYIFVEIRDVVYAHIRALEV---PK-ASGR 185 (258)
Q Consensus 116 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~---~~~~---~~~~~i~v~D~a~~~~~~~~~---~~-~~~~ 185 (258)
+.+++++++++||+++|||.... .....++.++..+. ..++ +.++|+|++|+|++++.++++ +. ..++
T Consensus 152 ~~~~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ 229 (312)
T 3ko8_A 152 ARLFGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLA 229 (312)
T ss_dssp HHHHCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEE
T ss_pred HHHhCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcE
Confidence 99899999999999999998654 23445566666664 2333 778999999999999999987 33 3447
Q ss_pred EEE-eCCCcCHHHHHHHHHHhCCCCCC----CCCC----ccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 186 YLL-AGSVAQHSDILKFLREHYPTLLR----SGKL----EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 186 ~~~-~~~~~t~~e~~~~i~~~~~~~~~----~~~~----~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
|++ +++.+|+.|+++.+.+.+|..+. |... .........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 230 ~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 309 (312)
T 3ko8_A 230 LNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKE 309 (312)
T ss_dssp EEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHH
T ss_pred EEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 855 47899999999999999875321 1110 023345678999999 8899999 89999999999999987
Q ss_pred CC
Q 025065 255 GF 256 (258)
Q Consensus 255 ~~ 256 (258)
++
T Consensus 310 ~~ 311 (312)
T 3ko8_A 310 LW 311 (312)
T ss_dssp HC
T ss_pred hc
Confidence 64
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=258.42 Aligned_cols=246 Identities=15% Similarity=0.202 Sum_probs=187.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
++|+||||||+||||++|+++|+++| ++|++++|.........+..+.. ..+++++.+|+++++.+.+++.++|+||
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 80 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLED-DPRYTFVKGDVADYELVKELVRKVDGVV 80 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhcc-CCceEEEEcCCCCHHHHHHHhhCCCEEE
Confidence 35689999999999999999999986 89999998753322222222211 3578999999999999999999999999
Q ss_pred ecCCCCCCC--CCCc----------------------------------------------------hhhHHHHHHHHHH
Q 025065 85 HTASPVIFL--SDNP----------------------------------------------------QEWYSLAKTLAEE 110 (258)
Q Consensus 85 h~a~~~~~~--~~~~----------------------------------------------------~~~Y~~sK~~~e~ 110 (258)
|+|+..... ..++ .+.|+.+|.++|.
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 160 (336)
T 2hun_A 81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM 160 (336)
T ss_dssp ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence 999974310 0000 0479999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCce
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGR 185 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~ 185 (258)
+++.++.+++++++++||+.||||..... .....++..+..+. +.++ +.++|+|++|+|++++.+++++..+++
T Consensus 161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~ 239 (336)
T 2hun_A 161 LVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGESREI 239 (336)
T ss_dssp HHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCCCCE
Confidence 99999988999999999999999986432 22344556666665 3333 678999999999999999987654458
Q ss_pred EEEe-CCCcCHHHHHHHHHHhCCCCC-CCCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 186 YLLA-GSVAQHSDILKFLREHYPTLL-RSGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 186 ~~~~-~~~~t~~e~~~~i~~~~~~~~-~~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
|+++ ++.+|+.|+++.+.+.+|... ...... ........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 240 ~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 314 (336)
T 2hun_A 240 YNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN 314 (336)
T ss_dssp EEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred EEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence 8555 678999999999999997532 111111 12233467899999 7799999 89999999999999865
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=264.70 Aligned_cols=235 Identities=20% Similarity=0.205 Sum_probs=185.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.++|+|||||||||||++|+++|+++|++|++++|++.. .++.++.+|+++.+.+.++++++|+|||
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~~~d~vih 83 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIMGVSAVLH 83 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHhCCCEEEE
Confidence 356899999999999999999999999999999998644 2567899999999999999999999999
Q ss_pred cCCCCCCCCCCch-----------------------------------------------------hhHHHHHHHHHHHH
Q 025065 86 TASPVIFLSDNPQ-----------------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 86 ~a~~~~~~~~~~~-----------------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
+|+.......... +.|+.+|.++|+++
T Consensus 84 ~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~ 163 (347)
T 4id9_A 84 LGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELV 163 (347)
T ss_dssp CCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred CCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence 9997543222111 46999999999999
Q ss_pred HHHHHHcCCcEEEEcCCccc-------------cCCcCCC----------CCccHHHHHHHHcCCC--CCC---CCcce-
Q 025065 113 WKFAKENGIDLVAIHPGTVI-------------GPFFQPI----------LNFGAEVILNLINGDQ--SFA---FPYIF- 163 (258)
Q Consensus 113 ~~~~~~~~~~~~ilRp~~v~-------------G~~~~~~----------~~~~~~~~~~~~~g~~--~~~---~~~~~- 163 (258)
+.++++++++++++||+++| ||+.... ......++.....|.+ .++ ..++|
T Consensus 164 ~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 243 (347)
T 4id9_A 164 RFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFR 243 (347)
T ss_dssp HHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCE
T ss_pred HHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCc
Confidence 99999999999999999999 7764321 1223444555555652 232 67888
Q ss_pred ---eeHHHHHHHHHHhhcCCC-CCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCCccCCCCccccCHHHH-HhcCCCc
Q 025065 164 ---VEIRDVVYAHIRALEVPK-ASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKVSQERA-KSLGINF 237 (258)
Q Consensus 164 ---i~v~D~a~~~~~~~~~~~-~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p 237 (258)
+|++|+|++++.+++++. .+++|++ +++.+|+.|+++.+.+.+|... +....+.......+|++|+ +.|||+|
T Consensus 244 ~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~~~~~~d~~k~~~~lG~~p 322 (347)
T 4id9_A 244 MHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPI-VTVDFPGDGVYYHTSNERIRNTLGFEA 322 (347)
T ss_dssp ECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCE-EEEECSSCCCBCCBCCHHHHHHHCCCC
T ss_pred cCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCC-ceeeCCCcccccccCHHHHHHHhCCCC
Confidence 999999999999999984 4458855 5788999999999999997532 1111123333778999999 7799999
Q ss_pred -cchhHHHHHHHHHHHHc
Q 025065 238 -TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 238 -~~~~~~l~~~~~~~~~~ 254 (258)
++++++|+++++|++++
T Consensus 323 ~~~~~~~l~~~~~~~~~~ 340 (347)
T 4id9_A 323 EWTMDRMLEEAATARRQR 340 (347)
T ss_dssp CCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhh
Confidence 89999999999999875
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=268.65 Aligned_cols=242 Identities=17% Similarity=0.277 Sum_probs=187.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCC-CcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~V 83 (258)
|+||+|||||||||||++|+++|+++ |++|++++|+...... +.. ..+++++.+|++ +.+.+.++++++|+|
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~----~~~v~~~~~Dl~~d~~~~~~~~~~~d~V 95 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGD--LVK----HERMHFFEGDITINKEWVEYHVKKCDVI 95 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGG--GGG----STTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhh--hcc----CCCeEEEeCccCCCHHHHHHHhccCCEE
Confidence 56789999999999999999999998 9999999998754321 111 257999999999 999999999999999
Q ss_pred EecCCCCCCCC--CCc---------------------------------------------------------hhhHHHH
Q 025065 84 FHTASPVIFLS--DNP---------------------------------------------------------QEWYSLA 104 (258)
Q Consensus 84 ih~a~~~~~~~--~~~---------------------------------------------------------~~~Y~~s 104 (258)
||+|+...... .++ .+.|+.+
T Consensus 96 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~s 175 (372)
T 3slg_A 96 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACS 175 (372)
T ss_dssp EECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHH
T ss_pred EEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHH
Confidence 99999743210 000 0269999
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC-------CccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHH
Q 025065 105 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL-------NFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYA 172 (258)
Q Consensus 105 K~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-------~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~ 172 (258)
|.++|++++.++++ +++++++||++||||+..+.. .....++..+..|. .+++ +.++|+|++|+|++
T Consensus 176 K~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 254 (372)
T 3slg_A 176 KQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISA 254 (372)
T ss_dssp HHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHH
T ss_pred HHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHH
Confidence 99999999998877 999999999999999865311 12355666667776 2333 78899999999999
Q ss_pred HHHhhcCCC---CCceEEEeC--CCcCHHHHHHHHHHhCCCCCCCCC----Cc-------------cCCCCccccCHHHH
Q 025065 173 HIRALEVPK---ASGRYLLAG--SVAQHSDILKFLREHYPTLLRSGK----LE-------------EKYQPTIKVSQERA 230 (258)
Q Consensus 173 ~~~~~~~~~---~~~~~~~~~--~~~t~~e~~~~i~~~~~~~~~~~~----~~-------------~~~~~~~~~d~~k~ 230 (258)
++.+++++. .+++|++++ +.+|+.|+++.+.+.+|....... .. ........+|++|+
T Consensus 255 ~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~ 334 (372)
T 3slg_A 255 LMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENT 334 (372)
T ss_dssp HHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCBCCHHH
T ss_pred HHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeecCHHHH
Confidence 999999875 344886554 699999999999999864321000 00 02445678899999
Q ss_pred -HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 231 -KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 231 -~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+.|||+| ++++++|+++++|++++
T Consensus 335 ~~~lG~~p~~~l~e~l~~~~~~~~~~ 360 (372)
T 3slg_A 335 MQELGWAPQFTFDDALRQIFEAYRGH 360 (372)
T ss_dssp HHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 7799999 89999999999999754
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=259.46 Aligned_cols=248 Identities=19% Similarity=0.181 Sum_probs=188.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-----cCCcEEEEEccCCCcccHHHHhCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-----ATERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
|++|+|||||||||||++|+++|+++|++|++++|+...... .+..+.. ...++.++.+|+++++.+.++++++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR-NLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHH-HHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchh-hHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 457899999999999999999999999999999997643211 1111000 0147899999999999999999999
Q ss_pred cEEEecCCCCCCC--CCCch---------------------------------------------------hhHHHHHHH
Q 025065 81 DGVFHTASPVIFL--SDNPQ---------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 81 d~Vih~a~~~~~~--~~~~~---------------------------------------------------~~Y~~sK~~ 107 (258)
|+|||+|+..... ..++. +.|+.+|.+
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~ 183 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYV 183 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence 9999999974310 01111 379999999
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC---CccHHHHHHHHcCCC--CCC---CCcceeeHHHHHHHHHHhhcC
Q 025065 108 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGDQ--SFA---FPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 108 ~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~g~~--~~~---~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+|.+++.++.+.+++++++||+.||||...... .....++..+..|.+ +++ +.++|+|++|+|++++.++.+
T Consensus 184 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 263 (352)
T 1sb8_A 184 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA 263 (352)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence 999999998888999999999999999865431 123445566666662 222 678999999999999999887
Q ss_pred C-C-CCceEEE-eCCCcCHHHHHHHHHHhC---CCCCC--CCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHH
Q 025065 180 P-K-ASGRYLL-AGSVAQHSDILKFLREHY---PTLLR--SGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGC 247 (258)
Q Consensus 180 ~-~-~~~~~~~-~~~~~t~~e~~~~i~~~~---~~~~~--~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~ 247 (258)
+ . .+++|++ +++.+|+.|+++.+.+.+ |.... |.... ........+|++|+ +.|||+| ++++++|+++
T Consensus 264 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~ 343 (352)
T 1sb8_A 264 GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALA 343 (352)
T ss_dssp CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHH
T ss_pred cccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCCCHHHHHHHH
Confidence 3 2 3448855 578999999999999998 64321 11111 22344667899999 7799999 8999999999
Q ss_pred HHHHHHc
Q 025065 248 IESLMEK 254 (258)
Q Consensus 248 ~~~~~~~ 254 (258)
++|++++
T Consensus 344 ~~~~~~~ 350 (352)
T 1sb8_A 344 MPWYIMF 350 (352)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999864
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=254.49 Aligned_cols=240 Identities=21% Similarity=0.256 Sum_probs=184.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
++|+||||||+||||++|+++|+++|++|++++|++.... .+. ..+++++.+|++|++.+.++++++|+|||+
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~l~-----~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ--RLA-----YLEPECRVAEMLDHAGLERALRGLDGVIFS 84 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG--GGG-----GGCCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh--hhc-----cCCeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence 3468999999999999999999999999999999865432 111 136889999999999999999999999999
Q ss_pred CCCCCCCCCCch--------------------------------------h------------------hHHHHHHHHHH
Q 025065 87 ASPVIFLSDNPQ--------------------------------------E------------------WYSLAKTLAEE 110 (258)
Q Consensus 87 a~~~~~~~~~~~--------------------------------------~------------------~Y~~sK~~~e~ 110 (258)
|+.......++. . .|+.+|.++|.
T Consensus 85 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~ 164 (342)
T 2x4g_A 85 AGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDE 164 (342)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHH
T ss_pred CccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHH
Confidence 997542211111 2 59999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCc-CCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcCCCCCceEE
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFF-QPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYL 187 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~-~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~ 187 (258)
+++.++++ |++++++||+.+||+.. ... ...++..+..|. ..++ ..++|+|++|+|++++.+++++..+++|+
T Consensus 165 ~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~ 240 (342)
T 2x4g_A 165 QAREQARN-GLPVVIGIPGMVLGELDIGPT---TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYL 240 (342)
T ss_dssp HHHHHHHT-TCCEEEEEECEEECSCCSSCS---TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHhhc-CCcEEEEeCCceECCCCcccc---HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCCCceEE
Confidence 99998877 99999999999999986 321 334556666666 2225 77899999999999999998776555885
Q ss_pred Ee-CCCcCHHHHHHHHHHhCCCCC---CCCCC---------------c----------cCCCCccccCHHHH-HhcCC-C
Q 025065 188 LA-GSVAQHSDILKFLREHYPTLL---RSGKL---------------E----------EKYQPTIKVSQERA-KSLGI-N 236 (258)
Q Consensus 188 ~~-~~~~t~~e~~~~i~~~~~~~~---~~~~~---------------~----------~~~~~~~~~d~~k~-~~lg~-~ 236 (258)
++ ++ +|+.|+++.+.+.+|... +|.+. . ........+|++|+ +.||| +
T Consensus 241 v~~~~-~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~ 319 (342)
T 2x4g_A 241 LTGHN-LEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFS 319 (342)
T ss_dssp ECCEE-EEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCCCC
T ss_pred EcCCc-ccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCC
Confidence 55 56 999999999999987532 12110 0 01134677999999 67999 9
Q ss_pred ccchhHHHHHHHHHHHHcCCCC
Q 025065 237 FTPWEVGVRGCIESLMEKGFLS 258 (258)
Q Consensus 237 p~~~~~~l~~~~~~~~~~~~~~ 258 (258)
|++++++|+++++|+++++++.
T Consensus 320 p~~~~~~l~~~~~~~~~~g~~~ 341 (342)
T 2x4g_A 320 TTALDDTLLRAIDWFRDNGYFN 341 (342)
T ss_dssp CSCHHHHHHHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999874
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=252.79 Aligned_cols=244 Identities=16% Similarity=0.204 Sum_probs=187.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
||+||||||+||||++|+++|+++ |++|++++|+........+..+. ..+++++.+|+++++.+.++++++|+|||
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 81 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLAAKADAIVH 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc--cCCeEEEECCCCCHHHHHHHhhcCCEEEE
Confidence 579999999999999999999998 89999999976432222222221 25789999999999999999999999999
Q ss_pred cCCCCCCC--C--------------------------------------------------------------CCchhhH
Q 025065 86 TASPVIFL--S--------------------------------------------------------------DNPQEWY 101 (258)
Q Consensus 86 ~a~~~~~~--~--------------------------------------------------------------~~~~~~Y 101 (258)
+|+..... . ..+.+.|
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y 161 (348)
T 1oc2_A 82 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY 161 (348)
T ss_dssp CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred CCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCcc
Confidence 99864210 0 0011469
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-C-CCC---CCcceeeHHHHHHHHHHh
Q 025065 102 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-Q-SFA---FPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~-~~~---~~~~~i~v~D~a~~~~~~ 176 (258)
+.+|..+|.+++.++.+++++++++||+.+|||..... .....++..+..+. . .++ +.++|+|++|+|++++.+
T Consensus 162 ~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 240 (348)
T 1oc2_A 162 SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 240 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHH
Confidence 99999999999999888899999999999999986532 22344556666666 2 223 678999999999999999
Q ss_pred hcCCCCCceEEEe-CCCcCHHHHHHHHHHhCCCCCC-CCCCc--cCCCCccccCHHHH-HhcCCCc-cc-hhHHHHHHHH
Q 025065 177 LEVPKASGRYLLA-GSVAQHSDILKFLREHYPTLLR-SGKLE--EKYQPTIKVSQERA-KSLGINF-TP-WEVGVRGCIE 249 (258)
Q Consensus 177 ~~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~-~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~-~~~~l~~~~~ 249 (258)
++++..+++|+++ ++.+|+.|+++.+.+.+|.... ..... +.......+|++|+ +.|||+| ++ ++++|+++++
T Consensus 241 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~ 320 (348)
T 1oc2_A 241 LTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQ 320 (348)
T ss_dssp HHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHH
T ss_pred hhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 9876544588554 6789999999999999975421 11111 12234567899999 7799999 77 9999999999
Q ss_pred HHHHc
Q 025065 250 SLMEK 254 (258)
Q Consensus 250 ~~~~~ 254 (258)
|++++
T Consensus 321 ~~~~~ 325 (348)
T 1oc2_A 321 WYTDN 325 (348)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99864
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=254.57 Aligned_cols=243 Identities=23% Similarity=0.224 Sum_probs=189.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+++|+||||||+||||++|+++|+++| ++|++++|+...... .+. ...+++++.+|+++++.+.++++++|+||
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~l~----~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi 104 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI-NVP----DHPAVRFSETSITDDALLASLQDEYDYVF 104 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG-GSC----CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh-hcc----CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence 457899999999999999999999999 999999987654321 111 13578999999999999999999999999
Q ss_pred ecCCCCCC---------------------------C--------------------------CC-------CchhhHHHH
Q 025065 85 HTASPVIF---------------------------L--------------------------SD-------NPQEWYSLA 104 (258)
Q Consensus 85 h~a~~~~~---------------------------~--------------------------~~-------~~~~~Y~~s 104 (258)
|+|+.... . +. .+.+.|+.+
T Consensus 105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~s 184 (377)
T 2q1s_A 105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMS 184 (377)
T ss_dssp ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHH
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHH
Confidence 99985310 0 11 122579999
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCccccCCc---------CCC---CCccHHHHHHHHcCC--CCCC---CCcceeeHH
Q 025065 105 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFF---------QPI---LNFGAEVILNLINGD--QSFA---FPYIFVEIR 167 (258)
Q Consensus 105 K~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~---------~~~---~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~ 167 (258)
|.++|.+++.++.+++++++++||+.|||+.. ... ......++..+..+. ..++ +.++|+|++
T Consensus 185 K~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~ 264 (377)
T 2q1s_A 185 KIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVE 264 (377)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHH
Confidence 99999999999888899999999999999986 221 122445566666776 2333 678999999
Q ss_pred HHHHH-HHHhhcCCCCCceEEEe-CCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCC-ccccCHHHH-HhcCCCc-cch
Q 025065 168 DVVYA-HIRALEVPKASGRYLLA-GSVAQHSDILKFLREHYPTLLRSGKLE--EKYQP-TIKVSQERA-KSLGINF-TPW 240 (258)
Q Consensus 168 D~a~~-~~~~~~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~-~~~~d~~k~-~~lg~~p-~~~ 240 (258)
|+|++ ++.+++++. .|+|+++ ++.+|+.|+++.+.+.+|........+ ..... ...+|++|+ +.|||+| +++
T Consensus 265 Dva~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d~~k~~~~lG~~p~~~l 343 (377)
T 2q1s_A 265 DVANGLIACAADGTP-GGVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARRELGFSADVSI 343 (377)
T ss_dssp HHHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCCCHHHHHHHCCCCCCCH
T ss_pred HHHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccCHHHHHHHcCCCCCCCH
Confidence 99999 999998876 4588554 689999999999999987532111111 22234 678999999 7899999 899
Q ss_pred hHHHHHHHHHHHHc
Q 025065 241 EVGVRGCIESLMEK 254 (258)
Q Consensus 241 ~~~l~~~~~~~~~~ 254 (258)
+++|+++++|++++
T Consensus 344 ~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 344 DDGLRKTIEWTKAN 357 (377)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999864
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=259.17 Aligned_cols=247 Identities=13% Similarity=0.111 Sum_probs=186.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~V 83 (258)
|++|+||||||+||||++|+++|+++|++|++++|+...... ....+ ....++.++.+|+++++.+.+++++ +|+|
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 84 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS-LFETA-RVADGMQSEIGDIRDQNKLLESIREFQPEIV 84 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSC-HHHHT-TTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccch-hhHhh-ccCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence 356899999999999999999999999999999997655322 11111 0134789999999999999999876 8999
Q ss_pred EecCCCCCC--CCCC-----------------------------------------------------chhhHHHHHHHH
Q 025065 84 FHTASPVIF--LSDN-----------------------------------------------------PQEWYSLAKTLA 108 (258)
Q Consensus 84 ih~a~~~~~--~~~~-----------------------------------------------------~~~~Y~~sK~~~ 108 (258)
||+|+.... ...+ +.+.|+.+|.++
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 164 (357)
T 1rkx_A 85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCA 164 (357)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHH
T ss_pred EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHH
Confidence 999984210 0000 015799999999
Q ss_pred HHHHHHHHHHc---------CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHH
Q 025065 109 EEAAWKFAKEN---------GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 109 e~~~~~~~~~~---------~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~ 175 (258)
|.+++.++.++ +++++++||+.||||+..........++..+..|. ..++ ..++|+|++|+|++++.
T Consensus 165 e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~ 244 (357)
T 1rkx_A 165 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLL 244 (357)
T ss_dssp HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHH
Confidence 99999988754 99999999999999986433234455666666776 2232 67899999999999999
Q ss_pred hhcC----C-CCCceEEEe---CCCcCHHHHHHHHHHhCCCCC-CCCC--CccCCCCccccCHHHH-HhcCCCc-cchhH
Q 025065 176 ALEV----P-KASGRYLLA---GSVAQHSDILKFLREHYPTLL-RSGK--LEEKYQPTIKVSQERA-KSLGINF-TPWEV 242 (258)
Q Consensus 176 ~~~~----~-~~~~~~~~~---~~~~t~~e~~~~i~~~~~~~~-~~~~--~~~~~~~~~~~d~~k~-~~lg~~p-~~~~~ 242 (258)
++++ + ...++|+++ ++.+|+.|+++.+.+.+|... +... ..........+|++|+ +.|||+| +++++
T Consensus 245 ~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 324 (357)
T 1rkx_A 245 LAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNT 324 (357)
T ss_dssp HHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred HHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHHHHHHhCCCcCCcHHH
Confidence 9874 2 335588665 358999999999999987532 1111 0122345678999999 7799999 89999
Q ss_pred HHHHHHHHHHHc
Q 025065 243 GVRGCIESLMEK 254 (258)
Q Consensus 243 ~l~~~~~~~~~~ 254 (258)
+|+++++|++++
T Consensus 325 ~l~~~~~~~~~~ 336 (357)
T 1rkx_A 325 TLEYIVGWHKNW 336 (357)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999764
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=253.67 Aligned_cols=244 Identities=18% Similarity=0.237 Sum_probs=186.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHC---C---CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQR---G---YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
|+||||||+||||++|+++|+++ | ++|++++|.........+..+. ...++.++.+|+++++.+.+++.++|+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 79 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLARELRGVDA 79 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHhcCCCE
Confidence 47999999999999999999997 8 9999999975432222222221 135789999999999999999999999
Q ss_pred EEecCCCCCCC--CCCch---------------------------------------------------hhHHHHHHHHH
Q 025065 83 VFHTASPVIFL--SDNPQ---------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 83 Vih~a~~~~~~--~~~~~---------------------------------------------------~~Y~~sK~~~e 109 (258)
|||+|+..... ..++. +.|+.+|.++|
T Consensus 80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e 159 (337)
T 1r6d_A 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSD 159 (337)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHH
Confidence 99999964310 00110 46999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 110 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 110 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
.+++.++++++++++++||+++|||..... .....++.....+. ..++ +.++|+|++|+|++++.+++++..++
T Consensus 160 ~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~ 238 (337)
T 1r6d_A 160 LVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGE 238 (337)
T ss_dssp HHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCCCCC
Confidence 999999888899999999999999986532 22344566666665 2223 67899999999999999998765455
Q ss_pred eEEEe-CCCcCHHHHHHHHHHhCCCCC-CCCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 185 RYLLA-GSVAQHSDILKFLREHYPTLL-RSGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 185 ~~~~~-~~~~t~~e~~~~i~~~~~~~~-~~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+|+++ ++.+|+.|+++.+.+.+|... ...... ........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 239 ~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 314 (337)
T 1r6d_A 239 IYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314 (337)
T ss_dssp EEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence 88554 678999999999999987532 111111 11223456899999 7799999 89999999999999864
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=252.36 Aligned_cols=246 Identities=19% Similarity=0.170 Sum_probs=187.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vi 84 (258)
.+|+||||||+||||++|+++|+++|++|++++|+........+..+. ...+++++.+|+++++.+.+++++ +|+||
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVY 91 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence 468999999999999999999999999999999987553222222111 124689999999999999998875 79999
Q ss_pred ecCCCCCCC--CCCch----------------------------------------------------hhHHHHHHHHHH
Q 025065 85 HTASPVIFL--SDNPQ----------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 85 h~a~~~~~~--~~~~~----------------------------------------------------~~Y~~sK~~~e~ 110 (258)
|+|+..... ..++. +.|+.+|.++|.
T Consensus 92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~ 171 (335)
T 1rpn_A 92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW 171 (335)
T ss_dssp ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHH
Confidence 999974321 11111 369999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCcCCCC--CccHHHHHHHHcCC-CC--CC---CCcceeeHHHHHHHHHHhhcCCCC
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~g~-~~--~~---~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
+++.++++++++++++||+++|||+..... .....++..+..|. +. ++ +.++|+|++|+|++++.+++++.
T Consensus 172 ~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~- 250 (335)
T 1rpn_A 172 ITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK- 250 (335)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-
T ss_pred HHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC-
Confidence 999998888999999999999999765321 11233455556665 32 23 67899999999999999998865
Q ss_pred CceEE-EeCCCcCHHHHHHHHHHhCCCCC---CCCCC---ccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHH
Q 025065 183 SGRYL-LAGSVAQHSDILKFLREHYPTLL---RSGKL---EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 183 ~~~~~-~~~~~~t~~e~~~~i~~~~~~~~---~~~~~---~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
.++|+ ++++.+|+.|+++.+.+.+|... ++... .+.......+|++|+ +.|||+| ++++++|+++++|+++
T Consensus 251 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~ 330 (335)
T 1rpn_A 251 ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR 330 (335)
T ss_dssp CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHH
Confidence 47785 45788999999999999997531 11110 122334567899999 7799999 8999999999999986
Q ss_pred c
Q 025065 254 K 254 (258)
Q Consensus 254 ~ 254 (258)
+
T Consensus 331 ~ 331 (335)
T 1rpn_A 331 R 331 (335)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-36 Score=253.43 Aligned_cols=240 Identities=18% Similarity=0.131 Sum_probs=187.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
+||+||||||+||||++|+++|+++|++|++++|+...... .. ..+++++.+|+++++.+.++++++|+|||+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~-----~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~ 100 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--ED-----MFCDEFHLVDLRVMENCLKVTEGVDHVFNL 100 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GG-----GTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh--hc-----cCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence 46899999999999999999999999999999998654321 10 246789999999999999999999999999
Q ss_pred CCCCCCC---CCCch----------------------------------------------------------hhHHHHH
Q 025065 87 ASPVIFL---SDNPQ----------------------------------------------------------EWYSLAK 105 (258)
Q Consensus 87 a~~~~~~---~~~~~----------------------------------------------------------~~Y~~sK 105 (258)
|+..... ..++. +.|+.+|
T Consensus 101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK 180 (379)
T 2c5a_A 101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEK 180 (379)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHH
T ss_pred ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHH
Confidence 9975321 11111 2499999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC---ccHHHHHHHHcCCC---CCC---CCcceeeHHHHHHHHHHh
Q 025065 106 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN---FGAEVILNLINGDQ---SFA---FPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 106 ~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~g~~---~~~---~~~~~i~v~D~a~~~~~~ 176 (258)
.++|.+++.++++++++++++||+.+|||....... ....++..+..+.+ .++ +.++|+|++|+|++++.+
T Consensus 181 ~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~ 260 (379)
T 2c5a_A 181 LATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRL 260 (379)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHH
Confidence 999999999988889999999999999997654221 23445666656653 222 678999999999999999
Q ss_pred hcCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCCCCCCCCc-cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHH
Q 025065 177 LEVPKASGRY-LLAGSVAQHSDILKFLREHYPTLLRSGKLE-EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 252 (258)
Q Consensus 177 ~~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~-~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~ 252 (258)
++++ ..++| +++++.+|+.|+++.+.+.+|........+ ........+|++|+ +.|||+| ++++++|+++++|++
T Consensus 261 l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~ 339 (379)
T 2c5a_A 261 TKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIK 339 (379)
T ss_dssp HHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHH
T ss_pred hhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCCCcccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 9876 45677 555789999999999999987532111111 12234567899999 7799999 799999999999997
Q ss_pred Hc
Q 025065 253 EK 254 (258)
Q Consensus 253 ~~ 254 (258)
++
T Consensus 340 ~~ 341 (379)
T 2c5a_A 340 EQ 341 (379)
T ss_dssp HH
T ss_pred Hh
Confidence 64
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=256.61 Aligned_cols=236 Identities=16% Similarity=0.182 Sum_probs=181.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V 83 (258)
+|+||||||+||||++|+++|+++ |++|++++|+..... + ..+++++.+|+++++.+.++++ ++|+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~------~~~~~~~~~D~~d~~~~~~~~~~~~~d~v 72 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD---V------VNSGPFEVVNALDFNQIEHLVEVHKITDI 72 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH---H------HHSSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc---c------cCCCceEEecCCCHHHHHHHHhhcCCCEE
Confidence 468999999999999999999998 899999999765421 1 1246789999999999999998 89999
Q ss_pred EecCCCCCCC-CCCc----------------------------------------------------hhhHHHHHHHHHH
Q 025065 84 FHTASPVIFL-SDNP----------------------------------------------------QEWYSLAKTLAEE 110 (258)
Q Consensus 84 ih~a~~~~~~-~~~~----------------------------------------------------~~~Y~~sK~~~e~ 110 (258)
||+|+..... ..++ .+.|+.+|.++|.
T Consensus 73 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 152 (312)
T 2yy7_A 73 YLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGER 152 (312)
T ss_dssp EECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHH
T ss_pred EECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHH
Confidence 9999864210 0011 0469999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCcCCCCC---ccHHHHHHHH-cCC-CCCC---CCcceeeHHHHHHHHHHhhcCCCC
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFFQPILN---FGAEVILNLI-NGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~-~g~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
+++.++++++++++++||+++||+...+... .....+.+.+ .+. ..++ +.++|+|++|+|++++.+++++..
T Consensus 153 ~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 232 (312)
T 2yy7_A 153 WCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVE 232 (312)
T ss_dssp HHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGG
T ss_pred HHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccc
Confidence 9999988889999999999999986543321 1222333333 343 3333 789999999999999999988753
Q ss_pred ----CceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCc----cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHH
Q 025065 183 ----SGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE----EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLM 252 (258)
Q Consensus 183 ----~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~----~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~ 252 (258)
+++|+++++.+|+.|+++.+.+.+|...++.... ........+|++|+ +.|||+| ++++++|+++++|++
T Consensus 233 ~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 233 KIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp GCCCSSCEECCSEEECHHHHHHHHHTTCTTCEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred ccccCceEEeCCCccCHHHHHHHHHHHCCCCceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence 2588777789999999999999997433222111 01123457899999 7799999 899999999999984
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=250.24 Aligned_cols=236 Identities=19% Similarity=0.242 Sum_probs=184.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vi 84 (258)
++|+||||||+||||++|+++|+++|++|++++|+... .. + ++.++.+|+++++.+.+++++ +|+||
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 79 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----P-----NVEMISLDIMDSQRVKKVISDIKPDYIF 79 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----T-----TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----c-----eeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence 56899999999999999999999999999999997654 11 1 578999999999999999875 99999
Q ss_pred ecCCCCCC--CCCCch------------------------------------------------------hhHHHHHHHH
Q 025065 85 HTASPVIF--LSDNPQ------------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 85 h~a~~~~~--~~~~~~------------------------------------------------------~~Y~~sK~~~ 108 (258)
|+|+.... ...++. +.|+.+|.++
T Consensus 80 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 159 (321)
T 2pk3_A 80 HLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASV 159 (321)
T ss_dssp ECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHH
T ss_pred EcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHH
Confidence 99997431 111111 3699999999
Q ss_pred HHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHc---C--C--CCCC---CCcceeeHHHHHHHHHHhhc
Q 025065 109 EEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLIN---G--D--QSFA---FPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 109 e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~---g--~--~~~~---~~~~~i~v~D~a~~~~~~~~ 178 (258)
|.+++.++.++|++++++||+++|||+.... .....++..+.. | . ..++ +.++|+|++|+|++++.+++
T Consensus 160 E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~ 238 (321)
T 2pk3_A 160 GMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQ 238 (321)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHh
Confidence 9999999888899999999999999986542 223344444444 5 3 2233 57899999999999999998
Q ss_pred CCCCCceEEE-eCCCcCHHHHHHHHHHhCCCCC----CCCCCccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHH
Q 025065 179 VPKASGRYLL-AGSVAQHSDILKFLREHYPTLL----RSGKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESL 251 (258)
Q Consensus 179 ~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~----~~~~~~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~ 251 (258)
++..+++|++ +++.+|+.|+++.+.+.+|... .|....+.......+|++|+ +.|||+| ++++++|+++++|+
T Consensus 239 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~ 318 (321)
T 2pk3_A 239 YGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSY 318 (321)
T ss_dssp HCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred CCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHH
Confidence 7644558855 4678999999999999997531 11101122345678999999 7799999 79999999999999
Q ss_pred HHc
Q 025065 252 MEK 254 (258)
Q Consensus 252 ~~~ 254 (258)
+++
T Consensus 319 ~~~ 321 (321)
T 2pk3_A 319 RQA 321 (321)
T ss_dssp HTC
T ss_pred hcC
Confidence 853
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=249.26 Aligned_cols=221 Identities=12% Similarity=0.089 Sum_probs=175.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC-CcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG-CDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d~Vih 85 (258)
++|+||||| +||||++|+++|+++|++|++++|+.+.. ..+++++.+|+++++.+.+++++ +|+|||
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih 69 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVHLRPEILVY 69 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhcCCCCEEEE
Confidence 467899999 59999999999999999999999986542 24688999999999999999987 999999
Q ss_pred cCCCCCCCCCC-----c-------------------------------------------hhhHHHHHHHHHHHHHHHHH
Q 025065 86 TASPVIFLSDN-----P-------------------------------------------QEWYSLAKTLAEEAAWKFAK 117 (258)
Q Consensus 86 ~a~~~~~~~~~-----~-------------------------------------------~~~Y~~sK~~~e~~~~~~~~ 117 (258)
+|+........ . .+.|+.+|.++|++ +.+
T Consensus 70 ~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-- 146 (286)
T 3gpi_A 70 CVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-- 146 (286)
T ss_dssp CHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG--
T ss_pred eCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc--
Confidence 99753211100 0 05899999999998 553
Q ss_pred HcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCC--CC-CCcceeeHHHHHHHHHHhhcCC---CCCceEEEe-C
Q 025065 118 ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQS--FA-FPYIFVEIRDVVYAHIRALEVP---KASGRYLLA-G 190 (258)
Q Consensus 118 ~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~--~~-~~~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~-~ 190 (258)
++++++||+++|||... .++..+.. ... .+ ..++|+|++|+|++++.+++++ ...++|+++ +
T Consensus 147 ---~~~~ilR~~~v~G~~~~-------~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~ 215 (286)
T 3gpi_A 147 ---YSSTILRFSGIYGPGRL-------RMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDN 215 (286)
T ss_dssp ---SSEEEEEECEEEBTTBC-------HHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCS
T ss_pred ---CCeEEEecccccCCCch-------hHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCC
Confidence 89999999999999754 23444444 411 12 7789999999999999999984 455688655 6
Q ss_pred CCcCHHHHHHHHHHhCCCCCCCCCCccCCCCccccCHHHHHhcCCCc-c-chhHHHHHHHHHHHHc
Q 025065 191 SVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKVSQERAKSLGINF-T-PWEVGVRGCIESLMEK 254 (258)
Q Consensus 191 ~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p-~-~~~~~l~~~~~~~~~~ 254 (258)
+.+|+.|+++.+.+.+|... +....+.......+|++|++.|||+| + +++++|+++++|+..+
T Consensus 216 ~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~~ 280 (286)
T 3gpi_A 216 QPLPVHDLLRWLADRQGIAY-PAGATPPVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMREG 280 (286)
T ss_dssp CCEEHHHHHHHHHHHTTCCC-CCSCCCCBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC-
T ss_pred CCCCHHHHHHHHHHHcCCCC-CCCCCcccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhcc
Confidence 88999999999999997543 22222345667889999998899999 6 7999999999999653
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=248.55 Aligned_cols=242 Identities=19% Similarity=0.237 Sum_probs=181.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.+++|+|||||||||||++|+++|+++|++|++++|....... .+..+. ...+++++.+|+.+.. +.++|+||
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~-----~~~~d~vi 96 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR-NVEHWI-GHENFELINHDVVEPL-----YIEVDQIY 96 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-GTGGGT-TCTTEEEEECCTTSCC-----CCCCSEEE
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchh-hhhhhc-cCCceEEEeCccCChh-----hcCCCEEE
Confidence 3567899999999999999999999999999999997543221 111111 1246899999999864 56899999
Q ss_pred ecCCCCCCC--CCCch-------------------------------------------------------hhHHHHHHH
Q 025065 85 HTASPVIFL--SDNPQ-------------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 85 h~a~~~~~~--~~~~~-------------------------------------------------------~~Y~~sK~~ 107 (258)
|+|+..... ..++. +.|+.+|.+
T Consensus 97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~ 176 (343)
T 2b69_A 97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRV 176 (343)
T ss_dssp ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHH
T ss_pred ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHH
Confidence 999864321 11111 349999999
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC-CccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCC
Q 025065 108 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL-NFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 108 ~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+|.+++.++++.+++++++||+.+|||+..... .....++.....+. ..++ +.++|+|++|+|++++.+++.+.
T Consensus 177 ~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~ 256 (343)
T 2b69_A 177 AETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 256 (343)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC
Confidence 999999998888999999999999999765421 23345566666666 2233 67899999999999999998753
Q ss_pred CCceEE-EeCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 182 ASGRYL-LAGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 182 ~~~~~~-~~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
.++|+ ++++.+|+.|+++.+.+.+|........+ ........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 257 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 333 (343)
T 2b69_A 257 -SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 333 (343)
T ss_dssp -CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred -CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 56774 45788999999999999987532111111 22344677899999 7799999 99999999999999764
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=249.29 Aligned_cols=239 Identities=16% Similarity=0.204 Sum_probs=181.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 85 (258)
||+||||||+||||++|+++|+++|++|++++|+...... .+ ..+++++.+|+++++.+.++++ ++|+|||
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih 73 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED----AI---TEGAKFYNGDLRDKAFLRDVFTQENIEAVMH 73 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG----GS---CTTSEEEECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh----hc---CCCcEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 3689999999999999999999999999999987544211 11 1368899999999999999998 8999999
Q ss_pred cCCCCCCC--CCCc---------------------------------------------------hhhHHHHHHHHHHHH
Q 025065 86 TASPVIFL--SDNP---------------------------------------------------QEWYSLAKTLAEEAA 112 (258)
Q Consensus 86 ~a~~~~~~--~~~~---------------------------------------------------~~~Y~~sK~~~e~~~ 112 (258)
+|+..... ..++ .+.|+.+|.++|.++
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 153 (330)
T 2c20_A 74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKML 153 (330)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHH
Confidence 99874311 0000 057999999999999
Q ss_pred HHHHHHcCCcEEEEcCCccccCCcCCC-------CCccHHHHHHHHcCC-CC-----------CC-CCcceeeHHHHHHH
Q 025065 113 WKFAKENGIDLVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGD-QS-----------FA-FPYIFVEIRDVVYA 172 (258)
Q Consensus 113 ~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~g~-~~-----------~~-~~~~~i~v~D~a~~ 172 (258)
+.++++++++++++||+++||++.... .......+.+...+. +. -+ +.++|+|++|+|++
T Consensus 154 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a 233 (330)
T 2c20_A 154 HWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAA 233 (330)
T ss_dssp HHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHH
T ss_pred HHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHH
Confidence 999888899999999999999964211 112222333333332 21 12 56899999999999
Q ss_pred HHHhhcCCCC---CceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccCHHHH-HhcCCCc-c-chhH
Q 025065 173 HIRALEVPKA---SGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERA-KSLGINF-T-PWEV 242 (258)
Q Consensus 173 ~~~~~~~~~~---~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~-~~lg~~p-~-~~~~ 242 (258)
++.+++++.. .++|++ +++.+|+.|+++.+.+.+|.. .+.... ........+|++|+ +.|||+| + ++++
T Consensus 234 ~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~ 312 (330)
T 2c20_A 234 HFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHE-IPAEVAPRRAGDPARLVASSQKAKEKLGWDPRYVNVKT 312 (330)
T ss_dssp HHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSC-CCEEEECCCSSCCSEECBCCHHHHHHHCCCCSCCCHHH
T ss_pred HHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCC-CceeeCCCCCCcccccccCHHHHHHHhCCCCccCCHHH
Confidence 9999986432 458855 578999999999999999753 221111 22345678999999 7799999 6 9999
Q ss_pred HHHHHHHHHHHc
Q 025065 243 GVRGCIESLMEK 254 (258)
Q Consensus 243 ~l~~~~~~~~~~ 254 (258)
+|+++++|++++
T Consensus 313 ~l~~~~~~~~~~ 324 (330)
T 2c20_A 313 IIEHAWNWHQKQ 324 (330)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999999876
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=251.14 Aligned_cols=237 Identities=18% Similarity=0.176 Sum_probs=176.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc--cchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP--KTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
+++|+|||||||||||++|+++|+++|++|++++|+.... ....+.... ...+++++.+|++ ++|+|
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~----------~~d~v 73 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS----------DVRLV 73 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT----------TEEEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc----------cCCEE
Confidence 4578999999999999999999999999999999987621 111111110 0134455555554 67888
Q ss_pred EecCCCCCC-----CCCC-----------------------------------------------chhhHHHHHHHHHHH
Q 025065 84 FHTASPVIF-----LSDN-----------------------------------------------PQEWYSLAKTLAEEA 111 (258)
Q Consensus 84 ih~a~~~~~-----~~~~-----------------------------------------------~~~~Y~~sK~~~e~~ 111 (258)
||+|+.... .... +.+.|+.+|..+|.+
T Consensus 74 i~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 153 (321)
T 3vps_A 74 YHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMV 153 (321)
T ss_dssp EECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred EECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence 888876431 0000 015799999999999
Q ss_pred HHHHHHHcCC-cEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCce
Q 025065 112 AWKFAKENGI-DLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGR 185 (258)
Q Consensus 112 ~~~~~~~~~~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~ 185 (258)
++.++.++++ +++++||+++|||+.... .....++..+..+. ..++ ..++|+|++|+|++++.+++++.. |+
T Consensus 154 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g~ 231 (321)
T 3vps_A 154 AGAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-SV 231 (321)
T ss_dssp HHHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-SE
T ss_pred HHHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-Ce
Confidence 9999988999 999999999999987652 23455566666665 3333 778999999999999999998876 48
Q ss_pred EEEe-CCCcCHHHHHHHHHHhCCCCCCCCC--CccCCCCccccCHHHH-HhcCCCc--cchhHHHHHHHHHHHHcCC
Q 025065 186 YLLA-GSVAQHSDILKFLREHYPTLLRSGK--LEEKYQPTIKVSQERA-KSLGINF--TPWEVGVRGCIESLMEKGF 256 (258)
Q Consensus 186 ~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~--~~~~~~~~~~~d~~k~-~~lg~~p--~~~~~~l~~~~~~~~~~~~ 256 (258)
|+++ ++.+|+.|+++.+. .+|....... ..........+|++|+ +.|||+| ++++++|+++++|+++++.
T Consensus 232 ~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~ 307 (321)
T 3vps_A 232 VNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDL 307 (321)
T ss_dssp EEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred EEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence 8554 78899999999999 8875321111 1134556788999999 7799999 9999999999999998763
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=251.75 Aligned_cols=232 Identities=16% Similarity=0.060 Sum_probs=178.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDG 82 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~ 82 (258)
.|++|+|||||||||||++|+++|+++|+ +.... ...++++.+|++|++.+.+++++ +|+
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~ 64 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------------WVFVSSKDADLTDTAQTRALFEKVQPTH 64 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------------EEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------------ccccCceecccCCHHHHHHHHhhcCCCE
Confidence 35678999999999999999999999998 11110 02344567999999999999986 999
Q ss_pred EEecCCCCCC---CCCCch-------------------------------------------------------h-hHHH
Q 025065 83 VFHTASPVIF---LSDNPQ-------------------------------------------------------E-WYSL 103 (258)
Q Consensus 83 Vih~a~~~~~---~~~~~~-------------------------------------------------------~-~Y~~ 103 (258)
|||+|+..+. ...++. + +|+.
T Consensus 65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~ 144 (319)
T 4b8w_A 65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSY 144 (319)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHH
T ss_pred EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHH
Confidence 9999998541 112211 1 5999
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC---CccHHHHHH----HHcCC--CCCC---CCcceeeHHHHHH
Q 025065 104 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILN----LINGD--QSFA---FPYIFVEIRDVVY 171 (258)
Q Consensus 104 sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~----~~~g~--~~~~---~~~~~i~v~D~a~ 171 (258)
+|.++|++++.++++++++++++||+++|||+..... ...+.++.+ +..|. .+++ +.++|+|++|+|+
T Consensus 145 sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ 224 (319)
T 4b8w_A 145 AKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQ 224 (319)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHH
Confidence 9999999999999889999999999999999875421 223444555 55665 2333 7789999999999
Q ss_pred HHHHhhcCCCC--CceE-EEeCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHH
Q 025065 172 AHIRALEVPKA--SGRY-LLAGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGV 244 (258)
Q Consensus 172 ~~~~~~~~~~~--~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l 244 (258)
+++.+++++.. .++| +++++.+|+.|+++.+.+.+|......... ........+|++|+ +.|||+| ++++++|
T Consensus 225 a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l 304 (319)
T 4b8w_A 225 LFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAV 304 (319)
T ss_dssp HHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCCCCHHHHH
T ss_pred HHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHHHHHhcCCCCCCCHHHHH
Confidence 99999987543 3378 556899999999999999997532111111 23445668999999 7799999 9999999
Q ss_pred HHHHHHHHHc
Q 025065 245 RGCIESLMEK 254 (258)
Q Consensus 245 ~~~~~~~~~~ 254 (258)
+++++|++++
T Consensus 305 ~~~~~~~~~~ 314 (319)
T 4b8w_A 305 KETCAWFTDN 314 (319)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHH
Confidence 9999999976
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=249.12 Aligned_cols=237 Identities=21% Similarity=0.245 Sum_probs=181.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~ 86 (258)
|+||||||+||||++|+++|+++|++|++++|...... ..+ ..++.++.+|+++++.+.++++ ++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 73 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR-ENV------PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQ 73 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG-GGS------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch-hhc------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 47999999999999999999999999999988543221 111 1357789999999999999887 79999999
Q ss_pred CCCCCC--CCCCc-----------------------------------------------------hhhHHHHHHHHHHH
Q 025065 87 ASPVIF--LSDNP-----------------------------------------------------QEWYSLAKTLAEEA 111 (258)
Q Consensus 87 a~~~~~--~~~~~-----------------------------------------------------~~~Y~~sK~~~e~~ 111 (258)
|+.... +..++ .+.|+.+|.++|.+
T Consensus 74 a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~ 153 (311)
T 2p5y_A 74 AAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHY 153 (311)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence 986421 00000 13699999999999
Q ss_pred HHHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC--CCC-----C---CCcceeeHHHHHHHHHHhhcC
Q 025065 112 AWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD--QSF-----A---FPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 112 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~--~~~-----~---~~~~~i~v~D~a~~~~~~~~~ 179 (258)
++.++++++++++++||+++|||....... ....++.++..+. ..+ + +.++|+|++|+|++++.++++
T Consensus 154 ~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 233 (311)
T 2p5y_A 154 LSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS 233 (311)
T ss_dssp HHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC
Confidence 999988889999999999999997654321 2334455555665 233 3 678999999999999999987
Q ss_pred CCCCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 180 PKASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 180 ~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+ +++|++ +++.+|+.|+++.+.+.+|........+ ........+|++|+++|||+| ++++++|+++++|++++
T Consensus 234 ~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 310 (311)
T 2p5y_A 234 L--EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRGA 310 (311)
T ss_dssp C--CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTCCSBCCBCCHHHHTTTCCCSSCHHHHHHHHHHHHHTC
T ss_pred C--CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccchhhccCCHHHHHHCCCCCCCCHHHHHHHHHHHHHhh
Confidence 5 558855 5788999999999999987532111111 223356789999993399999 99999999999999764
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=248.30 Aligned_cols=242 Identities=18% Similarity=0.258 Sum_probs=183.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc-ccHHHHhCCCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAVDGCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~Vih~ 86 (258)
|+|||||||||||++|+++|+++ |++|++++|+...... +.. ..+++++.+|+++. +.+.++++++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~----~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~ 74 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR--FLN----HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL 74 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG--GTT----CTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH--hhc----CCCeEEEeccccCcHHHHHhhccCCCEEEEc
Confidence 47999999999999999999998 8999999997643211 111 24789999999985 4678888899999999
Q ss_pred CCCCCCC--CCCc---------------------------------------------------------hhhHHHHHHH
Q 025065 87 ASPVIFL--SDNP---------------------------------------------------------QEWYSLAKTL 107 (258)
Q Consensus 87 a~~~~~~--~~~~---------------------------------------------------------~~~Y~~sK~~ 107 (258)
|+..... ..++ .+.|+.+|..
T Consensus 75 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~ 154 (345)
T 2bll_A 75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQL 154 (345)
T ss_dssp BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHH
T ss_pred ccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHH
Confidence 9864310 0000 0169999999
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCccccCCcCCC-------CCccHHHHHHHHcCCC--CCC---CCcceeeHHHHHHHHHH
Q 025065 108 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-------LNFGAEVILNLINGDQ--SFA---FPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 108 ~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~g~~--~~~---~~~~~i~v~D~a~~~~~ 175 (258)
+|.+++.++++++++++++||+.||||+.... ......++..+..|.+ .++ +.++|+|++|+|++++.
T Consensus 155 ~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 234 (345)
T 2bll_A 155 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYR 234 (345)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHH
Confidence 99999999888899999999999999986531 1123445666666662 233 67899999999999999
Q ss_pred hhcCCC--CCc-eEEEe-CC-CcCHHHHHHHHHHhCCCCC----CCCCCc-------------cCCCCccccCHHHH-Hh
Q 025065 176 ALEVPK--ASG-RYLLA-GS-VAQHSDILKFLREHYPTLL----RSGKLE-------------EKYQPTIKVSQERA-KS 232 (258)
Q Consensus 176 ~~~~~~--~~~-~~~~~-~~-~~t~~e~~~~i~~~~~~~~----~~~~~~-------------~~~~~~~~~d~~k~-~~ 232 (258)
+++++. ..| +|+++ ++ .+|+.|+++.+.+.+|... .|.... ........+|++|+ +.
T Consensus 235 ~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 314 (345)
T 2bll_A 235 IIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRC 314 (345)
T ss_dssp HHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHH
T ss_pred HHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHHHHHHh
Confidence 998764 334 78666 44 7999999999999886432 222110 01234567899999 77
Q ss_pred cCCCc-cchhHHHHHHHHHHHHcCC
Q 025065 233 LGINF-TPWEVGVRGCIESLMEKGF 256 (258)
Q Consensus 233 lg~~p-~~~~~~l~~~~~~~~~~~~ 256 (258)
|||+| ++++++|+++++|++++.-
T Consensus 315 lG~~p~~~l~~~l~~~~~~~~~~~~ 339 (345)
T 2bll_A 315 LDWEPKIDMQETIDETLDFFLRTVD 339 (345)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred cCCCccccHHHHHHHHHHHHHHcCC
Confidence 99999 8999999999999987643
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=247.89 Aligned_cols=239 Identities=20% Similarity=0.203 Sum_probs=180.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~ 80 (258)
++|+||||||+||||++|+++|+++| ++|++++|+....... .+ .++. +.+|+++.+.+.++++ ++
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---~~----~~~~-~~~d~~~~~~~~~~~~~~~~~~~ 116 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV---NL----VDLN-IADYMDKEDFLIQIMAGEEFGDV 116 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGG---GT----TTSC-CSEEEEHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhh---cc----cCce-EeeecCcHHHHHHHHhhcccCCC
Confidence 45889999999999999999999999 9999999876442111 11 1223 6789999999999887 59
Q ss_pred cEEEecCCCCCCCCCCch--------------------------------------------------hhHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 81 d~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~~e~ 110 (258)
|+|||+|+.......++. +.|+.+|.++|.
T Consensus 117 d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 196 (357)
T 2x6t_A 117 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDE 196 (357)
T ss_dssp CEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHH
T ss_pred CEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHH
Confidence 999999997654222221 379999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCcCCC---CCccHHHHHHHHcCCC--CCC---C-CcceeeHHHHHHHHHHhhcCCC
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGDQ--SFA---F-PYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~g~~--~~~---~-~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+++.++.+++++++++||+.||||+.... ......++..+..+.. .++ + .++|+|++|+|++++.+++++.
T Consensus 197 ~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~ 276 (357)
T 2x6t_A 197 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV 276 (357)
T ss_dssp HHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC
Confidence 99999888899999999999999976532 1223445566666662 233 5 7899999999999999998876
Q ss_pred CCceEEE-eCCCcCHHHHHHHHHHhCCCCCCC-----CCCccCCCCccccCHHHHHhcCC-Cc-cchhHHHHHHHHHHHH
Q 025065 182 ASGRYLL-AGSVAQHSDILKFLREHYPTLLRS-----GKLEEKYQPTIKVSQERAKSLGI-NF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 182 ~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~d~~k~~~lg~-~p-~~~~~~l~~~~~~~~~ 253 (258)
.++|++ +++.+|+.|+++.+.+.+|...++ ............+|++|+++||| .| ++++++|+++++|+++
T Consensus 277 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~~~~~~~ 355 (357)
T 2x6t_A 277 -SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNR 355 (357)
T ss_dssp -CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCCHHHHHHHHHHHHC-
T ss_pred -CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHHHHHcCCCCCCCCHHHHHHHHHHHHhh
Confidence 568855 578999999999999998754111 11011223456789999966999 67 9999999999999975
Q ss_pred c
Q 025065 254 K 254 (258)
Q Consensus 254 ~ 254 (258)
+
T Consensus 356 ~ 356 (357)
T 2x6t_A 356 D 356 (357)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=248.48 Aligned_cols=246 Identities=16% Similarity=0.176 Sum_probs=182.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih 85 (258)
||+||||||+||||++|+++|+++|++|++++|...+........+.. ..++.++.+|+++++.+.+++++ +|+|||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFH 79 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEEE
Confidence 368999999999999999999999999999998643221111111111 13588999999999999999987 999999
Q ss_pred cCCCCCCC--CCC-------------------------------------------------------------------
Q 025065 86 TASPVIFL--SDN------------------------------------------------------------------- 96 (258)
Q Consensus 86 ~a~~~~~~--~~~------------------------------------------------------------------- 96 (258)
+|+..... ..+
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~ 159 (347)
T 1orr_A 80 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL 159 (347)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred CCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCC
Confidence 99863210 000
Q ss_pred -chhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC--CccHHHHHHHHcCC-------CCCC---CCcce
Q 025065 97 -PQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL--NFGAEVILNLINGD-------QSFA---FPYIF 163 (258)
Q Consensus 97 -~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~g~-------~~~~---~~~~~ 163 (258)
+.+.|+.+|.++|.+++.++.++|++++++||+.|||+...... .....++.+...+. ..++ +.++|
T Consensus 160 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 239 (347)
T 1orr_A 160 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 239 (347)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEee
Confidence 11469999999999999998888999999999999999764321 12233444444332 1122 67899
Q ss_pred eeHHHHHHHHHHhhcCC-CCCc-eEEEeCC---CcCHHHHHHHHHHhCCCCCCCCCC--ccCCCCccccCHHHH-HhcCC
Q 025065 164 VEIRDVVYAHIRALEVP-KASG-RYLLAGS---VAQHSDILKFLREHYPTLLRSGKL--EEKYQPTIKVSQERA-KSLGI 235 (258)
Q Consensus 164 i~v~D~a~~~~~~~~~~-~~~~-~~~~~~~---~~t~~e~~~~i~~~~~~~~~~~~~--~~~~~~~~~~d~~k~-~~lg~ 235 (258)
+|++|+|++++.+++++ ...| +|++++. ++|+.|+++.+.+.+|........ .........+|++|+ +.|||
T Consensus 240 i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 319 (347)
T 1orr_A 240 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDW 319 (347)
T ss_dssp EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHHCC
T ss_pred EEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCCCcceeecCHHHHHHHHCC
Confidence 99999999999999862 2345 8876643 499999999999998753211111 122334567999999 77999
Q ss_pred Cc-cchhHHHHHHHHHHHHc
Q 025065 236 NF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 236 ~p-~~~~~~l~~~~~~~~~~ 254 (258)
+| ++++++|+++++|++++
T Consensus 320 ~p~~~~~e~l~~~~~~~~~~ 339 (347)
T 1orr_A 320 SPKVSAKDGVQKMYDWTSSI 339 (347)
T ss_dssp CCCSCHHHHHHHHHHHHHHC
T ss_pred CccCCHHHHHHHHHHHHHHH
Confidence 99 89999999999999875
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-35 Score=246.87 Aligned_cols=245 Identities=16% Similarity=0.155 Sum_probs=183.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-----cCCcEEEEEccCCCcccHHHHhCC--Cc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-----ATERLHLFKANLLEEGSFDSAVDG--CD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~--~d 81 (258)
|+||||||+||||++|+++|+++|++|++++|+........+..+.. ...++.++.+|+++++.+.+++++ +|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 68999999999999999999999999999999865422111222110 124688999999999999998875 79
Q ss_pred EEEecCCCCCCC--CCC------------------------------------------------------chhhHHHHH
Q 025065 82 GVFHTASPVIFL--SDN------------------------------------------------------PQEWYSLAK 105 (258)
Q Consensus 82 ~Vih~a~~~~~~--~~~------------------------------------------------------~~~~Y~~sK 105 (258)
+|||+|+..... ..+ +.+.|+.+|
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK 184 (375)
T 1t2a_A 105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK 184 (375)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHH
Confidence 999999864210 000 014799999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC-CC--CC---CCcceeeHHHHHHHHHHhh
Q 025065 106 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 106 ~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~-~~--~~---~~~~~i~v~D~a~~~~~~~ 177 (258)
.++|.+++.++.+++++++++||+++|||....... ....++.++..|. .. ++ +.++|+|++|+|++++.++
T Consensus 185 ~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~ 264 (375)
T 1t2a_A 185 LYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLML 264 (375)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHH
Confidence 999999999998889999999999999997543211 1223444555665 22 23 6789999999999999999
Q ss_pred cCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCCC------CCCC------------C-----ccCCCCccccCHHHH-Hh
Q 025065 178 EVPKASGRY-LLAGSVAQHSDILKFLREHYPTLL------RSGK------------L-----EEKYQPTIKVSQERA-KS 232 (258)
Q Consensus 178 ~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~------~~~~------------~-----~~~~~~~~~~d~~k~-~~ 232 (258)
+++. .++| +++++.+|+.|+++.+.+.+|... +|.+ . .+.......+|++|+ +.
T Consensus 265 ~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 343 (375)
T 1t2a_A 265 QNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQK 343 (375)
T ss_dssp HSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHH
T ss_pred hcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCCHHHHHHh
Confidence 8765 4677 555789999999999999997531 1111 0 012233466899999 77
Q ss_pred cCCCc-cchhHHHHHHHHHHHHc
Q 025065 233 LGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 233 lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
|||+| ++++++|+++++|+++.
T Consensus 344 lG~~p~~~l~e~l~~~~~~~~~~ 366 (375)
T 1t2a_A 344 LNWKPRVAFDELVREMVHADVEL 366 (375)
T ss_dssp HCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cCCCccCCHHHHHHHHHHHHHHh
Confidence 99999 89999999999999764
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-35 Score=246.49 Aligned_cols=246 Identities=17% Similarity=0.185 Sum_probs=179.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC----cCCcEEEEEccCCCcccHHHHhCC--Cc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG----ATERLHLFKANLLEEGSFDSAVDG--CD 81 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~--~d 81 (258)
||+||||||+||||++|+++|+++|++|++++|+........+..+.. ...++.++.+|+++++++.+++++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999999765421111211110 124688999999999999998875 79
Q ss_pred EEEecCCCCCCC--CCCch------------------------------------------------------hhHHHHH
Q 025065 82 GVFHTASPVIFL--SDNPQ------------------------------------------------------EWYSLAK 105 (258)
Q Consensus 82 ~Vih~a~~~~~~--~~~~~------------------------------------------------------~~Y~~sK 105 (258)
+|||+|+..... ..++. +.|+.+|
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK 160 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence 999999974321 11111 4699999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC-CC--CC---CCcceeeHHHHHHHHHHhh
Q 025065 106 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 106 ~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~-~~--~~---~~~~~i~v~D~a~~~~~~~ 177 (258)
.++|.+++.++.+++++++++|++++|||+...... ....++..+..|. .. ++ +.++|+|++|+|++++.++
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~ 240 (372)
T 1db3_A 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (372)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHH
Confidence 999999999998889999999999999997543211 1233444555665 22 23 6789999999999999999
Q ss_pred cCCCCCceEE-EeCCCcCHHHHHHHHHHhCCCCC------CCCC---------------------------CccCCCCcc
Q 025065 178 EVPKASGRYL-LAGSVAQHSDILKFLREHYPTLL------RSGK---------------------------LEEKYQPTI 223 (258)
Q Consensus 178 ~~~~~~~~~~-~~~~~~t~~e~~~~i~~~~~~~~------~~~~---------------------------~~~~~~~~~ 223 (258)
+++. .++|+ ++++.+|+.|+++.+.+.+|... +|.+ ..+......
T Consensus 241 ~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (372)
T 1db3_A 241 QQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETL 319 (372)
T ss_dssp SSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCC
T ss_pred hcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCCCchhhh
Confidence 8765 46785 55788999999999999987421 1110 001122345
Q ss_pred ccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 224 KVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 224 ~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
.+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 320 ~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 352 (372)
T 1db3_A 320 LGDPTKAHEKLGWKPEITLREMVSEMVANDLEA 352 (372)
T ss_dssp CBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence 6899999 7799999 99999999999999764
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=246.61 Aligned_cols=227 Identities=18% Similarity=0.188 Sum_probs=175.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 84 (258)
++|+||||||+||||++|+++|+++|++|++++|+. .+|+++.+.+.++++ ++|+||
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~~~d~vi 60 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASERIDQVY 60 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhcCCCEEE
Confidence 457999999999999999999999999999987642 268999988998888 899999
Q ss_pred ecCCCCCC---CCCCch--------------------------------------------------------hhHHHHH
Q 025065 85 HTASPVIF---LSDNPQ--------------------------------------------------------EWYSLAK 105 (258)
Q Consensus 85 h~a~~~~~---~~~~~~--------------------------------------------------------~~Y~~sK 105 (258)
|+|+.... ...++. +.|+.+|
T Consensus 61 h~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 140 (321)
T 1e6u_A 61 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK 140 (321)
T ss_dssp ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHH
T ss_pred EcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHH
Confidence 99986531 000000 2799999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC---CccHHHHHHHHc----C-C--CCCC---CCcceeeHHHHHHH
Q 025065 106 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLIN----G-D--QSFA---FPYIFVEIRDVVYA 172 (258)
Q Consensus 106 ~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~----g-~--~~~~---~~~~~i~v~D~a~~ 172 (258)
.++|.+++.++++++++++++||+.+|||+..... .....++..+.. | . .+++ +.++|+|++|+|++
T Consensus 141 ~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~ 220 (321)
T 1e6u_A 141 IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA 220 (321)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHH
Confidence 99999999998888999999999999999865321 223444554443 3 3 2233 67899999999999
Q ss_pred HHHhhcCCCC---------CceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCC--CccCCCCccccCHHHHHhcCCCc-cc
Q 025065 173 HIRALEVPKA---------SGRYLL-AGSVAQHSDILKFLREHYPTLLRSGK--LEEKYQPTIKVSQERAKSLGINF-TP 239 (258)
Q Consensus 173 ~~~~~~~~~~---------~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~--~~~~~~~~~~~d~~k~~~lg~~p-~~ 239 (258)
++.+++++.. .++|++ +++.+|+.|+++.+.+.+|....... ..+.......+|++|++.|||+| ++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~ 300 (321)
T 1e6u_A 221 SIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEIS 300 (321)
T ss_dssp HHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHHTTCCCCCC
T ss_pred HHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcccccCCHHHHHhcCCccCCc
Confidence 9999988754 358855 57889999999999999875321111 11223456789999993399999 89
Q ss_pred hhHHHHHHHHHHHHc
Q 025065 240 WEVGVRGCIESLMEK 254 (258)
Q Consensus 240 ~~~~l~~~~~~~~~~ 254 (258)
++++|+++++|++++
T Consensus 301 ~~~~l~~~~~~~~~~ 315 (321)
T 1e6u_A 301 LEAGLASTYQWFLEN 315 (321)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999875
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=243.17 Aligned_cols=236 Identities=19% Similarity=0.184 Sum_probs=170.4
Q ss_pred EEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC-----CcEE
Q 025065 10 VVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG-----CDGV 83 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~d~V 83 (258)
+|||||||||||++|+++|+++| ++|++++|+........+. ++. +.+|+++.+.+.+++++ +|+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v 72 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-------DLN-IADYMDKEDFLIQIMAGEEFGDVEAI 72 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-------TSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC-------cce-eccccccHHHHHHHHhccccCCCcEE
Confidence 48999999999999999999999 9999999876543111111 122 67899999999998875 9999
Q ss_pred EecCCCCCCCCCCch--------------------------------------------------hhHHHHHHHHHHHHH
Q 025065 84 FHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTLAEEAAW 113 (258)
Q Consensus 84 ih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~ 113 (258)
||+|+.......++. +.|+.+|.++|.+++
T Consensus 73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~ 152 (310)
T 1eq2_A 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVR 152 (310)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHH
T ss_pred EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence 999997644222221 369999999999999
Q ss_pred HHHHHcCCcEEEEcCCccccCCcCCC---CCccHHHHHHHHcCC--CCCC---C-CcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 114 KFAKENGIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGD--QSFA---F-PYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 114 ~~~~~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~g~--~~~~---~-~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
.++++++++++++||+++|||+.... ......++..+..+. ..++ + .++|+|++|+|++++.+++++. .+
T Consensus 153 ~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-~~ 231 (310)
T 1eq2_A 153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SG 231 (310)
T ss_dssp HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CE
T ss_pred HHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC-CC
Confidence 98888899999999999999986521 122344566666666 2333 6 8899999999999999998876 66
Q ss_pred eEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCCc-----cCCCCccccCHHHHHhcCC-Cc-cchhHHHHHHHHHHHHc
Q 025065 185 RYLL-AGSVAQHSDILKFLREHYPTLLRSGKLE-----EKYQPTIKVSQERAKSLGI-NF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 185 ~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~d~~k~~~lg~-~p-~~~~~~l~~~~~~~~~~ 254 (258)
+|++ +++.+|+.|+++.+.+.+|...++.... ........+|++|+++||| +| ++++++|+++++|++++
T Consensus 232 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 232 IFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp EEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHTC--
T ss_pred eEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHhcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 8865 5789999999999999987541111111 1223456789999966999 78 99999999999999754
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=247.45 Aligned_cols=245 Identities=30% Similarity=0.429 Sum_probs=185.9
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcc-ccC-cCCcEEEE-EccCCCcccHHHHhCCCc
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRE-LDG-ATERLHLF-KANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~-~~~~~~~~-~~Dl~~~~~~~~~~~~~d 81 (258)
.+++|+||||||+||||++|+++|+++|++|++++|+..... .+.. +.. ...+++++ .+|+++++.+.++++++|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 85 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLA--NLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA 85 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHH--HHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCC
Confidence 456789999999999999999999999999999999753321 1110 000 01468888 899999999999999999
Q ss_pred EEEecCCCCCCCCCCch---------------------------------------------------------------
Q 025065 82 GVFHTASPVIFLSDNPQ--------------------------------------------------------------- 98 (258)
Q Consensus 82 ~Vih~a~~~~~~~~~~~--------------------------------------------------------------- 98 (258)
+|||+|+...... ++.
T Consensus 86 ~vih~A~~~~~~~-~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 164 (342)
T 1y1p_A 86 GVAHIASVVSFSN-KYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL 164 (342)
T ss_dssp EEEECCCCCSCCS-CHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred EEEEeCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccc
Confidence 9999998643211 111
Q ss_pred ---------hhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCCCC--CC--CCc
Q 025065 99 ---------EWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQS--FA--FPY 161 (258)
Q Consensus 99 ---------~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~--~~--~~~ 161 (258)
+.|+.+|.++|.+++.+++++ +++++++||+++||+....... ....++..+..|.+. ++ +.+
T Consensus 165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T 1y1p_A 165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQ 244 (342)
T ss_dssp CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSE
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcC
Confidence 249999999999999988775 7899999999999997654321 345566666676622 22 578
Q ss_pred ceeeHHHHHHHHHHhhcCCCCCc-eEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCccCCCCccccCHHHH-HhcCC---C
Q 025065 162 IFVEIRDVVYAHIRALEVPKASG-RYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKVSQERA-KSLGI---N 236 (258)
Q Consensus 162 ~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~---~ 236 (258)
+|+|++|+|++++.+++++...| .++++++.+|+.|+++.+.+.+|...++............+|++|+ +.||| .
T Consensus 245 ~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~~~~ 324 (342)
T 1y1p_A 245 YYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRP 324 (342)
T ss_dssp EEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHHTTCC
T ss_pred CEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCccccccccCChHHHHHHHhhcccC
Confidence 99999999999999998765555 5667788899999999999999864333322222223467899999 66877 5
Q ss_pred c-cchhHHHHHHHHHHH
Q 025065 237 F-TPWEVGVRGCIESLM 252 (258)
Q Consensus 237 p-~~~~~~l~~~~~~~~ 252 (258)
+ ++++++|+++++|++
T Consensus 325 ~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 325 GWRSIEESIKDLVGSET 341 (342)
T ss_dssp SCCCHHHHHHHHHCCSC
T ss_pred CcCCHHHHHHHHHHHhh
Confidence 6 899999999999874
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=242.15 Aligned_cols=246 Identities=17% Similarity=0.156 Sum_probs=184.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vi 84 (258)
++|+||||||+||||++|+++|+++|++|++++|+........+..+. ...+++++.+|++|++++.+++++ +|+||
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 80 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKVQPDEVY 80 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence 468999999999999999999999999999999987553222222211 124689999999999999998875 69999
Q ss_pred ecCCCCCCC--CCCch----------------------------------------------------hhHHHHHHHHHH
Q 025065 85 HTASPVIFL--SDNPQ----------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 85 h~a~~~~~~--~~~~~----------------------------------------------------~~Y~~sK~~~e~ 110 (258)
|+|+..... ..++. +.|+.+|.++|.
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 160 (345)
T 2z1m_A 81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHW 160 (345)
T ss_dssp ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence 999974210 11111 579999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC-C--CCC---CCcceeeHHHHHHHHHHhhcCCCC
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-Q--SFA---FPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~-~--~~~---~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
+++.++.+++++++++|++++|||+...... .....+.++..|. . .++ ..++|+|++|+|++++.+++++.
T Consensus 161 ~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~- 239 (345)
T 2z1m_A 161 ITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE- 239 (345)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS-
T ss_pred HHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC-
Confidence 9999998889999999999999997543211 1122334445554 2 223 56889999999999999998765
Q ss_pred CceE-EEeCCCcCHHHHHHHHHHhCCCCC------CCCC-------------C----ccCCCCccccCHHHH-HhcCCCc
Q 025065 183 SGRY-LLAGSVAQHSDILKFLREHYPTLL------RSGK-------------L----EEKYQPTIKVSQERA-KSLGINF 237 (258)
Q Consensus 183 ~~~~-~~~~~~~t~~e~~~~i~~~~~~~~------~~~~-------------~----~~~~~~~~~~d~~k~-~~lg~~p 237 (258)
.+.| +++++.+|+.|+++.+.+.+|... +|.+ . .+.......+|++|+ +.|||+|
T Consensus 240 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p 319 (345)
T 2z1m_A 240 PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKP 319 (345)
T ss_dssp CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCC
T ss_pred CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcCCcc
Confidence 4677 456789999999999999997531 1111 0 012234456799999 7799999
Q ss_pred -cchhHHHHHHHHHHHHc
Q 025065 238 -TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 238 -~~~~~~l~~~~~~~~~~ 254 (258)
++++++|+++++|++++
T Consensus 320 ~~~~~~~l~~~~~~~~~~ 337 (345)
T 2z1m_A 320 RTTFDELVEIMMEADLKR 337 (345)
T ss_dssp CSCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 99999999999999764
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=242.62 Aligned_cols=244 Identities=17% Similarity=0.263 Sum_probs=184.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEe
Q 025065 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 85 (258)
||||||||+||||++|+++|+++ |++|++++|+........+..+.. ..+++++.+|+++++.+.++++ ++|+|||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE-SNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhc-CCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 37999999999999999999998 799999998753222222222211 3578999999999999999997 8999999
Q ss_pred cCCCCCC------------------------------C---------------------C--------------------
Q 025065 86 TASPVIF------------------------------L---------------------S-------------------- 94 (258)
Q Consensus 86 ~a~~~~~------------------------------~---------------------~-------------------- 94 (258)
+|+.... . .
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~ 159 (361)
T 1kew_A 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence 9986320 0 0
Q ss_pred -CCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHH
Q 025065 95 -DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRD 168 (258)
Q Consensus 95 -~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D 168 (258)
..+.+.|+.+|.++|.+++.++.+++++++++||+.||||..... .....++..+..+. +.++ +.++|+|++|
T Consensus 160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 238 (361)
T 1kew_A 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHH
Confidence 011257999999999999999888899999999999999986532 22344556666665 3333 6789999999
Q ss_pred HHHHHHHhhcCCCCCceEEEe-CCCcCHHHHHHHHHHhCCCCC-C--CC-----CCc--cCCCCccccCHHHH-HhcCCC
Q 025065 169 VVYAHIRALEVPKASGRYLLA-GSVAQHSDILKFLREHYPTLL-R--SG-----KLE--EKYQPTIKVSQERA-KSLGIN 236 (258)
Q Consensus 169 ~a~~~~~~~~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~-~--~~-----~~~--~~~~~~~~~d~~k~-~~lg~~ 236 (258)
+|++++.+++++..+++|+++ ++.+|+.|+++.+.+.+|... . |. ... ........+|++|+ +.|||+
T Consensus 239 va~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 318 (361)
T 1kew_A 239 HARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWK 318 (361)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHHHHhCCC
Confidence 999999999876544488555 678999999999999875321 0 10 000 11224567899999 779999
Q ss_pred c-cchhHHHHHHHHHHHHc
Q 025065 237 F-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 237 p-~~~~~~l~~~~~~~~~~ 254 (258)
| ++++++|+++++|++++
T Consensus 319 p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 319 PLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp CSCCHHHHHHHHHHHHHHC
T ss_pred CccCHHHHHHHHHHHHHhc
Confidence 9 89999999999999865
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-35 Score=248.85 Aligned_cols=249 Identities=12% Similarity=0.091 Sum_probs=184.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc---------------hhhcccc-CcCCcEEEEEccCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT---------------EHLRELD-GATERLHLFKANLLE 69 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~~~~-~~~~~~~~~~~Dl~~ 69 (258)
.++++||||||+||||++|+++|+++|++|++++|....... +.+.... ....++.++.+|+++
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 367899999999999999999999999999999885422100 0010000 012468899999999
Q ss_pred cccHHHHhCC--CcEEEecCCCCCC--CCCCc------------------------------------------------
Q 025065 70 EGSFDSAVDG--CDGVFHTASPVIF--LSDNP------------------------------------------------ 97 (258)
Q Consensus 70 ~~~~~~~~~~--~d~Vih~a~~~~~--~~~~~------------------------------------------------ 97 (258)
++.+.+++++ +|+|||+||.... ...++
T Consensus 89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E 168 (404)
T 1i24_A 89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE 168 (404)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCc
Confidence 9999999987 9999999987431 11111
Q ss_pred --------------------hhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCC----------------CC
Q 025065 98 --------------------QEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI----------------LN 141 (258)
Q Consensus 98 --------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~----------------~~ 141 (258)
.+.|+.+|.++|.+++.++.++|++++++||++||||+.... ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~ 248 (404)
T 1i24_A 169 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT 248 (404)
T ss_dssp SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred cccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhh
Confidence 014999999999999998888899999999999999976421 12
Q ss_pred ccHHHHHHHHcCCC--CCC---CCcceeeHHHHHHHHHHhhcCCCCCc---eEEEeCCCcCHHHHHHHHHHh---CCCCC
Q 025065 142 FGAEVILNLINGDQ--SFA---FPYIFVEIRDVVYAHIRALEVPKASG---RYLLAGSVAQHSDILKFLREH---YPTLL 210 (258)
Q Consensus 142 ~~~~~~~~~~~g~~--~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~---~~~~~~~~~t~~e~~~~i~~~---~~~~~ 210 (258)
....++..+..|.+ +++ +.++|+|++|+|++++.+++++...| +|+++++.+|+.|+++.+.+. +|...
T Consensus 249 ~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~~~~~g~~~ 328 (404)
T 1i24_A 249 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDV 328 (404)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHHHHhhCCCc
Confidence 34556667677762 334 67899999999999999998876434 787766889999999999998 55321
Q ss_pred ----CCCCCccCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 211 ----RSGKLEEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 211 ----~~~~~~~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
.|............+|++|+++|||+| ++++++++++++|++..
T Consensus 329 ~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~ 377 (404)
T 1i24_A 329 KKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQF 377 (404)
T ss_dssp CEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred cccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhh
Confidence 111111112335668999997799999 89999999999999653
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=239.34 Aligned_cols=219 Identities=16% Similarity=0.213 Sum_probs=169.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+|+|||||| ||||++|+++|+++|++|++++|++.... .+. ..+++++.+|+++.+ +.++|+|||+|
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~-----~~~~~~~~~D~~d~~-----~~~~d~vi~~a 71 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME--AIR-----ASGAEPLLWPGEEPS-----LDGVTHLLIST 71 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH--HHH-----HTTEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh--hHh-----hCCCeEEEecccccc-----cCCCCEEEECC
Confidence 578999998 99999999999999999999999764421 111 146899999999965 78899999999
Q ss_pred CCCCCCCCCch------------------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEE
Q 025065 88 SPVIFLSDNPQ------------------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVA 125 (258)
Q Consensus 88 ~~~~~~~~~~~------------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~i 125 (258)
+.......... +.|+.+|.++|++++.+ .++++++
T Consensus 72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~---~~~~~~i 148 (286)
T 3ius_A 72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV---PNLPLHV 148 (286)
T ss_dssp CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS---TTCCEEE
T ss_pred CccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh---cCCCEEE
Confidence 87532110000 46999999999998776 5899999
Q ss_pred EcCCccccCCcCCCCCccHHHHHHHHcCC-CCC-C--CCcceeeHHHHHHHHHHhhcCCCCCceEEE-eCCCcCHHHHHH
Q 025065 126 IHPGTVIGPFFQPILNFGAEVILNLINGD-QSF-A--FPYIFVEIRDVVYAHIRALEVPKASGRYLL-AGSVAQHSDILK 200 (258)
Q Consensus 126 lRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~-~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~t~~e~~~ 200 (258)
+||+++||++.... .++..|. ..+ + +.++|+|++|+|++++.+++++..+++|++ +++.+|+.|+++
T Consensus 149 lRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~ 220 (286)
T 3ius_A 149 FRLAGIYGPGRGPF--------SKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIA 220 (286)
T ss_dssp EEECEEEBTTBSSS--------TTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHHHHH
T ss_pred EeccceECCCchHH--------HHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHHHHH
Confidence 99999999985532 2233454 222 2 788999999999999999999876568855 578899999999
Q ss_pred HHHHhCCCCCCCCCCc----------cCCCCccccCHHHH-HhcCCCc-c-chhHHHHHHHHH
Q 025065 201 FLREHYPTLLRSGKLE----------EKYQPTIKVSQERA-KSLGINF-T-PWEVGVRGCIES 250 (258)
Q Consensus 201 ~i~~~~~~~~~~~~~~----------~~~~~~~~~d~~k~-~~lg~~p-~-~~~~~l~~~~~~ 250 (258)
.+.+.+|....+.... ........+|++|+ +.|||+| + +++++|+++++.
T Consensus 221 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~ 283 (286)
T 3ius_A 221 YAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQAD 283 (286)
T ss_dssp HHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHT
T ss_pred HHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHh
Confidence 9999997542211111 11236778999999 6699999 7 799999999864
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=245.37 Aligned_cols=246 Identities=17% Similarity=0.148 Sum_probs=179.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc-----cchhhccccC-cCCcEEEEEccCCCcccHHHHhC--C
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-----KTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD--G 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--~ 79 (258)
+|+||||||+||||++|+++|+++|++|++++|..... ....+..+.. ...++.++.+|+++++.+.++++ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence 47899999999999999999999999999999865430 1111111110 12468899999999999999998 8
Q ss_pred CcEEEecCCCCCCC--CCCc----------------------------------------------------hhhHHHHH
Q 025065 80 CDGVFHTASPVIFL--SDNP----------------------------------------------------QEWYSLAK 105 (258)
Q Consensus 80 ~d~Vih~a~~~~~~--~~~~----------------------------------------------------~~~Y~~sK 105 (258)
+|+|||+|+..... ..++ .+.|+.+|
T Consensus 82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK 161 (348)
T 1ek6_A 82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK 161 (348)
T ss_dssp EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHH
Confidence 99999999964210 0010 14699999
Q ss_pred HHHHHHHHHHHHH-cCCcEEEEcCCccccCCcCCC--------CCccHHHHHHHHc--CCC--CC--------C-CCcce
Q 025065 106 TLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLIN--GDQ--SF--------A-FPYIF 163 (258)
Q Consensus 106 ~~~e~~~~~~~~~-~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~--g~~--~~--------~-~~~~~ 163 (258)
.++|.+++.++++ .+++++++||+++|||..... .......+.+... +.+ ++ + +.++|
T Consensus 162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 241 (348)
T 1ek6_A 162 FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY 241 (348)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECE
T ss_pred HHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEee
Confidence 9999999998877 239999999999999953110 0112222333333 221 11 2 56899
Q ss_pred eeHHHHHHHHHHhhcCC--CCC-ceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccCHHHH-HhcCC
Q 025065 164 VEIRDVVYAHIRALEVP--KAS-GRYLL-AGSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERA-KSLGI 235 (258)
Q Consensus 164 i~v~D~a~~~~~~~~~~--~~~-~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~-~~lg~ 235 (258)
+|++|+|++++.+++++ ..+ ++|++ +++.+|+.|+++.+.+.+|.. .+.... ........+|++|+ +.|||
T Consensus 242 i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 320 (348)
T 1ek6_A 242 IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK-IPYKVVARREGDVAACYANPSLAQEELGW 320 (348)
T ss_dssp EEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC-CCEEEECCCTTCCSEECBCCHHHHHTTCC
T ss_pred EEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCC-CceeeCCCCCccchhhccCHHHHHHhcCC
Confidence 99999999999999865 233 47855 578899999999999998753 221111 22344678999999 77999
Q ss_pred Cc-cchhHHHHHHHHHHHHc
Q 025065 236 NF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 236 ~p-~~~~~~l~~~~~~~~~~ 254 (258)
+| ++++++|+++++|++++
T Consensus 321 ~p~~~l~~~l~~~~~w~~~~ 340 (348)
T 1ek6_A 321 TAALGLDRMCEDLWRWQKQN 340 (348)
T ss_dssp CCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHhc
Confidence 99 89999999999999876
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=239.61 Aligned_cols=240 Identities=21% Similarity=0.248 Sum_probs=181.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~V 83 (258)
++||+||||||+||||++|+++|+++|++|++++|+..... ..+..+ .++.++.+|+++++.+.+++++ +|+|
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~l~~~----~~~~~~~~Dl~d~~~~~~~~~~~~~D~v 93 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR-EHLKDH----PNLTFVEGSIADHALVNQLIGDLQPDAV 93 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-GGSCCC----TTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch-hhHhhc----CCceEEEEeCCCHHHHHHHHhccCCcEE
Confidence 46789999999999999999999999999999999754321 111111 4689999999999999999987 9999
Q ss_pred EecCCCCCCC-CC--------------------------------------------------Cch-hhHHHHHHHHHHH
Q 025065 84 FHTASPVIFL-SD--------------------------------------------------NPQ-EWYSLAKTLAEEA 111 (258)
Q Consensus 84 ih~a~~~~~~-~~--------------------------------------------------~~~-~~Y~~sK~~~e~~ 111 (258)
||+|+..... .. .+. +.|+.+|.++|.+
T Consensus 94 ih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~ 173 (333)
T 2q1w_A 94 VHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDY 173 (333)
T ss_dssp EECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHH
T ss_pred EECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHH
Confidence 9999864321 00 122 3699999999999
Q ss_pred HHH-HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCC-C-CCcceeeHHHHHHHHHHhhcCCCCCceEEE
Q 025065 112 AWK-FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF-A-FPYIFVEIRDVVYAHIRALEVPKASGRYLL 188 (258)
Q Consensus 112 ~~~-~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~ 188 (258)
++. +. +++++||+++|||+.. ......++..+..+...+ + ..++|+|++|+|++++.+++++. +++|++
T Consensus 174 ~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-g~~~~v 245 (333)
T 2q1w_A 174 LEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVG-HGAYHF 245 (333)
T ss_dssp HHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC-CEEEEC
T ss_pred HHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC-CCEEEe
Confidence 766 43 8999999999999832 123344555555654222 3 67899999999999999999876 558855
Q ss_pred -eCCCcCHHHHHHHHHHhCCCCCCCCCCc-----cCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHcCCCC
Q 025065 189 -AGSVAQHSDILKFLREHYPTLLRSGKLE-----EKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFLS 258 (258)
Q Consensus 189 -~~~~~t~~e~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~~~~~ 258 (258)
+++.+|+.|+++.+.+.+|...+..... ........+|++|++.+||+| ++++++|+++++|++++++++
T Consensus 246 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~~~~ 322 (333)
T 2q1w_A 246 SSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGVSG 322 (333)
T ss_dssp SCSCCEEHHHHHHHHHHHTTCSSCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred CCCCCccHHHHHHHHHHHhCCCCceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHHHCCCC
Confidence 5788999999999999997541111111 112256789999993349999 999999999999999998874
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=239.74 Aligned_cols=241 Identities=17% Similarity=0.188 Sum_probs=183.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDG 82 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~ 82 (258)
.+++|+||||||+||||++|+++|+++|++|++++|+..... .....+ .++.++.+|+++++++.++++ ++|+
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 91 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR-EVLPPV----AGLSVIEGSVTDAGLLERAFDSFKPTH 91 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG-GGSCSC----TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch-hhhhcc----CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence 356789999999999999999999999999999999654422 111111 468999999999999999998 9999
Q ss_pred EEecCCCCCCC-CCC-------------------------------------------------chhhHHHHHHHHHHHH
Q 025065 83 VFHTASPVIFL-SDN-------------------------------------------------PQEWYSLAKTLAEEAA 112 (258)
Q Consensus 83 Vih~a~~~~~~-~~~-------------------------------------------------~~~~Y~~sK~~~e~~~ 112 (258)
|||+|+..... ..+ +.+.|+.+|.++|.++
T Consensus 92 vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~ 171 (330)
T 2pzm_A 92 VVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFL 171 (330)
T ss_dssp EEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHH
T ss_pred EEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHH
Confidence 99999975331 100 1125999999999997
Q ss_pred HHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCC-C-CcceeeHHHHHH-HHHHhhcCCCCCceEEEe
Q 025065 113 WKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-F-PYIFVEIRDVVY-AHIRALEVPKASGRYLLA 189 (258)
Q Consensus 113 ~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~-~~~~i~v~D~a~-~~~~~~~~~~~~~~~~~~ 189 (258)
+.+ +++++++||+++|||+.. ......++..+..+...++ . .++|+|++|+|+ +++.+++++. +++|+++
T Consensus 172 ~~~----~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~-g~~~~v~ 244 (330)
T 2pzm_A 172 MMS----DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRP-TGVFNVS 244 (330)
T ss_dssp HTC----SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTTCC-CEEEEES
T ss_pred HHc----CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhcCC-CCEEEeC
Confidence 665 899999999999999852 1223344555555543333 2 578999999999 9999998865 5588555
Q ss_pred -CCCcCHHHHHHHHHHhCCCCCCCCCCccCCCCccccCHHHH-----HhcCCCc-cchhHHHHHHHHHHHHcCCC
Q 025065 190 -GSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKVSQERA-----KSLGINF-TPWEVGVRGCIESLMEKGFL 257 (258)
Q Consensus 190 -~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~lg~~p-~~~~~~l~~~~~~~~~~~~~ 257 (258)
++.+|+.|+++.+.+.+|..++.............+|++|+ +.|||+| ++++++|+++++|+++++++
T Consensus 245 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 319 (330)
T 2pzm_A 245 TGEGHSIKEVFDVVLDYVGATLAEPVPVVAPGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYDKYGVT 319 (330)
T ss_dssp CSCCEEHHHHHHHHHHHHTCCCSSCCCEECCCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred CCCCCCHHHHHHHHHHHhCCCCceeCCCCcchhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHHHHHhhCcc
Confidence 67899999999999998764211111111344566777776 7799999 99999999999999999876
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-35 Score=241.34 Aligned_cols=234 Identities=17% Similarity=0.242 Sum_probs=179.2
Q ss_pred EEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEe
Q 025065 10 VVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 85 (258)
+||||||+||||++|+++|+++ |++|++++|+.... .++.++.+|+++++.+.++++ ++|+|||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence 5999999999999999999998 89999999875432 135788999999999999997 8999999
Q ss_pred cCCCCCCC-CCCc----------------------------------------------------hhhHHHHHHHHHHHH
Q 025065 86 TASPVIFL-SDNP----------------------------------------------------QEWYSLAKTLAEEAA 112 (258)
Q Consensus 86 ~a~~~~~~-~~~~----------------------------------------------------~~~Y~~sK~~~e~~~ 112 (258)
+|+..... ..++ .+.|+.+|.++|.++
T Consensus 69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~ 148 (317)
T 3ajr_A 69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLG 148 (317)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred CCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHH
Confidence 99864210 0011 046999999999999
Q ss_pred HHHHHHcCCcEEEEcCCccccCCcCCCCC---ccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCC--
Q 025065 113 WKFAKENGIDLVAIHPGTVIGPFFQPILN---FGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKA-- 182 (258)
Q Consensus 113 ~~~~~~~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~-- 182 (258)
+.++++++++++++||+.+||+...+... .....+.+.+.+. ..+. ..++|+|++|+|++++.+++++..
T Consensus 149 ~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~ 228 (317)
T 3ajr_A 149 QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL 228 (317)
T ss_dssp HHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGC
T ss_pred HHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccc
Confidence 99888889999999999999986543211 1222333434333 2222 789999999999999999987643
Q ss_pred --CceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCc----cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 183 --SGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE----EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 183 --~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~----~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+++|+++++.+|+.|+++.+.+.+|...++.... ........+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 229 ~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 308 (317)
T 3ajr_A 229 VLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEK 308 (317)
T ss_dssp SSCSCEECCSEEECHHHHHHHHHTTCCSCCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ccCceEecCCccccHHHHHHHHHHHCCccccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 2588777788999999999999987433222111 01123456899999 7799999 89999999999999875
Q ss_pred C
Q 025065 255 G 255 (258)
Q Consensus 255 ~ 255 (258)
.
T Consensus 309 ~ 309 (317)
T 3ajr_A 309 L 309 (317)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-35 Score=238.14 Aligned_cols=216 Identities=13% Similarity=0.068 Sum_probs=170.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~ 86 (258)
|+|||||||||||++|+++|+++|++|++++|. ++|+++.+.+.++++ ++|+|||+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~~d~vi~~ 63 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEIRPHIIIHC 63 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhcCCCEEEEC
Confidence 489999999999999999999999999999983 279999999999887 69999999
Q ss_pred CCCCCCC--CCCch--------------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 87 ASPVIFL--SDNPQ--------------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 87 a~~~~~~--~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
|+..... ..++. +.|+.+|.++|++++.
T Consensus 64 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 143 (287)
T 3sc6_A 64 AAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKE 143 (287)
T ss_dssp CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred CcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 9875421 11111 5799999999999776
Q ss_pred HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC-CCcceeeHHHHHHHHHHhhcCCCCCceEEE-eC
Q 025065 115 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLL-AG 190 (258)
Q Consensus 115 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~ 190 (258)
+ ..+++++||+.+|||.... ....++.....+. ...+ +.++|+|++|+|++++.+++++. .++|++ ++
T Consensus 144 ~----~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~ 215 (287)
T 3sc6_A 144 L----HNKYFIVRTSWLYGKYGNN---FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL-YGTYHVSNT 215 (287)
T ss_dssp H----CSSEEEEEECSEECSSSCC---HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC-CEEEECCCB
T ss_pred h----CCCcEEEeeeeecCCCCCc---HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC-CCeEEEcCC
Confidence 5 4588999999999997542 2344455555555 3334 78899999999999999999987 678854 57
Q ss_pred CCcCHHHHHHHHHHhCCCCC----CCC---CCccCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 191 SVAQHSDILKFLREHYPTLL----RSG---KLEEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 191 ~~~t~~e~~~~i~~~~~~~~----~~~---~~~~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+.+|+.|+++.+.+.+|... ++. ...........+|++|++.|||+| ++++++|+++++|++++
T Consensus 216 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 287 (287)
T 3sc6_A 216 GSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKSH 287 (287)
T ss_dssp SCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC--
T ss_pred CcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhcC
Confidence 78999999999999997532 111 011233456789999999999999 99999999999998653
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=243.83 Aligned_cols=246 Identities=18% Similarity=0.171 Sum_probs=180.4
Q ss_pred CcEEEEECCcchHHHHHHHHHH-HCCCEEEEEEcCCCCcc-------chhh----ccccCc--CCc---EEEEEccCCCc
Q 025065 8 EKVVCVTGASGFVASWLVKLLL-QRGYTVKATVRDPNSPK-------TEHL----RELDGA--TER---LHLFKANLLEE 70 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~-~~g~~V~~~~r~~~~~~-------~~~~----~~~~~~--~~~---~~~~~~Dl~~~ 70 (258)
+|+||||||+||||++|+++|+ ++|++|++++|+..... ...+ ..+... ..+ +.++.+|++++
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4689999999999999999999 99999999998764420 1111 111110 124 88999999999
Q ss_pred ccHHHHhC--C-CcEEEecCCCCCCC--CCCc------------------------------------------------
Q 025065 71 GSFDSAVD--G-CDGVFHTASPVIFL--SDNP------------------------------------------------ 97 (258)
Q Consensus 71 ~~~~~~~~--~-~d~Vih~a~~~~~~--~~~~------------------------------------------------ 97 (258)
+.+.++++ + +|+|||+|+..... ..++
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~ 161 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence 99999887 6 99999999974321 0011
Q ss_pred ----------hhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCC-------CCccHHHHH-----HHHcCCC
Q 025065 98 ----------QEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI-------LNFGAEVIL-----NLINGDQ 155 (258)
Q Consensus 98 ----------~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~-----~~~~g~~ 155 (258)
.+.|+.+|.++|.+++.++.+++++++++||++||||..... .......+. ++..+..
T Consensus 162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (397)
T 1gy8_A 162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR 241 (397)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCc
Confidence 135999999999999999888899999999999999974311 111222222 3333321
Q ss_pred --------------C--------CC-CCcceeeHHHHHHHHHHhhcCCC-C-----C---ceEEE-eCCCcCHHHHHHHH
Q 025065 156 --------------S--------FA-FPYIFVEIRDVVYAHIRALEVPK-A-----S---GRYLL-AGSVAQHSDILKFL 202 (258)
Q Consensus 156 --------------~--------~~-~~~~~i~v~D~a~~~~~~~~~~~-~-----~---~~~~~-~~~~~t~~e~~~~i 202 (258)
+ -+ +.++|+|++|+|++++.+++++. . . ++|++ +++.+|+.|+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i 321 (397)
T 1gy8_A 242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVA 321 (397)
T ss_dssp ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHH
T ss_pred cccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHH
Confidence 1 12 56899999999999999987643 1 2 67865 57899999999999
Q ss_pred HHhCCCCCCCCCCc---cCCCCccccCHHHH-HhcCCCc-c-chhHHHHHHHHHHHHc
Q 025065 203 REHYPTLLRSGKLE---EKYQPTIKVSQERA-KSLGINF-T-PWEVGVRGCIESLMEK 254 (258)
Q Consensus 203 ~~~~~~~~~~~~~~---~~~~~~~~~d~~k~-~~lg~~p-~-~~~~~l~~~~~~~~~~ 254 (258)
.+.+|.. .+.... ........+|++|+ +.|||+| + +++++|+++++|++++
T Consensus 322 ~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~ 378 (397)
T 1gy8_A 322 RKTTGHP-IPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH 378 (397)
T ss_dssp HHHHCCC-CCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHHhCCC-CCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence 9998753 221111 22345678999999 7899999 6 9999999999999876
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=239.94 Aligned_cols=243 Identities=18% Similarity=0.155 Sum_probs=176.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 84 (258)
|+||||||+||||++|+++|+++|++|++++|....... ..+.... ..++.++.+|+++++.+.++++ ++|+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi 78 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence 479999999999999999999999999999875433211 1111110 2357889999999999998886 599999
Q ss_pred ecCCCCCCC--CCCc----------------------------------------------------hhhHHHHHHHHHH
Q 025065 85 HTASPVIFL--SDNP----------------------------------------------------QEWYSLAKTLAEE 110 (258)
Q Consensus 85 h~a~~~~~~--~~~~----------------------------------------------------~~~Y~~sK~~~e~ 110 (258)
|+||..... ..++ .+.|+.+|.++|.
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~ 158 (338)
T 1udb_A 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQ 158 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHH
Confidence 999864210 0000 1469999999999
Q ss_pred HHHHHHHHc-CCcEEEEcCCccccCCcCC------C--CCccHHHHHHHHcCC-C---C------C--C-CCcceeeHHH
Q 025065 111 AAWKFAKEN-GIDLVAIHPGTVIGPFFQP------I--LNFGAEVILNLINGD-Q---S------F--A-FPYIFVEIRD 168 (258)
Q Consensus 111 ~~~~~~~~~-~~~~~ilRp~~v~G~~~~~------~--~~~~~~~~~~~~~g~-~---~------~--~-~~~~~i~v~D 168 (258)
+++.++.+. +++++++||+++||+.... . .......+.+...+. . . . + +.++|+|++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D 238 (338)
T 1udb_A 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_dssp HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred HHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHH
Confidence 999988876 8999999999999984311 0 111222333333322 1 1 1 1 5689999999
Q ss_pred HHHHHHHhhcCC--CCC-ceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccCHHHH-HhcCCCc-cc
Q 025065 169 VVYAHIRALEVP--KAS-GRYLL-AGSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERA-KSLGINF-TP 239 (258)
Q Consensus 169 ~a~~~~~~~~~~--~~~-~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~-~~lg~~p-~~ 239 (258)
+|++++.+++++ ... ++|++ +++.+|+.|+++.+.+.+|.. .+.... ........+|++|+ +.|||+| ++
T Consensus 239 va~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~ 317 (338)
T 1udb_A 239 LADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP-VNYHFAPRREGDLPAYWADASKADRELNWRVTRT 317 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSC-CCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCCC
T ss_pred HHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCC-CcceeCCCCCCchhhhhcCHHHHHHHcCCCcCCC
Confidence 999999998753 223 47855 578899999999999998742 222111 22334567899999 7799999 89
Q ss_pred hhHHHHHHHHHHHHc
Q 025065 240 WEVGVRGCIESLMEK 254 (258)
Q Consensus 240 ~~~~l~~~~~~~~~~ 254 (258)
++++|+++++|++.+
T Consensus 318 l~~~l~~~~~w~~~~ 332 (338)
T 1udb_A 318 LDEMAQDTWHWQSRH 332 (338)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999876
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=239.92 Aligned_cols=245 Identities=17% Similarity=0.120 Sum_probs=183.2
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC----cCC-cEEEEEccCCCcccHHHHhCC--Cc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG----ATE-RLHLFKANLLEEGSFDSAVDG--CD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~-~~~~~~~Dl~~~~~~~~~~~~--~d 81 (258)
|+||||||+||||++|+++|+++|++|++++|+........+..+.. ... ++.++.+|+++.+.+.+++++ +|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 68999999999999999999999999999999875421111111110 012 688999999999999998875 79
Q ss_pred EEEecCCCCCCC--C-------------------------------------------------------CCchhhHHHH
Q 025065 82 GVFHTASPVIFL--S-------------------------------------------------------DNPQEWYSLA 104 (258)
Q Consensus 82 ~Vih~a~~~~~~--~-------------------------------------------------------~~~~~~Y~~s 104 (258)
+|||+|+..... . ..+.+.|+.+
T Consensus 109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~s 188 (381)
T 1n7h_A 109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAS 188 (381)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHH
Confidence 999999864310 0 0111569999
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC-CC--CC---CCcceeeHHHHHHHHHHh
Q 025065 105 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 105 K~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~-~~--~~---~~~~~i~v~D~a~~~~~~ 176 (258)
|.++|.+++.++.+++++++++|++++|||+...... ....++..+..|. .. ++ ..++|+|++|+|++++.+
T Consensus 189 K~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~ 268 (381)
T 1n7h_A 189 KCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLM 268 (381)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHH
Confidence 9999999999988889999999999999997653211 1123344455564 22 23 678999999999999999
Q ss_pred hcCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCCC---CCCC---CccCCCCccccCHHHH-HhcCCCc-cchhHHHHHH
Q 025065 177 LEVPKASGRY-LLAGSVAQHSDILKFLREHYPTLL---RSGK---LEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGC 247 (258)
Q Consensus 177 ~~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~---~~~~---~~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~ 247 (258)
++++. .++| +++++.+|+.|+++.+.+.+|... ++.. ..+.......+|++|+ +.|||+| ++++++|+++
T Consensus 269 ~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~ 347 (381)
T 1n7h_A 269 LQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMM 347 (381)
T ss_dssp HTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHH
T ss_pred HhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCCcccCCHHHHHHHH
Confidence 98865 4677 455778999999999999997531 1110 0122334567899999 7799999 9999999999
Q ss_pred HHHHHHc
Q 025065 248 IESLMEK 254 (258)
Q Consensus 248 ~~~~~~~ 254 (258)
++|++++
T Consensus 348 ~~~~~~~ 354 (381)
T 1n7h_A 348 VDEDLEL 354 (381)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999764
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=234.12 Aligned_cols=228 Identities=13% Similarity=0.146 Sum_probs=155.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih 85 (258)
+|+|||||||||||++|+++|+++|++|++++|+... ++ ++.+|+++++.+.+++++ +|+|||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih 66 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVH 66 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHHCCSEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------CC--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence 4789999999999999999999999999999986532 12 678999999999998874 999999
Q ss_pred cCCCCCCC--CCCch-------------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 86 TASPVIFL--SDNPQ-------------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 86 ~a~~~~~~--~~~~~-------------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
+|+..... ..++. +.|+.+|..+|.+++.
T Consensus 67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 146 (315)
T 2ydy_A 67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLE 146 (315)
T ss_dssp CC-------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 99975321 11111 4699999999999766
Q ss_pred HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHH-cCCC--CCC-CCcceeeHHHHHHHHHHhhcCC----CCCceE
Q 025065 115 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI-NGDQ--SFA-FPYIFVEIRDVVYAHIRALEVP----KASGRY 186 (258)
Q Consensus 115 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~g~~--~~~-~~~~~i~v~D~a~~~~~~~~~~----~~~~~~ 186 (258)
+ +++++++||+.|||+...........++.... .+.. ..+ +.++|+|++|+|++++.+++++ ...++|
T Consensus 147 ~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ 222 (315)
T 2ydy_A 147 N----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTF 222 (315)
T ss_dssp H----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEE
T ss_pred h----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeE
Confidence 5 57889999999999976532122222344444 4542 223 7789999999999999998753 345578
Q ss_pred E-EeCCCcCHHHHHHHHHHhCCCCC-----CCCCC--ccCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 187 L-LAGSVAQHSDILKFLREHYPTLL-----RSGKL--EEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 187 ~-~~~~~~t~~e~~~~i~~~~~~~~-----~~~~~--~~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+ .+++.+|+.|+++.+.+.+|... ++... .........+|++|++.+||+| ++++++|+++++|++++
T Consensus 223 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~ 299 (315)
T 2ydy_A 223 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLID 299 (315)
T ss_dssp ECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred EEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccc
Confidence 5 45789999999999999997542 11100 1123346789999994449999 99999999999999765
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=253.25 Aligned_cols=245 Identities=18% Similarity=0.260 Sum_probs=187.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc-HHHHhCCCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS-FDSAVDGCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~Vi 84 (258)
++|+|||||||||||++|+++|+++ |++|++++|+...... +.. ..+++++.+|+++.++ +.++++++|+||
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~--~~~----~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vi 387 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR--FLN----HPHFHFVEGDISIHSEWIEYHVKKCDVVL 387 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG--GTT----CTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh--hcc----CCceEEEECCCCCcHHHHHHhhcCCCEEE
Confidence 5789999999999999999999998 8999999997654311 111 2478999999999865 777888999999
Q ss_pred ecCCCCCCC--CCCch---------------------------------------------------------hhHHHHH
Q 025065 85 HTASPVIFL--SDNPQ---------------------------------------------------------EWYSLAK 105 (258)
Q Consensus 85 h~a~~~~~~--~~~~~---------------------------------------------------------~~Y~~sK 105 (258)
|+|+..... ..++. +.|+.+|
T Consensus 388 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK 467 (660)
T 1z7e_A 388 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK 467 (660)
T ss_dssp ECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred ECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHH
Confidence 999975321 01110 1599999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcCCccccCCcCC-------CCCccHHHHHHHHcCCC--CCC---CCcceeeHHHHHHHH
Q 025065 106 TLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP-------ILNFGAEVILNLINGDQ--SFA---FPYIFVEIRDVVYAH 173 (258)
Q Consensus 106 ~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~g~~--~~~---~~~~~i~v~D~a~~~ 173 (258)
.++|.+++.++++++++++++||++|||+.... .......++.++..|.+ .++ +.++|+|++|+|+++
T Consensus 468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai 547 (660)
T 1z7e_A 468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547 (660)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHH
Confidence 999999999988889999999999999998642 11223455666666662 222 678999999999999
Q ss_pred HHhhcCCC--CCc-eEEEe-CC-CcCHHHHHHHHHHhCCCC----CCCCCCc-------------cCCCCccccCHHHH-
Q 025065 174 IRALEVPK--ASG-RYLLA-GS-VAQHSDILKFLREHYPTL----LRSGKLE-------------EKYQPTIKVSQERA- 230 (258)
Q Consensus 174 ~~~~~~~~--~~~-~~~~~-~~-~~t~~e~~~~i~~~~~~~----~~~~~~~-------------~~~~~~~~~d~~k~- 230 (258)
+.+++++. ..| +|+++ ++ .+|+.|+++.+.+.+|.. .+|.... ........+|++|+
T Consensus 548 ~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~ 627 (660)
T 1z7e_A 548 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAH 627 (660)
T ss_dssp HHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHH
T ss_pred HHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcccCHHHHH
Confidence 99998764 234 78665 44 799999999999987632 1222110 01234567899999
Q ss_pred HhcCCCc-cchhHHHHHHHHHHHHcCCC
Q 025065 231 KSLGINF-TPWEVGVRGCIESLMEKGFL 257 (258)
Q Consensus 231 ~~lg~~p-~~~~~~l~~~~~~~~~~~~~ 257 (258)
+.|||+| ++++++|+++++|++++..+
T Consensus 628 ~~LG~~p~~~l~egl~~~i~~~~~~~~~ 655 (660)
T 1z7e_A 628 RCLDWEPKIDMQETIDETLDFFLRTVDL 655 (660)
T ss_dssp HHHCCCCCCCHHHHHHHHHHHHHTTSCC
T ss_pred HhcCCCccCcHHHHHHHHHHHHHhhccc
Confidence 7799999 99999999999999987643
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=235.45 Aligned_cols=222 Identities=14% Similarity=0.127 Sum_probs=171.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih~ 86 (258)
|+||||||+||||++|+++|+ +|++|++++|+.. ++.+|+++++.+.+++++ +|+|||+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~~~d~vih~ 61 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------EFCGDFSNPKGVAETVRKLRPDVIVNA 61 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------cccccCCCHHHHHHHHHhcCCCEEEEC
Confidence 479999999999999999999 8999999998651 245899999999999876 9999999
Q ss_pred CCCCCC--CCCCch--------------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 87 ASPVIF--LSDNPQ--------------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 87 a~~~~~--~~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
|+.... ...++. +.|+.+|.++|++++.
T Consensus 62 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 141 (299)
T 1n2s_A 62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD 141 (299)
T ss_dssp CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred cccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 987532 111111 4799999999999776
Q ss_pred HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC-CCcceeeHHHHHHHHHHhhcCC--CC--CceEE
Q 025065 115 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVP--KA--SGRYL 187 (258)
Q Consensus 115 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~-~~~~~i~v~D~a~~~~~~~~~~--~~--~~~~~ 187 (258)
+. .+++++||+++||++.. .....++..+..+. ...+ +.++|+|++|+|++++.+++++ .. .++|+
T Consensus 142 ~~----~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~ 214 (299)
T 1n2s_A 142 NC----PKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYH 214 (299)
T ss_dssp HC----SSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEE
T ss_pred hC----CCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEE
Confidence 53 49999999999999754 22344555555665 2334 7789999999999999999876 22 55885
Q ss_pred E-eCCCcCHHHHHHHHHHhCCCCC----------CCCCC---ccCCCCccccCHHHH-HhcCCCccchhHHHHHHHHHHH
Q 025065 188 L-AGSVAQHSDILKFLREHYPTLL----------RSGKL---EEKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLM 252 (258)
Q Consensus 188 ~-~~~~~t~~e~~~~i~~~~~~~~----------~~~~~---~~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~~~ 252 (258)
+ +++.+|+.|+++.+.+.+|... .+... .........+|++|+ +.|||+|++++++|+++++|++
T Consensus 215 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~ 294 (299)
T 1n2s_A 215 LVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMF 294 (299)
T ss_dssp CCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 5 5689999999999999875321 11100 012245678999999 7799999889999999999999
Q ss_pred HcCC
Q 025065 253 EKGF 256 (258)
Q Consensus 253 ~~~~ 256 (258)
++.-
T Consensus 295 ~~~~ 298 (299)
T 1n2s_A 295 TTTT 298 (299)
T ss_dssp SCCC
T ss_pred hcCC
Confidence 7653
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=252.68 Aligned_cols=248 Identities=18% Similarity=0.192 Sum_probs=181.0
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC--CC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD--GC 80 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~ 80 (258)
.+++|+||||||+||||++|+++|+++|++|++++|+...... ..+..+. ..++.++.+|+++++.+.++++ ++
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~~ 85 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKI 85 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhCCC
Confidence 3467899999999999999999999999999999987654321 1111111 2467899999999999999988 89
Q ss_pred cEEEecCCCCCCC--CCCc-------------------------------------------------------hhhHHH
Q 025065 81 DGVFHTASPVIFL--SDNP-------------------------------------------------------QEWYSL 103 (258)
Q Consensus 81 d~Vih~a~~~~~~--~~~~-------------------------------------------------------~~~Y~~ 103 (258)
|+|||+|+..... ...+ .+.|+.
T Consensus 86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~ 165 (699)
T 1z45_A 86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGH 165 (699)
T ss_dssp CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHH
T ss_pred CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHH
Confidence 9999999874311 0000 036999
Q ss_pred HHHHHHHHHHHHHHH--cCCcEEEEcCCccccCCcCCC--------CCccHHHHHHHHcC--C--CCC--------C-CC
Q 025065 104 AKTLAEEAAWKFAKE--NGIDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLING--D--QSF--------A-FP 160 (258)
Q Consensus 104 sK~~~e~~~~~~~~~--~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~g--~--~~~--------~-~~ 160 (258)
+|.++|.+++.++.+ .+++++++||+++||+..... .......+.+...+ . .++ + +.
T Consensus 166 sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 245 (699)
T 1z45_A 166 TKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPI 245 (699)
T ss_dssp HHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCE
T ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCee
Confidence 999999999998877 699999999999999853211 01222334444443 2 222 2 57
Q ss_pred cceeeHHHHHHHHHHhhcCC------C-CCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccCHHH
Q 025065 161 YIFVEIRDVVYAHIRALEVP------K-ASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQER 229 (258)
Q Consensus 161 ~~~i~v~D~a~~~~~~~~~~------~-~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k 229 (258)
++|+|++|+|++++.++++. . ..++|++ +++.+|+.|+++.+++.+|... +.... ........+|++|
T Consensus 246 ~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~d~~k 324 (699)
T 1z45_A 246 RDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL-PYKVTGRRAGDVLNLTAKPDR 324 (699)
T ss_dssp ECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCC-CC---------CCCCCBCCHH
T ss_pred EeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCC-CceecCCCCCccccccCCHHH
Confidence 89999999999999998742 1 2247855 5788999999999999987532 22111 2234567899999
Q ss_pred H-HhcCCCc-cchhHHHHHHHHHHHHcC
Q 025065 230 A-KSLGINF-TPWEVGVRGCIESLMEKG 255 (258)
Q Consensus 230 ~-~~lg~~p-~~~~~~l~~~~~~~~~~~ 255 (258)
+ +.|||+| ++++++|+++++|++++.
T Consensus 325 a~~~LG~~p~~~l~egl~~~~~w~~~~~ 352 (699)
T 1z45_A 325 AKRELKWQTELQVEDSCKDLWKWTTENP 352 (699)
T ss_dssp HHHHTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHhCC
Confidence 9 7899999 999999999999998864
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-32 Score=228.17 Aligned_cols=239 Identities=14% Similarity=0.153 Sum_probs=178.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-----CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC---
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-----YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--- 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--- 79 (258)
+|+|||||||||||++|+++|+++| ++|++++|++.... + ...+++++.+|+++++.+.+++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 72 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---H-----EDNPINYVQCDISDPDDSQAKLSPLTD 72 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---C-----CSSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---c-----ccCceEEEEeecCCHHHHHHHHhcCCC
Confidence 3689999999999999999999999 99999999875532 1 124688999999999999999988
Q ss_pred CcEEEecCCCCCCC--------------------CC------------------------------C---------c-hh
Q 025065 80 CDGVFHTASPVIFL--------------------SD------------------------------N---------P-QE 99 (258)
Q Consensus 80 ~d~Vih~a~~~~~~--------------------~~------------------------------~---------~-~~ 99 (258)
+|+|||+|+..... .. . + .+
T Consensus 73 ~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~ 152 (364)
T 2v6g_A 73 VTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMN 152 (364)
T ss_dssp CCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCC
T ss_pred CCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccch
Confidence 99999998853100 00 0 0 02
Q ss_pred hHHHHHHHHHHHHHHHHHHcC-CcEEEEcCCccccCCcCCCCCc-cHHHHHHHH---cCC-CC-CC------CCcceeeH
Q 025065 100 WYSLAKTLAEEAAWKFAKENG-IDLVAIHPGTVIGPFFQPILNF-GAEVILNLI---NGD-QS-FA------FPYIFVEI 166 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~~~-~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~---~g~-~~-~~------~~~~~i~v 166 (258)
.| ..+|++++.++++++ ++++++||++||||+....... ...++.+.+ .|. .. .+ ...+++|+
T Consensus 153 ~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v 228 (364)
T 2v6g_A 153 FY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDA 228 (364)
T ss_dssp HH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEH
T ss_pred hh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcH
Confidence 34 468898888877777 9999999999999987643221 222223322 455 22 33 35788999
Q ss_pred HHHHHHHHHhhcCCCCCc-eEEEe-CCCcCHHHHHHHHHHhCCCCC------CCCCC--------------------cc-
Q 025065 167 RDVVYAHIRALEVPKASG-RYLLA-GSVAQHSDILKFLREHYPTLL------RSGKL--------------------EE- 217 (258)
Q Consensus 167 ~D~a~~~~~~~~~~~~~~-~~~~~-~~~~t~~e~~~~i~~~~~~~~------~~~~~--------------------~~- 217 (258)
+|+|++++.+++++...| +|+++ ++.+|+.|+++.+.+.+|... +|.+. .+
T Consensus 229 ~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (364)
T 2v6g_A 229 DLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPT 308 (364)
T ss_dssp HHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCcc
Confidence 999999999999875445 88555 678999999999999987432 22210 00
Q ss_pred ---CC----------CCc-cccCHHHHHhcCCCc-cchhHHHHHHHHHHHHcCCCC
Q 025065 218 ---KY----------QPT-IKVSQERAKSLGINF-TPWEVGVRGCIESLMEKGFLS 258 (258)
Q Consensus 218 ---~~----------~~~-~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~~~~~ 258 (258)
.. ..+ ..+|++|+++|||+| ++++++++++++|++++++||
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp 364 (364)
T 2v6g_A 309 KLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP 364 (364)
T ss_dssp CHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred ccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 00 034 589999994499999 999999999999999999986
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=226.64 Aligned_cols=216 Identities=20% Similarity=0.206 Sum_probs=154.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|||||||||||||++|+++|+++||+|++++|++.+.. + ..| +...+.++++|+|||+|+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~-------------~---~~~----~~~~~~l~~~d~vihla~ 60 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR-------------I---TWD----ELAASGLPSCDAAVNLAG 60 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE-------------E---EHH----HHHHHCCCSCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe-------------e---ecc----hhhHhhccCCCEEEEecc
Confidence 57999999999999999999999999999999764421 1 111 122344567888888887
Q ss_pred CCCCCC---CCch--------------------------------------------------------hhHHHHHHHHH
Q 025065 89 PVIFLS---DNPQ--------------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 89 ~~~~~~---~~~~--------------------------------------------------------~~Y~~sK~~~e 109 (258)
..-... .... +.|+..|...|
T Consensus 61 ~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e 140 (298)
T 4b4o_A 61 ENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWE 140 (298)
T ss_dssp CCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHH
T ss_pred CcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHH
Confidence 531111 0000 44666666666
Q ss_pred HHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHHhhcCCCCCce
Q 025065 110 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGR 185 (258)
Q Consensus 110 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~ 185 (258)
... .....+++++++||+.||||+.. ....++.....+. ..++ +.++|+|++|+|+++..+++++...|+
T Consensus 141 ~~~--~~~~~~~~~~~~r~~~v~g~~~~----~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~ 214 (298)
T 4b4o_A 141 AAA--RLPGDSTRQVVVRSGVVLGRGGG----AMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGV 214 (298)
T ss_dssp HHH--CCSSSSSEEEEEEECEEECTTSH----HHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEE
T ss_pred HHH--HhhccCCceeeeeeeeEEcCCCC----chhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCe
Confidence 532 23456899999999999999742 2233344444555 4444 889999999999999999999888888
Q ss_pred EEE-eCCCcCHHHHHHHHHHhCCCC---CCCCCCc---------cCCCCccccCHHHHHhcCCCc--cchhHHHHHHHHH
Q 025065 186 YLL-AGSVAQHSDILKFLREHYPTL---LRSGKLE---------EKYQPTIKVSQERAKSLGINF--TPWEVGVRGCIES 250 (258)
Q Consensus 186 ~~~-~~~~~t~~e~~~~i~~~~~~~---~~~~~~~---------~~~~~~~~~d~~k~~~lg~~p--~~~~~~l~~~~~~ 250 (258)
|++ +++++|+.|+++.+++.+|.. ++|.+.. .....+..++++|++++||++ ++++++|++.++.
T Consensus 215 yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~~ 294 (298)
T 4b4o_A 215 LNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAALKEIAEN 294 (298)
T ss_dssp EEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHHHHHHHC
T ss_pred EEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 855 588999999999999999753 2232211 111235567889998899999 4799999998873
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-33 Score=231.15 Aligned_cols=240 Identities=18% Similarity=0.137 Sum_probs=181.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC-------CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG-------YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV- 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~- 77 (258)
+++|+||||||+||||++|+++|+++| ++|++++|+...... ....++.++.+|+++++.+.+++
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~ 84 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------GFSGAVDARAADLSAPGEAEKLVE 84 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------ccCCceeEEEcCCCCHHHHHHHHh
Confidence 467899999999999999999999999 899999997643211 01246889999999999999998
Q ss_pred CCCcEEEecCCCCCC-CC---------------------------------------------C-C----------chhh
Q 025065 78 DGCDGVFHTASPVIF-LS---------------------------------------------D-N----------PQEW 100 (258)
Q Consensus 78 ~~~d~Vih~a~~~~~-~~---------------------------------------------~-~----------~~~~ 100 (258)
.++|+|||+|+.... .. . . +.+.
T Consensus 85 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~ 164 (342)
T 2hrz_A 85 ARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTS 164 (342)
T ss_dssp TCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSH
T ss_pred cCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcch
Confidence 489999999986421 00 0 0 1157
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc-CCcCCCC--CccHHHHHHHHcCC-CCCC----CCcceeeHHHHHHH
Q 025065 101 YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG-PFFQPIL--NFGAEVILNLINGD-QSFA----FPYIFVEIRDVVYA 172 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G-~~~~~~~--~~~~~~~~~~~~g~-~~~~----~~~~~i~v~D~a~~ 172 (258)
|+.+|.++|.+++.++.+.+++.+++|++.+|| |+..... .....++.....|. ..++ ...+++|++|+|++
T Consensus 165 Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~ 244 (342)
T 2hrz_A 165 YGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGF 244 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHH
Confidence 999999999999999888889999999999998 6543221 12334455556666 2222 45678999999999
Q ss_pred HHHhhcCCC----CCceEEEeCCCcCHHHHHHHHHHhCCCCC--CCCCCc-c-----CCCCccccCHHHHHhcCCCc-cc
Q 025065 173 HIRALEVPK----ASGRYLLAGSVAQHSDILKFLREHYPTLL--RSGKLE-E-----KYQPTIKVSQERAKSLGINF-TP 239 (258)
Q Consensus 173 ~~~~~~~~~----~~~~~~~~~~~~t~~e~~~~i~~~~~~~~--~~~~~~-~-----~~~~~~~~d~~k~~~lg~~p-~~ 239 (258)
++.+++.+. ..++|+++++.+|+.|+++.+.+.+|... .....+ . .......+|++|++.|||+| ++
T Consensus 245 ~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~ 324 (342)
T 2hrz_A 245 LIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARELGFTAESS 324 (342)
T ss_dssp HHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHHHTTCCCCSS
T ss_pred HHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHHHHHcCCCCCCC
Confidence 999998764 24588777888999999999999987432 111111 0 11222368999994499999 99
Q ss_pred hhHHHHHHHHHHH
Q 025065 240 WEVGVRGCIESLM 252 (258)
Q Consensus 240 ~~~~l~~~~~~~~ 252 (258)
++++|+++++|++
T Consensus 325 l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 325 FEEIIQVHIEDEL 337 (342)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999998
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-33 Score=228.13 Aligned_cols=214 Identities=13% Similarity=0.045 Sum_probs=166.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 85 (258)
.++|||||||||||++|+++|+++|++|++++|+. +|+++++.+.++++ ++|+|||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------~Dl~d~~~~~~~~~~~~~d~vih 69 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEKKPNVVIN 69 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc----------------------CCCCCHHHHHHHHHhcCCCEEEE
Confidence 57999999999999999999999999999998851 78999988988887 7999999
Q ss_pred cCCCCCCC--CCCc--------------------------------------------------hhhHHHHHHHHHHHHH
Q 025065 86 TASPVIFL--SDNP--------------------------------------------------QEWYSLAKTLAEEAAW 113 (258)
Q Consensus 86 ~a~~~~~~--~~~~--------------------------------------------------~~~Y~~sK~~~e~~~~ 113 (258)
+|+..... ..++ .+.|+.+|.++|.+++
T Consensus 70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 149 (292)
T 1vl0_A 70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVK 149 (292)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 99864310 0111 1479999999999976
Q ss_pred HHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC-CCcceeeHHHHHHHHHHhhcCCCCCceEEE-e
Q 025065 114 KFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLL-A 189 (258)
Q Consensus 114 ~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~ 189 (258)
.+ +.+++++||+.+||+ .. .....++.....+. ...+ +.++|+|++|+|++++.+++++ ..++|++ +
T Consensus 150 ~~----~~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~i~~ 220 (292)
T 1vl0_A 150 AL----NPKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFHCTC 220 (292)
T ss_dssp HH----CSSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT-CCEEEECCC
T ss_pred hh----CCCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC-CCcEEEecC
Confidence 65 457999999999999 32 22334445555555 2333 6789999999999999999876 5558854 5
Q ss_pred CCCcCHHHHHHHHHHhCCCCC----CCCCCc---cCCCCccccCHHHH-HhcCCCccchhHHHHHHHHHHH
Q 025065 190 GSVAQHSDILKFLREHYPTLL----RSGKLE---EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLM 252 (258)
Q Consensus 190 ~~~~t~~e~~~~i~~~~~~~~----~~~~~~---~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~~~ 252 (258)
++.+|+.|+++.+.+.+|... +|.... ........+|++|+ +.|||+|++++++|+++++|++
T Consensus 221 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~ 291 (292)
T 1vl0_A 221 KGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQ 291 (292)
T ss_dssp BSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCCCHHHHHHHHHHHhc
Confidence 689999999999999987531 222111 12345678999999 6699999999999999999986
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-30 Score=224.17 Aligned_cols=221 Identities=18% Similarity=0.153 Sum_probs=157.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+|+|||||||||||++|+++|+++|++|++++|+..... .+.+|+.+. +.+.+.++|+|||+|
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------------~v~~d~~~~--~~~~l~~~D~Vih~A 209 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------------KRFWDPLNP--ASDLLDGADVLVHLA 209 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------------CEECCTTSC--CTTTTTTCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------------ceeecccch--hHHhcCCCCEEEECC
Confidence 689999999999999999999999999999999875431 255777643 456678899999999
Q ss_pred CCCCCC---CCCch----------------------------------------------------hhHHHHHHHHHHHH
Q 025065 88 SPVIFL---SDNPQ----------------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 88 ~~~~~~---~~~~~----------------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
+..... ...+. +.|+.+|...|.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~ 289 (516)
T 3oh8_A 210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHAT 289 (516)
T ss_dssp CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTT
T ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHH
Confidence 975321 11110 35788899888876
Q ss_pred HHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHHhhcCCCCCceE-E
Q 025065 113 WKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRY-L 187 (258)
Q Consensus 113 ~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~-~ 187 (258)
.. +.+.|++++++||++|||+... ....++..+..|. ..++ +.++|+|++|+|++++.+++++...|.| +
T Consensus 290 ~~-~~~~gi~~~ilRp~~v~Gp~~~----~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni 364 (516)
T 3oh8_A 290 AP-ASDAGKRVAFIRTGVALSGRGG----MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINA 364 (516)
T ss_dssp HH-HHHTTCEEEEEEECEEEBTTBS----HHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred HH-HHhCCCCEEEEEeeEEECCCCC----hHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEE
Confidence 54 5567999999999999999732 2222333333333 3333 6789999999999999999988777877 5
Q ss_pred EeCCCcCHHHHHHHHHHhCCCC---CCCCCCcc----------CCCCccccCHHHHHhcCCCc-cc-hhHHHHHHHHH
Q 025065 188 LAGSVAQHSDILKFLREHYPTL---LRSGKLEE----------KYQPTIKVSQERAKSLGINF-TP-WEVGVRGCIES 250 (258)
Q Consensus 188 ~~~~~~t~~e~~~~i~~~~~~~---~~~~~~~~----------~~~~~~~~d~~k~~~lg~~p-~~-~~~~l~~~~~~ 250 (258)
++++.+|+.|+++.+++.+|.. ++|.+... ....+..++++|++.|||+| ++ ++++|+++++.
T Consensus 365 ~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~ 442 (516)
T 3oh8_A 365 VAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGY 442 (516)
T ss_dssp SCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHTC
T ss_pred ECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHHhCc
Confidence 5678999999999999988743 22322111 11235567889998899999 65 99999999874
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=211.85 Aligned_cols=224 Identities=16% Similarity=0.137 Sum_probs=160.8
Q ss_pred EEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 10 VVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+|||||||||||++++++|+++ |++|++++|++.+.. .+. ..+++++.+|++|++++.++++++|+|||+|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 73 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ--ALA-----AQGITVRQADYGDEAALTSALQGVEKLLLIS 73 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH--HHH-----HTTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh--hhh-----cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence 4899999999999999999998 999999999765431 111 1367899999999999999999999999999
Q ss_pred CCCCCCCCCch---------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC
Q 025065 88 SPVIFLSDNPQ---------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL 140 (258)
Q Consensus 88 ~~~~~~~~~~~---------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~ 140 (258)
+.......... ..|+.+|..+|++++. ++++++++||+.++++...
T Consensus 74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~~--- 146 (286)
T 2zcu_A 74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLAD----SGIVYTLLRNGWYSENYLA--- 146 (286)
T ss_dssp --------CHHHHHHHHHHHHTCCEEEEEEETTTTTCCSTTHHHHHHHHHHHHH----HCSEEEEEEECCBHHHHHT---
T ss_pred CCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCcchhHHHHHHHHHHHHH----cCCCeEEEeChHHhhhhHH---
Confidence 86311000000 4699999999998653 5899999999877665321
Q ss_pred CccHHHHHHHH-cCCCCCC---CCcceeeHHHHHHHHHHhhcCCCCCc-eEEEe-CCCcCHHHHHHHHHHhCCCCC----
Q 025065 141 NFGAEVILNLI-NGDQSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RYLLA-GSVAQHSDILKFLREHYPTLL---- 210 (258)
Q Consensus 141 ~~~~~~~~~~~-~g~~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~t~~e~~~~i~~~~~~~~---- 210 (258)
++.+.. .+...++ ..++|+|++|+|++++.+++++...| .|+++ ++.+|+.|+++.+.+.+|...
T Consensus 147 -----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~ 221 (286)
T 2zcu_A 147 -----SAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQN 221 (286)
T ss_dssp -----THHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEE
T ss_pred -----HhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCceee
Confidence 122222 2322222 77899999999999999998865444 78555 569999999999999987531
Q ss_pred CCCCCcc------CC----------------CCccccCHHHH-HhcCCCccchhHHHHHHHHHHH
Q 025065 211 RSGKLEE------KY----------------QPTIKVSQERA-KSLGINFTPWEVGVRGCIESLM 252 (258)
Q Consensus 211 ~~~~~~~------~~----------------~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~~~ 252 (258)
+|..... .. ......|++++ +.|||++++++++|+++++|+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 222 LSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHLFNVNN 286 (286)
T ss_dssp CCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCCCHHHHHHGGGC---
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCCCHHHHHHHHHhhcC
Confidence 1211000 00 11255678899 6799866999999999998873
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-29 Score=198.64 Aligned_cols=173 Identities=27% Similarity=0.274 Sum_probs=136.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
||+||||||+||||++|+++|+++|++|++++|++++... . ..+++++.+|++|++++.++++++|+|||+|
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 75 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-----E---NEHLKVKKADVSSLDEVCEVCKGADAVISAF 75 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-----C---CTTEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-----c---cCceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence 5799999999999999999999999999999998654321 1 2578999999999999999999999999999
Q ss_pred CCCCCCCCCch----------------------------------------------hhHHHHHHHHHHHHHHHHHHcCC
Q 025065 88 SPVIFLSDNPQ----------------------------------------------EWYSLAKTLAEEAAWKFAKENGI 121 (258)
Q Consensus 88 ~~~~~~~~~~~----------------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~ 121 (258)
+.......... +.|+.+|..+|.+++.+.+++++
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~ 155 (227)
T 3dhn_A 76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEI 155 (227)
T ss_dssp CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSS
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCc
Confidence 87422111100 57999999999998888878899
Q ss_pred cEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEeCCCcCHH
Q 025065 122 DLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLAGSVAQHS 196 (258)
Q Consensus 122 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~~~~~t~~ 196 (258)
+++++||+.+||++....... ..+. +..+ ..++|+|++|+|++++.+++++...| +| +.++++.++.
T Consensus 156 ~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~ 226 (227)
T 3dhn_A 156 DWVFFSPAADMRPGVRTGRYR--------LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH 226 (227)
T ss_dssp EEEEEECCSEEESCCCCCCCE--------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC--
T ss_pred cEEEEeCCcccCCCcccccee--------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcccC
Confidence 999999999999976543211 1222 2223 55899999999999999999998767 77 6668888775
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-30 Score=211.00 Aligned_cols=222 Identities=15% Similarity=0.129 Sum_probs=164.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
|+|||||||||||++++++|+++ |++|++++|++.+.. .+. ..+++++.+|++|++.+.++++++|+|||+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~l~-----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 73 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS--TLA-----DQGVEVRHGDYNQPESLQKAFAGVSKLLFI 73 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH--HHH-----HTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh--HHh-----hcCCeEEEeccCCHHHHHHHHhcCCEEEEc
Confidence 46999999999999999999998 999999999764431 111 136789999999999999999999999999
Q ss_pred CCCCCCCCCCch-----------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcC
Q 025065 87 ASPVIFLSDNPQ-----------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQ 137 (258)
Q Consensus 87 a~~~~~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~ 137 (258)
|+.......+.. ..|+.+|..+|++++ +++++++++||+.++|+...
T Consensus 74 a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~~K~~~E~~~~----~~~~~~~ilrp~~~~~~~~~ 149 (287)
T 2jl1_A 74 SGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIR----TTNIPYTFLRNALYTDFFVN 149 (287)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCCSTHHHHHHHHHHHHH----HTTCCEEEEEECCBHHHHSS
T ss_pred CCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCCchHHHHHHHHHHHH----HcCCCeEEEECCEeccccch
Confidence 986311000000 369999999999864 46999999999998886422
Q ss_pred CCCCccHHHHHHHH-cCCCCC--C-CCcceeeHHHHHHHHHHhhcCCCCCc-eEEEe-CCCcCHHHHHHHHHHhCCCCC-
Q 025065 138 PILNFGAEVILNLI-NGDQSF--A-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLA-GSVAQHSDILKFLREHYPTLL- 210 (258)
Q Consensus 138 ~~~~~~~~~~~~~~-~g~~~~--~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~t~~e~~~~i~~~~~~~~- 210 (258)
. . +.... .+...+ + ..++|+|++|+|++++.+++++...| +|+++ ++.+|+.|+++.+.+.+|...
T Consensus 150 ~---~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 222 (287)
T 2jl1_A 150 E---G----LRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVV 222 (287)
T ss_dssp G---G----GHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCCE
T ss_pred h---h----HHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcce
Confidence 1 1 22222 333222 3 77899999999999999998865455 78555 679999999999999987531
Q ss_pred ---CCCCCcc------CC----------------CCccccCHHHH-HhcCCCccchhHHHHHHHH
Q 025065 211 ---RSGKLEE------KY----------------QPTIKVSQERA-KSLGINFTPWEVGVRGCIE 249 (258)
Q Consensus 211 ---~~~~~~~------~~----------------~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~ 249 (258)
+|..... .. ......|++++ +.|| .+++++++++++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 223 HQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-SLTPLKETVKQALK 286 (287)
T ss_dssp EEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS-SCCCHHHHHHHHHT
T ss_pred EEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC-CCCCHHHHHHHHhc
Confidence 1111000 00 12456788999 7799 55999999999875
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=216.90 Aligned_cols=245 Identities=14% Similarity=0.143 Sum_probs=172.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhh----cc------ccCcCCcEEEEEccCCCcccHH
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHL----RE------LDGATERLHLFKANLLEEGSFD 74 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~----~~------~~~~~~~~~~~~~Dl~~~~~~~ 74 (258)
+.+|+|||||||||||++|+++|+++|++|++++|+...... ..+ .. ......++.++.+|+++++.+.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 356899999999999999999999999999999998763211 111 00 0001357999999999988888
Q ss_pred HHhCCCcEEEecCCCCCCCC--------------------------------------------------------CCch
Q 025065 75 SAVDGCDGVFHTASPVIFLS--------------------------------------------------------DNPQ 98 (258)
Q Consensus 75 ~~~~~~d~Vih~a~~~~~~~--------------------------------------------------------~~~~ 98 (258)
.+.++|+|||+|+...... ..+.
T Consensus 147 -~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~ 225 (427)
T 4f6c_A 147 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLT 225 (427)
T ss_dssp -CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCCC
T ss_pred -CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHhCCCccCCCCCccccccccccCCCCC
Confidence 7778999999998753110 0022
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC------CccHHHHHHHHcCC-CCC--C-CCcceeeHHH
Q 025065 99 EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL------NFGAEVILNLINGD-QSF--A-FPYIFVEIRD 168 (258)
Q Consensus 99 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~------~~~~~~~~~~~~g~-~~~--~-~~~~~i~v~D 168 (258)
+.|+.+|.++|.+++.+. +.|++++++||++|||+...... .....++.....+. ... + ..++|+|++|
T Consensus 226 ~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 304 (427)
T 4f6c_A 226 SPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDT 304 (427)
T ss_dssp SHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHH
T ss_pred CchHHHHHHHHHHHHHHH-HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHH
Confidence 579999999999999875 46999999999999999866431 11334455555544 221 1 7889999999
Q ss_pred HHHHHHHhhcCCCCCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCC--CCc---c-------------CCCCccccCHHH
Q 025065 169 VVYAHIRALEVPKASGRYLL-AGSVAQHSDILKFLREHYPTLLRSG--KLE---E-------------KYQPTIKVSQER 229 (258)
Q Consensus 169 ~a~~~~~~~~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~--~~~---~-------------~~~~~~~~d~~k 229 (258)
+|++++.++..+..+++|++ +++++++.|+++.+.+ ++...++. +.. . .......+|+++
T Consensus 305 vA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~ 383 (427)
T 4f6c_A 305 TARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTL 383 (427)
T ss_dssp HHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEECHHHHHHHHHHTTCHHHHHHHHHHHTSEECEECCHH
T ss_pred HHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCcccCHHHHHHHHHhcCchhhhhhhhccccCCceeccHHH
Confidence 99999999998775558855 5789999999999998 45111111 000 0 122345677666
Q ss_pred H----HhcCCCccch-hHHHHHHHHHHHH
Q 025065 230 A----KSLGINFTPW-EVGVRGCIESLME 253 (258)
Q Consensus 230 ~----~~lg~~p~~~-~~~l~~~~~~~~~ 253 (258)
+ +.+||+++++ ++.+++++++++.
T Consensus 384 ~~~~l~~~G~~~~~~~~~~l~~~~~~l~~ 412 (427)
T 4f6c_A 384 TLKIMNHISEKWPTITNNWLYHWAQYIKT 412 (427)
T ss_dssp HHHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 5 4479998444 5589999988876
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=221.59 Aligned_cols=244 Identities=15% Similarity=0.148 Sum_probs=174.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhh----cc------ccCcCCcEEEEEccCCCcccHHH
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHL----RE------LDGATERLHLFKANLLEEGSFDS 75 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~----~~------~~~~~~~~~~~~~Dl~~~~~~~~ 75 (258)
.+|+|||||||||||++|+++|.++|++|++++|+...... ..+ .. ......++.++.+|+++++.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 35899999999999999999999899999999998763211 000 00 0011358999999999988887
Q ss_pred HhCCCcEEEecCCCCCCCC--------------------------------------------------------CCchh
Q 025065 76 AVDGCDGVFHTASPVIFLS--------------------------------------------------------DNPQE 99 (258)
Q Consensus 76 ~~~~~d~Vih~a~~~~~~~--------------------------------------------------------~~~~~ 99 (258)
...++|+|||+|+...... ..+.+
T Consensus 228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~ 307 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTS 307 (508)
T ss_dssp CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCS
T ss_pred CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhhccCCccCCcCcccccccccccccCCC
Confidence 6778999999998643100 00125
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC------CccHHHHHHHHcCC-CCC--C-CCcceeeHHHH
Q 025065 100 WYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL------NFGAEVILNLINGD-QSF--A-FPYIFVEIRDV 169 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~------~~~~~~~~~~~~g~-~~~--~-~~~~~i~v~D~ 169 (258)
.|+.+|..+|++++.+. +.|++++++||++|||+...... .....++.....+. ... + ..++|+|++|+
T Consensus 308 ~Y~~sK~~~E~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~Dv 386 (508)
T 4f6l_B 308 PYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTT 386 (508)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHH
T ss_pred cHHHHHHHHHHHHHHHH-HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHH
Confidence 79999999999999875 46999999999999999866531 11334455555544 222 2 78899999999
Q ss_pred HHHHHHhhcCCCCCceEE-EeCCCcCHHHHHHHHHHhCCCCCCC--CCCc----------------cCCCCccccCHHHH
Q 025065 170 VYAHIRALEVPKASGRYL-LAGSVAQHSDILKFLREHYPTLLRS--GKLE----------------EKYQPTIKVSQERA 230 (258)
Q Consensus 170 a~~~~~~~~~~~~~~~~~-~~~~~~t~~e~~~~i~~~~~~~~~~--~~~~----------------~~~~~~~~~d~~k~ 230 (258)
|++++.++.++..+++|+ .+++.+++.|+++.+.+.. ...++ .+.. ........+|++++
T Consensus 387 A~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 465 (508)
T 4f6l_B 387 ARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLT 465 (508)
T ss_dssp HHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSEECEECCHHH
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCccchhcccccccCcceecchHHH
Confidence 999999999877555884 5578999999999999764 11111 1100 11223556776665
Q ss_pred ----HhcCCCc-cchhHHHHHHHHHHHH
Q 025065 231 ----KSLGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 231 ----~~lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
+.+||.+ ...++.++++++|++.
T Consensus 466 ~~~l~~~G~~~~~~~~~~l~~~~~~~~~ 493 (508)
T 4f6l_B 466 LKIMNHISEKWPTITNNWLYHWAQYIKT 493 (508)
T ss_dssp HHHHHHHSCCCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence 4579998 5557788999888875
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=212.50 Aligned_cols=239 Identities=13% Similarity=0.094 Sum_probs=162.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC--CCc
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD--GCD 81 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d 81 (258)
|++|+|||||||||||++|+++|+++|++|++++|+++.... ..+..+. ..+++++.+|++|.+++.++++ ++|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d 85 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEID 85 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCC
Confidence 556799999999999999999999999999999998743211 1111111 2578999999999999999999 999
Q ss_pred EEEecCCCCCC------------------------CC----C---CchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 82 GVFHTASPVIF------------------------LS----D---NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 82 ~Vih~a~~~~~------------------------~~----~---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
+|||+++.... .. . .+.+.|+.+|..+|++++ +.|++++++||+.
T Consensus 86 ~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~----~~g~~~tivrpg~ 161 (346)
T 3i6i_A 86 IVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVE----ESGIPFTYICCNS 161 (346)
T ss_dssp EEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHHHH----HTTCCBEEEECCE
T ss_pred EEEECCchhhHHHHHHHHHHHHHcCCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHHHH----HcCCCEEEEEecc
Confidence 99999986210 00 0 112689999999999865 4699999999999
Q ss_pred cccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc-eEEEe--CCCcCHHHHHHHH
Q 025065 131 VIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RYLLA--GSVAQHSDILKFL 202 (258)
Q Consensus 131 v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~--~~~~t~~e~~~~i 202 (258)
++|........ .......+. ..++ ..++|+|++|+|++++.++.++...+ .|+.. ++.+|+.|+++.+
T Consensus 162 ~~g~~~~~~~~----~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~ 237 (346)
T 3i6i_A 162 IASWPYYNNIH----PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVW 237 (346)
T ss_dssp ESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHH
T ss_pred cccccCccccc----cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHH
Confidence 99976432211 010111222 2232 68899999999999999999876544 55443 6899999999999
Q ss_pred HHhCCCCCCCCCCc--------cCC--C---------------CccccCH-----HHH-Hh-cCCCccchhHHHHHHHHH
Q 025065 203 REHYPTLLRSGKLE--------EKY--Q---------------PTIKVSQ-----ERA-KS-LGINFTPWEVGVRGCIES 250 (258)
Q Consensus 203 ~~~~~~~~~~~~~~--------~~~--~---------------~~~~~d~-----~k~-~~-lg~~p~~~~~~l~~~~~~ 250 (258)
.+.+|......... ... + ....++. .++ +. -+++++++++.++++++|
T Consensus 238 ~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t~~~e~l~~~~~~ 317 (346)
T 3i6i_A 238 EKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFRTVEECFGEYIVK 317 (346)
T ss_dssp HHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCCCHHHHHHHHHCC
T ss_pred HHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCcCcHHHHHHHHHHH
Confidence 99987532110011 000 0 0011222 223 33 378889999999999999
Q ss_pred HHHc
Q 025065 251 LMEK 254 (258)
Q Consensus 251 ~~~~ 254 (258)
++++
T Consensus 318 ~~~~ 321 (346)
T 3i6i_A 318 MEEK 321 (346)
T ss_dssp ----
T ss_pred hhcc
Confidence 8765
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=209.95 Aligned_cols=196 Identities=15% Similarity=0.192 Sum_probs=151.7
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHC-CC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQR-GY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
.+++|+|||||||||||++|+++|+++ |+ +|++++|++.+... ....+. ..++.++.+|++|.+.+.++++++|+
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~-~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~D~ 94 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSE-MAMEFN--DPRMRFFIGDVRDLERLNYALEGVDI 94 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHH-HHHHHC--CTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHH-HHHHhc--CCCEEEEECCCCCHHHHHHHHhcCCE
Confidence 356789999999999999999999999 97 99999997533211 011111 24789999999999999999999999
Q ss_pred EEecCCCCCCC--CCCch-------------------------------------hhHHHHHHHHHHHHHHHHHH---cC
Q 025065 83 VFHTASPVIFL--SDNPQ-------------------------------------EWYSLAKTLAEEAAWKFAKE---NG 120 (258)
Q Consensus 83 Vih~a~~~~~~--~~~~~-------------------------------------~~Y~~sK~~~e~~~~~~~~~---~~ 120 (258)
|||+||..... ..++. +.|+.+|.++|.+++.+..+ .+
T Consensus 95 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~g 174 (344)
T 2gn4_A 95 CIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQ 174 (344)
T ss_dssp EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHHHHHHHHHHGGGCCCSSC
T ss_pred EEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999975421 11111 67999999999999887653 58
Q ss_pred CcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CC-C--C-CCcceeeHHHHHHHHHHhhcCCCCCceEEEeCCCcCH
Q 025065 121 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QS-F--A-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQH 195 (258)
Q Consensus 121 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~-~--~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~t~ 195 (258)
++++++||++|||+... ..+.++..+..|. ++ + + ..++|+|++|+|++++.+++++..+.+|++++..+|+
T Consensus 175 ~~~~~vRpg~v~g~~~~----~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g~~~~~~~~~~s~ 250 (344)
T 2gn4_A 175 TQFSVVRYGNVVGSRGS----VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKM 250 (344)
T ss_dssp CEEEEECCCEETTCTTS----HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSSCEEEECCCEEEH
T ss_pred cEEEEEEeccEECCCCC----HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCCCEEecCCCcEEH
Confidence 99999999999998632 2344455555564 21 1 2 5688999999999999999886544488888778999
Q ss_pred HHHHHHHHHhCC
Q 025065 196 SDILKFLREHYP 207 (258)
Q Consensus 196 ~e~~~~i~~~~~ 207 (258)
.|+++.+.+.++
T Consensus 251 ~el~~~i~~~~~ 262 (344)
T 2gn4_A 251 TDLAKALAPNTP 262 (344)
T ss_dssp HHHHHHHCTTCC
T ss_pred HHHHHHHHHhCC
Confidence 999999987653
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-28 Score=199.50 Aligned_cols=223 Identities=15% Similarity=0.162 Sum_probs=156.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
|+|||||||||||++++++|.++ |++|++++|++++... +. ..+++++.+|++|++.+.++++++|+|||+|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~--~~-----~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a 73 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD--DW-----RGKVSVRQLDYFNQESMVEAFKGMDTVVFIP 73 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG--GG-----BTTBEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH--hh-----hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence 46999999999999999999998 8999999998754321 11 2578999999999999999999999999999
Q ss_pred CCCCCCCCCch----------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCC
Q 025065 88 SPVIFLSDNPQ----------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPI 139 (258)
Q Consensus 88 ~~~~~~~~~~~----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~ 139 (258)
+.......+.. ++|..++... .++...++.|++++++||+.+||+..
T Consensus 74 ~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~~~~~~~~~--~~e~~~~~~g~~~~ilrp~~~~~~~~--- 148 (289)
T 3e48_A 74 SIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFG--YASRLLSTSGIDYTYVRMAMYMDPLK--- 148 (289)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCCSTTHHHHH--HHHHHHHHHCCEEEEEEECEESTTHH---
T ss_pred CCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCCCccchhHH--HHHHHHHHcCCCEEEEeccccccccH---
Confidence 87432110000 3344444321 22333456799999999999999742
Q ss_pred CCccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc-eEEEeCCCcCHHHHHHHHHHhCCCCC----
Q 025065 140 LNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGSVAQHSDILKFLREHYPTLL---- 210 (258)
Q Consensus 140 ~~~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~t~~e~~~~i~~~~~~~~---- 210 (258)
.++.....+. ..++ ..++|+|++|+|++++.++.++...| +|+++++.+|+.|+++.+.+.+|...
T Consensus 149 -----~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~ 223 (289)
T 3e48_A 149 -----PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKELAAILSEASGTEIKYEP 223 (289)
T ss_dssp -----HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEECCEEEEHHHHHHHHHHHHTSCCEECC
T ss_pred -----HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeCCCcCCHHHHHHHHHHHHCCceeEEe
Confidence 1233333333 3333 77899999999999999999876545 78555999999999999999987531
Q ss_pred CCCCCc-----c--------------CCCCccccCHHHH-HhcCCCccchhHHHHHHH
Q 025065 211 RSGKLE-----E--------------KYQPTIKVSQERA-KSLGINFTPWEVGVRGCI 248 (258)
Q Consensus 211 ~~~~~~-----~--------------~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~ 248 (258)
++.... . ........+.+.+ +.+|++|+++++.+++.-
T Consensus 224 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~~~~~~~~~~ 281 (289)
T 3e48_A 224 VSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQTLQSFLQENI 281 (289)
T ss_dssp CCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCCCHHHHHHC--
T ss_pred CCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCCCHHHHHHHHH
Confidence 111000 0 0111222445556 778999999999887653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=199.35 Aligned_cols=208 Identities=21% Similarity=0.197 Sum_probs=155.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih~ 86 (258)
|+||||||+||||++++++|+ +|++|++++|++... ++ +.+|+++++++.+++++ +|+|||+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~ 64 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ------------GG---YKLDLTDFPRLEDFIIKKRPDVIINA 64 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT------------TC---EECCTTSHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC------------CC---ceeccCCHHHHHHHHHhcCCCEEEEC
Confidence 369999999999999999999 589999999976321 12 78999999999999876 9999999
Q ss_pred CCCCCCC--CCCch-------------------------------------------------hhHHHHHHHHHHHHHHH
Q 025065 87 ASPVIFL--SDNPQ-------------------------------------------------EWYSLAKTLAEEAAWKF 115 (258)
Q Consensus 87 a~~~~~~--~~~~~-------------------------------------------------~~Y~~sK~~~e~~~~~~ 115 (258)
|+..... ..+.. +.|+.+|.++|.+++.
T Consensus 65 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~- 143 (273)
T 2ggs_A 65 AAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ- 143 (273)
T ss_dssp CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC-
T ss_pred CcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC-
Confidence 9975321 00110 3699999999998654
Q ss_pred HHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCC--CCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeCCCc
Q 025065 116 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ--SFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVA 193 (258)
Q Consensus 116 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~ 193 (258)
++++++||+.+||+. .....++.....+.. ..+..++++|++|+|++++.+++++. .|+|+++++.+
T Consensus 144 -----~~~~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~-~g~~~i~~~~~ 212 (273)
T 2ggs_A 144 -----DDSLIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRK-TGIIHVAGERI 212 (273)
T ss_dssp -----TTCEEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTC-CEEEECCCCCE
T ss_pred -----CCeEEEecccccccc-----HHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCc-CCeEEECCCcc
Confidence 688999999999821 222233344445542 11136789999999999999998764 56886656889
Q ss_pred CHHHHHHHHHHhCCCCCC---CCC---CccCCCCccccCHHHH-HhcCCCc--cchhHHH
Q 025065 194 QHSDILKFLREHYPTLLR---SGK---LEEKYQPTIKVSQERA-KSLGINF--TPWEVGV 244 (258)
Q Consensus 194 t~~e~~~~i~~~~~~~~~---~~~---~~~~~~~~~~~d~~k~-~~lg~~p--~~~~~~l 244 (258)
|+.|+++.+.+.+|.... +.. .......+..+|++|+ +.|||+| +++++++
T Consensus 213 s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 213 SRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp EHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred cHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 999999999999975421 111 1122345678999999 6799999 6888875
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=187.20 Aligned_cols=167 Identities=16% Similarity=0.143 Sum_probs=135.2
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC-cccHHHHhCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~Vih~a 87 (258)
|+||||||+||||++++++|+++|++|++++|++.+... ..+++++++|++| ++++.++++++|+|||+|
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------CTTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------cCCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 479999999999999999999999999999998654321 1478999999999 999999999999999999
Q ss_pred CCCCCCC--CCch---------------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 88 SPVIFLS--DNPQ---------------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 88 ~~~~~~~--~~~~---------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
+...... .+.. +.|+.+|.++|++++ +..+++++++
T Consensus 72 g~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~---~~~~i~~~il 148 (219)
T 3dqp_A 72 GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLT---KETNLDYTII 148 (219)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHH---HSCCCEEEEE
T ss_pred cCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHH---hccCCcEEEE
Confidence 9854221 1111 369999999999975 5679999999
Q ss_pred cCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEeCCCcCHHHHHHH
Q 025065 127 HPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGSVAQHSDILKF 201 (258)
Q Consensus 127 Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~t~~e~~~~ 201 (258)
||+.+||+....... .+. ..+++++++|+|++++.+++++...| +|++++...++.|+.+.
T Consensus 149 rp~~v~g~~~~~~~~----------~~~----~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~~~~~e~~~~ 210 (219)
T 3dqp_A 149 QPGALTEEEATGLID----------IND----EVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALES 210 (219)
T ss_dssp EECSEECSCCCSEEE----------ESS----SCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECSEEHHHHHHT
T ss_pred eCceEecCCCCCccc----------cCC----CcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCCccHHHHHHH
Confidence 999999986443211 112 67889999999999999999987655 78776556999988764
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=205.98 Aligned_cols=200 Identities=17% Similarity=0.156 Sum_probs=146.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC---CCEEEEEEcCCCCccc-hhhccccC-------------cCCcEEEEEccCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR---GYTVKATVRDPNSPKT-EHLRELDG-------------ATERLHLFKANLL 68 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~-~~~~~~~~-------------~~~~~~~~~~Dl~ 68 (258)
.++|+|||||||||||++|+++|+++ |++|++++|+...... ..+..... ...++.++.+|++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 46789999999999999999999998 8999999998754321 11111100 1257999999998
Q ss_pred ------CcccHHHHhCCCcEEEecCCCCCCCCCCch--------------------------------------------
Q 025065 69 ------EEGSFDSAVDGCDGVFHTASPVIFLSDNPQ-------------------------------------------- 98 (258)
Q Consensus 69 ------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~-------------------------------------------- 98 (258)
+.+.+.++++++|+|||+|+..+.......
T Consensus 151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~ 230 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDA 230 (478)
T ss_dssp SGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSS
T ss_pred CcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcc
Confidence 556788888999999999998654111110
Q ss_pred -----hh-----------HHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC----CccHHHHHHHH-cCC-CC
Q 025065 99 -----EW-----------YSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL----NFGAEVILNLI-NGD-QS 156 (258)
Q Consensus 99 -----~~-----------Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~-~g~-~~ 156 (258)
++ |+.+|..+|.+++.++++.|++++++||++|||+....+. .....++.... .|. +.
T Consensus 231 ~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~ 310 (478)
T 4dqv_A 231 DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPR 310 (478)
T ss_dssp CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEES
T ss_pred cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccc
Confidence 11 9999999999999998888999999999999998652221 11222333222 233 21
Q ss_pred C----------C-CCcceeeHHHHHHHHHHhhcC----CCC-CceEEEe-CCC--cCHHHHHHHHHHh
Q 025065 157 F----------A-FPYIFVEIRDVVYAHIRALEV----PKA-SGRYLLA-GSV--AQHSDILKFLREH 205 (258)
Q Consensus 157 ~----------~-~~~~~i~v~D~a~~~~~~~~~----~~~-~~~~~~~-~~~--~t~~e~~~~i~~~ 205 (258)
. + ..++|+|++|+|++++.++.+ +.. .++|+++ ++. +|+.|+++.+.+.
T Consensus 311 ~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 311 SFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp CSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred cccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 1 1 467999999999999999876 333 3488554 666 9999999999996
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8.9e-28 Score=202.98 Aligned_cols=174 Identities=20% Similarity=0.184 Sum_probs=141.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
|||||||||||||++|+++|+++|+ +|++++|+ ++++++.++++++|+|||+|
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------~d~~~l~~~~~~~d~Vih~a 54 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------TKEEELESALLKADFIVHLA 54 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------CCHHHHHHHHHHCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------CCHHHHHHHhccCCEEEECC
Confidence 4799999999999999999999998 88776653 45677888888899999999
Q ss_pred CCCCCCCCC------ch-----------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccc
Q 025065 88 SPVIFLSDN------PQ-----------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVI 132 (258)
Q Consensus 88 ~~~~~~~~~------~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~ 132 (258)
+........ .. +.|+.+|.++|++++.++++.+++++++||+++|
T Consensus 55 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~ 134 (369)
T 3st7_A 55 GVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLF 134 (369)
T ss_dssp CSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCCCCchHHHHHHHHHHHHHHHHhCCCEEEEECCcee
Confidence 875432110 00 6899999999999999999899999999999999
Q ss_pred cCCcCCCCC-ccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHHhhcCCCC--CceE-EEeCCCcCHHHHHHHHHH
Q 025065 133 GPFFQPILN-FGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIRALEVPKA--SGRY-LLAGSVAQHSDILKFLRE 204 (258)
Q Consensus 133 G~~~~~~~~-~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~~~~~~~~--~~~~-~~~~~~~t~~e~~~~i~~ 204 (258)
|++..+... ....++..+..+. ..++ ..++|+|++|+|++++.+++++.. .++| +.+++.+|+.|+++.+.+
T Consensus 135 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~ 214 (369)
T 3st7_A 135 GKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYK 214 (369)
T ss_dssp CTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHH
T ss_pred CCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHH
Confidence 998765432 3455566666776 2222 778999999999999999999876 4588 555789999999999999
Q ss_pred hCCC
Q 025065 205 HYPT 208 (258)
Q Consensus 205 ~~~~ 208 (258)
.+|.
T Consensus 215 ~~g~ 218 (369)
T 3st7_A 215 FKQS 218 (369)
T ss_dssp HHHH
T ss_pred HhCC
Confidence 8864
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-27 Score=186.58 Aligned_cols=174 Identities=20% Similarity=0.213 Sum_probs=133.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcE-EEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL-HLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+++|+||||||||+||++++++|+++|++|++++|++++.. .+. ..++ +++++|++ +.+.+.+.++|+||
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~--~~~-----~~~~~~~~~~Dl~--~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP--ELR-----ERGASDIVVANLE--EDFSHAFASIDAVV 89 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH--HHH-----HTTCSEEEECCTT--SCCGGGGTTCSEEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHH--HHH-----hCCCceEEEcccH--HHHHHHHcCCCEEE
Confidence 56799999999999999999999999999999999865431 111 1367 89999999 77888999999999
Q ss_pred ecCCCCCCCCCCch-----------------------------------------hhHHHHHHHHHHHHHHHHHHcCCcE
Q 025065 85 HTASPVIFLSDNPQ-----------------------------------------EWYSLAKTLAEEAAWKFAKENGIDL 123 (258)
Q Consensus 85 h~a~~~~~~~~~~~-----------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~ 123 (258)
|+|+.......... +.|+.+|.++|.+++ +.++++
T Consensus 90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~----~~gi~~ 165 (236)
T 3e8x_A 90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK----RSSLDY 165 (236)
T ss_dssp ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH----HSSSEE
T ss_pred ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH----HCCCCE
Confidence 99997542110000 479999999999864 679999
Q ss_pred EEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEeCCCcCHHHHHHHH
Q 025065 124 VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAGSVAQHSDILKFL 202 (258)
Q Consensus 124 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~t~~e~~~~i 202 (258)
+++||+.+||+......... ..+ +..++++|++|+|++++.+++++...| .|++++...++.|+++.+
T Consensus 166 ~~lrpg~v~~~~~~~~~~~~-------~~~----~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~~~~e~~~~i 234 (236)
T 3e8x_A 166 TIVRPGPLSNEESTGKVTVS-------PHF----SEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKVVEQL 234 (236)
T ss_dssp EEEEECSEECSCCCSEEEEE-------SSC----SCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECSEEHHHHHHTC
T ss_pred EEEeCCcccCCCCCCeEEec-------cCC----CcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCCCcCHHHHHHHh
Confidence 99999999998643221100 011 145889999999999999999986555 786655579999999876
Q ss_pred H
Q 025065 203 R 203 (258)
Q Consensus 203 ~ 203 (258)
+
T Consensus 235 ~ 235 (236)
T 3e8x_A 235 G 235 (236)
T ss_dssp -
T ss_pred c
Confidence 5
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-27 Score=190.39 Aligned_cols=185 Identities=18% Similarity=0.158 Sum_probs=142.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
||+||||||+||||++|+++|+++|++|++++|++.... ..++.++.+|+++++.+.++++++|+|||+|
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 71 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------EAHEEIVACDLADAQAVHDLVKDCDGIIHLG 71 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------CTTEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------CCCccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence 468999999999999999999999999999999765321 1357899999999999999999999999999
Q ss_pred CCCCCCCCCc--------------------------------------------------hhhHHHHHHHHHHHHHHHHH
Q 025065 88 SPVIFLSDNP--------------------------------------------------QEWYSLAKTLAEEAAWKFAK 117 (258)
Q Consensus 88 ~~~~~~~~~~--------------------------------------------------~~~Y~~sK~~~e~~~~~~~~ 117 (258)
+......... .+.|+.+|..+|.+++.+.+
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~ 151 (267)
T 3ay3_A 72 GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH 151 (267)
T ss_dssp SCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 8752111000 03699999999999999888
Q ss_pred HcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCC-ceEEEeCCCcCHH
Q 025065 118 ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKAS-GRYLLAGSVAQHS 196 (258)
Q Consensus 118 ~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~~~~~~~~~t~~ 196 (258)
+++++++++||+.+|+... .. . ..++|+|++|+|++++.+++++... ++|+..++.
T Consensus 152 ~~gi~~~~lrp~~v~~~~~------~~----~---------~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~---- 208 (267)
T 3ay3_A 152 KFDIETLNIRIGSCFPKPK------DA----R---------MMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN---- 208 (267)
T ss_dssp TTCCCEEEEEECBCSSSCC------SH----H---------HHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC----
T ss_pred HcCCCEEEEeceeecCCCC------CC----C---------eeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc----
Confidence 8899999999999994321 00 0 2356999999999999999987543 355443210
Q ss_pred HHHHHHHHhCCCCCCCCCCccCCCCccccCHHHHHhcCCCc-cchhHHHHHHHH
Q 025065 197 DILKFLREHYPTLLRSGKLEEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIE 249 (258)
Q Consensus 197 e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~ 249 (258)
.....|..+++.+||+| ++++++++++.+
T Consensus 209 ------------------------~~~~~d~~~~~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 209 ------------------------TESWWDNDKSAFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp ------------------------SSCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred ------------------------cccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 11224555566799999 899999998765
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-27 Score=192.27 Aligned_cols=226 Identities=15% Similarity=0.150 Sum_probs=159.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
+|+||||||||+||++++++|+++| ++|++++|++.......+. ..+++++.+|++|++++.++++++|+|||+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-----LQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-----HTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-----HCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 5789999999999999999999998 9999999987553211111 146889999999999999999999999999
Q ss_pred CCCCCCCCCC--c----------------------------------hhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 87 ASPVIFLSDN--P----------------------------------QEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 87 a~~~~~~~~~--~----------------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
++........ . ...|+.+|..+|++++. .|++++++||+.
T Consensus 80 a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~ 155 (299)
T 2wm3_A 80 TNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD----IGVPMTSVRLPC 155 (299)
T ss_dssp CCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH----HTCCEEEEECCE
T ss_pred CCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH----CCCCEEEEeecH
Confidence 9752110000 0 03689999999998653 589999999999
Q ss_pred cccCCcCCCCCccHHHHHHHHcCC---CCC--C-CCcceeeHHHHHHHHHHhhcCCC--CCceEEEeCCCcCHHHHHHHH
Q 025065 131 VIGPFFQPILNFGAEVILNLINGD---QSF--A-FPYIFVEIRDVVYAHIRALEVPK--ASGRYLLAGSVAQHSDILKFL 202 (258)
Q Consensus 131 v~G~~~~~~~~~~~~~~~~~~~g~---~~~--~-~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~~~~t~~e~~~~i 202 (258)
+||+........ ....|. ..+ + ..++|+|++|+|+++..++.++. .+..|+++++.+|+.|+++.+
T Consensus 156 ~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g~~~s~~e~~~~~ 229 (299)
T 2wm3_A 156 YFENLLSHFLPQ------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALL 229 (299)
T ss_dssp EGGGGGTTTCCE------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCSEEECHHHHHHHH
T ss_pred HhhhchhhcCCc------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeeeccCCHHHHHHHH
Confidence 999854321110 011231 112 3 67899999999999999998753 234787777889999999999
Q ss_pred HHhCCCC----CCCCCCc-c-CC-------------CCccccCHHHHHhcCCCccchhHHHHHHH
Q 025065 203 REHYPTL----LRSGKLE-E-KY-------------QPTIKVSQERAKSLGINFTPWEVGVRGCI 248 (258)
Q Consensus 203 ~~~~~~~----~~~~~~~-~-~~-------------~~~~~~d~~k~~~lg~~p~~~~~~l~~~~ 248 (258)
.+.+|.. ++|.... . .. ......+.+..+.+|-+|++|++.+++..
T Consensus 230 ~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 294 (299)
T 2wm3_A 230 TKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHK 294 (299)
T ss_dssp HHHHSSCEEECCCCTHHHHTTCSTTHHHHHHHHHHHTTCCCCCHHHHHHHCTTCCCHHHHHHHHG
T ss_pred HHHHCCCceeEecCHHHHHhcCCCcHHHHHHHHHHHHhcCCCCHHHHHHhCCCCCCHHHHHHhCh
Confidence 9998753 2221110 0 00 01111223222668888899999988763
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.6e-27 Score=193.38 Aligned_cols=193 Identities=16% Similarity=0.168 Sum_probs=137.0
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCC
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
||+...++++||||||||+||++++++|+++|++|++++|++... ...+..+. ..+++++++|++|++++.++++++
T Consensus 4 ~m~~~~m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~~l~--~~~v~~v~~Dl~d~~~l~~a~~~~ 80 (318)
T 2r6j_A 4 GMEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSK-TTLLDEFQ--SLGAIIVKGELDEHEKLVELMKKV 80 (318)
T ss_dssp -----CCCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSC-HHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTC
T ss_pred cccccCCCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCch-hhHHHHhh--cCCCEEEEecCCCHHHHHHHHcCC
Confidence 355433346899999999999999999999999999999987522 11111111 246899999999999999999999
Q ss_pred cEEEecCCCCCC---------------------CC-C------C---c-hhhHHHHHHHHHHHHHHHHHHcCCcEEEEcC
Q 025065 81 DGVFHTASPVIF---------------------LS-D------N---P-QEWYSLAKTLAEEAAWKFAKENGIDLVAIHP 128 (258)
Q Consensus 81 d~Vih~a~~~~~---------------------~~-~------~---~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp 128 (258)
|+|||+++.... +. . . + .+.| .+|..+|++++ +.+++++++||
T Consensus 81 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~----~~~~~~~~lr~ 155 (318)
T 2r6j_A 81 DVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALI-ERKRMIRRAIE----EANIPYTYVSA 155 (318)
T ss_dssp SEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHH-HHHHHHHHHHH----HTTCCBEEEEC
T ss_pred CEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhH-HHHHHHHHHHH----hcCCCeEEEEc
Confidence 999999974210 00 0 0 0 1457 89999988754 56899999999
Q ss_pred CccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEe-CCCcCHHHHHH
Q 025065 129 GTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLA-GSVAQHSDILK 200 (258)
Q Consensus 129 ~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~-~~~~t~~e~~~ 200 (258)
+.++++.. ..++.....+. ..++ ..++|+|++|+|++++.++.++...+ .| +.+ ++.+|+.|+++
T Consensus 156 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~ 228 (318)
T 2r6j_A 156 NCFASYFI-------NYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELIS 228 (318)
T ss_dssp CEEHHHHH-------HHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHH
T ss_pred ceehhhhh-------hhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHH
Confidence 98876421 11111111222 2222 57899999999999999998875434 44 544 57899999999
Q ss_pred HHHHhCCC
Q 025065 201 FLREHYPT 208 (258)
Q Consensus 201 ~i~~~~~~ 208 (258)
.+.+.+|.
T Consensus 229 ~~~~~~g~ 236 (318)
T 2r6j_A 229 RWEKKIGK 236 (318)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhCC
Confidence 99999875
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-26 Score=184.27 Aligned_cols=164 Identities=16% Similarity=0.166 Sum_probs=133.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
|+||+||||||+|+||++|+++|+++|++|++++|+..+.. ..++.++.+|++|++++.++++++|+|||
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 70 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCDGIVH 70 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 34689999999999999999999999999999999875532 25789999999999999999999999999
Q ss_pred cCCCCCCCCCCch--------------------------------------------------hhHHHHHHHHHHHHHHH
Q 025065 86 TASPVIFLSDNPQ--------------------------------------------------EWYSLAKTLAEEAAWKF 115 (258)
Q Consensus 86 ~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~~~ 115 (258)
+||.......... +.|+.+|..+|.+++.+
T Consensus 71 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~ 150 (267)
T 3rft_A 71 LGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMY 150 (267)
T ss_dssp CCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred CCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence 9998432211100 46999999999999999
Q ss_pred HHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-e-EEEeCCCc
Q 025065 116 AKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-R-YLLAGSVA 193 (258)
Q Consensus 116 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~-~~~~~~~~ 193 (258)
+.+++++++++||+.|||+..... ..++|++++|+++++..+++.+...+ + |++++++.
T Consensus 151 a~~~g~~~~~vr~~~v~~~~~~~~-------------------~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~ 211 (267)
T 3rft_A 151 FDKFGQETALVRIGSCTPEPNNYR-------------------MLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDA 211 (267)
T ss_dssp HHHHCCCEEEEEECBCSSSCCSTT-------------------HHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCTT
T ss_pred HHHhCCeEEEEEeecccCCCCCCC-------------------ceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCCC
Confidence 989999999999999998742211 33568999999999999999887654 4 46667666
Q ss_pred CHHHH
Q 025065 194 QHSDI 198 (258)
Q Consensus 194 t~~e~ 198 (258)
++.++
T Consensus 212 ~~~~~ 216 (267)
T 3rft_A 212 GWWDN 216 (267)
T ss_dssp CCBCC
T ss_pred CcccC
Confidence 65544
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=189.94 Aligned_cols=191 Identities=14% Similarity=0.200 Sum_probs=139.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc---hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT---EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+|+|+|||||||||++++++|+++|++|++++|+...... ..+..+. ..+++++.+|++|++++.++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 5789999999999999999999999999999998654211 1111111 2578999999999999999999999999
Q ss_pred ecCCCCCCCC------------------------------C------Cc-hhhHHHHHHHHHHHHHHHHHHcCCcEEEEc
Q 025065 85 HTASPVIFLS------------------------------D------NP-QEWYSLAKTLAEEAAWKFAKENGIDLVAIH 127 (258)
Q Consensus 85 h~a~~~~~~~------------------------------~------~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR 127 (258)
|+++...... . .+ .+.| .+|..+|++++ +.+++++++|
T Consensus 82 ~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~----~~g~~~~ilr 156 (313)
T 1qyd_A 82 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITF-IDKRKVRRAIE----AASIPYTYVS 156 (313)
T ss_dssp ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHH----HTTCCBCEEE
T ss_pred ECCccccchhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchH-HHHHHHHHHHH----hcCCCeEEEE
Confidence 9998642100 0 01 1357 99999998853 5689999999
Q ss_pred CCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEe-CCCcCHHHHH
Q 025065 128 PGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLA-GSVAQHSDIL 199 (258)
Q Consensus 128 p~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~-~~~~t~~e~~ 199 (258)
|+.++|+.......... .....+. ..++ ..++|+|++|+|++++.++.++...+ .| +.+ ++.+|+.|++
T Consensus 157 p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~ 233 (313)
T 1qyd_A 157 SNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVI 233 (313)
T ss_dssp CCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHH
T ss_pred eceeccccccccccccc---cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHH
Confidence 99998864322111000 0001222 2332 67899999999999999999875434 55 555 4789999999
Q ss_pred HHHHHhCCC
Q 025065 200 KFLREHYPT 208 (258)
Q Consensus 200 ~~i~~~~~~ 208 (258)
+.+.+.+|.
T Consensus 234 ~~~~~~~g~ 242 (313)
T 1qyd_A 234 QIWERLSEQ 242 (313)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHhcCC
Confidence 999999874
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.5e-25 Score=172.07 Aligned_cols=166 Identities=20% Similarity=0.189 Sum_probs=123.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|||||||||||||++|+++|+++|++|++++|++.+.. .+. ..+++++.+|++|++. +.+.++|+|||+|+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~-----~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA--DRL-----GATVATLVKEPLVLTE--ADLDSVDAVVDALS 71 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHT-----CTTSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccc--ccc-----CCCceEEecccccccH--hhcccCCEEEECCc
Confidence 47999999999999999999999999999999764321 111 2478999999999988 78899999999998
Q ss_pred CCCCCCCCc------------------------------------------------hhhHHHHHHHHHHHHHHHHHHcC
Q 025065 89 PVIFLSDNP------------------------------------------------QEWYSLAKTLAEEAAWKFAKENG 120 (258)
Q Consensus 89 ~~~~~~~~~------------------------------------------------~~~Y~~sK~~~e~~~~~~~~~~~ 120 (258)
......... .+.|+.+|..+|.+ ..+.++.+
T Consensus 72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~~~ 150 (224)
T 3h2s_A 72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY-QFLQMNAN 150 (224)
T ss_dssp CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH-HHHTTCTT
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH-HHHHhcCC
Confidence 741100000 14699999999944 45555679
Q ss_pred CcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC-CCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEeCCCcC
Q 025065 121 IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLAGSVAQ 194 (258)
Q Consensus 121 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~~~~~t 194 (258)
++++++||+.+||++.... . ..+. ...+ ..++++|++|+|++++.+++++...| +| +.+.+...
T Consensus 151 i~~~ivrp~~v~g~~~~~~--~--------~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~ 219 (224)
T 3h2s_A 151 VNWIGISPSEAFPSGPATS--Y--------VAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEH 219 (224)
T ss_dssp SCEEEEEECSBCCCCCCCC--E--------EEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC---
T ss_pred CcEEEEcCccccCCCcccC--c--------eecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchh
Confidence 9999999999999854322 1 1111 2223 66899999999999999999987766 78 44444433
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=177.34 Aligned_cols=182 Identities=20% Similarity=0.206 Sum_probs=136.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
+++|+||||||+|+||++++++|+++ |++|++++|++.+. ..+ ..++.++.+|+++++++.++++++|+|
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~-----~~~---~~~~~~~~~D~~d~~~~~~~~~~~d~v 73 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-----EKI---GGEADVFIGDITDADSINPAFQGIDAL 73 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH-----HHT---TCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch-----hhc---CCCeeEEEecCCCHHHHHHHHcCCCEE
Confidence 35789999999999999999999999 89999999975321 111 245778999999999999999999999
Q ss_pred EecCCCCCCC-----------CCC-------c-h------------------------------------h-----hHHH
Q 025065 84 FHTASPVIFL-----------SDN-------P-Q------------------------------------E-----WYSL 103 (258)
Q Consensus 84 ih~a~~~~~~-----------~~~-------~-~------------------------------------~-----~Y~~ 103 (258)
||+|+..... ... . . + .|+.
T Consensus 74 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~ 153 (253)
T 1xq6_A 74 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILV 153 (253)
T ss_dssp EECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHH
T ss_pred EEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHH
Confidence 9999975310 000 0 0 2 3566
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 104 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 104 sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+|..+|.+++ +.+++++++||+.+||+..... .. ..+. ..++...+++|++|+|++++.+++++.
T Consensus 154 sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~ 220 (253)
T 1xq6_A 154 WKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVR-EL--------LVGKDDELLQTDTKTVPRADVAEVCIQALLFEE 220 (253)
T ss_dssp HHHHHHHHHH----TSSSCEEEEEECEEECSCSSSS-CE--------EEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHH----hCCCceEEEecceeecCCcchh-hh--------hccCCcCCcCCCCcEEcHHHHHHHHHHHHcCcc
Confidence 9999998854 4799999999999999864321 10 1111 111134679999999999999999876
Q ss_pred CCc-eEE-EeC---CCcCHHHHHHHHHHhCCC
Q 025065 182 ASG-RYL-LAG---SVAQHSDILKFLREHYPT 208 (258)
Q Consensus 182 ~~~-~~~-~~~---~~~t~~e~~~~i~~~~~~ 208 (258)
..| +|+ .++ +.+|+.|+++.+.+.+|.
T Consensus 221 ~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 221 AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 545 774 444 359999999999998764
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-25 Score=173.59 Aligned_cols=169 Identities=17% Similarity=0.218 Sum_probs=115.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|||||||||||||++|+++|+++|++|++++|++.+.. .+. .+++++.+|++|++. +.+.++|+|||+|+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----~~~---~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKIT-----QTH---KDINILQKDIFDLTL--SDLSDQNVVVDAYG 70 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHH-----HHC---SSSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhh-----hcc---CCCeEEeccccChhh--hhhcCCCEEEECCc
Confidence 47999999999999999999999999999999864321 111 468999999999987 78899999999999
Q ss_pred CCCCCCCCch---------------------------------------------hhHHHHHHHHHHHHHHHHH-HcCCc
Q 025065 89 PVIFLSDNPQ---------------------------------------------EWYSLAKTLAEEAAWKFAK-ENGID 122 (258)
Q Consensus 89 ~~~~~~~~~~---------------------------------------------~~Y~~sK~~~e~~~~~~~~-~~~~~ 122 (258)
.......... +.|+.+|..+|.+ ..+.. +.+++
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~-~~~~~~~~gi~ 149 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQL-EHLKSHQAEFS 149 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHH-HHHHTTTTTSC
T ss_pred CCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHH-HHHHhhccCcc
Confidence 8432211111 2388999999986 33333 67999
Q ss_pred EEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcCCCCCc-eEEEe-CCCcCHH
Q 025065 123 LVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKASG-RYLLA-GSVAQHS 196 (258)
Q Consensus 123 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~t~~ 196 (258)
++++||+.+||+...... + . ..+. ..+. ...++++++|+|++++.+++++...| .|+++ +...+.+
T Consensus 150 ~~ivrp~~v~g~~~~~~~------~-~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~ 219 (221)
T 3ew7_A 150 WTYISPSAMFEPGERTGD------Y-Q-IGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHH 219 (221)
T ss_dssp EEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC-------
T ss_pred EEEEeCcceecCCCccCc------e-E-eccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCccccc
Confidence 999999999998432110 0 0 1111 1111 34579999999999999999988766 77554 4444443
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=184.81 Aligned_cols=187 Identities=10% Similarity=0.136 Sum_probs=137.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC-CCc---cchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSP---KTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
||+|+||||||+||++++++|+++|++|++++|++ ... ....+..+. ..+++++.+|++|++++.++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~~~d~v 81 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLKQVDIV 81 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence 57899999999999999999999999999999986 321 111111111 246899999999999999999999999
Q ss_pred EecCCCCC----------------C-----CCC-------C---c-hhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcc
Q 025065 84 FHTASPVI----------------F-----LSD-------N---P-QEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTV 131 (258)
Q Consensus 84 ih~a~~~~----------------~-----~~~-------~---~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v 131 (258)
||+++... . +.. . + .+.| .+|..+|++++ +.+++++++||+.+
T Consensus 82 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~ 156 (321)
T 3c1o_A 82 ISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVL-EKKRIIRRAIE----AAALPYTYVSANCF 156 (321)
T ss_dssp EECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHH----HHTCCBEEEECCEE
T ss_pred EECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHH-HHHHHHHHHHH----HcCCCeEEEEecee
Confidence 99987421 0 000 0 1 1468 99999998864 45899999999998
Q ss_pred ccCCcCCCCCccHHHHH---HHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEe-CCCcCHHHHHH
Q 025065 132 IGPFFQPILNFGAEVIL---NLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLA-GSVAQHSDILK 200 (258)
Q Consensus 132 ~G~~~~~~~~~~~~~~~---~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~-~~~~t~~e~~~ 200 (258)
+|+... .+.. ....+. ..++ ..++|+|++|+|++++.++.++...| .| +.+ ++.+|+.|+++
T Consensus 157 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~ 229 (321)
T 3c1o_A 157 GAYFVN-------YLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELIS 229 (321)
T ss_dssp HHHHHH-------HHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHH
T ss_pred cccccc-------ccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHH
Confidence 875321 0110 001122 2222 67899999999999999998876445 55 544 57999999999
Q ss_pred HHHHhCCC
Q 025065 201 FLREHYPT 208 (258)
Q Consensus 201 ~i~~~~~~ 208 (258)
.+.+.+|.
T Consensus 230 ~~~~~~g~ 237 (321)
T 3c1o_A 230 LWEAKSGL 237 (321)
T ss_dssp HHHHHHTS
T ss_pred HHHHHcCC
Confidence 99999874
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-25 Score=175.79 Aligned_cols=164 Identities=21% Similarity=0.145 Sum_probs=123.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+|+|+||||+|+||++++++|+++|+ +|++++|++... ..+++++.+|+++++++.+++ +|+|||
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~-----------~~~~~~~~~D~~~~~~~~~~~--~d~vi~ 71 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----------HPRLDNPVGPLAELLPQLDGS--IDTAFC 71 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----------CTTEECCBSCHHHHGGGCCSC--CSEEEE
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc-----------CCCceEEeccccCHHHHHHhh--hcEEEE
Confidence 57999999999999999999999998 999999986541 246888999999998888877 999999
Q ss_pred cCCCCCCCCCCch--------------------------------------hhHHHHHHHHHHHHHHHHHHcCCc-EEEE
Q 025065 86 TASPVIFLSDNPQ--------------------------------------EWYSLAKTLAEEAAWKFAKENGID-LVAI 126 (258)
Q Consensus 86 ~a~~~~~~~~~~~--------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~-~~il 126 (258)
+|+.......... +.|+.+|.++|++++. .+++ ++++
T Consensus 72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~y~~sK~~~e~~~~~----~~~~~~~~v 147 (215)
T 2a35_A 72 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQE----QGWPQLTIA 147 (215)
T ss_dssp CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTT----SCCSEEEEE
T ss_pred CeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCccHHHHHHHHHHHHHHH----cCCCeEEEE
Confidence 9997532111111 6799999999998654 5899 9999
Q ss_pred cCCccccCCcCCCCCccHHHHHHHHcCCCCCC-CCcceeeHHHHHHHHHHhhcCCCCCceEEEe-CCCcCH
Q 025065 127 HPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQH 195 (258)
Q Consensus 127 Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~t~ 195 (258)
||+.+||+...... +..+......++ ..++++|++|+|++++.+++++. .+.|+++ ++.+++
T Consensus 148 rp~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~~~~~~~ 211 (215)
T 2a35_A 148 RPSLLFGPREEFRL------AEILAAPIARILPGKYHGIEACDLARALWRLALEEG-KGVRFVESDELRKL 211 (215)
T ss_dssp ECCSEESTTSCEEG------GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEHHHHHHH
T ss_pred eCceeeCCCCcchH------HHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC-CCceEEcHHHHHHh
Confidence 99999999754211 111111111112 45789999999999999999875 6678554 554443
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-24 Score=180.89 Aligned_cols=191 Identities=17% Similarity=0.175 Sum_probs=141.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEcc-CCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN-LLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~~~~~~~~~d~Vih 85 (258)
++|+|||||||||||++|+++|+++|++|++++|+++......+.. ..+++++.+| ++|++++.++++++|+|||
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~----~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA----IPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT----STTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh----cCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 3578999999999999999999999999999999876532111211 1368899999 9999999999999999999
Q ss_pred cCCCCCC-------------------------CCC-------CchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 86 TASPVIF-------------------------LSD-------NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 86 ~a~~~~~-------------------------~~~-------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
+++.... +.. .+.+.|+.+|..+|++++. .+++++++||+ +||
T Consensus 80 ~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g 154 (352)
T 1xgk_A 80 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYN 154 (352)
T ss_dssp CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEG
T ss_pred cCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHH----cCCCEEEEecc-eec
Confidence 9865310 000 0015689999999999654 48999999986 688
Q ss_pred CCcCCCCCccHHHHH-H-HHcCCC----CC-C-CCcceeeH-HHHHHHHHHhhcCCC---CCceEEEeCCCcCHHHHHHH
Q 025065 134 PFFQPILNFGAEVIL-N-LINGDQ----SF-A-FPYIFVEI-RDVVYAHIRALEVPK---ASGRYLLAGSVAQHSDILKF 201 (258)
Q Consensus 134 ~~~~~~~~~~~~~~~-~-~~~g~~----~~-~-~~~~~i~v-~D~a~~~~~~~~~~~---~~~~~~~~~~~~t~~e~~~~ 201 (258)
++........ +. . ...|.. .. + ..++++|+ +|+|++++.+++++. .+++|+++++.+|+.|+++.
T Consensus 155 ~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~ 231 (352)
T 1xgk_A 155 NNFTSLPYPL---FQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAA 231 (352)
T ss_dssp GGCBSSSCSS---CBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHH
T ss_pred CCchhccccc---ccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHH
Confidence 8654321110 10 0 112331 11 2 78899999 899999999998752 34588777888999999999
Q ss_pred HHHhCCCC
Q 025065 202 LREHYPTL 209 (258)
Q Consensus 202 i~~~~~~~ 209 (258)
+.+.+|..
T Consensus 232 i~~~~G~~ 239 (352)
T 1xgk_A 232 FSRALNRR 239 (352)
T ss_dssp HHHHHTSC
T ss_pred HHHHHCCC
Confidence 99998753
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.1e-25 Score=180.62 Aligned_cols=191 Identities=17% Similarity=0.273 Sum_probs=138.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc--cc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP--KT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
+|+|+|||||||||++++++|+++|++|++++|+.... .. ..+..+. ..+++++++|++|++++.++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 57899999999999999999999999999999986532 11 1111111 257899999999999999999999999
Q ss_pred EecCCCCCC-------------C------------C-C-----Cc-hhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcc
Q 025065 84 FHTASPVIF-------------L------------S-D-----NP-QEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTV 131 (258)
Q Consensus 84 ih~a~~~~~-------------~------------~-~-----~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v 131 (258)
||+++.... . . . .+ .+.| .+|..+|++++ +.+++++++||+.+
T Consensus 82 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~----~~~~~~~~~r~~~~ 156 (308)
T 1qyc_A 82 ISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIE----AEGIPYTYVSSNCF 156 (308)
T ss_dssp EECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHH----HHTCCBEEEECCEE
T ss_pred EECCcchhhhhHHHHHHHHHhcCCCceEeecccccCccccccCCcchhHH-HHHHHHHHHHH----hcCCCeEEEEecee
Confidence 999875210 0 0 0 01 1468 99999998864 45899999999999
Q ss_pred ccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEe-CCCcCHHHHHHHHH
Q 025065 132 IGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLA-GSVAQHSDILKFLR 203 (258)
Q Consensus 132 ~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~-~~~~t~~e~~~~i~ 203 (258)
+|+......... .....+. ..++ ..++|+|++|+|++++.+++++...+ .| +.+ ++.+|+.|+++.+.
T Consensus 157 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~ 232 (308)
T 1qyc_A 157 AGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWE 232 (308)
T ss_dssp HHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHH
T ss_pred cccccccccccc----ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHH
Confidence 886432211100 0001111 2222 67899999999999999998875444 55 444 47899999999999
Q ss_pred HhCCCC
Q 025065 204 EHYPTL 209 (258)
Q Consensus 204 ~~~~~~ 209 (258)
+.+|..
T Consensus 233 ~~~g~~ 238 (308)
T 1qyc_A 233 KKIDKT 238 (308)
T ss_dssp HHTTSC
T ss_pred HHhCCC
Confidence 999753
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.4e-23 Score=158.40 Aligned_cols=161 Identities=19% Similarity=0.227 Sum_probs=119.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+|+|+||||+|+||++++++|+++|++|++++|++..... . ...+++++.+|+++++++.++++++|+|||+|
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 75 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-----E--GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL 75 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-----S--SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-----c--cCCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence 4789999999999999999999999999999997644311 0 02468999999999999999999999999999
Q ss_pred CCCCCC-CCCch--------------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcC
Q 025065 88 SPVIFL-SDNPQ--------------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHP 128 (258)
Q Consensus 88 ~~~~~~-~~~~~--------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp 128 (258)
+..... ..... +.|+.+|..+|+++ ++.+++++++||
T Consensus 76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~----~~~~i~~~~lrp 151 (206)
T 1hdo_A 76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVL----RESGLKYVAVMP 151 (206)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHH----HHTCSEEEEECC
T ss_pred cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHH----HhCCCCEEEEeC
Confidence 975431 11111 25999999999986 456999999999
Q ss_pred CccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEeC
Q 025065 129 GTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLAG 190 (258)
Q Consensus 129 ~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 190 (258)
+.+ ++..... ... ....+. ...+++|++|+|++++.+++++...| .|++++
T Consensus 152 ~~~-~~~~~~~-~~~-----~~~~~~----~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~ 203 (206)
T 1hdo_A 152 PHI-GDQPLTG-AYT-----VTLDGR----GPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH 203 (206)
T ss_dssp SEE-ECCCCCS-CCE-----EESSSC----SSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred Ccc-cCCCCCc-ceE-----ecccCC----CCCCccCHHHHHHHHHHHhcCccccccceeeec
Confidence 997 3332111 000 000111 11589999999999999999876555 775554
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=166.27 Aligned_cols=171 Identities=19% Similarity=0.125 Sum_probs=126.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|++|+||||||+|+||++++++|+++|+ +|++++|++....... ..++.++.+|+++++++.++++++|+|
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~d~v 88 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDVG 88 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhcCCCEE
Confidence 3568999999999999999999999999 9999999875432211 135788999999999999999999999
Q ss_pred EecCCCCCCCCCC-------ch------------------------------hhHHHHHHHHHHHHHHHHHHcCC-cEEE
Q 025065 84 FHTASPVIFLSDN-------PQ------------------------------EWYSLAKTLAEEAAWKFAKENGI-DLVA 125 (258)
Q Consensus 84 ih~a~~~~~~~~~-------~~------------------------------~~Y~~sK~~~e~~~~~~~~~~~~-~~~i 125 (258)
||+|+........ .. +.|+.+|..+|.+++ ..++ ++++
T Consensus 89 i~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~Y~~sK~~~e~~~~----~~~~~~~~~ 164 (242)
T 2bka_A 89 FCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVE----ELKFDRYSV 164 (242)
T ss_dssp EECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHH----TTCCSEEEE
T ss_pred EECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCcchHHHHHHHHHHHHH----hcCCCCeEE
Confidence 9999974211000 00 679999999999864 4478 5999
Q ss_pred EcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 025065 126 IHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLA 189 (258)
Q Consensus 126 lRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 189 (258)
+||+.+||+..... .............+.......+++++|+|++++.++.++...+.|+.+
T Consensus 165 vrpg~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~ 226 (242)
T 2bka_A 165 FRPGVLLCDRQESR--PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLE 226 (242)
T ss_dssp EECCEEECTTGGGS--HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEE
T ss_pred EcCceecCCCCCCc--HHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccccCeeEee
Confidence 99999999965421 111122222222221112346999999999999999988777777654
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-24 Score=178.38 Aligned_cols=190 Identities=15% Similarity=0.206 Sum_probs=137.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC-c----cchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS-P----KTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
||+|+||||||+||++++++|+++|++|++++|++.. . ....+..+. ..+++++++|++|++++.++++++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIKQVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence 5689999999999999999999999999999998621 1 111111111 24689999999999999999999999
Q ss_pred EEecCCCCC----------------C-----CC-C---------Cc-hhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 83 VFHTASPVI----------------F-----LS-D---------NP-QEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 83 Vih~a~~~~----------------~-----~~-~---------~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
|||+++... . +. . .+ .+.| .+|..+|++++ +.+++++++||+.
T Consensus 80 vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~----~~~i~~~~lrp~~ 154 (307)
T 2gas_A 80 VICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVF-EEKASIRRVIE----AEGVPYTYLCCHA 154 (307)
T ss_dssp EEECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHH----HHTCCBEEEECCE
T ss_pred EEECCcccccccHHHHHHHHHhcCCceEEeecccccCcccccCCCcchhHH-HHHHHHHHHHH----HcCCCeEEEEcce
Confidence 999997521 0 00 0 11 1568 99999998764 4589999999999
Q ss_pred cccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc-eE-EEe-CCCcCHHHHHHHH
Q 025065 131 VIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG-RY-LLA-GSVAQHSDILKFL 202 (258)
Q Consensus 131 v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~-~~~-~~~~t~~e~~~~i 202 (258)
++++......... .....+. ..++ ..++|+|++|+|++++.++.++...+ .| +.+ ++.+|+.|+++.+
T Consensus 155 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~ 230 (307)
T 2gas_A 155 FTGYFLRNLAQLD----ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALW 230 (307)
T ss_dssp ETTTTGGGTTCTT----CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHH
T ss_pred eeccccccccccc----cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHH
Confidence 9886532211100 0001111 2222 56899999999999999998875444 44 544 4789999999999
Q ss_pred HHhCCC
Q 025065 203 REHYPT 208 (258)
Q Consensus 203 ~~~~~~ 208 (258)
.+.+|.
T Consensus 231 ~~~~g~ 236 (307)
T 2gas_A 231 EKKIGK 236 (307)
T ss_dssp HHHHTS
T ss_pred HHHhCC
Confidence 999875
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-24 Score=172.00 Aligned_cols=192 Identities=21% Similarity=0.168 Sum_probs=138.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|++|||||+|+||++++++|+++|++|++++|+...... .... ...++.++++|+++++++.++++ +
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD-LVAA---YPDRAEAISLDVTDGERIDVVAADVLARYGR 79 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH-HHHH---CTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHh---ccCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999997644321 1111 13578999999999998888775 7
Q ss_pred CcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||...... .... +.|+.+|...|
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 159 (281)
T 3m1a_A 80 VDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALE 159 (281)
T ss_dssp CSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHH
Confidence 899999999853211 1111 68999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCC-------CccHHH---HHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL-------NFGAEV---ILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-------~~~~~~---~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.+++.++.+ +|++++++|||.++++...... ...... ......+. ...++.+++|+|++++.+
T Consensus 160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~a~~~~ 235 (281)
T 3m1a_A 160 QLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGS----DGSQPGDPAKAAAAIRLA 235 (281)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC---------CBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhc----cCCCCCCHHHHHHHHHHH
Confidence 999999887 7999999999999887533211 111111 11111111 455688999999999999
Q ss_pred hcCCCCCceEEE-eCCCcCHHHHHHHHHHhC
Q 025065 177 LEVPKASGRYLL-AGSVAQHSDILKFLREHY 206 (258)
Q Consensus 177 ~~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~ 206 (258)
++++...+.|++ ++....+.+....+.+.+
T Consensus 236 ~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~ 266 (281)
T 3m1a_A 236 LDTEKTPLRLALGGDAVDFLTGHLDSVRAEL 266 (281)
T ss_dssp HHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence 999876667754 455566677776666544
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-23 Score=166.82 Aligned_cols=197 Identities=15% Similarity=0.200 Sum_probs=142.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+||||||+|+||++++++|+++|++|++++|+...... ...++.. ..++.++.+|+++++++.++++
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 91 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQK-VCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKHG 91 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHH-HHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999886533211 1111111 1268999999999999888775
Q ss_pred CCcEEEecCCCCCCC-----CCCch------------------------------------------------hhHHHHH
Q 025065 79 GCDGVFHTASPVIFL-----SDNPQ------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~-----~~~~~------------------------------------------------~~Y~~sK 105 (258)
++|+|||+||..... ..... ..|+.+|
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK 171 (278)
T 2bgk_A 92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATK 171 (278)
T ss_dssp CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHH
T ss_pred CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHH
Confidence 799999999975321 11111 3699999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
...|.+++.++.+ +|++++++|||.++|+...............+....+. ....+++++|+|++++.++..+
T Consensus 172 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~~~~ 249 (278)
T 2bgk_A 172 HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN--LKGTLLRAEDVADAVAYLAGDESK 249 (278)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS--SCSCCCCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccc--cccccCCHHHHHHHHHHHcCcccc
Confidence 9999999998876 58999999999999986543322122222222221110 2456899999999999999754
Q ss_pred CCCc-eEEEe-CCCcCHHHHHHHHHHhC
Q 025065 181 KASG-RYLLA-GSVAQHSDILKFLREHY 206 (258)
Q Consensus 181 ~~~~-~~~~~-~~~~t~~e~~~~i~~~~ 206 (258)
...| .++++ +...++.|+++.+.+.+
T Consensus 250 ~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 250 YVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp TCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred cCCCCEEEECCcccccCCccchhhhhhc
Confidence 2346 56555 67889999999887643
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=162.29 Aligned_cols=178 Identities=21% Similarity=0.139 Sum_probs=129.6
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---C
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---G 79 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~ 79 (258)
...+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...+ ..+++++.+|+++++++.++++ +
T Consensus 2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (244)
T 1cyd_A 2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS-LAKE----CPGIEPVCVDLGDWDATEKALGGIGP 76 (244)
T ss_dssp -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHH----STTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHh----ccCCCcEEecCCCHHHHHHHHHHcCC
Confidence 344678999999999999999999999999999999987533211 1111 1356788999999999999886 4
Q ss_pred CcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~~ 108 (258)
+|+|||+||...... .... ..|+.+|...
T Consensus 77 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 156 (244)
T 1cyd_A 77 VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAM 156 (244)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHH
Confidence 799999999753211 0100 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
|.+++.++.+ .+++++++||+.++|+...... ....++..+..+. ..+++++++|+|++++.++..+. ..
T Consensus 157 ~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~ 231 (244)
T 1cyd_A 157 TMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERH----PLRKFAEVEDVVNSILFLLSDRSASTS 231 (244)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCcccCccccccc-cCHHHHHHHHhcC----CccCCCCHHHHHHHHHHHhCchhhccc
Confidence 9999998877 5899999999999997533111 1122333333333 45679999999999999997643 34
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| .+.+++
T Consensus 232 G~~~~v~g 239 (244)
T 1cyd_A 232 GGGILVDA 239 (244)
T ss_dssp SSEEEEST
T ss_pred CCEEEECC
Confidence 5 455544
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=162.26 Aligned_cols=179 Identities=20% Similarity=0.192 Sum_probs=131.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcC-CCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD-PNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+ +.... ....++.....++.++.+|+++++++.++++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID-ETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHH-HHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 567899999999999999999999999999999998 43321 1111121113468999999999999888876
Q ss_pred -CCcEEEecCCC-CCCCC---CC------------------------------------ch-----------------hh
Q 025065 79 -GCDGVFHTASP-VIFLS---DN------------------------------------PQ-----------------EW 100 (258)
Q Consensus 79 -~~d~Vih~a~~-~~~~~---~~------------------------------------~~-----------------~~ 100 (258)
++|+|||+||. ..... .. .. ..
T Consensus 84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~ 163 (258)
T 3afn_B 84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGL 163 (258)
T ss_dssp SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHH
T ss_pred CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchH
Confidence 79999999997 22110 00 00 46
Q ss_pred HHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 101 YSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
|+.+|...|.+++.++.+. |++++++||+.++++..... .......+..+. ....+++++|+|++++.++
T Consensus 164 Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~ 236 (258)
T 3afn_B 164 YGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGI----PMGRFGTAEEMAPAFLFFA 236 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTC----TTCSCBCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccC----CCCcCCCHHHHHHHHHHHh
Confidence 9999999999999887764 89999999999999864432 222333444333 3456899999999999999
Q ss_pred cCC---CCCc-eEEEeCCC
Q 025065 178 EVP---KASG-RYLLAGSV 192 (258)
Q Consensus 178 ~~~---~~~~-~~~~~~~~ 192 (258)
..+ ...| .|++++..
T Consensus 237 ~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 237 SHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp CHHHHTTCCSEEEEESTTS
T ss_pred CcchhccccCCEEeECCCc
Confidence 764 2346 66766554
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=162.95 Aligned_cols=183 Identities=14% Similarity=0.148 Sum_probs=133.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+||||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|+++++++.++++
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANH-VVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 567899999999999999999999999999999997543211 111221123468899999999999888775
Q ss_pred CCcEEEecCCCCCCCCC--Cch-----------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD--NPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~--~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+||....... ... +.|+.+|...|
T Consensus 88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 167 (255)
T 1fmc_A 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS 167 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence 79999999998543211 111 57999999999
Q ss_pred HHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc
Q 025065 110 EAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG 184 (258)
Q Consensus 110 ~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 184 (258)
.+++.++.+. +++++++|||.++++...... ..........+. ....+.+++|+|++++.++..+. ..|
T Consensus 168 ~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G 241 (255)
T 1fmc_A 168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHT----PIRRLGQPQDIANAALFLCSPAASWVSG 241 (255)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHHHHHHTC----SSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc--ChHHHHHHHhcC----CcccCCCHHHHHHHHHHHhCCccccCCC
Confidence 9999888764 899999999999988543221 222334444433 33458899999999999997642 245
Q ss_pred -eEEEe-CCCcCH
Q 025065 185 -RYLLA-GSVAQH 195 (258)
Q Consensus 185 -~~~~~-~~~~t~ 195 (258)
.|+++ |...|+
T Consensus 242 ~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 242 QILTVSGGGVQEL 254 (255)
T ss_dssp CEEEESTTSCCCC
T ss_pred cEEEECCceeccC
Confidence 67555 555553
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-23 Score=169.81 Aligned_cols=197 Identities=15% Similarity=0.089 Sum_probs=136.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc-CCcEEEEEccCCCcccHHHHhC-----
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+...... ....+... ..++.++.+|+++.+++.++++
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKA-TAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999987543211 11111111 3468999999999998887765
Q ss_pred --CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK 105 (258)
++|+|||+||...... .... ..|+.+|
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 181 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK 181 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHH
Confidence 4699999999743211 1111 5799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK- 181 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~- 181 (258)
.+.|.+++.++.+ +|++++++|||.++++...............+..+. ....+.+++|+|++++.++..+.
T Consensus 182 ~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~dva~~~~~l~~~~~~ 257 (302)
T 1w6u_A 182 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI----PCGRLGTVEELANLAAFLCSDYAS 257 (302)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC----TTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcC----CcCCCCCHHHHHHHHHHHcCCccc
Confidence 9999999998877 689999999999998742211111111112223322 23458899999999999987543
Q ss_pred -CCc-eEEEe-CCCcCHHHHHHHHHHhC
Q 025065 182 -ASG-RYLLA-GSVAQHSDILKFLREHY 206 (258)
Q Consensus 182 -~~~-~~~~~-~~~~t~~e~~~~i~~~~ 206 (258)
..| .++++ |...++.++++.+.+..
T Consensus 258 ~~~G~~~~v~gg~~~~~~~~~~~~~~~~ 285 (302)
T 1w6u_A 258 WINGAVIKFDGGEEVLISGEFNDLRKVT 285 (302)
T ss_dssp TCCSCEEEESTTHHHHHHSTTGGGGGCC
T ss_pred ccCCCEEEECCCeeeccCCccccchhhc
Confidence 245 56555 55677777777666654
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=160.23 Aligned_cols=180 Identities=16% Similarity=0.077 Sum_probs=130.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+||||||+|+||++++++|+++|++|++++|+...... ....+.....++.++++|++|++++.++++
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATK-AVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999987543211 111111113468999999999998888775
Q ss_pred CCcEEEecCCCCC-CC---CCCch-------------------------------------------------hhHHHHH
Q 025065 79 GCDGVFHTASPVI-FL---SDNPQ-------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 ~~d~Vih~a~~~~-~~---~~~~~-------------------------------------------------~~Y~~sK 105 (258)
++|+|||+||... .. ..... +.|+.+|
T Consensus 90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK 169 (260)
T 3awd_A 90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASK 169 (260)
T ss_dssp CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHH
Confidence 6899999999754 21 11111 3699999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
...|.+++.++.+ +|++++++|||.++++....... .......+..+. ....+++++|+|++++.++..+
T Consensus 170 ~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~ 244 (260)
T 3awd_A 170 AGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME-KPELYDAWIAGT----PMGRVGQPDEVASVVQFLASDAAS 244 (260)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT-CHHHHHHHHHTC----TTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC-ChHHHHHHHhcC----CcCCCCCHHHHHHHHHHHhCchhc
Confidence 9999999998877 69999999999999986431101 122333333332 2345889999999999998753
Q ss_pred CCCc-eEEEeCC
Q 025065 181 KASG-RYLLAGS 191 (258)
Q Consensus 181 ~~~~-~~~~~~~ 191 (258)
...| .+++++.
T Consensus 245 ~~~G~~~~v~gg 256 (260)
T 3awd_A 245 LMTGAIVNVDAG 256 (260)
T ss_dssp TCCSCEEEESTT
T ss_pred cCCCcEEEECCc
Confidence 2355 5666654
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=157.42 Aligned_cols=165 Identities=24% Similarity=0.246 Sum_probs=128.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|++|||||+|+||++++++|+++|++|++++|+...... .++.++.+|+++++++.++++ +
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 96 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----------PDIHTVAGDISKPETADRIVREGIERFGR 96 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----------TTEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------CceEEEEccCCCHHHHHHHHHHHHHHCCC
Confidence 57899999999999999999999999999999998654321 368899999999999888775 7
Q ss_pred CcEEEecCCCCCCCC---CCch-------------------------------------------------hhHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ-------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~-------------------------------------------------~~Y~~sK~~ 107 (258)
+|+|||+||...... .... ..|+.+|..
T Consensus 97 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa 176 (260)
T 3un1_A 97 IDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGG 176 (260)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHH
Confidence 999999999864321 1111 579999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
.+.+++.++.+. |+++.+++||.|+++..... . ........ ....+.+++|+|++++.+.+.....|
T Consensus 177 ~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~---~~~~~~~~----p~~r~~~~~dva~av~~L~~~~~itG 246 (260)
T 3un1_A 177 LNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE---T---HSTLAGLH----PVGRMGEIRDVVDAVLYLEHAGFITG 246 (260)
T ss_dssp HHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG---G---HHHHHTTS----TTSSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH---H---HHHHhccC----CCCCCcCHHHHHHHHHHhcccCCCCC
Confidence 999999998886 89999999999999864321 1 11222222 34468899999999999966666667
Q ss_pred -eEEEeCC
Q 025065 185 -RYLLAGS 191 (258)
Q Consensus 185 -~~~~~~~ 191 (258)
.+++++.
T Consensus 247 ~~i~vdGG 254 (260)
T 3un1_A 247 EILHVDGG 254 (260)
T ss_dssp CEEEESTT
T ss_pred cEEEECCC
Confidence 5666543
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.5e-22 Score=157.28 Aligned_cols=178 Identities=20% Similarity=0.134 Sum_probs=128.3
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CC
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GC 80 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~ 80 (258)
+.+++++||||||+|+||++++++|+++|++|++++|+.++... ...+. .+.+++.+|+++++++.++++ ++
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDS-LVREC----PGIEPVCVDLGDWEATERALGSVGPV 77 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHS----TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHc----CCCCEEEEeCCCHHHHHHHHHHcCCC
Confidence 34578999999999999999999999999999999987532211 11111 246778999999999999886 48
Q ss_pred cEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 81 d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~~e 109 (258)
|+|||+||...... .... +.|+.+|...|
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 157 (244)
T 3d3w_A 78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALD 157 (244)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHH
Confidence 99999999753211 1110 57999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 184 (258)
.+++.++.+ .+++++++||+.++++........ ......+..+. ....+++++|+|++++.++..+ ...|
T Consensus 158 ~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~G 232 (244)
T 3d3w_A 158 MLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-PHKAKTMLNRI----PLGKFAEVEHVVNAILFLLSDRSGMTTG 232 (244)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS-TTHHHHHHHTC----TTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHhcccCeEEEEEEeccccccchhhhccC-hHHHHHHHhhC----CCCCCcCHHHHHHHHHHHcCccccCCCC
Confidence 999998876 589999999999998753311100 01122222222 3456899999999999999754 2345
Q ss_pred -eEEEeCC
Q 025065 185 -RYLLAGS 191 (258)
Q Consensus 185 -~~~~~~~ 191 (258)
.|++++.
T Consensus 233 ~~~~v~gG 240 (244)
T 3d3w_A 233 STLPVEGG 240 (244)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 5666543
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=163.23 Aligned_cols=204 Identities=18% Similarity=0.153 Sum_probs=142.2
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC-
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
|...+++|++|||||+|+||++++++|+++|++|++++|+.+.... ..+........++.++++|+++++++.++++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 4445678999999999999999999999999999999987643321 1121111112278999999999998887765
Q ss_pred ------CCcEEEecCCCCCC-C---CCCch-----------------------------------------------hhH
Q 025065 79 ------GCDGVFHTASPVIF-L---SDNPQ-----------------------------------------------EWY 101 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~-~---~~~~~-----------------------------------------------~~Y 101 (258)
++|+|||+||.... . ..... ..|
T Consensus 85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 164 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAY 164 (281)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHH
T ss_pred HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhH
Confidence 68999999997322 1 11111 679
Q ss_pred HHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 102 SLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+.+|...+.+++.++.+. |+++.+++||.|+++...... ............. ....+.+++|+|++++.++.
T Consensus 165 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~----p~~r~~~~~dva~~~~~l~s 239 (281)
T 3svt_A 165 GVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAIT-ESAELSSDYAMCT----PLPRQGEVEDVANMAMFLLS 239 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHHHC----SSSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcc-cCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhC
Confidence 999999999999988764 699999999999987533210 0111222222222 34457899999999999997
Q ss_pred CCC--CCc-eEEEe-CCCcC-HHHHHHHHHHhCCCCC
Q 025065 179 VPK--ASG-RYLLA-GSVAQ-HSDILKFLREHYPTLL 210 (258)
Q Consensus 179 ~~~--~~~-~~~~~-~~~~t-~~e~~~~i~~~~~~~~ 210 (258)
... ..| .++++ |...+ ..++++.+.+.++...
T Consensus 240 ~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 240 DAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp GGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred cccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 643 356 56665 44555 6788888888776543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-21 Score=154.56 Aligned_cols=178 Identities=17% Similarity=0.149 Sum_probs=130.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|++|||||+|+||++++++|+++|++|++++++..+........+.....++.++++|++|.+++.++++ +
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999999999988765332222222222224578899999999998888775 7
Q ss_pred CcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||....... ... ..|+.+|...+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 162 (246)
T 3osu_A 83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI 162 (246)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence 8999999998643211 111 67999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 184 (258)
.+++.++.+ +|+++.+++||.++++..... .......+..+. ....+.+++|+|++++.++..+. ..|
T Consensus 163 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~----p~~r~~~~~dva~~v~~l~s~~~~~itG 235 (246)
T 3osu_A 163 GLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQI----PLARFGQDTDIANTVAFLASDKAKYITG 235 (246)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS---CHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHHhcccCeEEEEEEECCCcCCccccc---CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCCCC
Confidence 999988874 589999999999998864432 223334444433 34457899999999999987643 346
Q ss_pred -eEEEeCC
Q 025065 185 -RYLLAGS 191 (258)
Q Consensus 185 -~~~~~~~ 191 (258)
.+++++.
T Consensus 236 ~~i~vdgG 243 (246)
T 3osu_A 236 QTIHVNGG 243 (246)
T ss_dssp CEEEESTT
T ss_pred CEEEeCCC
Confidence 5566543
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=161.33 Aligned_cols=184 Identities=16% Similarity=0.172 Sum_probs=129.6
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc-CCcEEEEEccCCCcccHHHHhC--
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
|++.+++|++|||||+|+||++++++|+++|++|++++|+...... ...++... ..++.++++|+++++++.++++
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (263)
T 3ai3_A 1 MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHE-AARSLKEKFGVRVLEVAVDVATPEGVDAVVESV 79 (263)
T ss_dssp CCCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4445678999999999999999999999999999999987533211 11111111 2468899999999998888775
Q ss_pred -----CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHH
Q 025065 79 -----GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~ 103 (258)
++|+|||+||...... .... ..|+.
T Consensus 80 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 159 (263)
T 3ai3_A 80 RSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNV 159 (263)
T ss_dssp HHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHH
Confidence 7999999999754211 1111 57999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--------ccHHHHHHHHcC-CCCCCCCcceeeHHHHHH
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLING-DQSFAFPYIFVEIRDVVY 171 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~g-~~~~~~~~~~i~v~D~a~ 171 (258)
+|...+.+++.++.+ +|++++++|||.++++....... ........+... . ....+.+++|+|+
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~dvA~ 235 (263)
T 3ai3_A 160 TKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHA----PIKRFASPEELAN 235 (263)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHC----TTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCC----CCCCCcCHHHHHH
Confidence 999999999998876 58999999999999975321100 011111222211 1 2346899999999
Q ss_pred HHHHhhcCCC--CCc-eEEEeC
Q 025065 172 AHIRALEVPK--ASG-RYLLAG 190 (258)
Q Consensus 172 ~~~~~~~~~~--~~~-~~~~~~ 190 (258)
+++.++..+. ..| .+++++
T Consensus 236 ~~~~l~s~~~~~~~G~~~~vdg 257 (263)
T 3ai3_A 236 FFVFLCSERATYSVGSAYFVDG 257 (263)
T ss_dssp HHHHHTSTTCTTCCSCEEEEST
T ss_pred HHHHHcCccccCCCCcEEEECC
Confidence 9999997643 345 565554
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=154.80 Aligned_cols=182 Identities=20% Similarity=0.107 Sum_probs=130.1
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC--
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
|+..+++|++|||||+|+||++++++|+++|++|++++|+.+.... ....+.. ...++.++.+|+++++++.++++
T Consensus 1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (248)
T 2pnf_A 1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKA-VAEEIANKYGVKAHGVEMNLLSEESINKAFEEI 79 (248)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHHHhhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 4555678999999999999999999999999999999997533211 1111110 12468899999999999888775
Q ss_pred -----CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHH
Q 025065 79 -----GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~ 103 (258)
++|+|||+||...... .... ..|+.
T Consensus 80 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~ 159 (248)
T 2pnf_A 80 YNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYST 159 (248)
T ss_dssp HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHH
Confidence 7999999999754321 1111 57999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+++.++.+ .+++++++||+.++++..... ............ ....+++++|+|+++..++..+
T Consensus 160 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~ 232 (248)
T 2pnf_A 160 TKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL---SEEIKQKYKEQI----PLGRFGSPEEVANVVLFLCSEL 232 (248)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTC----TTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc---cHHHHHHHHhcC----CCCCccCHHHHHHHHHHHhCch
Confidence 999999999888765 489999999999998864321 111222222221 2345889999999999998753
Q ss_pred --CCCc-eEEEeCC
Q 025065 181 --KASG-RYLLAGS 191 (258)
Q Consensus 181 --~~~~-~~~~~~~ 191 (258)
...| .|++++.
T Consensus 233 ~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 233 ASYITGEVIHVNGG 246 (248)
T ss_dssp GTTCCSCEEEESTT
T ss_pred hhcCCCcEEEeCCC
Confidence 2345 6666543
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=157.34 Aligned_cols=178 Identities=16% Similarity=0.144 Sum_probs=128.4
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+...... ...++ ..++.++++|+++++++.++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQ-AAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999999987543221 11111 3468899999999998888776
Q ss_pred -CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||...... .... ..|+.+|.
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 160 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKA 160 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHH
Confidence 7999999999854321 1111 67999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-----CCCC---CCcceeeHHHHHHHHHH
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-----QSFA---FPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-----~~~~---~~~~~i~v~D~a~~~~~ 175 (258)
..+.+++.++.+. |+++.+++||.|+++..... ...+....... ..+. +...+.+++|+|++++.
T Consensus 161 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~ 236 (259)
T 4e6p_A 161 AVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV----DALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIF 236 (259)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH----HHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh----hhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 9999999988764 89999999999998853211 00111111100 0000 45679999999999999
Q ss_pred hhcCCC--CCc-eEEEeC
Q 025065 176 ALEVPK--ASG-RYLLAG 190 (258)
Q Consensus 176 ~~~~~~--~~~-~~~~~~ 190 (258)
++.... ..| .+++++
T Consensus 237 L~s~~~~~itG~~i~vdg 254 (259)
T 4e6p_A 237 LASAESDYIVSQTYNVDG 254 (259)
T ss_dssp TTSGGGTTCCSCEEEEST
T ss_pred HhCCccCCCCCCEEEECc
Confidence 886542 345 666654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=159.59 Aligned_cols=196 Identities=16% Similarity=0.151 Sum_probs=126.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccc---cCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL---DGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
|++|++|||||+|+||++++++|+++|++|++++|+...... ...++ .....++.++.+|+++++++.++++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEE-TRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999997533211 11111 1113468899999999998888776
Q ss_pred ---CCcEEEecCCCCCCC---CC----Cch-----------------------------------------------hhH
Q 025065 79 ---GCDGVFHTASPVIFL---SD----NPQ-----------------------------------------------EWY 101 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~---~~----~~~-----------------------------------------------~~Y 101 (258)
++|+|||+||..... .. ... ..|
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y 162 (278)
T 1spx_A 83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYY 162 (278)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHH
T ss_pred HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCccHH
Confidence 799999999975321 11 111 469
Q ss_pred HHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC---Ccc---HHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 102 SLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL---NFG---AEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~---~~~---~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
+.+|...+.+++.++.+ +|++++++|||.++++...... ... ......+.... ....+.+++|+|++
T Consensus 163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~dvA~~ 238 (278)
T 1spx_A 163 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV----PAGVMGQPQDIAEV 238 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHC----TTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcC----CCcCCCCHHHHHHH
Confidence 99999999999988765 5899999999999988533210 000 00011211111 23358899999999
Q ss_pred HHHhhcCCC---CCc-eEEEe-CCCcCHHHHHHHHHHhC
Q 025065 173 HIRALEVPK---ASG-RYLLA-GSVAQHSDILKFLREHY 206 (258)
Q Consensus 173 ~~~~~~~~~---~~~-~~~~~-~~~~t~~e~~~~i~~~~ 206 (258)
++.++..+. ..| .+.++ |...++.|+++.+.+..
T Consensus 239 v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 239 IAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred HHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 999987542 346 56555 56889999999887653
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-22 Score=158.70 Aligned_cols=186 Identities=18% Similarity=0.112 Sum_probs=125.1
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcC-------CcEEEEEccCCCcccHH
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-------ERLHLFKANLLEEGSFD 74 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~ 74 (258)
|+..|++++||||||+|+||++++++|+++|++|++++|+.+.... ....+.... .++.++.+|+++++++.
T Consensus 1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 79 (264)
T 2pd6_A 1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQE-TVRLLGGPGSKEGPPRGNHAAFQADVSEARAAR 79 (264)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTC------------CCEEEECCTTSHHHHH
T ss_pred CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHHHhcCccccccCcceEEEEecCCCHHHHH
Confidence 4445678999999999999999999999999999999987543211 111111111 46789999999998888
Q ss_pred HHhCC-------C-cEEEecCCCCCCCC---CCch---------------------------------------------
Q 025065 75 SAVDG-------C-DGVFHTASPVIFLS---DNPQ--------------------------------------------- 98 (258)
Q Consensus 75 ~~~~~-------~-d~Vih~a~~~~~~~---~~~~--------------------------------------------- 98 (258)
+++++ + |+|||+||...... ....
T Consensus 80 ~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 159 (264)
T 2pd6_A 80 CLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN 159 (264)
T ss_dssp HHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC
T ss_pred HHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC
Confidence 77653 4 99999999754211 0100
Q ss_pred ---hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 99 ---EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 99 ---~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
..|+.+|...+.+++.++.+ +|++++++|||.++++...... ......+..+. ....+.+++|+|++
T Consensus 160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~----~~~~~~~~~dva~~ 232 (264)
T 2pd6_A 160 VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP---QKVVDKITEMI----PMGHLGDPEDVADV 232 (264)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGC----TTCSCBCHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC---HHHHHHHHHhC----CCCCCCCHHHHHHH
Confidence 57999999999999998877 6999999999999998643210 01111111111 23457899999999
Q ss_pred HHHhhcCCC--CCc-eEEEeC-CCcCH
Q 025065 173 HIRALEVPK--ASG-RYLLAG-SVAQH 195 (258)
Q Consensus 173 ~~~~~~~~~--~~~-~~~~~~-~~~t~ 195 (258)
++.++..+. ..| .+.+++ ..++.
T Consensus 233 ~~~l~~~~~~~~~G~~~~v~gg~~~~~ 259 (264)
T 2pd6_A 233 VAFLASEDSGYITGTSVEVTGGLFMAE 259 (264)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTC----
T ss_pred HHHHcCCcccCCCCCEEEECCCceecc
Confidence 999987532 345 555554 34433
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.5e-21 Score=152.34 Aligned_cols=178 Identities=19% Similarity=0.170 Sum_probs=128.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccc-cCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
+|++|||||+|+||++++++|+++|++|++++|+.+.... ....+ ...+.++.++.+|+++++++.++++ +
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEE-TARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999987543211 11111 1123568999999999999888775 7
Q ss_pred CcEEEecCCCCCCCC------CCch-----------------------------------------------hhHHHHHH
Q 025065 80 CDGVFHTASPVIFLS------DNPQ-----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~------~~~~-----------------------------------------------~~Y~~sK~ 106 (258)
+|+|||+||...... .... ..|+.+|.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (250)
T 2cfc_A 81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG 160 (250)
T ss_dssp CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence 999999999754321 0111 57999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-- 181 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~-- 181 (258)
..|.+++.++.+. |++++++|||.++++....... ...+...+..+. ....+.+++|+|++++.++..+.
T Consensus 161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~ 235 (250)
T 2cfc_A 161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD-QPELRDQVLARI----PQKEIGTAAQVADAVMFLAGEDATY 235 (250)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT-SHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHHSTTCTT
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC-CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCchhhc
Confidence 9999999988764 8999999999999986432111 112223333322 23457899999999999998653
Q ss_pred CCc-eEEEeCC
Q 025065 182 ASG-RYLLAGS 191 (258)
Q Consensus 182 ~~~-~~~~~~~ 191 (258)
..| .+.+++.
T Consensus 236 ~~G~~~~v~gG 246 (250)
T 2cfc_A 236 VNGAALVMDGA 246 (250)
T ss_dssp CCSCEEEESTT
T ss_pred ccCCEEEECCc
Confidence 346 4555543
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=157.63 Aligned_cols=182 Identities=19% Similarity=0.154 Sum_probs=128.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+||||||+|+||++++++|+++|++|++++|+...........+...+.++.++.+|+++++++.++++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999843221111111221123568899999999999888776
Q ss_pred CCcEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+||...... .... ..|+.+|...|
T Consensus 99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~ 178 (274)
T 1ja9_A 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVE 178 (274)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCCCchHHHHHHHHH
Confidence 7899999999753211 0000 56999999999
Q ss_pred HHHHHHHHHc---CCcEEEEcCCccccCCcCCC----C-----Ccc-HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 110 EAAWKFAKEN---GIDLVAIHPGTVIGPFFQPI----L-----NFG-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 110 ~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~----~-----~~~-~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.+++.++.+. +++++++|||.++++..... . ... .........+. ....+++++|+|++++.+
T Consensus 179 ~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~i~~l 254 (274)
T 1ja9_A 179 GFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN----PLKRIGYPADIGRAVSAL 254 (274)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS----TTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC----CCCCccCHHHHHHHHHHH
Confidence 9999988764 89999999999988743210 0 011 12222222222 345689999999999999
Q ss_pred hcCCC--CCc-eEEEeCC
Q 025065 177 LEVPK--ASG-RYLLAGS 191 (258)
Q Consensus 177 ~~~~~--~~~-~~~~~~~ 191 (258)
+..+. ..| .|++++.
T Consensus 255 ~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 255 CQEESEWINGQVIKLTGG 272 (274)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred hCcccccccCcEEEecCC
Confidence 97643 245 6666654
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.4e-21 Score=152.11 Aligned_cols=179 Identities=16% Similarity=0.056 Sum_probs=122.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++++...........+.....++.++.+|+++++++.++++
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG 82 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999999999985433322111111111123568999999999998888775
Q ss_pred CCcEEEecCCCCCCC------CCCch--------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFL------SDNPQ--------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~------~~~~~--------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||..... ..... ..|+.+|...
T Consensus 83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 162 (247)
T 2hq1_A 83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGL 162 (247)
T ss_dssp CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHH
Confidence 799999999975321 11111 6799999999
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
|.+++.++.+. ++++++++||.+.++..... .......+..+. ....+++++|+|+++..++..+. ..
T Consensus 163 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~ 235 (247)
T 2hq1_A 163 IGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL---PDKVKEMYLNNI----PLKRFGTPEEVANVVGFLASDDSNYIT 235 (247)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc---chHHHHHHHhhC----CCCCCCCHHHHHHHHHHHcCccccccc
Confidence 99999887764 89999999999987642211 111222233322 23458899999999999887542 34
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .|++++.
T Consensus 236 G~~~~v~gG 244 (247)
T 2hq1_A 236 GQVINIDGG 244 (247)
T ss_dssp SCEEEESTT
T ss_pred CcEEEeCCC
Confidence 5 6666543
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-21 Score=154.69 Aligned_cols=182 Identities=18% Similarity=0.145 Sum_probs=125.5
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|+...++|++|||||+|+||++++++|+++|++|++++|+.................++.++++|+++++++.++++
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 80 (264)
T 3i4f_A 1 MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAM 80 (264)
T ss_dssp -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 34334578999999999999999999999999999998876443221112222224578999999999999888775
Q ss_pred ----CCcEEEecCCCC--CCCC---CCch-------------------------------------------------hh
Q 025065 79 ----GCDGVFHTASPV--IFLS---DNPQ-------------------------------------------------EW 100 (258)
Q Consensus 79 ----~~d~Vih~a~~~--~~~~---~~~~-------------------------------------------------~~ 100 (258)
++|+|||+||.. .... .... ..
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~ 160 (264)
T 3i4f_A 81 SHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSA 160 (264)
T ss_dssp HHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHH
T ss_pred HHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCch
Confidence 789999999942 1111 1111 57
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 101 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
|+.+|...+.+++.++.+ .|+++++++||.|+++..... ... ......... ....+.+++|+|++++.++
T Consensus 161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~-~~~~~~~~~---p~~r~~~~~dva~~v~~l~ 233 (264)
T 3i4f_A 161 FAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT---IQE-ARQLKEHNT---PIGRSGTGEDIARTISFLC 233 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC---HHH-HHHC-----------CCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc---cHH-HHHHHhhcC---CCCCCcCHHHHHHHHHHHc
Confidence 999999999999988877 689999999999998864432 111 111111111 2345789999999999999
Q ss_pred cCCC--CCc-eEEEeC
Q 025065 178 EVPK--ASG-RYLLAG 190 (258)
Q Consensus 178 ~~~~--~~~-~~~~~~ 190 (258)
..+. ..| ++.++|
T Consensus 234 s~~~~~itG~~i~vdG 249 (264)
T 3i4f_A 234 EDDSDMITGTIIEVTG 249 (264)
T ss_dssp SGGGTTCCSCEEEESC
T ss_pred CcccCCCCCcEEEEcC
Confidence 8643 356 555554
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-21 Score=155.47 Aligned_cols=180 Identities=17% Similarity=0.098 Sum_probs=126.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEc-CCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVR-DPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|+||||||+|+||++++++|+++|++|++++| +.+.. ......+.....++.++.+|+++++++.++++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEA-NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHH-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999998 43221 11111121123468899999999998887775
Q ss_pred -CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||...... .... ..|+.+|.
T Consensus 84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 163 (261)
T 1gee_A 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKG 163 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHH
Confidence 7899999999753211 1110 57999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
+.+.+++.++.+. +++++++|||.++++...... ........+.... ....+.+++|+|++++.++..+ .
T Consensus 164 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~ 238 (261)
T 1gee_A 164 GMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMI----PMGYIGEPEEIAAVAAWLASSEASY 238 (261)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTC----TTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcc-cChhHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccC
Confidence 9999998887664 899999999999988532110 0111222222221 2345889999999999998753 2
Q ss_pred CCc-eEEEeCC
Q 025065 182 ASG-RYLLAGS 191 (258)
Q Consensus 182 ~~~-~~~~~~~ 191 (258)
..| .+.+++.
T Consensus 239 ~~G~~~~v~gg 249 (261)
T 1gee_A 239 VTGITLFADGG 249 (261)
T ss_dssp CCSCEEEESTT
T ss_pred CCCcEEEEcCC
Confidence 345 5555543
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=150.25 Aligned_cols=177 Identities=21% Similarity=0.204 Sum_probs=123.3
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+.+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++ ..++.++++|+++++++.++++
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEE-PAAEL---GAAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999998765422 11111 3468899999999998888775
Q ss_pred --CCcEEEecCCCCCCCCC-------Cch---------------------------------------------------
Q 025065 79 --GCDGVFHTASPVIFLSD-------NPQ--------------------------------------------------- 98 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~-------~~~--------------------------------------------------- 98 (258)
++|++||+||....... ...
T Consensus 79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tpc_A 79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI 158 (257)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence 79999999998643211 001
Q ss_pred --hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 99 --EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 99 --~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
..|+.+|...+.+++.++.+ +|+++.+++||.|.++....... ..... .... .|....+..++|+|+++
T Consensus 159 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~~-~~~~--~p~~~r~~~~~dva~~v 232 (257)
T 3tpc_A 159 GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ---DVQDA-LAAS--VPFPPRLGRAEEYAALV 232 (257)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------CC--SSSSCSCBCHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH---HHHHH-HHhc--CCCCCCCCCHHHHHHHH
Confidence 57999999999999988877 68999999999999875432111 01111 1111 11114688999999999
Q ss_pred HHhhcCCCCCc-eEEEeC
Q 025065 174 IRALEVPKASG-RYLLAG 190 (258)
Q Consensus 174 ~~~~~~~~~~~-~~~~~~ 190 (258)
..++......| .+.++|
T Consensus 233 ~~l~s~~~itG~~i~vdG 250 (257)
T 3tpc_A 233 KHICENTMLNGEVIRLDG 250 (257)
T ss_dssp HHHHHCTTCCSCEEEEST
T ss_pred HHHcccCCcCCcEEEECC
Confidence 99998866677 445554
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=152.71 Aligned_cols=179 Identities=17% Similarity=0.128 Sum_probs=129.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++++..+.......++.....++.++.+|+++++++.++++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999987765332222222222224578999999999998888775
Q ss_pred -CCcEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||...... .... ..|+.+|...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~ 187 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAAL 187 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHHH
Confidence 7899999999854321 1111 5799999999
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCC
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KAS 183 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 183 (258)
+.+++.++.+. |+++..++||.|.++........ ........ ....+..++|+|++++.++... ...
T Consensus 188 ~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~----~~~~~~~~----~~~r~~~pedvA~~v~fL~s~~~~~it 259 (271)
T 3v2g_A 188 AGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDH----AEAQRERI----ATGSYGEPQDIAGLVAWLAGPQGKFVT 259 (271)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSS----HHHHHHTC----TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchh----HHHHHhcC----CCCCCCCHHHHHHHHHHHhCcccCCcc
Confidence 99999988764 89999999999998864432211 11222221 2334779999999999998643 345
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.++|.
T Consensus 260 G~~i~vdGG 268 (271)
T 3v2g_A 260 GASLTIDGG 268 (271)
T ss_dssp SCEEEESTT
T ss_pred CCEEEeCcC
Confidence 6 4555543
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=7.1e-21 Score=153.81 Aligned_cols=178 Identities=19% Similarity=0.117 Sum_probs=129.0
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
...+++|++|||||+|+||++++++|+++|++|++++|+...........+.....++.++++|++|++++.++++
T Consensus 23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE 102 (269)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3446789999999999999999999999999999998854332222222222224578999999999998887765
Q ss_pred ---CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHH
Q 025065 79 ---GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK 105 (258)
++|+|||+||....... ... ..|+.+|
T Consensus 103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 182 (269)
T 4dmm_A 103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAK 182 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHH
Confidence 68999999998643211 111 6799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK- 181 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~- 181 (258)
...+.+.+.++.+ +|+++.+++||.|.++..... ......... ....+.+++|+|++++.++..+.
T Consensus 183 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~~~~~~~~----p~~r~~~~~dvA~~v~~l~s~~~~ 252 (269)
T 4dmm_A 183 AGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL------AAEKLLEVI----PLGRYGEAAEVAGVVRFLAADPAA 252 (269)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH------HHHHHGGGC----TTSSCBCHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc------cHHHHHhcC----CCCCCCCHHHHHHHHHHHhCCccc
Confidence 9999999988876 589999999999988753211 112222221 33457899999999999998742
Q ss_pred --CCc-eEEEeC
Q 025065 182 --ASG-RYLLAG 190 (258)
Q Consensus 182 --~~~-~~~~~~ 190 (258)
..| .++++|
T Consensus 253 ~~itG~~i~vdG 264 (269)
T 4dmm_A 253 AYITGQVINIDG 264 (269)
T ss_dssp GGCCSCEEEEST
T ss_pred CCCcCCEEEECC
Confidence 346 555554
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.7e-20 Score=149.20 Aligned_cols=180 Identities=18% Similarity=0.097 Sum_probs=131.8
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|...+++|++|||||+|+||++++++|+++|++|++++|+...... ....+ ..++.++.+|+++++++.++++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (271)
T 3tzq_B 5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAG-AAASV---GRGAVHHVVDLTNEVSVRALIDFTI 80 (271)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHH-HHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHh---CCCeEEEECCCCCHHHHHHHHHHHH
Confidence 3445678999999999999999999999999999999998654322 11111 3568899999999998888776
Q ss_pred ----CCcEEEecCCCCCCCC-----CCch-----------------------------------------------hhHH
Q 025065 79 ----GCDGVFHTASPVIFLS-----DNPQ-----------------------------------------------EWYS 102 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~-----~~~~-----------------------------------------------~~Y~ 102 (258)
++|++||+||...... .... ..|+
T Consensus 81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~ 160 (271)
T 3tzq_B 81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYA 160 (271)
T ss_dssp HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHH
Confidence 7899999999863211 1111 6799
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+|...+.+++.++.+ +|+++.+++||.|+++...... .......+.... ....+..++|+|++++.++..
T Consensus 161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~----~~~r~~~p~dvA~~v~~L~s~ 234 (271)
T 3tzq_B 161 CTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL--PQPIVDIFATHH----LAGRIGEPHEIAELVCFLASD 234 (271)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC--CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999887 6899999999999998654221 122223322222 233577999999999999976
Q ss_pred CC--CCc-eEEEeCC
Q 025065 180 PK--ASG-RYLLAGS 191 (258)
Q Consensus 180 ~~--~~~-~~~~~~~ 191 (258)
.. ..| .+.+++.
T Consensus 235 ~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 235 RAAFITGQVIAADSG 249 (271)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred ccCCcCCCEEEECCC
Confidence 43 456 5566654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=151.54 Aligned_cols=177 Identities=17% Similarity=0.146 Sum_probs=130.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcC-CcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.... .++.++++|+++++++.++++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDA-CVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999987644321 112222212 578999999999998887765
Q ss_pred -CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~ 106 (258)
++|++||+||....... ... ..|+.+|.
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~ 166 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKA 166 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHH
Confidence 79999999998643211 111 57999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-- 181 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~-- 181 (258)
..+.+++.++.+ +|+++.+++||.|+++..... .......+.... ....+..++|+|+++..++....
T Consensus 167 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~----p~~r~~~p~dva~~v~~L~s~~~~~ 239 (262)
T 3pk0_A 167 AQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---GEEYIASMARSI----PAGALGTPEDIGHLAAFLATKEAGY 239 (262)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---CHHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccC
Confidence 999999999887 689999999999998754322 122333333322 23347899999999999987543
Q ss_pred CCc-eEEEeC
Q 025065 182 ASG-RYLLAG 190 (258)
Q Consensus 182 ~~~-~~~~~~ 190 (258)
..| .+.++|
T Consensus 240 itG~~i~vdG 249 (262)
T 3pk0_A 240 ITGQAIAVDG 249 (262)
T ss_dssp CCSCEEEEST
T ss_pred CcCCEEEECC
Confidence 456 555554
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.8e-21 Score=152.97 Aligned_cols=177 Identities=14% Similarity=0.114 Sum_probs=126.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcE-EEEEccCCCcccHHHHh------C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL-HLFKANLLEEGSFDSAV------D 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~------~ 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++ ..++ .++.+|+++++++.+++ .
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDR-AAQEL---GAAVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---cccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 467899999999999999999999999999999997543211 11111 2345 88999999999888776 4
Q ss_pred CCcEEEecCCCCCCCC---CCch-------------------------------------------------hhHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-------------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||...... .... +.|+.+|.
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~ 164 (254)
T 2wsb_A 85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKG 164 (254)
T ss_dssp CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHH
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHH
Confidence 7899999999754311 1111 46999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
+.|.+++.++.+. |++++++|||.++++...... ........+.... ....+.+++|+|++++.++..+ .
T Consensus 165 a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~ 239 (254)
T 2wsb_A 165 AVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-ERPELFETWLDMT----PMGRCGEPSEIAAAALFLASPAASY 239 (254)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-TCHHHHHHHHHTS----TTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-cChHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCccccc
Confidence 9999999888764 899999999999987532110 0112223333322 2345889999999999998753 2
Q ss_pred CCc-eEEEeCC
Q 025065 182 ASG-RYLLAGS 191 (258)
Q Consensus 182 ~~~-~~~~~~~ 191 (258)
..| .+.+++.
T Consensus 240 ~~G~~~~v~gG 250 (254)
T 2wsb_A 240 VTGAILAVDGG 250 (254)
T ss_dssp CCSCEEEESTT
T ss_pred ccCCEEEECCC
Confidence 356 5565554
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=7.2e-21 Score=149.37 Aligned_cols=155 Identities=17% Similarity=0.120 Sum_probs=114.5
Q ss_pred CcEEEEECCcchHHHHHHHHHH-HCCCEEEEEEcCCC-CccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLL-QRGYTVKATVRDPN-SPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
||+||||||+|+||++++++|+ ++|++|++++|++. ... .+.....++.++++|++|++++.++++++|+|||
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIP-----PEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSC-----HHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccch-----hhccCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 4669999999999999999999 89999999999764 321 1100135789999999999999999999999999
Q ss_pred cCCCCCCC-----------CCC--------------ch-h----------hHHHHHHHHHHHHHHHHHHcCCcEEEEcCC
Q 025065 86 TASPVIFL-----------SDN--------------PQ-E----------WYSLAKTLAEEAAWKFAKENGIDLVAIHPG 129 (258)
Q Consensus 86 ~a~~~~~~-----------~~~--------------~~-~----------~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~ 129 (258)
+|+..... ... +. . .|+.+|..+|.++ ++.+++++++||+
T Consensus 80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~----~~~~i~~~~vrpg 155 (221)
T 3r6d_A 80 GAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVL----RESNLNYTILRLT 155 (221)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHH----HHSCSEEEEEEEC
T ss_pred cCCCCChhHHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHH----HhCCCCEEEEech
Confidence 99862111 000 00 1 8999999999885 3579999999999
Q ss_pred ccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh--cCCC
Q 025065 130 TVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL--EVPK 181 (258)
Q Consensus 130 ~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~--~~~~ 181 (258)
.++++........ ..... +....+++.+|+|++++.++ .++.
T Consensus 156 ~v~~~~~~~~~~~--------~~~~~--~~~~~~~~~~dvA~~~~~l~~~~~~~ 199 (221)
T 3r6d_A 156 WLYNDPEXTDYEL--------IPEGA--QFNDAQVSREAVVKAIFDILHAADET 199 (221)
T ss_dssp EEECCTTCCCCEE--------ECTTS--CCCCCEEEHHHHHHHHHHHHTCSCCG
T ss_pred hhcCCCCCcceee--------ccCCc--cCCCceeeHHHHHHHHHHHHHhcChh
Confidence 9998732211100 00100 02234899999999999999 7765
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=152.00 Aligned_cols=180 Identities=18% Similarity=0.159 Sum_probs=121.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..+.......++.....++.++++|++|++++.++++
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999754332222222222224578999999999999888776
Q ss_pred CCcEEEecCCCCCCCC-----CCch--------------------------------------------------hhHHH
Q 025065 79 GCDGVFHTASPVIFLS-----DNPQ--------------------------------------------------EWYSL 103 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~-----~~~~--------------------------------------------------~~Y~~ 103 (258)
++|+|||+||...... .... ..|+.
T Consensus 107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a 186 (280)
T 4da9_A 107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCM 186 (280)
T ss_dssp CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHH
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHH
Confidence 7899999999832111 0111 67999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+++.++.+ +|+++..++||.|.++........ .......+. . ....+..++|+|++++.++...
T Consensus 187 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~--~-p~~r~~~pedvA~~v~~L~s~~ 260 (280)
T 4da9_A 187 SKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK---YDGLIESGL--V-PMRRWGEPEDIGNIVAGLAGGQ 260 (280)
T ss_dssp HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------CCBCHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh---HHHHHhhcC--C-CcCCcCCHHHHHHHHHHHhCcc
Confidence 999999999998877 589999999999988753321110 011111111 1 2345789999999999999765
Q ss_pred C--CCc-eEEEeCC
Q 025065 181 K--ASG-RYLLAGS 191 (258)
Q Consensus 181 ~--~~~-~~~~~~~ 191 (258)
. ..| .+.++|.
T Consensus 261 ~~~itG~~i~vdGG 274 (280)
T 4da9_A 261 FGFATGSVIQADGG 274 (280)
T ss_dssp TGGGTTCEEEESTT
T ss_pred ccCCCCCEEEECCC
Confidence 4 456 4555543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-21 Score=149.47 Aligned_cols=145 Identities=17% Similarity=0.158 Sum_probs=113.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC---CcEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG---CDGVF 84 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~Vi 84 (258)
+|+||||||+|+||++++++|+ +|++|++++|+.. .+.+|+++++++.+++++ +|+||
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~~d~vi 63 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDITNIDSIKKMYEQVGKVDAIV 63 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------SEECCTTCHHHHHHHHHHHCCEEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------ceeeecCCHHHHHHHHHHhCCCCEEE
Confidence 3589999999999999999999 9999999998752 367999999999888764 89999
Q ss_pred ecCCCCCCCC---CCch---------------------------------------------hhHHHHHHHHHHHHHHHH
Q 025065 85 HTASPVIFLS---DNPQ---------------------------------------------EWYSLAKTLAEEAAWKFA 116 (258)
Q Consensus 85 h~a~~~~~~~---~~~~---------------------------------------------~~Y~~sK~~~e~~~~~~~ 116 (258)
|+||...... .... ..|+.+|...|.+++.++
T Consensus 64 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~ 143 (202)
T 3d7l_A 64 SATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAA 143 (202)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHT
T ss_pred ECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9999753211 1110 579999999999999887
Q ss_pred HHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEE
Q 025065 117 KEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLL 188 (258)
Q Consensus 117 ~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~ 188 (258)
.+. |++++++||+.++++... ...+. ..+++++++|+|++++.++... ..| .|++
T Consensus 144 ~e~~~gi~v~~v~pg~v~~~~~~------------~~~~~----~~~~~~~~~dva~~~~~~~~~~-~~G~~~~v 201 (202)
T 3d7l_A 144 IEMPRGIRINTVSPNVLEESWDK------------LEPFF----EGFLPVPAAKVARAFEKSVFGA-QTGESYQV 201 (202)
T ss_dssp TSCSTTCEEEEEEECCBGGGHHH------------HGGGS----TTCCCBCHHHHHHHHHHHHHSC-CCSCEEEE
T ss_pred HHccCCeEEEEEecCccCCchhh------------hhhhc----cccCCCCHHHHHHHHHHhhhcc-ccCceEec
Confidence 663 899999999999987421 11111 3467899999999999988543 344 5543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-22 Score=160.11 Aligned_cols=169 Identities=21% Similarity=0.112 Sum_probs=120.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----CCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----GCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~V 83 (258)
||+||||||+|+||++++++|+++|++|++++|+.+.... .+.+|+++++++.++++ ++|+|
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~D~~~~~~~~~~~~~~~~~~d~v 66 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------DLSTPGGRETAVAAVLDRCGGVLDGL 66 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------CTTSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------------cccCCcccHHHHHHHHHHcCCCccEE
Confidence 3689999999999999999999999999999997644211 15689999988888876 79999
Q ss_pred EecCCCCCCCCCCch----------------------------------------h------------------------
Q 025065 84 FHTASPVIFLSDNPQ----------------------------------------E------------------------ 99 (258)
Q Consensus 84 ih~a~~~~~~~~~~~----------------------------------------~------------------------ 99 (258)
||+||..... .... .
T Consensus 67 i~~Ag~~~~~-~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (255)
T 2dkn_A 67 VCCAGVGVTA-ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQ 145 (255)
T ss_dssp EECCCCCTTS-SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHH
T ss_pred EECCCCCCcc-hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccc
Confidence 9999975411 1111 1
Q ss_pred ------hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHH
Q 025065 100 ------WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVV 170 (258)
Q Consensus 100 ------~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a 170 (258)
.|+.+|.+.|.+++.++.+ +|++++++||+.++|+......... ......... .+...++++++|+|
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~dva 221 (255)
T 2dkn_A 146 QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADP--RYGESTRRF--VAPLGRGSEPREVA 221 (255)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCT--TTHHHHHSC--CCTTSSCBCHHHHH
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccch--hhHHHHHHH--HHHhcCCCCHHHHH
Confidence 4999999999999888766 6999999999999998532110000 000111100 00234689999999
Q ss_pred HHHHHhhcCC--CCCc-eEEEe-CCCcCH
Q 025065 171 YAHIRALEVP--KASG-RYLLA-GSVAQH 195 (258)
Q Consensus 171 ~~~~~~~~~~--~~~~-~~~~~-~~~~t~ 195 (258)
++++.++..+ ...| .|+++ +...++
T Consensus 222 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~ 250 (255)
T 2dkn_A 222 EAIAFLLGPQASFIHGSVLFVDGGMDALM 250 (255)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTHHHHH
T ss_pred HHHHHHhCCCcccceeeEEEecCCeEeee
Confidence 9999999875 3445 66665 444444
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=150.68 Aligned_cols=174 Identities=20% Similarity=0.185 Sum_probs=127.2
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|+..+++|++|||||+|+||++++++|+++|++|++++|+.+.... ....+ ...+.++++|+++++++.++++
T Consensus 1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~ 76 (260)
T 1nff_A 1 MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKA-MAAEL---ADAARYVHLDVTQPAQWKAAVDTAV 76 (260)
T ss_dssp -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHT---GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---hcCceEEEecCCCHHHHHHHHHHHH
Confidence 4445678999999999999999999999999999999987533211 11111 1347889999999999888876
Q ss_pred ----CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHH
Q 025065 79 ----GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~s 104 (258)
++|+|||+||...... .... ..|+.+
T Consensus 77 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 156 (260)
T 1nff_A 77 TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTAT 156 (260)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHH
Confidence 7999999999754311 1111 579999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
|...+.+++.++.+ +|++++++|||.++++..... .. . .. . . ....+.+++|+|+++..++..+.
T Consensus 157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~------~-~~-~--~-~~~~~~~~~dvA~~v~~l~s~~~ 224 (260)
T 1nff_A 157 KFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV-PE------D-IF-Q--T-ALGRAAEPVEVSNLVVYLASDES 224 (260)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS-CT------T-CS-C--C-SSSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccc-hh------h-HH-h--C-ccCCCCCHHHHHHHHHHHhCccc
Confidence 99999999988876 589999999999999853310 00 0 00 1 1 23457899999999999987542
Q ss_pred --CCc-eEEEeCC
Q 025065 182 --ASG-RYLLAGS 191 (258)
Q Consensus 182 --~~~-~~~~~~~ 191 (258)
..| .+.+++.
T Consensus 225 ~~~~G~~~~v~gG 237 (260)
T 1nff_A 225 SYSTGAEFVVDGG 237 (260)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCCcCCEEEECCC
Confidence 345 5666543
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=153.71 Aligned_cols=182 Identities=16% Similarity=0.185 Sum_probs=125.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc-CCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..+.......++... ..++.++.+|+++++++.++++
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 567899999999999999999999999999999985433222112222211 3578999999999998887775
Q ss_pred -CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||....... ... ..|+.+|..
T Consensus 103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 182 (281)
T 3v2h_A 103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHG 182 (281)
T ss_dssp SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHH
Confidence 68999999998543221 111 679999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHH--------HHHH-HHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAE--------VILN-LINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~--------~~~~-~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
.+.+++.++.+ .|+++.+++||.|.++........... .+.. +..+. ....+.+++|+|++++.
T Consensus 183 ~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~~edvA~~v~~ 258 (281)
T 3v2h_A 183 IMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQ----PTKKFITVEQVASLALY 258 (281)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CC----TTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcC----CCCCccCHHHHHHHHHH
Confidence 99999998876 489999999999998754322111000 0000 01111 45679999999999999
Q ss_pred hhcCCC--CCc-eEEEeCC
Q 025065 176 ALEVPK--ASG-RYLLAGS 191 (258)
Q Consensus 176 ~~~~~~--~~~-~~~~~~~ 191 (258)
++.... ..| .+.++|.
T Consensus 259 L~s~~a~~itG~~i~vdGG 277 (281)
T 3v2h_A 259 LAGDDAAQITGTHVSMDGG 277 (281)
T ss_dssp HHSSGGGGCCSCEEEESTT
T ss_pred HcCCCcCCCCCcEEEECCC
Confidence 997653 356 5555543
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=152.61 Aligned_cols=185 Identities=22% Similarity=0.162 Sum_probs=131.0
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||...+++|++|||||+|+||++++++|+++|++|++++|+..... +...++.....++.++.+|+++++++.++++
T Consensus 1 M~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (280)
T 3tox_A 1 MVMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALA-ELTDEIAGGGGEAAALAGDVGDEALHEALVELA 79 (280)
T ss_dssp ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHH-HHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4333467899999999999999999999999999999998754322 1122222234578999999999998887765
Q ss_pred -----CCcEEEecCCCCCC-C---CCCch------------------------------------------------hhH
Q 025065 79 -----GCDGVFHTASPVIF-L---SDNPQ------------------------------------------------EWY 101 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~-~---~~~~~------------------------------------------------~~Y 101 (258)
++|++||+||.... . ..... ..|
T Consensus 80 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y 159 (280)
T 3tox_A 80 VRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPY 159 (280)
T ss_dssp HHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhH
Confidence 68999999997532 1 11111 579
Q ss_pred HHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCC-CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 102 SLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPIL-NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
+.+|...+.+++.++.+. |+++.+++||.|.++...... .........+.... ....+..++|+|++++.++
T Consensus 160 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~ 235 (280)
T 3tox_A 160 AASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH----ALKRIARPEEIAEAALYLA 235 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTS----TTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccC----ccCCCcCHHHHHHHHHHHh
Confidence 999999999999988774 899999999999988543211 11111222222222 2345889999999999999
Q ss_pred cCCC--CCc-eEEEeC
Q 025065 178 EVPK--ASG-RYLLAG 190 (258)
Q Consensus 178 ~~~~--~~~-~~~~~~ 190 (258)
.... ..| .++++|
T Consensus 236 s~~a~~itG~~i~vdG 251 (280)
T 3tox_A 236 SDGASFVTGAALLADG 251 (280)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CccccCCcCcEEEECC
Confidence 7643 456 556654
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.85 E-value=9e-21 Score=150.36 Aligned_cols=164 Identities=15% Similarity=0.198 Sum_probs=114.8
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
.|+||+||||||+|+||++++++|+++| ++|++++|+++.... . ...++.++++|++|++++.++++++|+|
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 92 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-----P--YPTNSQIIMGDVLNHAALKQAMQGQDIV 92 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-----S--CCTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-----c--ccCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence 3567899999999999999999999999 899999998654321 1 1247899999999999999999999999
Q ss_pred EecCCCCCCCCCCch-------------------hhH------------------HHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 84 FHTASPVIFLSDNPQ-------------------EWY------------------SLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 84 ih~a~~~~~~~~~~~-------------------~~Y------------------~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
||+++.......... ..| ...+..+|+. .++.+++++++
T Consensus 93 v~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~gi~~~~v 168 (236)
T 3qvo_A 93 YANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADA----IEASGLEYTIL 168 (236)
T ss_dssp EEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHH----HHTSCSEEEEE
T ss_pred EEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHH----HHHCCCCEEEE
Confidence 999986321000000 111 2334445544 45679999999
Q ss_pred cCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-CCc-eEEEeC
Q 025065 127 HPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-ASG-RYLLAG 190 (258)
Q Consensus 127 Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~~~~~~ 190 (258)
||+.++++...... . ...+.+ ....+++++|+|++++.++.++. ..+ .|.+++
T Consensus 169 rPg~i~~~~~~~~~-~-------~~~~~~---~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~ 223 (236)
T 3qvo_A 169 RPAWLTDEDIIDYE-L-------TSRNEP---FKGTIVSRKSVAALITDIIDKPEKHIGENIGINQ 223 (236)
T ss_dssp EECEEECCSCCCCE-E-------ECTTSC---CSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEEC
T ss_pred eCCcccCCCCcceE-E-------eccCCC---CCCcEECHHHHHHHHHHHHcCcccccCeeEEecC
Confidence 99999987533210 0 001111 22468999999999999999876 344 674443
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.4e-21 Score=152.28 Aligned_cols=180 Identities=17% Similarity=0.127 Sum_probs=127.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++|++|||||+|+||++++++|+++|++|++++|+.+. ....++.....++.++.+|+++++++.++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA---PALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG 78 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH---HHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999987651 1122222223468889999999999988876
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 158 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGV 158 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHH
Confidence 7999999999753211 1111 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHH---H----HHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEV---I----LNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~---~----~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+.+.+.++.+ +|++++++|||.++++............ . ..+..... ....+++++|+|++++.++.
T Consensus 159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~dvA~~~~~l~s 235 (255)
T 2q2v_A 159 VGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQ---PSLAFVTPEHLGELVLFLCS 235 (255)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTC---TTCCCBCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccC---CCCCCcCHHHHHHHHHHHhC
Confidence 9999998877 4799999999999987532100000000 0 11101111 34468999999999999987
Q ss_pred CCC--CCc-eEEEeCC
Q 025065 179 VPK--ASG-RYLLAGS 191 (258)
Q Consensus 179 ~~~--~~~-~~~~~~~ 191 (258)
.+. ..| .+.+++.
T Consensus 236 ~~~~~~tG~~~~vdgG 251 (255)
T 2q2v_A 236 EAGSQVRGAAWNVDGG 251 (255)
T ss_dssp GGGTTCCSCEEEESTT
T ss_pred CccCCCCCCEEEECCC
Confidence 543 345 5555543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-20 Score=149.99 Aligned_cols=179 Identities=15% Similarity=0.079 Sum_probs=129.0
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
++++|++|||||+|+||++++++|+++|++|++++++...........+.....++.++.+|+++++++.++++
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999998876554332222222222224678999999999998887765
Q ss_pred -CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||....... ... ..|+.+|.
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 182 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKA 182 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHH
Confidence 68999999998643211 111 67999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
+.+.+++.++.+. |+++.+++||.|.++..... ........... ....+..++|+|+++..++... .
T Consensus 183 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~----p~~~~~~~edva~~~~~L~s~~~~~ 254 (267)
T 4iiu_A 183 GIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMI----PMKRMGQAEEVAGLASYLMSDIAGY 254 (267)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTC----TTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCCcccC
Confidence 9999988887764 89999999999988754322 22333333332 3345789999999999998753 2
Q ss_pred CCc-eEEEeCC
Q 025065 182 ASG-RYLLAGS 191 (258)
Q Consensus 182 ~~~-~~~~~~~ 191 (258)
..| .+.++|.
T Consensus 255 itG~~i~vdGG 265 (267)
T 4iiu_A 255 VTRQVISINGG 265 (267)
T ss_dssp CCSCEEEESTT
T ss_pred ccCCEEEeCCC
Confidence 456 4566554
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=151.84 Aligned_cols=179 Identities=15% Similarity=0.145 Sum_probs=120.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++++++|||||+|+||++++++|+++|++|+++.++..+........+.....++.++.+|+++.+++.++++
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 3568899999999999999999999999998875443322111122222224578999999999998887765
Q ss_pred CCcEEEecCCCCCCCCC----Cch---------------------------------------------------hhHHH
Q 025065 79 GCDGVFHTASPVIFLSD----NPQ---------------------------------------------------EWYSL 103 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~----~~~---------------------------------------------------~~Y~~ 103 (258)
++|+|||+||....... ... ..|+.
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a 183 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA 183 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence 68999999998643110 111 45999
Q ss_pred HHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|.+.+.+++.++.+. |+++++++||.|.++...... ..........+. ....+.+++|+|++++.++...
T Consensus 184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~----~~~~~~~~edvA~~i~~l~s~~ 257 (272)
T 4e3z_A 184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG--LPDRAREMAPSV----PMQRAGMPEEVADAILYLLSPS 257 (272)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CC----TTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC--ChHHHHHHhhcC----CcCCCcCHHHHHHHHHHHhCCc
Confidence 9999999999888764 899999999999987543210 111111111111 3345778999999999999754
Q ss_pred C--CCc-eEEEeC
Q 025065 181 K--ASG-RYLLAG 190 (258)
Q Consensus 181 ~--~~~-~~~~~~ 190 (258)
. ..| .+++++
T Consensus 258 ~~~~tG~~i~vdg 270 (272)
T 4e3z_A 258 ASYVTGSILNVSG 270 (272)
T ss_dssp GTTCCSCEEEEST
T ss_pred cccccCCEEeecC
Confidence 3 345 556554
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=151.95 Aligned_cols=184 Identities=17% Similarity=0.106 Sum_probs=130.1
Q ss_pred CCCCCCCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC
Q 025065 1 MMSGEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
||...+++|++|||||+ |+||++++++|+++|++|++++|+... .....++......+.++++|+++++++.++++
T Consensus 1 M~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (261)
T 2wyu_A 1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL--RPEAEKLAEALGGALLFRADVTQDEELDALFA 78 (261)
T ss_dssp CEEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGG--HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHH
T ss_pred CCccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHHHhcCCcEEEECCCCCHHHHHHHHH
Confidence 55556778999999999 999999999999999999999987631 11222221111237889999999998887765
Q ss_pred -------CCcEEEecCCCCCC----C---CCCch---------------------------------------------h
Q 025065 79 -------GCDGVFHTASPVIF----L---SDNPQ---------------------------------------------E 99 (258)
Q Consensus 79 -------~~d~Vih~a~~~~~----~---~~~~~---------------------------------------------~ 99 (258)
++|+|||+||.... . ..... .
T Consensus 79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 158 (261)
T 2wyu_A 79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYN 158 (261)
T ss_dssp HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCH
T ss_pred HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCch
Confidence 68999999997532 1 11111 5
Q ss_pred hHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 100 WYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.|+.+|...+.+++.++.+. |+++++++||.|+++..... .........+.... ....+.+++|+|++++.+
T Consensus 159 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~----p~~~~~~~~dva~~v~~l 233 (261)
T 2wyu_A 159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-PGFTKMYDRVAQTA----PLRRNITQEEVGNLGLFL 233 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC-TTHHHHHHHHHHHS----TTSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc-cccHHHHHHHHhcC----CCCCCCCHHHHHHHHHHH
Confidence 79999999999999988764 89999999999999854321 11122222222221 223477999999999999
Q ss_pred hcCCC--CCc-eEEEeCC
Q 025065 177 LEVPK--ASG-RYLLAGS 191 (258)
Q Consensus 177 ~~~~~--~~~-~~~~~~~ 191 (258)
+.... ..| .+++++.
T Consensus 234 ~s~~~~~~tG~~~~vdgG 251 (261)
T 2wyu_A 234 LSPLASGITGEVVYVDAG 251 (261)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred cChhhcCCCCCEEEECCC
Confidence 87532 345 5566543
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.5e-21 Score=153.42 Aligned_cols=178 Identities=16% Similarity=0.099 Sum_probs=116.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh--------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------- 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------- 77 (258)
+++|+||||||+|+||++++++|+++|++|++++|+...... ...++.....++.++.+|+++.+++.+++
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNE-CLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999987543211 11111111346889999999998888776
Q ss_pred CCCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 78 DGCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 78 ~~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
.++|+|||+||...... .... ..|+.+|..
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 170 (266)
T 1xq1_A 91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGA 170 (266)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHH
Confidence 56899999999753211 1111 579999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CC
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KA 182 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 182 (258)
.+.+++.++.+. |++++++|||.++++....... ..+........ ....+.+++|+|+++..++..+ ..
T Consensus 171 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~ 244 (266)
T 1xq1_A 171 LNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD--DEFKKVVISRK----PLGRFGEPEEVSSLVAFLCMPAASYI 244 (266)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------CCGGGGHHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC--HHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCccccCc
Confidence 999999988764 8999999999999986432110 00111111111 2235789999999999998753 23
Q ss_pred Cc-eEEEeC
Q 025065 183 SG-RYLLAG 190 (258)
Q Consensus 183 ~~-~~~~~~ 190 (258)
.| .+.+++
T Consensus 245 ~G~~~~v~g 253 (266)
T 1xq1_A 245 TGQTICVDG 253 (266)
T ss_dssp CSCEEECCC
T ss_pred cCcEEEEcC
Confidence 45 555544
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=9.9e-20 Score=150.80 Aligned_cols=193 Identities=19% Similarity=0.194 Sum_probs=127.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccc----cCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL----DGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|++|++|||||+|+||++++++|+++|++|++++|+........++.+ .....++.++.+|+++++++.++++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 356899999999999999999999999999999997544332222211 1113578999999999999888776
Q ss_pred ----CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHH
Q 025065 79 ----GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSL 103 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~ 103 (258)
++|+|||+||....... ... ..|+.
T Consensus 83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~a 162 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFA 162 (324)
T ss_dssp HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHH
Confidence 79999999997533211 111 56999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCC---CCccHHHHHHHHcCC-CCCC---------CCcceeeHH
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGD-QSFA---------FPYIFVEIR 167 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~g~-~~~~---------~~~~~i~v~ 167 (258)
||.+.|.+++.++.+ +|+++++++||.|.++..... ............... ...+ ...+..+++
T Consensus 163 sKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~ 242 (324)
T 3u9l_A 163 AKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVS 242 (324)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTH
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHH
Confidence 999999999998877 589999999999986643211 111111111111111 1011 112236899
Q ss_pred HHHHHHHHhhcCCCCCc--eEEEeCCCcCHHHH
Q 025065 168 DVVYAHIRALEVPKASG--RYLLAGSVAQHSDI 198 (258)
Q Consensus 168 D~a~~~~~~~~~~~~~~--~~~~~~~~~t~~e~ 198 (258)
|+|++++.+++.+.... .+++++...+...+
T Consensus 243 ~vA~aiv~~~~~~~~~~~~~~~~gp~~~~~~~~ 275 (324)
T 3u9l_A 243 LVADAIVRVVGTASGKRPFRVHVDPAEDGADVG 275 (324)
T ss_dssp HHHHHHHHHHTSCTTCCCSEEEECTTCCSHHHH
T ss_pred HHHHHHHHHhcCCCCCCCeEEEeCCcchHHHHH
Confidence 99999999999874322 45666555554333
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=149.52 Aligned_cols=184 Identities=18% Similarity=0.146 Sum_probs=125.0
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
..+++|++|||||+|+||++++++|+++|++|++++++..+........+...+.++.++++|+++++++.++++
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999986655443222223333334678999999999998888775
Q ss_pred --CCcEEEecCCCC-CCC---CCCch----------------------------------------------hhHHHHHH
Q 025065 79 --GCDGVFHTASPV-IFL---SDNPQ----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 --~~d~Vih~a~~~-~~~---~~~~~----------------------------------------------~~Y~~sK~ 106 (258)
++|++||+||.. ... ..... ..|+.+|.
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa 163 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKG 163 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHH
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHH
Confidence 689999999975 211 11111 57999999
Q ss_pred HHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--C
Q 025065 107 LAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--A 182 (258)
Q Consensus 107 ~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 182 (258)
..+.+.+.++.+. ++++..+.||.|.++....... ........... ....+.+++|+|++++.++.... .
T Consensus 164 a~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~----p~~r~~~pedva~~v~~L~s~~~~~i 237 (259)
T 3edm_A 164 AVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEVRERVAGAT----SLKREGSSEDVAGLVAFLASDDAAYV 237 (259)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------CCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCccccCc
Confidence 9999999988775 3999999999998774332110 00111111111 34457899999999999987543 3
Q ss_pred Cc-eEEEeCCCc
Q 025065 183 SG-RYLLAGSVA 193 (258)
Q Consensus 183 ~~-~~~~~~~~~ 193 (258)
.| .+.++|...
T Consensus 238 tG~~i~vdGg~~ 249 (259)
T 3edm_A 238 TGACYDINGGVL 249 (259)
T ss_dssp CSCEEEESBCSS
T ss_pred cCCEEEECCCcC
Confidence 56 566665544
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-20 Score=150.65 Aligned_cols=178 Identities=17% Similarity=0.105 Sum_probs=126.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..... .....+ ..++.++++|++|++++.++++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQ-AVVAGL---ENGGFAVEVDVTKRASVDAAMQKAIDALG 85 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTC---TTCCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHH---hcCCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999998753321 111111 1257889999999999888776
Q ss_pred CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||...... .... ..|+.+|..
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 165 (263)
T 3ak4_A 86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFA 165 (263)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHH
Confidence 7999999999753211 1110 579999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.+.+++.++.+ +|++++++|||.++++....... ........+.... ....+.+++|+|++++.+
T Consensus 166 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~dvA~~v~~l 241 (263)
T 3ak4_A 166 VFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT----PLGRIEEPEDVADVVVFL 241 (263)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC----TTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC----CCCCCcCHHHHHHHHHHH
Confidence 99999988876 38999999999999875321000 0011111222221 234589999999999999
Q ss_pred hcCC--CCCc-eEEEeCC
Q 025065 177 LEVP--KASG-RYLLAGS 191 (258)
Q Consensus 177 ~~~~--~~~~-~~~~~~~ 191 (258)
+..+ ...| .+++++.
T Consensus 242 ~s~~~~~~tG~~~~vdgG 259 (263)
T 3ak4_A 242 ASDAARFMTGQGINVTGG 259 (263)
T ss_dssp HSGGGTTCCSCEEEESSS
T ss_pred hCccccCCCCCEEEECcC
Confidence 9764 2356 5665543
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=150.91 Aligned_cols=185 Identities=16% Similarity=0.163 Sum_probs=130.2
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|...+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++++|++|++++.++++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLED-VAKQVTDTGRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 3444678999999999999999999999999999999987543221 112222224578999999999998887765
Q ss_pred ----CCcEEEecCCCCCC-CC---CCch----------------------------------------------hhHHHH
Q 025065 79 ----GCDGVFHTASPVIF-LS---DNPQ----------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~-~~---~~~~----------------------------------------------~~Y~~s 104 (258)
++|++||+||.... .. .... ..|+.+
T Consensus 84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 163 (264)
T 3ucx_A 84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMA 163 (264)
T ss_dssp HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHHHH
T ss_pred HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHHHH
Confidence 68999999987422 11 1111 679999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
|...+.+++.++.+ +|+++.+++||.|+++....... ...........+. ....+.+++|+|+++
T Consensus 164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v 239 (264)
T 3ucx_A 164 KSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS----DLKRLPTEDEVASAI 239 (264)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS----SSSSCCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC----CcccCCCHHHHHHHH
Confidence 99999999998876 68999999999998874321100 0111222222222 345688999999999
Q ss_pred HHhhcCC--CCCc-eEEEeCC
Q 025065 174 IRALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 174 ~~~~~~~--~~~~-~~~~~~~ 191 (258)
+.++... ...| .+.+++.
T Consensus 240 ~~L~s~~~~~itG~~i~vdGG 260 (264)
T 3ucx_A 240 LFMASDLASGITGQALDVNCG 260 (264)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHcCccccCCCCCEEEECCC
Confidence 9998753 3456 5556543
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=149.98 Aligned_cols=181 Identities=16% Similarity=0.092 Sum_probs=127.4
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.|++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++...+.++.++++|+++++++.++++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEE-AKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999987643321 122222334578999999999998887765
Q ss_pred -CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||....... ... ..|+.+|.
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 161 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKA 161 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHH
Confidence 68999999997533211 111 57999999
Q ss_pred HHHHHHHHHHHH----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-
Q 025065 107 LAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK- 181 (258)
Q Consensus 107 ~~e~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~- 181 (258)
..+.+.+.++.+ +|+++.+++||.|.++.................... ....+..++|+|++++.++....
T Consensus 162 a~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~~~ 237 (257)
T 3imf_A 162 GVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV----PLGRLGTPEEIAGLAYYLCSDEAA 237 (257)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS----TTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCchhc
Confidence 999998887754 489999999999998753321100000011111111 33458899999999999997643
Q ss_pred -CCc-eEEEeC
Q 025065 182 -ASG-RYLLAG 190 (258)
Q Consensus 182 -~~~-~~~~~~ 190 (258)
..| .+.++|
T Consensus 238 ~itG~~i~vdG 248 (257)
T 3imf_A 238 YINGTCMTMDG 248 (257)
T ss_dssp TCCSCEEEEST
T ss_pred CccCCEEEECC
Confidence 356 455554
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=153.19 Aligned_cols=185 Identities=17% Similarity=0.114 Sum_probs=129.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc--------cc----hhhccccCcCCcEEEEEccCCCcccH
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP--------KT----EHLRELDGATERLHLFKANLLEEGSF 73 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~ 73 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.. .. +....+.....++.++++|+++++++
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 5778999999999999999999999999999999853211 01 11122222346789999999999988
Q ss_pred HHHhC-------CCcEEEecCCCCCCCC---CCch---------------------------------------------
Q 025065 74 DSAVD-------GCDGVFHTASPVIFLS---DNPQ--------------------------------------------- 98 (258)
Q Consensus 74 ~~~~~-------~~d~Vih~a~~~~~~~---~~~~--------------------------------------------- 98 (258)
.++++ ++|++||+||...... ....
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 172 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT 172 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC
Confidence 88765 6899999999864321 1111
Q ss_pred ---hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHH---cCCCCCC-CCcceeeHHH
Q 025065 99 ---EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLI---NGDQSFA-FPYIFVEIRD 168 (258)
Q Consensus 99 ---~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~---~g~~~~~-~~~~~i~v~D 168 (258)
..|+.+|...+.+++.++.+ +|+++.+++||.|+++..... .....+.... ......+ ....+.+++|
T Consensus 173 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~d 250 (280)
T 3pgx_A 173 PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--AMMEIFARHPSFVHSFPPMPVQPNGFMTADE 250 (280)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHHHHHHCGGGGGGSCCBTTBCSSCBCHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--hhhhhhhcCchhhhhhhhcccCCCCCCCHHH
Confidence 67999999999999998876 689999999999998853321 0001111100 0001112 2224899999
Q ss_pred HHHHHHHhhcCCC--CCc-eEEEeCCC
Q 025065 169 VVYAHIRALEVPK--ASG-RYLLAGSV 192 (258)
Q Consensus 169 ~a~~~~~~~~~~~--~~~-~~~~~~~~ 192 (258)
+|++++.++.... ..| .+.+++..
T Consensus 251 vA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 251 VADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp HHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred HHHHHHHHhCccccCCCCCEEEECCCc
Confidence 9999999987543 456 55666543
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-20 Score=147.40 Aligned_cols=179 Identities=18% Similarity=0.104 Sum_probs=125.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++|++|||||+|+||++++++|+++|++|++++|+..........++.....++.++++|+++++++.++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4568999999999999999999999999999999843221111111221123468899999999998888775
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 161 (246)
T 2uvd_A 82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGV 161 (246)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHH
Confidence 6999999999753211 1111 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+.+.++.+ +|+++++++||.+.++........ ......... ....+.+++|+|++++.++..+. ..
T Consensus 162 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~----p~~~~~~~~dvA~~~~~l~s~~~~~~t 234 (246)
T 2uvd_A 162 IGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN---IKAEMLKLI----PAAQFGEAQDIANAVTFFASDQSKYIT 234 (246)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT---HHHHHHHTC----TTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH---HHHHHHhcC----CCCCCcCHHHHHHHHHHHcCchhcCCC
Confidence 9998888765 489999999999988753321111 111222221 23358899999999999987542 35
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.+++.
T Consensus 235 G~~~~vdgG 243 (246)
T 2uvd_A 235 GQTLNVDGG 243 (246)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECcC
Confidence 6 4555543
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.5e-20 Score=145.72 Aligned_cols=164 Identities=22% Similarity=0.204 Sum_probs=124.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------CCc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------GCD 81 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d 81 (258)
+|++|||||+|+||++++++|+++|++|++++|+.. . ..+.++++|+++++++.++++ ++|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d 68 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARAQEEAPLF 68 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHHHhhCCce
Confidence 578999999999999999999999999999999764 1 235789999999999998886 789
Q ss_pred EEEecCCCCCCCC----CCc----------------------------------------h----------------hhH
Q 025065 82 GVFHTASPVIFLS----DNP----------------------------------------Q----------------EWY 101 (258)
Q Consensus 82 ~Vih~a~~~~~~~----~~~----------------------------------------~----------------~~Y 101 (258)
+|||+|+...... ... . ..|
T Consensus 69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 148 (242)
T 1uay_A 69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 148 (242)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchh
Confidence 9999999743210 000 1 579
Q ss_pred HHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 102 SLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+.+|...+.+++.++.+ +|++++++|||.++++..... .......+..+.+. ...+.+++|+|++++.++.
T Consensus 149 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~dva~~~~~l~~ 222 (242)
T 1uay_A 149 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPF---PPRLGRPEEYAALVLHILE 222 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCS---SCSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---chhHHHHHHhhCCC---cccCCCHHHHHHHHHHHhc
Confidence 99999999999888766 389999999999999864322 12222232222211 1458899999999999998
Q ss_pred CCCCCc-eEEEeC
Q 025065 179 VPKASG-RYLLAG 190 (258)
Q Consensus 179 ~~~~~~-~~~~~~ 190 (258)
.+...| .+.+++
T Consensus 223 ~~~~~G~~~~v~g 235 (242)
T 1uay_A 223 NPMLNGEVVRLDG 235 (242)
T ss_dssp CTTCCSCEEEEST
T ss_pred CCCCCCcEEEEcC
Confidence 855566 555554
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=150.22 Aligned_cols=185 Identities=11% Similarity=0.047 Sum_probs=126.3
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc--CCcEEEEEccCCCcccHHHHhC-
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
|++.+++|++|||||+|+||++++++|+++|++|++++|+...... ...++... ..++.++.+|+++++++.++++
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (260)
T 2z1n_A 1 MDLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEA-AASRIASLVSGAQVDIVAGDIREPGDIDRLFEK 79 (260)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHH
Confidence 3444678999999999999999999999999999999987533211 11111100 1268899999999999888876
Q ss_pred -----CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHH
Q 025065 79 -----GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~ 103 (258)
++|+|||+||...... .... ..|+.
T Consensus 80 ~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 159 (260)
T 2z1n_A 80 ARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNI 159 (260)
T ss_dssp HHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred HHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHH
Confidence 5999999999753211 1111 57999
Q ss_pred HHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCC------ccH-HH-HHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 104 AKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILN------FGA-EV-ILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 104 sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~------~~~-~~-~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
+|...+.+.+.++.+. |++++++|||.++++....... ... .. ...+... . ....+.+++|+|++
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-p~~r~~~~~dva~~ 235 (260)
T 2z1n_A 160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASR---I-PMGRVGKPEELASV 235 (260)
T ss_dssp HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------C---C-TTSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhc---C-CCCCccCHHHHHHH
Confidence 9999999999887764 8999999999999886431100 000 00 0111111 1 23457899999999
Q ss_pred HHHhhcCC--CCCc-eEEEeCC
Q 025065 173 HIRALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 173 ~~~~~~~~--~~~~-~~~~~~~ 191 (258)
++.++..+ ...| .+.+++.
T Consensus 236 v~~l~s~~~~~~tG~~i~vdGG 257 (260)
T 2z1n_A 236 VAFLASEKASFITGAVIPVDGG 257 (260)
T ss_dssp HHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHhCccccCCCCCEEEeCCC
Confidence 99998753 3456 4455543
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=148.57 Aligned_cols=170 Identities=18% Similarity=0.107 Sum_probs=121.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..+.. ..+.. .++.++.+|+++++++.++++
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV-TELRQ-----AGAVALYGDFSCETGIMAFIDLLKTQTS 98 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH-HHHHH-----HTCEEEECCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHh-----cCCeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999999875431 11211 247889999999998887764
Q ss_pred CCcEEEecCCCCCCCCCCch-------------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNPQ-------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~~-------------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+||.......... ..|+.+|...+
T Consensus 99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 178 (260)
T 3gem_A 99 SLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLE 178 (260)
T ss_dssp CCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHH
Confidence 68999999998543221111 67999999999
Q ss_pred HHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-eE
Q 025065 110 EAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RY 186 (258)
Q Consensus 110 ~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~ 186 (258)
.+++.++.+. ++++.+++||.+.++..... .......... ....+..++|+|++++.+++.....| .+
T Consensus 179 ~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-----~~~~~~~~~~----p~~r~~~~edva~~v~~L~~~~~itG~~i 249 (260)
T 3gem_A 179 SLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-----AYRANALAKS----ALGIEPGAEVIYQSLRYLLDSTYVTGTTL 249 (260)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECTTCC--------------------C----CSCCCCCTHHHHHHHHHHHHCSSCCSCEE
T ss_pred HHHHHHHHHHCCCCEEEEEeecccccCCCCCH-----HHHHHHHhcC----CCCCCCCHHHHHHHHHHHhhCCCCCCCEE
Confidence 9999988775 59999999999987643211 0111111111 22346679999999999997766677 55
Q ss_pred EEeC
Q 025065 187 LLAG 190 (258)
Q Consensus 187 ~~~~ 190 (258)
.+++
T Consensus 250 ~vdG 253 (260)
T 3gem_A 250 TVNG 253 (260)
T ss_dssp EEST
T ss_pred EECC
Confidence 5554
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=8.3e-20 Score=148.53 Aligned_cols=183 Identities=16% Similarity=0.110 Sum_probs=128.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCcc-------c----hhhccccCcCCcEEEEEccCCCcccHH
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-------T----EHLRELDGATERLHLFKANLLEEGSFD 74 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 74 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..... . .....+.....++.++++|+++++++.
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 87 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE 87 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 56799999999999999999999999999999999753210 0 111112222457899999999999888
Q ss_pred HHhC-------CCcEEEecCCCCCCCC---CCch----------------------------------------------
Q 025065 75 SAVD-------GCDGVFHTASPVIFLS---DNPQ---------------------------------------------- 98 (258)
Q Consensus 75 ~~~~-------~~d~Vih~a~~~~~~~---~~~~---------------------------------------------- 98 (258)
++++ ++|++||+||...... ....
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 167 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFA 167 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTT
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCC
Confidence 8775 6999999999864321 1111
Q ss_pred -hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC----------CccHHHHHHHHcCCCCCCCCccee
Q 025065 99 -EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL----------NFGAEVILNLINGDQSFAFPYIFV 164 (258)
Q Consensus 99 -~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~----------~~~~~~~~~~~~g~~~~~~~~~~i 164 (258)
..|+.+|...+.+.+.++.+ +|+++.+++||.|+++...... ................ ....+.
T Consensus 168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 245 (281)
T 3s55_A 168 QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHL--QYAPFL 245 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCS--SSCSCB
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhc--cCcCCC
Confidence 67999999999999999886 4899999999999998643210 0000000110000000 236789
Q ss_pred eHHHHHHHHHHhhcCCC--CCc-eEEEeC
Q 025065 165 EIRDVVYAHIRALEVPK--ASG-RYLLAG 190 (258)
Q Consensus 165 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 190 (258)
+++|+|++++.++..+. ..| .+.+++
T Consensus 246 ~p~dvA~~v~~L~s~~~~~itG~~i~vdg 274 (281)
T 3s55_A 246 KPEEVTRAVLFLVDEASSHITGTVLPIDA 274 (281)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence 99999999999998643 346 555554
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.8e-20 Score=148.22 Aligned_cols=166 Identities=15% Similarity=0.163 Sum_probs=122.2
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+.+.. +... ..++.++++|++|.+++.++++
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-----~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-----KALN--LPNTLCAQVDVTDKYTFDTAITRAEKIY 85 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH-----HTTC--CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHhh--cCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence 34578999999999999999999999999999999875332 1111 2368899999999998887775
Q ss_pred -CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||...... .... ..|+.+|..
T Consensus 86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a 165 (266)
T 3p19_A 86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFA 165 (266)
T ss_dssp CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHH
Confidence 6899999999864321 1111 679999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
.+.+.+.++.+ +|+++.+++||.|.++........ ........... ....+++++|+|++++.++.++..
T Consensus 166 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~---~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 166 VHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQ--QIKDGYDAWRV---DMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCH--HHHHHHHHHHH---HTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccch--hhhHHHHhhcc---cccCCCCHHHHHHHHHHHHcCCCC
Confidence 99999988876 589999999999998754432111 11111100000 223478999999999999998764
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-20 Score=151.53 Aligned_cols=179 Identities=20% Similarity=0.156 Sum_probs=126.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+||||||+|+||++++++|+++|++|++++|+..+........+...+.++.++++|+++.+++.++++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 106 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG 106 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4678999999999999999999999999999999965433221112222224578999999999998887765
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||....... ... ..|+.+|...
T Consensus 107 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 186 (271)
T 4iin_A 107 GLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGM 186 (271)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHH
Confidence 68999999998643211 111 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++.+ .++++..++||.+.++....... ......... . ....+.+++|+|+++..++..+. ..
T Consensus 187 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~---~-~~~~~~~p~dvA~~i~~l~s~~~~~it 259 (271)
T 4iin_A 187 IAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD---ELKADYVKN---I-PLNRLGSAKEVAEAVAFLLSDHSSYIT 259 (271)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------CGGG---C-TTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH---HHHHHHHhc---C-CcCCCcCHHHHHHHHHHHhCCCcCCCc
Confidence 9999988876 58999999999998764322110 001111111 1 34568899999999999997643 45
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.++|.
T Consensus 260 G~~i~vdGG 268 (271)
T 4iin_A 260 GETLKVNGG 268 (271)
T ss_dssp SCEEEESTT
T ss_pred CCEEEeCCC
Confidence 6 4555543
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=148.98 Aligned_cols=177 Identities=19% Similarity=0.150 Sum_probs=124.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEE-EcCCCCccchhhccccCcCCcEEE-EEccCCCcccHHHHhC-------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHL-FKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~------- 78 (258)
||+||||||+|+||++++++|+++|++|+++ +|+.+.... ....+.....++.. +.+|+++.+++.++++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEE-VAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG 79 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHH-HHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999998 665432211 11111111234566 8999999998887754
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 159 (245)
T 2ph3_A 80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL 159 (245)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence 7999999999753211 1111 5799999999
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++.+. |++++++||+.++++..... ..........+. ....+++++|+|+++..++..+. ..
T Consensus 160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~ 232 (245)
T 2ph3_A 160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---PQEVKEAYLKQI----PAGRFGRPEEVAEAVAFLVSEKAGYIT 232 (245)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHTC----TTCSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc---CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccccc
Confidence 99999888764 89999999999998754321 112222222222 23468899999999999987642 34
Q ss_pred c-eEEEeCCC
Q 025065 184 G-RYLLAGSV 192 (258)
Q Consensus 184 ~-~~~~~~~~ 192 (258)
| .|++++..
T Consensus 233 G~~~~v~gg~ 242 (245)
T 2ph3_A 233 GQTLCVDGGL 242 (245)
T ss_dssp SCEEEESTTC
T ss_pred CCEEEECCCC
Confidence 5 56666543
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-19 Score=148.23 Aligned_cols=178 Identities=18% Similarity=0.156 Sum_probs=129.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcC-CcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ...++.... .++.++++|++|++++.++++
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSS-VTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH-HHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999998654322 122222222 578999999999988877654
Q ss_pred -CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||....... ... ..|+.+|.
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKa 197 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKA 197 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHH
Confidence 68999999998643221 111 57999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
..+.+++.++.+ +|+++.+++||.|+++..... ............ ....+..++|+|+++..++... .
T Consensus 198 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~----p~~r~~~p~dvA~~v~fL~s~~a~~ 270 (293)
T 3rih_A 198 AQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM---GEEYISGMARSI----PMGMLGSPVDIGHLAAFLATDEAGY 270 (293)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT---CHHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc---cHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCccccC
Confidence 999999998876 589999999999998753321 122333333332 2334678999999999998654 3
Q ss_pred CCc-eEEEeCC
Q 025065 182 ASG-RYLLAGS 191 (258)
Q Consensus 182 ~~~-~~~~~~~ 191 (258)
..| .+.++|.
T Consensus 271 itG~~i~vdGG 281 (293)
T 3rih_A 271 ITGQAIVVDGG 281 (293)
T ss_dssp CCSCEEEESTT
T ss_pred CCCCEEEECCC
Confidence 456 5555543
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-20 Score=148.06 Aligned_cols=176 Identities=17% Similarity=0.151 Sum_probs=123.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEE-EcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
+|+||||||+|+||++++++|+++|++|+++ +|+..... ....++.....++.++++|+++++++.++++ +
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE-EVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999985 56532221 1111111113468899999999999888775 6
Q ss_pred CcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||...... .... ..|+.+|...+
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 159 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI 159 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence 899999999854321 1111 57999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC---CC
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK---AS 183 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~ 183 (258)
.+++.++.+ .|++++++|||.++++..... ............ ....+++++|+|+++..++..+. ..
T Consensus 160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~~~~~ 232 (244)
T 1edo_A 160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTI----PLGRTGQPENVAGLVEFLALSPAASYIT 232 (244)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSC----TTCSCBCHHHHHHHHHHHHHCSGGGGCC
T ss_pred HHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---ChHHHHHHhhcC----CCCCCCCHHHHHHHHHHHhCCCccCCcC
Confidence 999888766 489999999999998753321 112222222221 23458899999999999985432 34
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.+++.
T Consensus 233 G~~~~v~gG 241 (244)
T 1edo_A 233 GQAFTIDGG 241 (244)
T ss_dssp SCEEEESTT
T ss_pred CCEEEeCCC
Confidence 5 5555543
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=7.8e-20 Score=145.89 Aligned_cols=177 Identities=18% Similarity=0.078 Sum_probs=129.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ....+...+.++.++.+|+++++++.++++
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEK-FENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999997643321 111222224578999999999998887764
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||....... ... ..|+.+|...
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 161 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGV 161 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHH
Confidence 47999999998643211 111 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++.+ .|+++.+++||.+.++..... ..........+. ....+.+++|+|+++..++.... ..
T Consensus 162 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~dva~~i~~l~s~~~~~~t 234 (247)
T 3lyl_A 162 IGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL---TDEQKSFIATKI----PSGQIGEPKDIAAAVAFLASEEAKYIT 234 (247)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS---CHHHHHHHHTTS----TTCCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc---cHHHHHHHhhcC----CCCCCcCHHHHHHHHHHHhCCCcCCcc
Confidence 9999988876 489999999999988754432 111222222222 34568899999999999987543 35
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| .+++++
T Consensus 235 G~~i~vdg 242 (247)
T 3lyl_A 235 GQTLHVNG 242 (247)
T ss_dssp SCEEEEST
T ss_pred CCEEEECC
Confidence 6 555554
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=150.63 Aligned_cols=179 Identities=17% Similarity=0.096 Sum_probs=126.2
Q ss_pred CCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+ |+||++++++|+++|++|++++|+. .. .+...++........++++|+++++++.++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL-KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TT-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HH-HHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence 567899999999 9999999999999999999999976 21 11222221111234788999999998888765
Q ss_pred --CCcEEEecCCCCCC----CC----CCch---------------------------------------------hhHHH
Q 025065 79 --GCDGVFHTASPVIF----LS----DNPQ---------------------------------------------EWYSL 103 (258)
Q Consensus 79 --~~d~Vih~a~~~~~----~~----~~~~---------------------------------------------~~Y~~ 103 (258)
++|+|||+||.... .. .... ..|+.
T Consensus 85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 164 (265)
T 1qsg_A 85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGL 164 (265)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHH
T ss_pred cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHH
Confidence 58999999997542 10 1111 57999
Q ss_pred HHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+++.++.+. |+++++++||.|+++..... .........+..+. ....+.+++|+|++++.++..+
T Consensus 165 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~----p~~~~~~~~dva~~v~~l~s~~ 239 (265)
T 1qsg_A 165 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVT----PIRRTVTIEDVGNSAAFLCSDL 239 (265)
T ss_dssp HHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cccHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCch
Confidence 9999999999988774 89999999999999864321 11122222222221 2234789999999999998753
Q ss_pred C--CCc-eEEEeCC
Q 025065 181 K--ASG-RYLLAGS 191 (258)
Q Consensus 181 ~--~~~-~~~~~~~ 191 (258)
. ..| .+.+++.
T Consensus 240 ~~~~tG~~~~vdgG 253 (265)
T 1qsg_A 240 SAGISGEVVHVDGG 253 (265)
T ss_dssp GTTCCSCEEEESTT
T ss_pred hcCccCCEEEECCC
Confidence 2 345 5555543
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-20 Score=148.88 Aligned_cols=181 Identities=14% Similarity=0.123 Sum_probs=121.5
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-----
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV----- 77 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----- 77 (258)
...+++|++|||||+|+||++++++|+++|++|++++|+..+.....+.. ...++.++++|+++++++.+++
T Consensus 2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (249)
T 2ew8_A 2 TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN---LGRRVLTVKCDVSQPGDVEAFGKQVIS 78 (249)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHh---cCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 34467899999999999999999999999999999999762211111111 1346889999999999888775
Q ss_pred --CCCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHH
Q 025065 78 --DGCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAK 105 (258)
Q Consensus 78 --~~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK 105 (258)
.++|+|||+||...... .... ..|+.+|
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 158 (249)
T 2ew8_A 79 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTK 158 (249)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHH
Confidence 37999999999754321 1111 5799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
...+.+++.++.+ +|+++++++||.+.++......... ......... . ....+.+++|+|++++.++..+
T Consensus 159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~-~-~~~~~~~p~dva~~~~~l~s~~~~ 233 (249)
T 2ew8_A 159 AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA---MFDVLPNML-Q-AIPRLQVPLDLTGAAAFLASDDAS 233 (249)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTT-S-SSCSCCCTHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc---hhhHHHHhh-C-ccCCCCCHHHHHHHHHHHcCcccC
Confidence 9999999998876 4899999999999987532110000 000000000 1 2335789999999999998753
Q ss_pred CCCc-eEEEeCC
Q 025065 181 KASG-RYLLAGS 191 (258)
Q Consensus 181 ~~~~-~~~~~~~ 191 (258)
...| .+.+++.
T Consensus 234 ~~tG~~~~vdGG 245 (249)
T 2ew8_A 234 FITGQTLAVDGG 245 (249)
T ss_dssp TCCSCEEEESSS
T ss_pred CCCCcEEEECCC
Confidence 2456 4555543
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-20 Score=150.69 Aligned_cols=180 Identities=12% Similarity=0.095 Sum_probs=129.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.................++.++++|++|++++.++++
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999876432221122222234578999999999998887765
Q ss_pred CCcEEEecCCCCCCCC----CCch---------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS----DNPQ---------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~----~~~~---------------------------------------------~~Y~~sK~~~e 109 (258)
++|++||+||...... .... ..|+.+|...+
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 204 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIV 204 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHHH
Confidence 6899999999753211 1111 67999999999
Q ss_pred HHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc
Q 025065 110 EAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG 184 (258)
Q Consensus 110 ~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 184 (258)
.+++.++.+. |+++..++||.|+++...... .......+..+. ....+.+++|+|++++.++... ...|
T Consensus 205 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~----p~~r~~~p~dvA~~v~~L~s~~~~~itG 278 (291)
T 3ijr_A 205 AFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF--DEKKVSQFGSNV----PMQRPGQPYELAPAYVYLASSDSSYVTG 278 (291)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS--CHHHHHHTTTTS----TTSSCBCGGGTHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC--CHHHHHHHHccC----CCCCCcCHHHHHHHHHHHhCCccCCCcC
Confidence 9999988764 899999999999987532111 111122211111 3456889999999999998754 2456
Q ss_pred -eEEEeCC
Q 025065 185 -RYLLAGS 191 (258)
Q Consensus 185 -~~~~~~~ 191 (258)
.+.++|.
T Consensus 279 ~~i~vdGG 286 (291)
T 3ijr_A 279 QMIHVNGG 286 (291)
T ss_dssp CEEEESSS
T ss_pred CEEEECCC
Confidence 4555543
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=3e-20 Score=149.73 Aligned_cols=178 Identities=14% Similarity=0.164 Sum_probs=127.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc-CcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|+||||||+|+||++++++|+++|++|++++|+..+... ...++. ....++.++++|+++++++.++++
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVE-VTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHH-HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHH-HHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 567899999999999999999999999999999997654321 111111 013468999999999998887764
Q ss_pred -CCcEEEecCCCCCCCC---CCch-------------------------------------------------------h
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ-------------------------------------------------------E 99 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~-------------------------------------------------------~ 99 (258)
++|+|||+||...... .... .
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~ 170 (265)
T 1h5q_A 91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV 170 (265)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccccccc
Confidence 4899999999753211 1100 2
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 100 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.|+.+|...|.+++.++.+ +|++++++|||.++++..... ............ ....+.+++|+|++++.+
T Consensus 171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l 243 (265)
T 1h5q_A 171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNI----PLNRFAQPEEMTGQAILL 243 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTC----TTSSCBCGGGGHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---chhHHHHHHhcC----cccCCCCHHHHHHHHHhh
Confidence 5999999999999988876 489999999999998864322 111222222221 234588999999999999
Q ss_pred hcCCC--CCc-eEEEeCC
Q 025065 177 LEVPK--ASG-RYLLAGS 191 (258)
Q Consensus 177 ~~~~~--~~~-~~~~~~~ 191 (258)
+..+. ..| .+.+++.
T Consensus 244 ~~~~~~~~~G~~~~v~gG 261 (265)
T 1h5q_A 244 LSDHATYMTGGEYFIDGG 261 (265)
T ss_dssp HSGGGTTCCSCEEEECTT
T ss_pred ccCchhcCcCcEEEecCC
Confidence 87642 345 5655543
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.5e-20 Score=149.81 Aligned_cols=182 Identities=18% Similarity=0.081 Sum_probs=129.4
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|...+++|++|||||+|+||++++++|+++|++|++++|+...... ....+.....++.++.+|++|.+++.++++
T Consensus 22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEG-IGAAFKQAGLEGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 3344678999999999999999999999999999999987543221 111111123467899999999998887765
Q ss_pred ----CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHH
Q 025065 79 ----GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~s 104 (258)
++|+|||+||...... .... ..|+.+
T Consensus 101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 180 (270)
T 3ftp_A 101 KEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAA 180 (270)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHH
Confidence 6899999999854321 1111 679999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
|...+.+++.++.+ .|+++.+++||.|.++..... ............ ....+.+++|+|++++.++...
T Consensus 181 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~~ 253 (270)
T 3ftp_A 181 KAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL---PQEQQTALKTQI----PLGRLGSPEDIAHAVAFLASPQA 253 (270)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS---CHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc---CHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCCCc
Confidence 99999999988876 489999999999987643211 111222222222 3445889999999999998643
Q ss_pred -CCCc-eEEEeCC
Q 025065 181 -KASG-RYLLAGS 191 (258)
Q Consensus 181 -~~~~-~~~~~~~ 191 (258)
...| .+++++.
T Consensus 254 ~~itG~~i~vdGG 266 (270)
T 3ftp_A 254 GYITGTTLHVNGG 266 (270)
T ss_dssp TTCCSCEEEESTT
T ss_pred CCccCcEEEECCC
Confidence 3456 5566543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-20 Score=147.67 Aligned_cols=179 Identities=17% Similarity=0.163 Sum_probs=127.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEE-EcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++|++|||||+|+||++++++|+++|++|++. +|+.... .....++.....++.++++|+++++++.++++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAA-LETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999999999987 5544222 12222222234578999999999998887764
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 161 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAAL 161 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence 5799999999743221 1111 6799999999
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++.+. |+++..++||.+.++...... ............. ....+.+++|+|++++.++.... ..
T Consensus 162 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----p~~r~~~~~dva~~v~~L~s~~~~~it 236 (258)
T 3oid_A 162 EALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP-NREDLLEDARQNT----PAGRMVEIKDMVDTVEFLVSSKADMIR 236 (258)
T ss_dssp HHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT-THHHHHHHHHHHC----TTSSCBCHHHHHHHHHHHTSSTTTTCC
T ss_pred HHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc-cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCcccCCcc
Confidence 99999998774 899999999999887543321 1112222222222 34468899999999999998643 45
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.++|.
T Consensus 237 G~~i~vdGG 245 (258)
T 3oid_A 237 GQTIIVDGG 245 (258)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 6 5566543
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-20 Score=150.67 Aligned_cols=182 Identities=14% Similarity=0.110 Sum_probs=128.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc-CcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++. ....++.++++|+++++++.++++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLT-AARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHH-HHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999987643221 111111 113578999999999988887765
Q ss_pred --CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||....... ... ..|+.+|.
T Consensus 103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 182 (277)
T 4fc7_A 103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKA 182 (277)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHH
T ss_pred cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHH
Confidence 68999999997533211 111 67999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
..+.+++.++.+. |+++..++||.|.++.................... ....+..++|+|++++.++... .
T Consensus 183 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v~fL~s~~~~~ 258 (277)
T 4fc7_A 183 AVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTAS----PLQRLGNKTEIAHSVLYLASPLASY 258 (277)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTS----TTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccC----CCCCCcCHHHHHHHHHHHcCCccCC
Confidence 9999999988764 89999999999998632111111112222322222 3345789999999999999753 3
Q ss_pred CCc-eEEEeCC
Q 025065 182 ASG-RYLLAGS 191 (258)
Q Consensus 182 ~~~-~~~~~~~ 191 (258)
..| .+.++|.
T Consensus 259 itG~~i~vdGG 269 (277)
T 4fc7_A 259 VTGAVLVADGG 269 (277)
T ss_dssp CCSCEEEESTT
T ss_pred cCCCEEEECCC
Confidence 456 4555543
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=149.52 Aligned_cols=179 Identities=16% Similarity=0.107 Sum_probs=128.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------G 79 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~ 79 (258)
+++|++|||||+|+||++++++|+++|++|++++|.... .+...++.....++.++++|++|.+++.++.+ +
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV--KEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHH--HHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH--HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence 567899999999999999999999999999999965321 12222222334578999999999988876643 6
Q ss_pred CcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||....... ... ..|+.+|...+
T Consensus 107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~ 186 (273)
T 3uf0_A 107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVV 186 (273)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHH
Confidence 9999999998643221 111 67999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 184 (258)
.+++.++.+ +|+++.+++||.|+++....... .......+.... ....+..++|+|++++.++... ...|
T Consensus 187 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~----p~~r~~~pedva~~v~~L~s~~a~~itG 261 (273)
T 3uf0_A 187 GLTRALASEWAGRGVGVNALAPGYVVTANTAALRA-DDERAAEITARI----PAGRWATPEDMVGPAVFLASDAASYVHG 261 (273)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-SHHHHHHHHHHS----TTSSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhccc-CHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence 999999877 68999999999999875322100 111222222221 3445889999999999999763 3456
Q ss_pred -eEEEeCC
Q 025065 185 -RYLLAGS 191 (258)
Q Consensus 185 -~~~~~~~ 191 (258)
.+.++|.
T Consensus 262 ~~i~vdGG 269 (273)
T 3uf0_A 262 QVLAVDGG 269 (273)
T ss_dssp CEEEESTT
T ss_pred CEEEECcC
Confidence 5555543
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.5e-20 Score=147.59 Aligned_cols=175 Identities=15% Similarity=0.060 Sum_probs=123.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+. ......+ .. .++++|+++++++.++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~----~~-~~~~~D~~~~~~~~~~~~~~~~~~g 76 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG--KEVAEAI----GG-AFFQVDLEDERERVRFVEEAAYALG 76 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH--HHHHHHH----TC-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHh----hC-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999998654 2212222 13 788999999988887664
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 77 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 156 (256)
T 2d1y_A 77 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGL 156 (256)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHH
Confidence 6899999999754311 1111 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC---CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
+.+++.++.+ .|+++++++||.+.++...... .........+.... ....+.+++|+|++++.++..+
T Consensus 157 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dvA~~~~~l~s~~~~ 232 (256)
T 2d1y_A 157 VNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH----ALRRLGKPEEVAEAVLFLASEKAS 232 (256)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhc
Confidence 9999988876 4899999999999876321100 00000001111111 3456899999999999998764
Q ss_pred CCCc-eEEEeCC
Q 025065 181 KASG-RYLLAGS 191 (258)
Q Consensus 181 ~~~~-~~~~~~~ 191 (258)
...| .+.+++.
T Consensus 233 ~~~G~~~~v~gG 244 (256)
T 2d1y_A 233 FITGAILPVDGG 244 (256)
T ss_dssp TCCSCEEEESTT
T ss_pred CCCCCEEEECCC
Confidence 2356 5655543
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-21 Score=153.09 Aligned_cols=179 Identities=19% Similarity=0.195 Sum_probs=110.3
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|++|++++.++++
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEA-VAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3468999999999999999999999999999999987543321 112222224578899999999998888775
Q ss_pred -CCcEEEecCCCCCC------CCCCch--------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIF------LSDNPQ--------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~------~~~~~~--------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||.... ...... ..|+.+|..
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~Y~asK~a 164 (253)
T 3qiv_A 85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNYYGLAKVG 164 (253)
T ss_dssp SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CCHHH
T ss_pred CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCCchhHHHHHH
Confidence 79999999998421 111111 579999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--C
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--A 182 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 182 (258)
.+.+++.++.+. |+++.+++||.++++....... ......+..+. ....+..++|+|++++.++.... .
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~~~~~~ 238 (253)
T 3qiv_A 165 INGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP--KEMVDDIVKGL----PLSRMGTPDDLVGMCLFLLSDEASWI 238 (253)
T ss_dssp HHHHHHHHHHHTTTTTEEEEEEEC-------------------------------------CCHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc--HHHHHHHhccC----CCCCCCCHHHHHHHHHHHcCccccCC
Confidence 999999998875 7999999999999885432211 11112222221 33456789999999999997543 3
Q ss_pred Cc-eEEEeC
Q 025065 183 SG-RYLLAG 190 (258)
Q Consensus 183 ~~-~~~~~~ 190 (258)
.| .|++++
T Consensus 239 tG~~~~vdg 247 (253)
T 3qiv_A 239 TGQIFNVDG 247 (253)
T ss_dssp CSCEEEC--
T ss_pred CCCEEEECC
Confidence 45 555443
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.84 E-value=6.5e-20 Score=148.29 Aligned_cols=184 Identities=18% Similarity=0.139 Sum_probs=129.3
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
...+++|++|||||+|+||++++++|+++|++|++++++..+.......++...+.++.++++|+++++++.++++
T Consensus 13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3346789999999999999999999999999999988765432222222222224678999999999998887765
Q ss_pred ---CCcEEEecCCCCCCCCC---Cch----------------------------------------------hhHHHHHH
Q 025065 79 ---GCDGVFHTASPVIFLSD---NPQ----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~~---~~~----------------------------------------------~~Y~~sK~ 106 (258)
++|++||+||....... ... ..|+.+|.
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa 172 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKG 172 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHH
Confidence 68999999998643221 111 57999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCC--------CCccHHHHHH-HHcCCCCCCCCcceeeHHHHHHHHH
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI--------LNFGAEVILN-LINGDQSFAFPYIFVEIRDVVYAHI 174 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~-~~~g~~~~~~~~~~i~v~D~a~~~~ 174 (258)
..+.+++.++.+ +|+++..++||.|.++..... .......... ..... ....+.+++|+|++++
T Consensus 173 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v~ 248 (270)
T 3is3_A 173 AVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS----PLHRNGWPQDVANVVG 248 (270)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS----TTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC----CCCCCCCHHHHHHHHH
Confidence 999999998877 489999999999988743210 0001111111 11111 3345789999999999
Q ss_pred HhhcCC--CCCc-eEEEeC
Q 025065 175 RALEVP--KASG-RYLLAG 190 (258)
Q Consensus 175 ~~~~~~--~~~~-~~~~~~ 190 (258)
.++... ...| .+.++|
T Consensus 249 ~L~s~~~~~itG~~i~vdG 267 (270)
T 3is3_A 249 FLVSKEGEWVNGKVLTLDG 267 (270)
T ss_dssp HHTSGGGTTCCSCEEEEST
T ss_pred HHcCCccCCccCcEEEeCC
Confidence 999654 2456 445554
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-19 Score=143.20 Aligned_cols=173 Identities=10% Similarity=0.034 Sum_probs=115.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..... .++.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~~~~~~g 73 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ-----------YPFATEVMDVADAAQVAQVCQRLLAETE 73 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC-----------CSSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc-----------CCceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999764210 126888999999999888775
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 153 (250)
T 2fwm_X 74 RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAAL 153 (250)
T ss_dssp CCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHH
Confidence 6899999999854321 1111 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHH-HHHc---CC-CCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVIL-NLIN---GD-QSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~---g~-~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+.+++.++.+ +|++++++|||.++++........ ..... .+.. .. ... ....+.+++|+|++++.++..+
T Consensus 154 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-p~~~~~~p~dvA~~v~~l~s~~ 231 (250)
T 2fwm_X 154 KSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS-DDAEEQRIRGFGEQFKLGI-PLGKIARPQEIANTILFLASDL 231 (250)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHhCccCCEEEEEECCcccCccccccccC-hhHHHHHHhhhhhcccccC-CCCCCcCHHHHHHHHHHHhCcc
Confidence 9999998876 489999999999998853321000 00001 1100 00 001 2234789999999999999764
Q ss_pred --CCCc-eEEEeCC
Q 025065 181 --KASG-RYLLAGS 191 (258)
Q Consensus 181 --~~~~-~~~~~~~ 191 (258)
...| .+.+++.
T Consensus 232 ~~~~tG~~i~vdGG 245 (250)
T 2fwm_X 232 ASHITLQDIVVDGG 245 (250)
T ss_dssp GTTCCSCEEEESTT
T ss_pred ccCCCCCEEEECCC
Confidence 2456 4555543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.4e-20 Score=147.54 Aligned_cols=181 Identities=15% Similarity=0.101 Sum_probs=127.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh--------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------- 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------- 77 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|+++++++.+++
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELND-CLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999987543211 11111111346889999999999888776
Q ss_pred CCCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 78 DGCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 78 ~~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
.++|+|||+||...... .... ..|+.+|..
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 165 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGA 165 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHH
Confidence 46999999999753211 1111 579999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCc--cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNF--GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
.+.+++.++.+. |+++++++||.+.++........ ....+..+.... ....+.+++|+|++++.++..+
T Consensus 166 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dvA~~v~~l~s~~~~ 241 (260)
T 2ae2_A 166 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC----ALRRMGEPKELAAMVAFLCFPAAS 241 (260)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS----TTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCcccc
Confidence 999999988774 89999999999988642211000 011111222221 2345889999999999998754
Q ss_pred CCCc-eEEEeCC
Q 025065 181 KASG-RYLLAGS 191 (258)
Q Consensus 181 ~~~~-~~~~~~~ 191 (258)
...| .+.+++.
T Consensus 242 ~~tG~~~~vdgG 253 (260)
T 2ae2_A 242 YVTGQIIYVDGG 253 (260)
T ss_dssp TCCSCEEEESTT
T ss_pred CCCCCEEEECCC
Confidence 2356 5555543
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.9e-20 Score=146.99 Aligned_cols=171 Identities=14% Similarity=0.093 Sum_probs=124.3
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+... ..++.++++|+++++++.++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3567899999999999999999999999999999997644 1357889999999998887765
Q ss_pred -CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||...... .... ..|+.+|..
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 152 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHA 152 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHH
Confidence 6999999999754321 1111 679999999
Q ss_pred HHHHHHHHHHHcC--CcEEEEcCCccccCCcCCCCC----ccH----HHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 108 AEEAAWKFAKENG--IDLVAIHPGTVIGPFFQPILN----FGA----EVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 108 ~e~~~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~~----~~~----~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
.+.+++.++.+.+ +++++++||.+.++....... ... .....+.... ....+++++|+|++++.++
T Consensus 153 ~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~p~dvA~~v~~l~ 228 (264)
T 2dtx_A 153 VIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEH----PMQRIGKPQEVASAVAFLA 228 (264)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHh
Confidence 9999999887754 999999999998763211000 000 1111111111 2345899999999999998
Q ss_pred cCC--CCCc-eEEEeCC
Q 025065 178 EVP--KASG-RYLLAGS 191 (258)
Q Consensus 178 ~~~--~~~~-~~~~~~~ 191 (258)
..+ ...| .+.+++.
T Consensus 229 s~~~~~~tG~~i~vdGG 245 (264)
T 2dtx_A 229 SREASFITGTCLYVDGG 245 (264)
T ss_dssp SGGGTTCCSCEEEESTT
T ss_pred CchhcCCCCcEEEECCC
Confidence 754 2356 4555543
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.6e-20 Score=146.97 Aligned_cols=177 Identities=15% Similarity=0.187 Sum_probs=125.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ....+.. ..++.++.+|+++++++.++++
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEK-AAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhhc-cCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 567899999999999999999999999999999987533211 1111111 1468999999999998887765
Q ss_pred CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||...... .... ..|+.+|..
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 161 (251)
T 1zk4_A 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGA 161 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHH
Confidence 4899999999753211 1100 579999999
Q ss_pred HHHHHHHHHH-----HcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-
Q 025065 108 AEEAAWKFAK-----ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK- 181 (258)
Q Consensus 108 ~e~~~~~~~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~- 181 (258)
.|.+++.++. ..+++++++|||.++++..... .. . ......... . ....+++++|+|++++.++..+.
T Consensus 162 ~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~-~-~~~~~~~~~--~-~~~~~~~~~dva~~~~~l~~~~~~ 235 (251)
T 1zk4_A 162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PG-A-EEAMSQRTK--T-PMGHIGEPNDIAYICVYLASNESK 235 (251)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TT-H-HHHHTSTTT--C-TTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cc-h-hhhHHHhhc--C-CCCCCcCHHHHHHHHHHHcCcccc
Confidence 9999888765 4589999999999998854321 11 1 111111111 1 23458999999999999997642
Q ss_pred -CCc-eEEEeC
Q 025065 182 -ASG-RYLLAG 190 (258)
Q Consensus 182 -~~~-~~~~~~ 190 (258)
..| .+.+++
T Consensus 236 ~~~G~~~~v~g 246 (251)
T 1zk4_A 236 FATGSEFVVDG 246 (251)
T ss_dssp TCCSCEEEEST
T ss_pred cccCcEEEECC
Confidence 345 555554
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-20 Score=144.93 Aligned_cols=151 Identities=19% Similarity=0.163 Sum_probs=114.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CCcEEEe
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDGVFH 85 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~Vih 85 (258)
|++|||||+|+||++++++|+++ +|++++|++..... ....+ .. .++.+|++|++++.++++ ++|+|||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~-~~~~~----~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~ 72 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAE-LAREV----GA-RALPADLADELEAKALLEEAGPLDLLVH 72 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHH-HHHHH----TC-EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHH-HHHhc----cC-cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence 57999999999999999999988 99999986533211 11111 12 788999999999999887 8999999
Q ss_pred cCCCCCCCC---CCch-------------------------------------------hhHHHHHHHHHHHHHHHHHH-
Q 025065 86 TASPVIFLS---DNPQ-------------------------------------------EWYSLAKTLAEEAAWKFAKE- 118 (258)
Q Consensus 86 ~a~~~~~~~---~~~~-------------------------------------------~~Y~~sK~~~e~~~~~~~~~- 118 (258)
+||...... .... +.|+.+|...|.+++.++.+
T Consensus 73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~ 152 (207)
T 2yut_A 73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKEL 152 (207)
T ss_dssp CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999753311 0100 67999999999999998876
Q ss_pred --cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 119 --NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 119 --~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
+|++++++||+.++++.... .+. ..+.+++++|+|++++.+++++....
T Consensus 153 ~~~gi~v~~v~pg~v~t~~~~~-------------~~~----~~~~~~~~~dva~~~~~~~~~~~~~~ 203 (207)
T 2yut_A 153 LREGVHLVLVRLPAVATGLWAP-------------LGG----PPKGALSPEEAARKVLEGLFREPVPA 203 (207)
T ss_dssp HTTTCEEEEECCCCBCSGGGGG-------------GTS----CCTTCBCHHHHHHHHHHHHC--CCCS
T ss_pred hhhCCEEEEEecCcccCCCccc-------------cCC----CCCCCCCHHHHHHHHHHHHhCCCCcc
Confidence 69999999999999875211 111 34679999999999999998875443
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.5e-20 Score=146.46 Aligned_cols=179 Identities=16% Similarity=0.127 Sum_probs=130.1
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++++|++|++++.++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEA-VAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4577999999999999999999999999999999987643221 112222224578999999999998887765
Q ss_pred -CCcEEEecCCCCCCCCC--Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSD--NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~--~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||....... ... ..|+.+|...
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 167 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAV 167 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHH
Confidence 68999999998643221 111 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KAS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 183 (258)
+.+++.++.+ +|+++..++||.+.++...... .......+.... ....+.+++|+|++++.++... ...
T Consensus 168 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~----p~~r~~~~~dva~~~~~L~s~~~~~it 241 (256)
T 3gaf_A 168 NHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL--TPEIERAMLKHT----PLGRLGEAQDIANAALFLCSPAAAWIS 241 (256)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC--CHHHHHHHHTTC----TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc--CHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCCcccCcc
Confidence 9999998876 4899999999999887432111 112222333322 3446889999999999999753 235
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| .+++++
T Consensus 242 G~~i~vdg 249 (256)
T 3gaf_A 242 GQVLTVSG 249 (256)
T ss_dssp SCEEEEST
T ss_pred CCEEEECC
Confidence 6 556654
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=145.99 Aligned_cols=181 Identities=18% Similarity=0.099 Sum_probs=123.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh--------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------- 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------- 77 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+... ....++.....++.++.+|+++++++.+++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD-ECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999754321 111111111346889999999999888776
Q ss_pred CCCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 78 DGCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 78 ~~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
.++|+|||+||...... .... ..|+.+|..
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 177 (273)
T 1ae1_A 98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGA 177 (273)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHH
Confidence 46999999999853321 1111 579999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCc---cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNF---GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
.+.+++.++.+. |+++++++||.++++........ .......+.... ....+.+++|+|+++..++..+
T Consensus 178 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v~~l~s~~~ 253 (273)
T 1ae1_A 178 INQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT----PMGRAGKPQEVSALIAFLCFPAA 253 (273)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS----TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccc
Confidence 999999888764 89999999999998853321110 111122222111 2335789999999999998653
Q ss_pred -CCCc-eEEEeCC
Q 025065 181 -KASG-RYLLAGS 191 (258)
Q Consensus 181 -~~~~-~~~~~~~ 191 (258)
...| .+.+++.
T Consensus 254 ~~~tG~~i~vdGG 266 (273)
T 1ae1_A 254 SYITGQIIWADGG 266 (273)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCcCCCEEEECCC
Confidence 2356 4555543
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-20 Score=147.66 Aligned_cols=172 Identities=16% Similarity=0.130 Sum_probs=113.7
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|+..+++|++|||||+|+||++++++|+++|++|++++|+...... ...++...+.++.++++|+++++++.++++
T Consensus 1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAP-LVAEIEAAGGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHH-HHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHH
Confidence 4445678999999999999999999999999999999997654322 112222224578999999999999888776
Q ss_pred ---CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHH
Q 025065 79 ---GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK 105 (258)
++|++||+||...... .... ..|+.+|
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (252)
T 3h7a_A 80 AHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAK 159 (252)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred hhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHH
Confidence 6899999999854321 1111 6799999
Q ss_pred HHHHHHHHHHHHH---cCCcE-EEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 106 TLAEEAAWKFAKE---NGIDL-VAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~-~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
...+.+.+.++.+ .|+++ .++.||.|.++........ ........ . ... +..++|+|++++.++..+.
T Consensus 160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~---~~~~~~~~---~-~~~-~~~pedvA~~~~~l~s~~~ 231 (252)
T 3h7a_A 160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQ---MFGKDALA---N-PDL-LMPPAAVAGAYWQLYQQPK 231 (252)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------CCHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchh---hhhhhhhc---C-Ccc-CCCHHHHHHHHHHHHhCch
Confidence 9999999988876 47999 8999999987643321110 00111010 0 223 8999999999999998765
Q ss_pred C
Q 025065 182 A 182 (258)
Q Consensus 182 ~ 182 (258)
.
T Consensus 232 ~ 232 (252)
T 3h7a_A 232 S 232 (252)
T ss_dssp G
T ss_pred h
Confidence 3
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=146.01 Aligned_cols=179 Identities=19% Similarity=0.154 Sum_probs=123.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|++|||||+|+||++++++|+++|++|++.+++...........+.....++.++++|+++++++.++++ +
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999886655432222122222224578999999999998888765 6
Q ss_pred CcEEEecCCCCCCCC---CCch---------------------------------------------hhHHHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ---------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~---------------------------------------------~~Y~~sK~~~e~~ 111 (258)
+|++||+||...... .... ..|+.+|...+.+
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 185 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAM 185 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHHHH
Confidence 899999999864321 1111 6799999999999
Q ss_pred HHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc-e
Q 025065 112 AWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-R 185 (258)
Q Consensus 112 ~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~ 185 (258)
++.++.+. |+++..+.||.|.++....... ......+.... ....+..++|+|++++.++.... ..| .
T Consensus 186 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~~~~itG~~ 259 (267)
T 3u5t_A 186 THVLSKELRGRDITVNAVAPGPTATDLFLEGKS--DEVRDRFAKLA----PLERLGTPQDIAGAVAFLAGPDGAWVNGQV 259 (267)
T ss_dssp HHHHHHHTTTSCCEEEEEEECCBC-------------CHHHHHTSS----TTCSCBCHHHHHHHHHHHHSTTTTTCCSEE
T ss_pred HHHHHHHhhhhCCEEEEEEECCCcCccccccCC--HHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCccCCE
Confidence 99998874 8999999999998774322110 00112222221 33457899999999999997543 356 4
Q ss_pred EEEeCC
Q 025065 186 YLLAGS 191 (258)
Q Consensus 186 ~~~~~~ 191 (258)
+.++|.
T Consensus 260 i~vdGG 265 (267)
T 3u5t_A 260 LRANGG 265 (267)
T ss_dssp EEESSS
T ss_pred EEeCCC
Confidence 455543
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.5e-20 Score=147.47 Aligned_cols=182 Identities=19% Similarity=0.092 Sum_probs=127.6
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||...+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++ ..++.++++|++|++++.++++
T Consensus 1 M~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 1 MVMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIAR-IREEF---GPRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp ---CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH---GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---CCcceEEEccCCCHHHHHHHHHHH
Confidence 43334678999999999999999999999999999999987543211 11111 3578999999999988887654
Q ss_pred -----CCcEEEecCCCCCCCCC---Cch---------------------------------------------hhHHHHH
Q 025065 79 -----GCDGVFHTASPVIFLSD---NPQ---------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~~---~~~---------------------------------------------~~Y~~sK 105 (258)
++|++||+||....... ... ..|+.+|
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 156 (255)
T 4eso_A 77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASK 156 (255)
T ss_dssp HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHH
Confidence 68999999998643211 111 6799999
Q ss_pred HHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCC-CCc-c-HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 106 TLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPI-LNF-G-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 106 ~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~-~~~-~-~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
...+.+.+.++.+. |+++..++||.|.++..... ... . ..+........ ....+.+++|+|++++.++..
T Consensus 157 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~ 232 (255)
T 4eso_A 157 AALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNIT----PMKRNGTADEVARAVLFLAFE 232 (255)
T ss_dssp HHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccC----CCCCCcCHHHHHHHHHHHcCc
Confidence 99999999998774 89999999999998854321 111 0 11111111111 334578999999999998875
Q ss_pred -CCCCc-eEEEeC
Q 025065 180 -PKASG-RYLLAG 190 (258)
Q Consensus 180 -~~~~~-~~~~~~ 190 (258)
....| .+.++|
T Consensus 233 ~~~itG~~i~vdG 245 (255)
T 4eso_A 233 ATFTTGAKLAVDG 245 (255)
T ss_dssp CTTCCSCEEEEST
T ss_pred CcCccCCEEEECC
Confidence 23456 555553
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=7.2e-20 Score=146.86 Aligned_cols=178 Identities=16% Similarity=0.169 Sum_probs=128.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|+||||||+|+||++++++|+++|++|++++++...........+.....++.++.+|+++.+++.++++ +
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGE 91 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999999999988544443222222222224578999999999998887765 6
Q ss_pred CcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||...... .... ..|+.+|.+.+
T Consensus 92 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 171 (256)
T 3ezl_A 92 IDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIH 171 (256)
T ss_dssp EEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHHHH
Confidence 899999999864321 1111 68999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 184 (258)
.+++.++.+ .|+++.+++||.+.++..... .......+.... ....+..++|+|++++.++... ...|
T Consensus 172 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~~~~~~tG 244 (256)
T 3ezl_A 172 GFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATI----PVRRLGSPDEIGSIVAWLASEESGFSTG 244 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhCCEEEEEEECcccCcccccc---CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCCcccCCcC
Confidence 999988876 589999999999987753322 122233333222 3345789999999999998653 3456
Q ss_pred -eEEEeCC
Q 025065 185 -RYLLAGS 191 (258)
Q Consensus 185 -~~~~~~~ 191 (258)
.+.+++.
T Consensus 245 ~~i~vdgG 252 (256)
T 3ezl_A 245 ADFSLNGG 252 (256)
T ss_dssp CEEEESTT
T ss_pred cEEEECCC
Confidence 5555543
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=148.42 Aligned_cols=181 Identities=18% Similarity=0.082 Sum_probs=122.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC-ccchhhccccCc-CCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS-PKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+... .. .....+... ..++.++.+|+++++++.++++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIE-KVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHH-HHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHH-HHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999999987643 21 111111111 2468899999999998887765
Q ss_pred --CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHH
Q 025065 79 --GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||...... .... ..|+.+|.
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence 6999999999754211 1111 67999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCcc--------HHHHHHH-HcCCCCCCCCcceeeHHHHHHHHH
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFG--------AEVILNL-INGDQSFAFPYIFVEIRDVVYAHI 174 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~--------~~~~~~~-~~g~~~~~~~~~~i~v~D~a~~~~ 174 (258)
..+.+++.++.+. |+++++++||.+.++......... ......+ .... ....+.+++|+|++++
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~p~dva~~~~ 236 (260)
T 1x1t_A 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ----PSLQFVTPEQLGGTAV 236 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHC----TTCCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccC----CCCCCcCHHHHHHHHH
Confidence 9999999888763 899999999999987533211100 0000110 0000 2346889999999999
Q ss_pred HhhcCC--CCCc-eEEEeCC
Q 025065 175 RALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 175 ~~~~~~--~~~~-~~~~~~~ 191 (258)
.++..+ ...| .+.+++.
T Consensus 237 ~l~s~~~~~~tG~~~~vdgG 256 (260)
T 1x1t_A 237 FLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHhChhhcCCCCCEEEECCC
Confidence 998753 2356 5555543
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.3e-19 Score=143.77 Aligned_cols=182 Identities=13% Similarity=0.071 Sum_probs=129.4
Q ss_pred CCCCCCCcEEEEECCcch--HHHHHHHHHHHCCCEEEEEEcCCCCccchhhccc-cCc-CCcEEEEEccCCCcccHHHHh
Q 025065 2 MSGEGEEKVVCVTGASGF--VASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGA-TERLHLFKANLLEEGSFDSAV 77 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~-~~~~~~~~~Dl~~~~~~~~~~ 77 (258)
|+..+++|++|||||+|+ ||++++++|+++|++|++++|+..... ...++ ... ..++.++++|+++++++.+++
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK--SVHELAGTLDRNDSIILPCDVTNDAEIETCF 78 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH--HHHHHHHTSSSCCCEEEECCCSSSHHHHHHH
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH--HHHHHHHhcCCCCceEEeCCCCCHHHHHHHH
Confidence 444567899999999988 999999999999999999998743221 11111 111 236899999999999888776
Q ss_pred C-------CCcEEEecCCCCCC----C---CCCch---------------------------------------------
Q 025065 78 D-------GCDGVFHTASPVIF----L---SDNPQ--------------------------------------------- 98 (258)
Q Consensus 78 ~-------~~d~Vih~a~~~~~----~---~~~~~--------------------------------------------- 98 (258)
+ ++|+|||+||.... . .....
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 158 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNY 158 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT
T ss_pred HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCc
Confidence 5 68999999998541 1 01111
Q ss_pred hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 99 EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 99 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
..|+.+|...+.+++.++.+ .|+++..++||.|.++...... ............. ....+..++|+|++++.
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----~~~~~~~p~dva~~v~~ 233 (266)
T 3oig_A 159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS-DFNSILKDIEERA----PLRRTTTPEEVGDTAAF 233 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHS----TTSSCCCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc-chHHHHHHHHhcC----CCCCCCCHHHHHHHHHH
Confidence 67999999999999988876 3899999999999887543321 1122222222221 23457899999999999
Q ss_pred hhcCCC--CCc-eEEEeC
Q 025065 176 ALEVPK--ASG-RYLLAG 190 (258)
Q Consensus 176 ~~~~~~--~~~-~~~~~~ 190 (258)
++.... ..| .+.+++
T Consensus 234 l~s~~~~~~tG~~i~vdG 251 (266)
T 3oig_A 234 LFSDMSRGITGENLHVDS 251 (266)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HcCCchhcCcCCEEEECC
Confidence 998643 456 455554
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=146.98 Aligned_cols=184 Identities=18% Similarity=0.135 Sum_probs=129.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCcc-------c----hhhccccCcCCcEEEEEccCCCcccHH
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-------T----EHLRELDGATERLHLFKANLLEEGSFD 74 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 74 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..... . .....+.....++.++++|+++++++.
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS 90 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 56799999999999999999999999999999998732110 0 111111122457899999999999988
Q ss_pred HHhC-------CCcEEEecCCCCCCCCCCch-------------------------------------------------
Q 025065 75 SAVD-------GCDGVFHTASPVIFLSDNPQ------------------------------------------------- 98 (258)
Q Consensus 75 ~~~~-------~~d~Vih~a~~~~~~~~~~~------------------------------------------------- 98 (258)
++++ ++|+|||+||..........
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 170 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADP 170 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCC
Confidence 8775 79999999998644321111
Q ss_pred --hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHH-cCC--CCCC--CCcceeeHHH
Q 025065 99 --EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLI-NGD--QSFA--FPYIFVEIRD 168 (258)
Q Consensus 99 --~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~g~--~~~~--~~~~~i~v~D 168 (258)
..|+.+|...+.+++.++.+. |+++..++||.|.++..... .....+.... ... ..+. ....+.+++|
T Consensus 171 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~d 248 (278)
T 3sx2_A 171 GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAAATDTPGAMGNAMPVEVLAPED 248 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHHHCC--CTTSCSSSCSSBCHHH
T ss_pred CchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--hHHHHHhhccchhhhhhhhhhhcCcCcCCHHH
Confidence 359999999999999988764 79999999999998864321 1111111111 111 1122 1267899999
Q ss_pred HHHHHHHhhcCC--CCCc-eEEEeCC
Q 025065 169 VVYAHIRALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 169 ~a~~~~~~~~~~--~~~~-~~~~~~~ 191 (258)
+|++++.++... ...| .+.+++.
T Consensus 249 vA~~v~~l~s~~~~~itG~~i~vdGG 274 (278)
T 3sx2_A 249 VANAVAWLVSDQARYITGVTLPVDAG 274 (278)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhCcccccccCCEEeECCC
Confidence 999999999754 3456 5555543
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-19 Score=145.76 Aligned_cols=178 Identities=19% Similarity=0.152 Sum_probs=124.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+||||||+|+||++++++|+++|++|++++|+.+... .....+.....++.++.+|+++++++.++++
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD-SVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHH-HHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 45789999999999999999999999999999887643321 1112222223568899999999998888763
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~ 200 (285)
T 2c07_A 121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV 200 (285)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHH
Confidence 6899999999864321 1111 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++.+ .|++++++|||.+.++..... ............ ....+++++|+|++++.++..+. ..
T Consensus 201 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~dvA~~~~~l~~~~~~~~~ 273 (285)
T 2c07_A 201 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNI----PAGRMGTPEEVANLACFLSSDKSGYIN 273 (285)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTC----TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc---CHHHHHHHHhhC----CCCCCCCHHHHHHHHHHHhCCCcCCCC
Confidence 9999888766 389999999999998753321 122222222221 23358899999999999987643 35
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.+++.
T Consensus 274 G~~i~v~gG 282 (285)
T 2c07_A 274 GRVFVIDGG 282 (285)
T ss_dssp SCEEEESTT
T ss_pred CCEEEeCCC
Confidence 5 5555543
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.6e-20 Score=147.57 Aligned_cols=179 Identities=18% Similarity=0.130 Sum_probs=128.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.. ...++.++++|++|++++.++++
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDA-ARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999997543321 1111111 13578999999999998887765
Q ss_pred -CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~ 106 (258)
++|++||+||...... .... ..|+.+|.
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 176 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKA 176 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHH
Confidence 6899999999864321 1111 67999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
..+.+++.++.+ +|+++..++||.|.++....... .......+.... ....+..++|+|++++.++... .
T Consensus 177 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~----p~~r~~~p~dva~~v~~L~s~~~~~ 251 (266)
T 4egf_A 177 GLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIARI----PLGRFAVPHEVSDAVVWLASDAASM 251 (266)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC-SHHHHHHHHTTC----TTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc-ChHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhcC
Confidence 999999998876 48999999999998764221111 111222233322 3345789999999999998753 3
Q ss_pred CCc-eEEEeC
Q 025065 182 ASG-RYLLAG 190 (258)
Q Consensus 182 ~~~-~~~~~~ 190 (258)
..| .+.+++
T Consensus 252 itG~~i~vdG 261 (266)
T 4egf_A 252 INGVDIPVDG 261 (266)
T ss_dssp CCSCEEEEST
T ss_pred ccCcEEEECC
Confidence 456 455554
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.9e-20 Score=150.93 Aligned_cols=182 Identities=16% Similarity=0.119 Sum_probs=126.4
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-----cCCcEEEEEccCCCcccHHHHhC-
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-----ATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
.+++|+||||||+|+||++++++|+++|++|++++|+...... ...++.. ...++.++.+|+++++++.++++
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKS-AADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999987543211 1111110 13578999999999998888775
Q ss_pred ------CCcEEEecCCCCCCCC---CCch----------------------------------------------hhHHH
Q 025065 79 ------GCDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSL 103 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~ 103 (258)
++|+|||+||...... .... ..|+.
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~Y~~ 173 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGA 173 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCCcchhhHH
Confidence 4899999999643211 1111 56999
Q ss_pred HHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCc-cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 104 AKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNF-GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 104 sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+|...+.+.+.++.+. |++++++|||.++|+........ ........... . ....+.+++|+|++++.++..
T Consensus 174 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---~-p~~~~~~~~dvA~~i~~l~~~ 249 (303)
T 1yxm_A 174 ARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK---I-PAKRIGVPEEVSSVVCFLLSP 249 (303)
T ss_dssp HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG---S-TTSSCBCTHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc---C-cccCCCCHHHHHHHHHHHhCc
Confidence 9999999999888774 89999999999999842111110 00011111111 1 234588999999999999975
Q ss_pred CC--CCc-eEEEeCC
Q 025065 180 PK--ASG-RYLLAGS 191 (258)
Q Consensus 180 ~~--~~~-~~~~~~~ 191 (258)
.. ..| .+.+++.
T Consensus 250 ~~~~~~G~~~~v~gG 264 (303)
T 1yxm_A 250 AASFITGQSVDVDGG 264 (303)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred ccccCCCcEEEECCC
Confidence 42 356 5555543
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=152.27 Aligned_cols=190 Identities=15% Similarity=0.086 Sum_probs=127.4
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC--
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
+.++++|++|||||+|+||++++++|+++|++|++++|+...... ....+.. ...++.++.+|++|++++.++++
T Consensus 2 ~~m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (267)
T 2gdz_A 2 AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQ-CKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKV 80 (267)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CcccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHH
Confidence 333567899999999999999999999999999999987543211 1111111 12468899999999998887765
Q ss_pred -----CCcEEEecCCCCCCCCCC-----------------------------ch----------------hhHHHHHHHH
Q 025065 79 -----GCDGVFHTASPVIFLSDN-----------------------------PQ----------------EWYSLAKTLA 108 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~~~-----------------------------~~----------------~~Y~~sK~~~ 108 (258)
++|+|||+||........ .. ..|+.+|...
T Consensus 81 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 160 (267)
T 2gdz_A 81 VDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGI 160 (267)
T ss_dssp HHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHH
Confidence 479999999974321100 00 5799999999
Q ss_pred HHHHHHHH-----HHcCCcEEEEcCCccccCCcCCCCCccHH-----HHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 109 EEAAWKFA-----KENGIDLVAIHPGTVIGPFFQPILNFGAE-----VILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 109 e~~~~~~~-----~~~~~~~~ilRp~~v~G~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+.+++.++ ...|+++++++||.+.++........... ........ . ....+++++|+|++++.++.
T Consensus 161 ~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~dvA~~v~~l~s 236 (267)
T 2gdz_A 161 VGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM---I-KYYGILDPPLIANGLITLIE 236 (267)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHH---H-HHHCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHH---h-ccccCCCHHHHHHHHHHHhc
Confidence 99988742 23689999999999987642211000000 00000000 0 12347899999999999998
Q ss_pred CCCCCc-eEEEe-CCCcCHHH
Q 025065 179 VPKASG-RYLLA-GSVAQHSD 197 (258)
Q Consensus 179 ~~~~~~-~~~~~-~~~~t~~e 197 (258)
.+...| .+.++ ++..++.|
T Consensus 237 ~~~~~G~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 237 DDALNGAIMKITTSKGIHFQD 257 (267)
T ss_dssp CTTCSSCEEEEETTTEEEECC
T ss_pred CcCCCCcEEEecCCCcccccC
Confidence 766666 56444 55555543
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-19 Score=144.95 Aligned_cols=178 Identities=17% Similarity=0.081 Sum_probs=123.7
Q ss_pred CCCcEEEEECCcc-hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASG-FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+| .||++++++|+++|++|++++|+...... ...++.. ...++.++++|+++++++.++++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGE-TRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHH-HHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 5678999999998 59999999999999999999987644322 1111211 13579999999999998887765
Q ss_pred --CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK 105 (258)
++|+|||+||....... ... ..|+.+|
T Consensus 99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 178 (266)
T 3o38_A 99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAK 178 (266)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHH
Confidence 68999999998543211 111 6799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
.+.+.+++.++.+ +|+++.+++||.|.++....... ......+.... ....+.+++|+|++++.++...
T Consensus 179 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~----~~~r~~~~~dva~~i~~l~s~~~~ 252 (266)
T 3o38_A 179 AGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--SELLDRLASDE----AFGRAAEPWEVAATIAFLASDYSS 252 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CC----TTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--HHHHHHHHhcC----CcCCCCCHHHHHHHHHHHcCcccc
Confidence 9999999988876 58999999999998875332111 01111111111 3456889999999999998763
Q ss_pred CCCc-eEEEeC
Q 025065 181 KASG-RYLLAG 190 (258)
Q Consensus 181 ~~~~-~~~~~~ 190 (258)
...| .+.+++
T Consensus 253 ~~tG~~i~vdg 263 (266)
T 3o38_A 253 YMTGEVVSVSS 263 (266)
T ss_dssp TCCSCEEEESS
T ss_pred CccCCEEEEcC
Confidence 3456 445554
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-19 Score=142.09 Aligned_cols=176 Identities=17% Similarity=0.158 Sum_probs=124.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh---CCCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV---DGCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~ 82 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..+... +.+ ..++.++.+|+++++++.+++ .++|+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 77 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE--LEK----YPGIQTRVLDVTKKKQIDQFANEVERLDV 77 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG--GGG----STTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH--HHh----ccCceEEEeeCCCHHHHHHHHHHhCCCCE
Confidence 467899999999999999999999999999999987533211 111 136889999999999888664 46899
Q ss_pred EEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHHHHHH
Q 025065 83 VFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 83 Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~~e~~ 111 (258)
|||+||...... .... ..|+.+|...+.+
T Consensus 78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~ 157 (246)
T 2ag5_A 78 LFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGL 157 (246)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHH
Confidence 999999754311 1111 4699999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCC---CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPIL---NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
++.++.+ +|++++++|||.++++...... .........+.... ....+..++|+|++++.++..+. ..
T Consensus 158 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dvA~~v~~l~s~~~~~~t 233 (246)
T 2ag5_A 158 TKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ----KTGRFATAEEIAMLCVYLASDESAYVT 233 (246)
T ss_dssp HHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC----TTSSCEEHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCccccCCC
Confidence 9998876 4899999999999987422100 00111122222221 22358899999999999987542 35
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.+++.
T Consensus 234 G~~i~vdgG 242 (246)
T 2ag5_A 234 GNPVIIDGG 242 (246)
T ss_dssp SCEEEECTT
T ss_pred CCEEEECCC
Confidence 6 4455543
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-19 Score=142.19 Aligned_cols=175 Identities=19% Similarity=0.150 Sum_probs=127.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ....+ ......+++|++|++++.++++
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQA-ISDYL---GDNGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---cccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999987543221 11111 2357889999999998888775
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||....... ... ..|+.+|...
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 162 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGV 162 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHH
Confidence 79999999998643211 111 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+.+.++.+ +|+++..++||.+.++..... ............ ....+.+++|+|+++..++.... ..
T Consensus 163 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~----p~~r~~~p~dva~~v~~L~s~~~~~it 235 (248)
T 3op4_A 163 IGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL---NDEQRTATLAQV----PAGRLGDPREIASAVAFLASPEAAYIT 235 (248)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS---CHHHHHHHHHTC----TTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc---CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCCccCCcc
Confidence 9999988876 489999999999988754322 111222222222 34568899999999999987543 35
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.+++.
T Consensus 236 G~~i~vdgG 244 (248)
T 3op4_A 236 GETLHVNGG 244 (248)
T ss_dssp SCEEEESTT
T ss_pred CcEEEECCC
Confidence 6 4566544
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.2e-19 Score=142.45 Aligned_cols=175 Identities=17% Similarity=0.164 Sum_probs=125.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ...++ ..++.++.+|+++++++.++++
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA-QAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG 85 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH-HHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHH-HHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 467899999999999999999999999999999998654321 11111 2468999999999999888776
Q ss_pred CCcEEEecCCCCCCCC---------CCch---------------------------------------------------
Q 025065 79 GCDGVFHTASPVIFLS---------DNPQ--------------------------------------------------- 98 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---------~~~~--------------------------------------------------- 98 (258)
++|+|||+||...... ....
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 165 (265)
T 2o23_A 86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV 165 (265)
T ss_dssp CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred CCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCC
Confidence 7999999999753211 0000
Q ss_pred --hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 99 --EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 99 --~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
..|+.+|...+.+++.++.+ .|+++++++||.+.++........ ........ .|....+.+++|+|+++
T Consensus 166 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~dva~~~ 239 (265)
T 2o23_A 166 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK---VCNFLASQ---VPFPSRLGDPAEYAHLV 239 (265)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHT---CSSSCSCBCHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH---HHHHHHHc---CCCcCCCCCHHHHHHHH
Confidence 57999999999999888766 489999999999988753321100 00111111 11114578999999999
Q ss_pred HHhhcCCCCCc-eEEEeC
Q 025065 174 IRALEVPKASG-RYLLAG 190 (258)
Q Consensus 174 ~~~~~~~~~~~-~~~~~~ 190 (258)
+.++..+...| .+.+.+
T Consensus 240 ~~l~~~~~~~G~~i~vdg 257 (265)
T 2o23_A 240 QAIIENPFLNGEVIRLDG 257 (265)
T ss_dssp HHHHHCTTCCSCEEEEST
T ss_pred HHHhhcCccCceEEEECC
Confidence 99998766667 455554
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=145.55 Aligned_cols=176 Identities=15% Similarity=0.111 Sum_probs=122.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCE-EEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc-ccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~----- 78 (258)
+++|+++||||+|+||++++++|+++|++ |++++|+......+.+..... ..++.++.+|++++ +++.++++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 46789999999999999999999999996 999998764311122211110 24688999999998 77776664
Q ss_pred --CCcEEEecCCCCCCCCCCch---------------------------------------------hhHHHHHHHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSDNPQ---------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~~~~---------------------------------------------~~Y~~sK~~~e~~ 111 (258)
++|+|||+||.......... ..|+.+|...+.+
T Consensus 82 ~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 161 (254)
T 1sby_A 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF 161 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHH
Confidence 79999999997432110000 5799999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCcc--HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-e
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFG--AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-R 185 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~ 185 (258)
++.++.+ +|+++++++||.+.++......... ...+..... ...+.+++|+|++++.++... ..| .
T Consensus 162 ~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dvA~~i~~~~~~~-~~G~~ 233 (254)
T 1sby_A 162 TNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL-------SHPTQTSEQCGQNFVKAIEAN-KNGAI 233 (254)
T ss_dssp HHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT-------TSCCEEHHHHHHHHHHHHHHC-CTTCE
T ss_pred HHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh-------cCCCCCHHHHHHHHHHHHHcC-CCCCE
Confidence 9888765 6899999999999987432210000 001112221 123569999999999998754 345 6
Q ss_pred EEEeC
Q 025065 186 YLLAG 190 (258)
Q Consensus 186 ~~~~~ 190 (258)
|.+++
T Consensus 234 ~~v~g 238 (254)
T 1sby_A 234 WKLDL 238 (254)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 66654
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=146.47 Aligned_cols=175 Identities=19% Similarity=0.180 Sum_probs=125.2
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+...... ...++ ..++.++++|++|++++.++++
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADA-AATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 4577899999999999999999999999999999987543221 11111 3568899999999988887665
Q ss_pred -CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||...... .... ..|+.+|..
T Consensus 102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa 181 (277)
T 3gvc_A 102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAG 181 (277)
T ss_dssp SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHH
Confidence 6899999999864321 1111 679999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.+.+++.++.+ +|+++.+++||.|+++....... ......... ....+.+++|+|++++.+
T Consensus 182 ~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~r~~~pedvA~~v~~L 253 (277)
T 3gvc_A 182 IIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIAR--------LQGRMAAPEEMAGIVVFL 253 (277)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHH--------HHSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhc--------cccCCCCHHHHHHHHHHH
Confidence 99999988876 58999999999999874211000 000000011 123478999999999999
Q ss_pred hcCC--CCCc-eEEEeCC
Q 025065 177 LEVP--KASG-RYLLAGS 191 (258)
Q Consensus 177 ~~~~--~~~~-~~~~~~~ 191 (258)
+... ...| .+.++|.
T Consensus 254 ~s~~a~~itG~~i~vdGG 271 (277)
T 3gvc_A 254 LSDDASMITGTTQIADGG 271 (277)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred cCCccCCccCcEEEECCc
Confidence 9754 3456 5566543
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=144.29 Aligned_cols=178 Identities=20% Similarity=0.195 Sum_probs=119.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+...... ...++ ...+.++.+|+++.+++.++++
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAER-VAGEI---GDAALAVAADISKEADVDAAVEAALSKF 81 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3467999999999999999999999999999999987643321 11111 3578999999999998887765
Q ss_pred -CCcEEEecCCCCCC-CCC---Cch---------------------------------------------------hhHH
Q 025065 79 -GCDGVFHTASPVIF-LSD---NPQ---------------------------------------------------EWYS 102 (258)
Q Consensus 79 -~~d~Vih~a~~~~~-~~~---~~~---------------------------------------------------~~Y~ 102 (258)
++|+|||+||.... ... ... ..|+
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~ 161 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYN 161 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHH
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHH
Confidence 68999999998542 111 111 5699
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCcc-HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFG-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
.+|.+.+.+++.++.+ +++++..++||.+.++......... ......+.... ....+++++|+|++++.++.
T Consensus 162 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s 237 (261)
T 3n74_A 162 ATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSI----PMGRLLKPDDLAEAAAFLCS 237 (261)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------C----TTSSCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcC----CcCCCcCHHHHHHHHHHHcC
Confidence 9999999999998877 5899999999999887543221100 00111111111 34568999999999999996
Q ss_pred CCC--CCc-eEEEeC
Q 025065 179 VPK--ASG-RYLLAG 190 (258)
Q Consensus 179 ~~~--~~~-~~~~~~ 190 (258)
... ..| .+.+++
T Consensus 238 ~~~~~itG~~i~vdg 252 (261)
T 3n74_A 238 PQASMITGVALDVDG 252 (261)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred CcccCcCCcEEEecC
Confidence 432 456 555553
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=145.42 Aligned_cols=175 Identities=17% Similarity=0.127 Sum_probs=127.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++.+|+...... .... ...++.++.+|++|++++.++++
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKE-IAAD---LGKDVFVFSANLSDRKSIKQLAEVAEREME 100 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHH---HCSSEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHH---hCCceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999986533211 1111 13578999999999998888775
Q ss_pred CCcEEEecCCCCCCCC-CC-c-h-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS-DN-P-Q-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~-~~-~-~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .+ . . ..|+.+|...
T Consensus 101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~ 180 (266)
T 3grp_A 101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGL 180 (266)
T ss_dssp SCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHH
Confidence 6899999999864321 11 1 1 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+++.++.+ .|+++.+++||.|.++..... .......+.... ....+.+++|+|++++.++.... ..
T Consensus 181 ~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~----p~~r~~~~edvA~~v~~L~s~~~~~it 253 (266)
T 3grp_A 181 IGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL---NEKQKEAIMAMI----PMKRMGIGEEIAFATVYLASDEAAYLT 253 (266)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC---CHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc---CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCcc
Confidence 9999988876 489999999999988743321 122223333332 34457899999999999987543 35
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.+++.
T Consensus 254 G~~i~vdGG 262 (266)
T 3grp_A 254 GQTLHINGG 262 (266)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 6 4555543
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-19 Score=144.75 Aligned_cols=171 Identities=19% Similarity=0.113 Sum_probs=125.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
.++|+||||||+|+||++++++|+++|++|++++|+..... .....+++|+++++++.++++
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----------NVSDHFKIDVTNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----------TSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----------CceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999998765431 246788999999998887765
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||....... ... ..|+.+|...
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 160 (269)
T 3vtz_A 81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHAL 160 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHH
Confidence 68999999998543211 111 6799999999
Q ss_pred HHHHHHHHHHc--CCcEEEEcCCccccCCcCCC--------CCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 109 EEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPI--------LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 109 e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+.+++.++.+. ++++.+++||.|.++..... ..........+.... ....+.+++|+|++++.++.
T Consensus 161 ~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s 236 (269)
T 3vtz_A 161 LGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH----PMGRIGRPEEVAEVVAFLAS 236 (269)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhC
Confidence 99999998876 79999999999988642110 000011122221111 34568899999999999987
Q ss_pred CCC--CCc-eEEEeCC
Q 025065 179 VPK--ASG-RYLLAGS 191 (258)
Q Consensus 179 ~~~--~~~-~~~~~~~ 191 (258)
... ..| .+.+++.
T Consensus 237 ~~~~~itG~~i~vdGG 252 (269)
T 3vtz_A 237 DRSSFITGACLTVDGG 252 (269)
T ss_dssp GGGTTCCSCEEEESTT
T ss_pred CccCCCcCcEEEECCC
Confidence 542 456 5566654
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=145.80 Aligned_cols=179 Identities=16% Similarity=0.142 Sum_probs=127.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+...... ...+ ...++.++++|+++++++.++++
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVR-VANE---IGSKAFGVRVDVSSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHH---HCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3567899999999999999999999999999999987533211 1111 13568899999999998887775
Q ss_pred -CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||...... .... ..|+.+|.+
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 179 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGA 179 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHH
Confidence 6899999999753321 1111 679999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccccCCcCC---CCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP---ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
.+.+++.++.+. |+++.+++||.|.++.... ................ ....+.+++|+|++++.++....
T Consensus 180 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~----~~~r~~~pedvA~~v~~L~s~~~ 255 (277)
T 4dqx_A 180 ISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA----VMDRMGTAEEIAEAMLFLASDRS 255 (277)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS----TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC----cccCCcCHHHHHHHHHHHhCCcc
Confidence 999999988764 8999999999998764110 0011111111122222 33457899999999999997543
Q ss_pred --CCc-eEEEeCC
Q 025065 182 --ASG-RYLLAGS 191 (258)
Q Consensus 182 --~~~-~~~~~~~ 191 (258)
..| .+.++|.
T Consensus 256 ~~itG~~i~vdGG 268 (277)
T 4dqx_A 256 RFATGSILTVDGG 268 (277)
T ss_dssp TTCCSCEEEESSS
T ss_pred CCCcCCEEEECCc
Confidence 356 5555543
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.9e-20 Score=147.73 Aligned_cols=182 Identities=16% Similarity=0.101 Sum_probs=126.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|+++++++.++++
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDR-TVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG 90 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999999987543211 111121123468889999999988887765
Q ss_pred CCcEEEecCCCCCC--C--CCCch-----------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIF--L--SDNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~--~--~~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||.... . ..... ..|+.+|..
T Consensus 91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 170 (260)
T 2zat_A 91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTA 170 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHH
Confidence 79999999997431 1 11111 579999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--C
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--A 182 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~ 182 (258)
.+.+++.++.+. |+++++++||.+.++....... ..........+. ....+.+++|+|+++..++..+. .
T Consensus 171 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~dva~~v~~l~s~~~~~~ 245 (260)
T 2zat_A 171 LLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM-DKARKEYMKESL----RIRRLGNPEDCAGIVSFLCSEDASYI 245 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS-SHHHHHHHHHHH----TCSSCBCGGGGHHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc-ChHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCcccCCc
Confidence 999999988764 8999999999998875321000 000111111111 34468899999999999987643 3
Q ss_pred Cc-eEEEe-CCCc
Q 025065 183 SG-RYLLA-GSVA 193 (258)
Q Consensus 183 ~~-~~~~~-~~~~ 193 (258)
.| .++++ |...
T Consensus 246 tG~~~~vdgG~~~ 258 (260)
T 2zat_A 246 TGETVVVGGGTAS 258 (260)
T ss_dssp CSCEEEESTTCCC
T ss_pred cCCEEEECCCccc
Confidence 55 56555 4443
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=144.32 Aligned_cols=175 Identities=17% Similarity=0.122 Sum_probs=123.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~ 82 (258)
.++++||||||+|+||++++++|+++|++|++++|+.+.... ....+ ..++.++.+|+++.+++.++++ ++|+
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKS-LGNAL---KDNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH---CSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHh---ccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 467899999999999999999999999999999986543211 11111 2468899999999999998886 6899
Q ss_pred EEecCCCCCCCC------CCch--------------------------------------------hhHHHHHHHHHHHH
Q 025065 83 VFHTASPVIFLS------DNPQ--------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 83 Vih~a~~~~~~~------~~~~--------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
|||+||...... .+.. ..|+.+|.+.+.++
T Consensus 88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~ 167 (249)
T 3f9i_A 88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMT 167 (249)
T ss_dssp EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHH
Confidence 999999854211 1111 67999999999999
Q ss_pred HHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eE
Q 025065 113 WKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RY 186 (258)
Q Consensus 113 ~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~ 186 (258)
+.++.+ .|+++.+++||.|.++..... ..........+. ....+.+++|+|+++..++..+. ..| .+
T Consensus 168 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~ 240 (249)
T 3f9i_A 168 KSLSYEVATRGITVNAVAPGFIKSDMTDKL---NEKQREAIVQKI----PLGTYGIPEDVAYAVAFLASNNASYITGQTL 240 (249)
T ss_dssp HHHHHHHGGGTEEEEEEEECCBC------C---CHHHHHHHHHHC----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHcCcEEEEEecCccccCccccc---CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCCccCCccCcEE
Confidence 988876 589999999999988754322 112222222222 34568899999999999997643 346 55
Q ss_pred EEeCC
Q 025065 187 LLAGS 191 (258)
Q Consensus 187 ~~~~~ 191 (258)
++++.
T Consensus 241 ~vdgG 245 (249)
T 3f9i_A 241 HVNGG 245 (249)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 66544
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-20 Score=148.09 Aligned_cols=180 Identities=16% Similarity=0.086 Sum_probs=127.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|++|||||+|+||++++++|+++|++|++++|+..... .....+.....++.++.+|+++++++.++++ +
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVS-AAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5689999999999999999999999999999998754322 1122222234678999999999998887765 6
Q ss_pred CcEEEecCCCCCCCCC---Cch-------------------------------------------------hhHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSD---NPQ-------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~---~~~-------------------------------------------------~~Y~~sK~~ 107 (258)
+|+|||+||....... ... ..|+.+|..
T Consensus 102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa 181 (279)
T 3sju_A 102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHG 181 (279)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHH
Confidence 8999999998543211 111 679999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCC-------CC-ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI-------LN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~-------~~-~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.+.+++.++.+ +|+++.+++||.|.++..... .. ........+.... ....+..++|+|++++.+
T Consensus 182 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L 257 (279)
T 3sju_A 182 VVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI----PLGRYSTPEEVAGLVGYL 257 (279)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC----TTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC----CCCCCCCHHHHHHHHHHH
Confidence 99999998877 589999999999987632110 00 1112222222222 344578999999999999
Q ss_pred hcCCC--CCc-eEEEeCC
Q 025065 177 LEVPK--ASG-RYLLAGS 191 (258)
Q Consensus 177 ~~~~~--~~~-~~~~~~~ 191 (258)
+.... ..| .++++|.
T Consensus 258 ~s~~a~~itG~~i~vdGG 275 (279)
T 3sju_A 258 VTDAAASITAQALNVCGG 275 (279)
T ss_dssp TSSGGGGCCSCEEEESTT
T ss_pred hCccccCcCCcEEEECCC
Confidence 87643 456 4555544
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-20 Score=151.24 Aligned_cols=173 Identities=18% Similarity=0.121 Sum_probs=119.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++++|+++.+++.++++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQ-AVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999997644321 112222224578999999999998887765
Q ss_pred CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||...... .... ..|+.||..
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 187 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYG 187 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHH
Confidence 6899999999863311 1111 679999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcC
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+.+++.++.+. |+++++++||.|.++.......... ........ ..++ ....+++++|+|++++.++++
T Consensus 188 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~ 265 (301)
T 3tjr_A 188 VVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRG--ADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILA 265 (301)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC------------------------CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCcEEEEEECCccccccccccccccc--hhhccccChhhhccccccccCCCCHHHHHHHHHHHHhc
Confidence 999998888763 8999999999998764221000000 00000000 0111 345689999999999999987
Q ss_pred CC
Q 025065 180 PK 181 (258)
Q Consensus 180 ~~ 181 (258)
+.
T Consensus 266 ~~ 267 (301)
T 3tjr_A 266 NR 267 (301)
T ss_dssp TC
T ss_pred CC
Confidence 54
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=146.54 Aligned_cols=177 Identities=15% Similarity=0.156 Sum_probs=126.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++++..+..............++.++.+|++|.+++.++++
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3568899999999999999999999999999998654332222222222234678999999999998887765
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|.+.
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 182 (269)
T 3gk3_A 103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGI 182 (269)
T ss_dssp CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHH
Confidence 7999999999864321 1111 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCC--CCcceeeHHHHHHHHHHhhcCCC--
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA--FPYIFVEIRDVVYAHIRALEVPK-- 181 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~i~v~D~a~~~~~~~~~~~-- 181 (258)
+.+++.++.+ .|+++.+++||.|.++....... ...... ... ....+..++|+|++++.++....
T Consensus 183 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~-~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~ 254 (269)
T 3gk3_A 183 HGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ-------DVLEAK-ILPQIPVGRLGRPDEVAALIAFLCSDDAGF 254 (269)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------CC-SGGGCTTSSCBCHHHHHHHHHHHTSTTCTT
T ss_pred HHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch-------hHHHHH-hhhcCCcCCccCHHHHHHHHHHHhCCCcCC
Confidence 9999888876 48999999999998875432110 111101 111 34567899999999999997653
Q ss_pred CCc-eEEEeC
Q 025065 182 ASG-RYLLAG 190 (258)
Q Consensus 182 ~~~-~~~~~~ 190 (258)
..| .+++++
T Consensus 255 itG~~i~vdg 264 (269)
T 3gk3_A 255 VTGADLAING 264 (269)
T ss_dssp CCSCEEEEST
T ss_pred eeCcEEEECC
Confidence 456 555554
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-19 Score=145.99 Aligned_cols=179 Identities=16% Similarity=0.064 Sum_probs=125.1
Q ss_pred CCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+ |+||++++++|+++|++|++++|+.. . .....++.....++.++.+|+++++++.++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-L-EKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-G-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-H-HHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567899999999 99999999999999999999998763 1 11222221111236789999999998887765
Q ss_pred --CCcEEEecCCCCCC----C---CCCch----------------------------------------------hhHHH
Q 025065 79 --GCDGVFHTASPVIF----L---SDNPQ----------------------------------------------EWYSL 103 (258)
Q Consensus 79 --~~d~Vih~a~~~~~----~---~~~~~----------------------------------------------~~Y~~ 103 (258)
++|+|||+||.... . ..... ..|+.
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 176 (285)
T 2p91_A 97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGI 176 (285)
T ss_dssp TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHH
T ss_pred cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHH
Confidence 68999999997532 0 11111 57999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+++.++.+ .|+++++++||.|+++..... .........+.... ....+.+++|+|++++.++...
T Consensus 177 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~----p~~~~~~~~dva~~~~~l~s~~ 251 (285)
T 2p91_A 177 AKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-TGFHLLMEHTTKVN----PFGKPITIEDVGDTAVFLCSDW 251 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-TTHHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-cchHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCCc
Confidence 999999999988776 489999999999999864321 11122222222211 2234779999999999998653
Q ss_pred C--CCc-eEEEeCC
Q 025065 181 K--ASG-RYLLAGS 191 (258)
Q Consensus 181 ~--~~~-~~~~~~~ 191 (258)
. ..| .+.+++.
T Consensus 252 ~~~~tG~~~~vdgg 265 (285)
T 2p91_A 252 ARAITGEVVHVDNG 265 (285)
T ss_dssp GTTCCSCEEEESTT
T ss_pred ccCCCCCEEEECCC
Confidence 2 345 5555543
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=146.81 Aligned_cols=177 Identities=14% Similarity=0.111 Sum_probs=129.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++++|++|++++.++++
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQV-VADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH-HHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 567999999999999999999999999999999997644321 112222224578899999999999888776
Q ss_pred CCcEEEecCCCCCCCCC---Cch--------------------------------------------------hhHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ--------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~--------------------------------------------------~~Y~~sK 105 (258)
++|+|||+||....... ... ..|+.+|
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asK 188 (276)
T 3r1i_A 109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSK 188 (276)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHH
Confidence 79999999998643211 111 4599999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
...+.+++.++.+ .|+++..++||.|.++...... . ......... ....+..++|+|++++.++...
T Consensus 189 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~---~~~~~~~~~----p~~r~~~pedvA~~v~fL~s~~~~ 260 (276)
T 3r1i_A 189 AAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA-D---YHALWEPKI----PLGRMGRPEELTGLYLYLASAASS 260 (276)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG-G---GHHHHGGGS----TTSSCBCGGGSHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch-H---HHHHHHhcC----CCCCCcCHHHHHHHHHHHcCcccc
Confidence 9999999998877 5899999999999887543221 1 112222211 2345789999999999998753
Q ss_pred CCCc-eEEEeCC
Q 025065 181 KASG-RYLLAGS 191 (258)
Q Consensus 181 ~~~~-~~~~~~~ 191 (258)
...| .+.++|.
T Consensus 261 ~itG~~i~vdGG 272 (276)
T 3r1i_A 261 YMTGSDIVIDGG 272 (276)
T ss_dssp TCCSCEEEESTT
T ss_pred CccCcEEEECcC
Confidence 3456 4566554
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.4e-19 Score=141.09 Aligned_cols=159 Identities=19% Similarity=0.177 Sum_probs=119.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc-CcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
||++|||||+|+||++++++|+++|++|++++|+.+.... ...++. ....++.++++|+++++++.++++ +
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEK-IAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 6889999999999999999999999999999997643321 111111 113578999999999999888876 6
Q ss_pred CcEEEecCCCCCCCCC---Cch----------------------------------------------hhHHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSD---NPQ----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~---~~~----------------------------------------------~~Y~~sK~~~e~ 110 (258)
+|++||+||....... ... ..|+.+|...+.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~ 160 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARA 160 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHH
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHH
Confidence 8999999998643221 111 679999999999
Q ss_pred HHHHHHHH-cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCC
Q 025065 111 AAWKFAKE-NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 111 ~~~~~~~~-~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
+++.+..+ .+++++.++||.+..+....... . +....++.++|+|++++.++..+..
T Consensus 161 ~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~------------~---~~~~~~~~p~dva~~v~~l~~~~~~ 218 (235)
T 3l77_A 161 LVRTFQIENPDVRFFELRPGAVDTYFGGSKPG------------K---PKEKGYLKPDEIAEAVRCLLKLPKD 218 (235)
T ss_dssp HHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC------------C---CGGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHhhcCCCeEEEEEeCCccccccccccCC------------c---ccccCCCCHHHHHHHHHHHHcCCCC
Confidence 99888554 48999999999997764322110 0 0122478999999999999998753
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.1e-19 Score=142.34 Aligned_cols=175 Identities=16% Similarity=0.085 Sum_probs=124.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+... ....++ ..++.++.+|+++++++.++++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA-ATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 56789999999999999999999999999999998753321 111111 2468899999999998888776
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 158 (254)
T 1hdc_A 79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGV 158 (254)
T ss_dssp CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHH
Confidence 7999999999754311 1111 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCccee-eHHHHHHHHHHhhcCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFV-EIRDVVYAHIRALEVP--KA 182 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i-~v~D~a~~~~~~~~~~--~~ 182 (258)
+.+++.++.+ +|++++++|||.++++......... ... .. ... ....+. +++|+|++++.++..+ ..
T Consensus 159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~-~~--~~~-p~~~~~~~~~dvA~~v~~l~s~~~~~~ 231 (254)
T 1hdc_A 159 RGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ---GEG-NY--PNT-PMGRVGNEPGEIAGAVVKLLSDTSSYV 231 (254)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC---STT-SC--TTS-TTSSCB-CHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhH---HHH-HH--hcC-CCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence 9999988876 4899999999999887421100000 000 00 001 223477 9999999999998764 23
Q ss_pred Cc-eEEEeCC
Q 025065 183 SG-RYLLAGS 191 (258)
Q Consensus 183 ~~-~~~~~~~ 191 (258)
.| .+.+++.
T Consensus 232 tG~~~~vdgG 241 (254)
T 1hdc_A 232 TGAELAVDGG 241 (254)
T ss_dssp CSCEEEESTT
T ss_pred CCCEEEECCC
Confidence 56 4555543
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.9e-19 Score=144.26 Aligned_cols=180 Identities=16% Similarity=0.099 Sum_probs=125.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc--CCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++... ..++.++.+|+++++++.++++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEA-SKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999987643211 11111111 2468899999999998888775
Q ss_pred --CCcEEEecCCCCCC-CC---CCch-----------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPVIF-LS---DNPQ-----------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~~~-~~---~~~~-----------------------------------------------~~Y~~sK 105 (258)
++|+|||+||.... .. .... ..|+.+|
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 169 (267)
T 1iy8_A 90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK 169 (267)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHH
Confidence 68999999997532 11 1111 5799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCC----CCcc-HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI----LNFG-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~----~~~~-~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
...+.+.+.++.+ +|+++++++||.++++..... .... ......+.... ....+.+++|+|++++.++
T Consensus 170 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~~~dvA~~v~~l~ 245 (267)
T 1iy8_A 170 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN----PSKRYGEAPEIAAVVAFLL 245 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC----CCCCCcCHHHHHHHHHHHc
Confidence 9999999888766 489999999999988742210 0111 11111222221 2335789999999999998
Q ss_pred cCC--CCCc-eEEEeC
Q 025065 178 EVP--KASG-RYLLAG 190 (258)
Q Consensus 178 ~~~--~~~~-~~~~~~ 190 (258)
..+ ...| .+.++|
T Consensus 246 s~~~~~~tG~~i~vdG 261 (267)
T 1iy8_A 246 SDDASYVNATVVPIDG 261 (267)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CccccCCCCCEEEECC
Confidence 754 2456 445554
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=141.38 Aligned_cols=163 Identities=18% Similarity=0.110 Sum_probs=120.1
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
||+. ++|++|||||+|+||++++++|.++|++|++++|+.. +|++|++++.++++
T Consensus 1 M~~~--~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~ 57 (223)
T 3uce_A 1 MMGS--DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------LDISDEKSVYHYFETI 57 (223)
T ss_dssp ------CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------CCTTCHHHHHHHHHHH
T ss_pred CCCC--CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------cCCCCHHHHHHHHHHh
Confidence 5543 6789999999999999999999999999999988641 79999998888775
Q ss_pred -CCcEEEecCCCCCC-C---CCCch---------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIF-L---SDNPQ---------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~-~---~~~~~---------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||.... . ..... ..|+.+|...
T Consensus 58 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~ 137 (223)
T 3uce_A 58 GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAI 137 (223)
T ss_dssp CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHH
Confidence 68999999997522 1 11111 6799999999
Q ss_pred HHHHHHHHHHcC-CcEEEEcCCccccCCcCCCCCcc-HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-e
Q 025065 109 EEAAWKFAKENG-IDLVAIHPGTVIGPFFQPILNFG-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-R 185 (258)
Q Consensus 109 e~~~~~~~~~~~-~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~ 185 (258)
+.+.+.++.+.+ +++..++||.+.++......... ........... ....+.+++|+|++++.++......| .
T Consensus 138 ~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dvA~~~~~l~~~~~~tG~~ 213 (223)
T 3uce_A 138 EATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHL----PVGKVGEASDIAMAYLFAIQNSYMTGTV 213 (223)
T ss_dssp HHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHS----TTCSCBCHHHHHHHHHHHHHCTTCCSCE
T ss_pred HHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcC----CCCCccCHHHHHHHHHHHccCCCCCCcE
Confidence 999999988864 99999999999987544321111 11122222222 34468899999999999998766677 4
Q ss_pred EEEeC
Q 025065 186 YLLAG 190 (258)
Q Consensus 186 ~~~~~ 190 (258)
+.+++
T Consensus 214 i~vdg 218 (223)
T 3uce_A 214 IDVDG 218 (223)
T ss_dssp EEEST
T ss_pred EEecC
Confidence 55554
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=7.9e-19 Score=141.89 Aligned_cols=183 Identities=17% Similarity=0.161 Sum_probs=126.4
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++ .++.++++|++|++++.++++
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA-LEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3567899999999999999999999999999999987533211 11111 247899999999998887765
Q ss_pred -CCcEEEecCCCCCC-CC---CCch----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIF-LS---DNPQ----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~-~~---~~~~----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||.... .. .... ..|+.+|..
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 160 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGA 160 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHHH
Confidence 68999999997532 11 1111 579999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCC---CCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP---ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
.+.+++.++.+ +|++++++|||.++++.... ........+....... ....+..++|+|++++.++...
T Consensus 161 ~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dva~~v~~L~s~~~ 236 (270)
T 1yde_A 161 VTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ----PLGRMGQPAEVGAAAVFLASEAN 236 (270)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS----TTSSCBCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcC----CCCCCcCHHHHHHHHHHHcccCC
Confidence 99999988866 58999999999999874211 0011111111111111 2234679999999999988653
Q ss_pred CCCc-eEEEe-CCCcCHH
Q 025065 181 KASG-RYLLA-GSVAQHS 196 (258)
Q Consensus 181 ~~~~-~~~~~-~~~~t~~ 196 (258)
...| .+.++ |......
T Consensus 237 ~itG~~i~vdGG~~~~~~ 254 (270)
T 1yde_A 237 FCTGIELLVTGGAELGYG 254 (270)
T ss_dssp TCCSCEEEESTTTTSCC-
T ss_pred CcCCCEEEECCCeecccC
Confidence 3456 55555 4444443
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-18 Score=140.14 Aligned_cols=187 Identities=20% Similarity=0.133 Sum_probs=129.3
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCcc-----------c----hhhccccCcCCcEEEEEcc
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-----------T----EHLRELDGATERLHLFKAN 66 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~----~~~~~~~~~~~~~~~~~~D 66 (258)
|...+++|++|||||+|+||++++++|+++|++|++++|+.+... . .....+...+.++.++++|
T Consensus 5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 84 (286)
T 3uve_A 5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD 84 (286)
T ss_dssp -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC
Confidence 334467899999999999999999999999999999998743211 1 1111222234578999999
Q ss_pred CCCcccHHHHhC-------CCcEEEecCCCCCCCC----CCch-------------------------------------
Q 025065 67 LLEEGSFDSAVD-------GCDGVFHTASPVIFLS----DNPQ------------------------------------- 98 (258)
Q Consensus 67 l~~~~~~~~~~~-------~~d~Vih~a~~~~~~~----~~~~------------------------------------- 98 (258)
+++++++.++++ ++|++||+||...... ....
T Consensus 85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is 164 (286)
T 3uve_A 85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS 164 (286)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence 999998887765 6899999999854321 1111
Q ss_pred -----------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC----------CccHHHHHHHHcCC
Q 025065 99 -----------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL----------NFGAEVILNLINGD 154 (258)
Q Consensus 99 -----------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~----------~~~~~~~~~~~~g~ 154 (258)
..|+.+|...+.+.+.++.+ +|+++..++||.|.++...... .....-......-.
T Consensus 165 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (286)
T 3uve_A 165 SVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF 244 (286)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTT
T ss_pred chhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhh
Confidence 67999999999999998876 5899999999999987533210 00010111110000
Q ss_pred CCCCCCcceeeHHHHHHHHHHhhcCC--CCCc-eEEEeC
Q 025065 155 QSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAG 190 (258)
Q Consensus 155 ~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 190 (258)
... . ..+.+++|+|++++.++... ...| .+.++|
T Consensus 245 ~~~-p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG 281 (286)
T 3uve_A 245 HTL-P-IPWVEPIDISNAVLFFASDEARYITGVTLPIDA 281 (286)
T ss_dssp CSS-S-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hcc-C-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence 011 2 56889999999999999754 3456 455554
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-18 Score=141.57 Aligned_cols=183 Identities=19% Similarity=0.154 Sum_probs=127.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCcc-------c----hhhccccCcCCcEEEEEccCCCcccHH
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-------T----EHLRELDGATERLHLFKANLLEEGSFD 74 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 74 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..... . .....+.....++.++++|+++++++.
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 46799999999999999999999999999999998743211 0 111111122457899999999999888
Q ss_pred HHhC-------CCcEEEecCCCCCCCCC-Cch------------------------------------------------
Q 025065 75 SAVD-------GCDGVFHTASPVIFLSD-NPQ------------------------------------------------ 98 (258)
Q Consensus 75 ~~~~-------~~d~Vih~a~~~~~~~~-~~~------------------------------------------------ 98 (258)
++++ ++|+|||+||....... ...
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~ 167 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGA 167 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC--
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccc
Confidence 7765 79999999998643211 111
Q ss_pred --------hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCC-----------CccHHHHHHHHcCCCC
Q 025065 99 --------EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPIL-----------NFGAEVILNLINGDQS 156 (258)
Q Consensus 99 --------~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-----------~~~~~~~~~~~~g~~~ 156 (258)
..|+.+|...+.+++.++.+. |+++..++||.|.++...... ............. ..
T Consensus 168 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 246 (287)
T 3pxx_A 168 GGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAM-QA 246 (287)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGG-CS
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhh-cc
Confidence 259999999999999988775 899999999999987543210 0000000000000 00
Q ss_pred CCCCcceeeHHHHHHHHHHhhcCC--CCCc-eEEEeCC
Q 025065 157 FAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 157 ~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 191 (258)
....+.+++|+|++++.++... ...| .+.++|.
T Consensus 247 --~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG 282 (287)
T 3pxx_A 247 --MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282 (287)
T ss_dssp --SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --cCCCCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence 1256899999999999999653 3456 5555543
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-19 Score=142.27 Aligned_cols=157 Identities=11% Similarity=0.127 Sum_probs=118.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-------EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
+|+||||||+|+||++++++|+++|+ +|++++|+...... ...++.....++.++.+|+++++++.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEK-ISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHH-HHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHH-HHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 57899999999999999999999999 99999987533211 111121223568999999999998887775
Q ss_pred -----CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHH
Q 025065 79 -----GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~ 103 (258)
++|+|||+||...... .... +.|+.
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~ 160 (244)
T 2bd0_A 81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM 160 (244)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHH
Confidence 6999999999854321 1111 67999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+++.++.+ +|++++++|||.++++........ ....+++++|+|++++.++..+
T Consensus 161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------------~~~~~~~~~dva~~~~~l~~~~ 224 (244)
T 2bd0_A 161 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE----------------MQALMMMPEDIAAPVVQAYLQP 224 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST----------------TGGGSBCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcccc----------------ccccCCCHHHHHHHHHHHHhCC
Confidence 999999999887754 589999999999999864321100 0124789999999999999875
Q ss_pred C
Q 025065 181 K 181 (258)
Q Consensus 181 ~ 181 (258)
.
T Consensus 225 ~ 225 (244)
T 2bd0_A 225 S 225 (244)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=145.68 Aligned_cols=181 Identities=18% Similarity=0.106 Sum_probs=126.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|+++++++.++++
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRT-TLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999997643211 111121113468899999999998887765
Q ss_pred CCcEEEecCCCCCCCC---CCch-------------------------------------------------hhHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-------------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||...... .... ..|+.+|.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 178 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH 178 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHH
Confidence 6899999999753211 0000 57999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC---c-----cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN---F-----GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~---~-----~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
..+.+++.++.+ .|+++++++||.++++....... . .......+.... ....+++++|+|++++.
T Consensus 179 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~~~dvA~~v~~ 254 (277)
T 2rhc_B 179 GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV----PIGRYVQPSEVAEMVAY 254 (277)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHS----TTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcC----CCCCCcCHHHHHHHHHH
Confidence 999999988876 47999999999998874221000 0 001111111111 33468999999999999
Q ss_pred hhcCCC--CCc-eEEEeCC
Q 025065 176 ALEVPK--ASG-RYLLAGS 191 (258)
Q Consensus 176 ~~~~~~--~~~-~~~~~~~ 191 (258)
++..+. ..| .+.+++.
T Consensus 255 l~s~~~~~~tG~~~~vdGG 273 (277)
T 2rhc_B 255 LIGPGAAAVTAQALNVCGG 273 (277)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhCchhcCCCCcEEEECCC
Confidence 987642 355 5566554
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.9e-19 Score=142.83 Aligned_cols=184 Identities=19% Similarity=0.085 Sum_probs=127.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|++|||||+|+||++++++|+++|++|++++|+..... +...++.....++.++++|++|++++.++++ +
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVE-EVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999998764322 1222222334578999999999988887765 6
Q ss_pred CcEEEecCCCCCC-C---CCCch-------------------------------------------------hhHHHHHH
Q 025065 80 CDGVFHTASPVIF-L---SDNPQ-------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 80 ~d~Vih~a~~~~~-~---~~~~~-------------------------------------------------~~Y~~sK~ 106 (258)
+|++||+||.... . ..... ..|+.+|.
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKa 185 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKA 185 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHH
Confidence 9999999998532 1 11111 56999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcCC-
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
..+.+++.++.+ +|+++..++||.|.++.................... ...| ....+..++|+|++++.++...
T Consensus 186 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a 265 (283)
T 3v8b_A 186 AQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERA 265 (283)
T ss_dssp HHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccc
Confidence 999999999887 479999999999988754332111110000000000 1111 1245789999999999998754
Q ss_pred -CCCc-eEEEeCC
Q 025065 181 -KASG-RYLLAGS 191 (258)
Q Consensus 181 -~~~~-~~~~~~~ 191 (258)
...| .+.++|.
T Consensus 266 ~~itG~~i~vdGG 278 (283)
T 3v8b_A 266 RHVTGSPVWIDGG 278 (283)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCCcCCEEEECcC
Confidence 3456 4455543
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=8.7e-19 Score=142.08 Aligned_cols=177 Identities=19% Similarity=0.183 Sum_probs=123.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEc-CCCCccchhhccccCc-CCcEEEEEccCCCc----ccHHHHhC-
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVR-DPNSPKTEHLRELDGA-TERLHLFKANLLEE----GSFDSAVD- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~----~~~~~~~~- 78 (258)
|++|++|||||+|+||++++++|+++|++|++++| +..... ....++... +.++.++.+|+++. +++.++++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQ-RLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHH-HHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence 56789999999999999999999999999999998 532211 111111111 24688999999999 87777765
Q ss_pred ------CCcEEEecCCCCCCC---CCCc----------------------------------------------h-----
Q 025065 79 ------GCDGVFHTASPVIFL---SDNP----------------------------------------------Q----- 98 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~~---~~~~----------------------------------------------~----- 98 (258)
++|+|||+||..... .... .
T Consensus 88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i 167 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL 167 (276)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence 689999999974321 1111 0
Q ss_pred ------------hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcce
Q 025065 99 ------------EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIF 163 (258)
Q Consensus 99 ------------~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (258)
..|+.+|...+.+++.++.+. |+++++++||.++++ .. . .......+.... |..+++
T Consensus 168 sS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~--~--~~~~~~~~~~~~---p~~r~~ 239 (276)
T 1mxh_A 168 CDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA--M--PQETQEEYRRKV---PLGQSE 239 (276)
T ss_dssp CCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS--S--CHHHHHHHHTTC---TTTSCC
T ss_pred CchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc--C--CHHHHHHHHhcC---CCCCCC
Confidence 579999999999999888764 899999999999998 21 1 122223332221 122338
Q ss_pred eeHHHHHHHHHHhhcCCC--CCc-eEEEeCC
Q 025065 164 VEIRDVVYAHIRALEVPK--ASG-RYLLAGS 191 (258)
Q Consensus 164 i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 191 (258)
.+++|+|++++.++..+. ..| .+.+++.
T Consensus 240 ~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 270 (276)
T 1mxh_A 240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGG 270 (276)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence 899999999999987532 356 5555543
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-19 Score=143.62 Aligned_cols=189 Identities=16% Similarity=0.088 Sum_probs=128.1
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
|+...+++|++|||||+|+||++++++|+++|++|++++|+...... ...++.. ...++.++++|+++++++.++++
T Consensus 1 M~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 79 (265)
T 3lf2_A 1 MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRA-AESALRQRFPGARLFASVCDVLDALQVRAFAE 79 (265)
T ss_dssp --CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHSTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHhcCCceEEEEeCCCCCHHHHHHHHH
Confidence 55556788999999999999999999999999999999987543221 1111111 12348999999999988887664
Q ss_pred -------CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhH
Q 025065 79 -------GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWY 101 (258)
Q Consensus 79 -------~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y 101 (258)
++|++||+||...... .... ..|
T Consensus 80 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 159 (265)
T 3lf2_A 80 ACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVAT 159 (265)
T ss_dssp HHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhh
Confidence 6899999999854321 1111 689
Q ss_pred HHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCC------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 102 SLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILN------FGAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
+.+|...+.+++.++.+. |+++..++||.|.++....... .....+.......... ....+..++|+|++
T Consensus 160 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~pedvA~~ 238 (265)
T 3lf2_A 160 SAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQI-PLGRLGKPIEAARA 238 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTC-TTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCC-CcCCCcCHHHHHHH
Confidence 999999999999988764 8999999999998763211000 0111111111110001 23457899999999
Q ss_pred HHHhhcCC--CCCc-eEEEeCC
Q 025065 173 HIRALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 173 ~~~~~~~~--~~~~-~~~~~~~ 191 (258)
++.++... ...| .+.++|.
T Consensus 239 v~fL~s~~~~~itG~~i~vdGG 260 (265)
T 3lf2_A 239 ILFLASPLSAYTTGSHIDVSGG 260 (265)
T ss_dssp HHHHHSGGGTTCCSEEEEESSS
T ss_pred HHHHhCchhcCcCCCEEEECCC
Confidence 99999753 3466 4455543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.3e-20 Score=148.02 Aligned_cols=180 Identities=16% Similarity=0.111 Sum_probs=128.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+... ....++.....++.++++|+++++++.++++
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVA-QTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHH-HHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 56899999999999999999999999999999988754322 1122222224578999999999999888775
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~ 182 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGI 182 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHH
Confidence 6899999999854321 1111 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KAS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 183 (258)
+.+++.++.+ +|+++..++||.|.++...... ............. ....+..++|+|++++.++... ...
T Consensus 183 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----p~~r~~~pedva~~v~~L~s~~~~~it 257 (271)
T 4ibo_A 183 KMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI-DNPEFDAWVKART----PAKRWGKPQELVGTAVFLSASASDYVN 257 (271)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-HCHHHHHHHHHHS----TTCSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc-cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCCC
Confidence 9999998876 5899999999999887432110 0111222222221 3345789999999999988754 245
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.+++.
T Consensus 258 G~~i~vdGG 266 (271)
T 4ibo_A 258 GQIIYVDGG 266 (271)
T ss_dssp SCEEEESTT
T ss_pred CcEEEECCC
Confidence 6 5555543
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.4e-19 Score=141.55 Aligned_cols=176 Identities=17% Similarity=0.090 Sum_probs=126.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++ ..++.++++|++|++++.++++
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKA-AAASI---GKKARAIAADISDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 578999999999999999999999999999999887543221 11111 3578999999999998888775
Q ss_pred CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||....... ... ..|+.+|..
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 159 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGG 159 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHH
Confidence 68999999998643211 111 679999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KA 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 182 (258)
.+.+.+.++.+ +|+++..++||.|.++............+..... ....+..++|+|+++..++... ..
T Consensus 160 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~------~~~r~~~pedva~~v~~L~s~~~~~i 233 (247)
T 3rwb_A 160 VIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQ------AMKGKGQPEHIADVVSFLASDDARWI 233 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHS------SSCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhccc------ccCCCcCHHHHHHHHHHHhCccccCC
Confidence 99999998877 5899999999999876432211111111111111 2334678999999999998764 24
Q ss_pred Cc-eEEEeCC
Q 025065 183 SG-RYLLAGS 191 (258)
Q Consensus 183 ~~-~~~~~~~ 191 (258)
.| .+.++|.
T Consensus 234 tG~~i~vdGG 243 (247)
T 3rwb_A 234 TGQTLNVDAG 243 (247)
T ss_dssp CSCEEEESTT
T ss_pred CCCEEEECCC
Confidence 56 4455543
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=148.66 Aligned_cols=192 Identities=15% Similarity=0.111 Sum_probs=130.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCC---cEEEEEccCCCcccHHHHhC----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE---RLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++..... ++.++.+|+++++++.++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEE-TKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999997543211 1111111112 68899999999998887765
Q ss_pred ---CCcEEEecCCCCCCCC-----CCch-----------------------------------------------hhHHH
Q 025065 79 ---GCDGVFHTASPVIFLS-----DNPQ-----------------------------------------------EWYSL 103 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~-----~~~~-----------------------------------------------~~Y~~ 103 (258)
++|+|||+||...... .... ..|+.
T Consensus 103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~Y~a 182 (297)
T 1xhl_A 103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC 182 (297)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcchHHH
Confidence 6899999999753321 0100 46999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC-Ccc-----HHHHHHHHcCCCCCCCCcceeeHHHHHHHHH
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL-NFG-----AEVILNLINGDQSFAFPYIFVEIRDVVYAHI 174 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-~~~-----~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~ 174 (258)
+|...+.+.+.++.+ +|+++++++||.|.++...... ... .......... . ....+..++|+|++++
T Consensus 183 sKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---~-p~~r~~~pedvA~~v~ 258 (297)
T 1xhl_A 183 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC---I-PVGHCGKPEEIANIIV 258 (297)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT---C-TTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhc---C-CCCCCcCHHHHHHHHH
Confidence 999999999888765 5899999999999987432110 000 0011111111 1 2345889999999999
Q ss_pred HhhcCC---CCCc-eEEEeC-CCcCHHHHHHHH
Q 025065 175 RALEVP---KASG-RYLLAG-SVAQHSDILKFL 202 (258)
Q Consensus 175 ~~~~~~---~~~~-~~~~~~-~~~t~~e~~~~i 202 (258)
.++..+ ...| .+.+++ ......+.+..+
T Consensus 259 ~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~ 291 (297)
T 1xhl_A 259 FLADRNLSSYIIGQSIVADGGSTLVMGMQTHDL 291 (297)
T ss_dssp HHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCH
T ss_pred HHhCCcccCCccCcEEEECCCccccccccccch
Confidence 998754 3456 555554 344544443333
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=139.82 Aligned_cols=181 Identities=20% Similarity=0.119 Sum_probs=127.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++++......+...++.....++.++.+|+++.+++.++++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 84 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence 4678999999999999999999999999999876554433222222232234578899999999988777654
Q ss_pred ------CCcEEEecCCCCCCCCC---Cch---------------------------------------------hhHHHH
Q 025065 79 ------GCDGVFHTASPVIFLSD---NPQ---------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~~~~---~~~---------------------------------------------~~Y~~s 104 (258)
.+|+|||+||....... ... ..|+.+
T Consensus 85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as 164 (255)
T 3icc_A 85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMT 164 (255)
T ss_dssp HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHh
Confidence 28999999998533211 111 679999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
|.+.+.+++.++.+ .|+++..++||.+.++....... ............ ....+..++|+|+++..++...
T Consensus 165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~~~ 239 (255)
T 3icc_A 165 KGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS-DPMMKQYATTIS----AFNRLGEVEDIADTAAFLASPDS 239 (255)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT-SHHHHHHHHHTS----TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc-cHHHHHhhhccC----CcCCCCCHHHHHHHHHHHhCccc
Confidence 99999999988876 48999999999998875443221 111112212211 3345789999999999988653
Q ss_pred -CCCc-eEEEeCC
Q 025065 181 -KASG-RYLLAGS 191 (258)
Q Consensus 181 -~~~~-~~~~~~~ 191 (258)
...| .+.+++.
T Consensus 240 ~~~tG~~i~vdgG 252 (255)
T 3icc_A 240 RWVTGQLIDVSGG 252 (255)
T ss_dssp TTCCSCEEEESSS
T ss_pred CCccCCEEEecCC
Confidence 3456 4555543
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.1e-19 Score=141.94 Aligned_cols=188 Identities=14% Similarity=0.129 Sum_probs=129.5
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC-
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
|.+.+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.. ....+.++.+|+++++.+.++++
T Consensus 4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (267)
T 3t4x_A 4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNE-TIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK 82 (267)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh
Confidence 4555678999999999999999999999999999999987643221 1111111 12457889999999998888775
Q ss_pred --CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~ 106 (258)
++|++||+||....... ... ..|+.+|.
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 162 (267)
T 3t4x_A 83 YPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKT 162 (267)
T ss_dssp CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHH
Confidence 68999999998643211 111 67999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCC-------CCC-ccHHHHHHHHcCC-CCCCCCcceeeHHHHHHHHH
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQP-------ILN-FGAEVILNLINGD-QSFAFPYIFVEIRDVVYAHI 174 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~-------~~~-~~~~~~~~~~~g~-~~~~~~~~~i~v~D~a~~~~ 174 (258)
..+.+.+.++.+. |+++..++||.+.++.... ... ............. +.. ....+.+++|+|++++
T Consensus 163 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~pedvA~~v~ 241 (267)
T 3t4x_A 163 MQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTS-IIQRLIRPEEIAHLVT 241 (267)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTC-SSCSCBCTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcc-cccCccCHHHHHHHHH
Confidence 9999999998774 6999999999998763110 000 0111111111111 111 2456899999999999
Q ss_pred HhhcCC--CCCc-eEEEeCC
Q 025065 175 RALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 175 ~~~~~~--~~~~-~~~~~~~ 191 (258)
.++... ...| .+.++|.
T Consensus 242 fL~s~~~~~itG~~i~vdGG 261 (267)
T 3t4x_A 242 FLSSPLSSAINGSALRIDGG 261 (267)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHcCccccCccCCeEEECCC
Confidence 998753 3456 5565543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=144.23 Aligned_cols=165 Identities=17% Similarity=0.149 Sum_probs=120.1
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC-
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
|+..+++|++|||||+|+||++++++|+++|++|++++|+...... ..+........++.++.+|+++.+++.++++
T Consensus 1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (250)
T 3nyw_A 1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD 80 (250)
T ss_dssp ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence 4555678999999999999999999999999999999997643321 1111111112568899999999988887764
Q ss_pred ------CCcEEEecCCCCCCCCCCch-------------------------------------------------hhHHH
Q 025065 79 ------GCDGVFHTASPVIFLSDNPQ-------------------------------------------------EWYSL 103 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~~~~~~~-------------------------------------------------~~Y~~ 103 (258)
++|++||+||.......+.. ..|+.
T Consensus 81 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 160 (250)
T 3nyw_A 81 IHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGS 160 (250)
T ss_dssp HHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHH
Confidence 58999999998543221111 57999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|...+.+++.++.+ .|+++..++||.|.++.. ...... . ....++.++|+|++++.++..+
T Consensus 161 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~-----------~~~~~~---~-~~~~~~~p~dva~~v~~l~s~~ 225 (250)
T 3nyw_A 161 TKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA-----------KKAGTP---F-KDEEMIQPDDLLNTIRCLLNLS 225 (250)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH-----------HHTTCC---S-CGGGSBCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh-----------hhcCCC---c-ccccCCCHHHHHHHHHHHHcCC
Confidence 999999999988876 389999999999976421 111111 1 2345789999999999999876
Q ss_pred C
Q 025065 181 K 181 (258)
Q Consensus 181 ~ 181 (258)
.
T Consensus 226 ~ 226 (250)
T 3nyw_A 226 E 226 (250)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=149.35 Aligned_cols=192 Identities=16% Similarity=0.098 Sum_probs=135.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC---------CccchhhccccCcCCcEEEEEccCCCcccHHHH
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN---------SPKTEHLRELDGATERLHLFKANLLEEGSFDSA 76 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.. ........++.....++.++.+|++|++++.++
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 56789999999999999999999999999999988621 111111222222245788999999999988877
Q ss_pred hC-------CCcEEEecCCCCCCCC---CCch------------------------------------------------
Q 025065 77 VD-------GCDGVFHTASPVIFLS---DNPQ------------------------------------------------ 98 (258)
Q Consensus 77 ~~-------~~d~Vih~a~~~~~~~---~~~~------------------------------------------------ 98 (258)
++ ++|+|||+||...... ....
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence 75 7899999999864321 1111
Q ss_pred -----hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHH
Q 025065 99 -----EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVV 170 (258)
Q Consensus 99 -----~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a 170 (258)
..|+.+|...+.+++.++.+ +|+++..++|| +..+......... ... .. ..+.++.++|+|
T Consensus 185 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~---~~~---~~----~~~~~~~pedva 253 (322)
T 3qlj_A 185 GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEM---MAT---QD----QDFDAMAPENVS 253 (322)
T ss_dssp CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------------CCTTCGGGTH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhh---hhc---cc----cccCCCCHHHHH
Confidence 57999999999999998877 58999999999 6655332211110 000 00 334567899999
Q ss_pred HHHHHhhcCCC--CCc-eEEEeC-C-----------------CcCHHHHHHHHHHhCCC
Q 025065 171 YAHIRALEVPK--ASG-RYLLAG-S-----------------VAQHSDILKFLREHYPT 208 (258)
Q Consensus 171 ~~~~~~~~~~~--~~~-~~~~~~-~-----------------~~t~~e~~~~i~~~~~~ 208 (258)
.+++.++.... ..| .+.+++ . .+++.|+++.+.+.++.
T Consensus 254 ~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~ 312 (322)
T 3qlj_A 254 PLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGK 312 (322)
T ss_dssp HHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhc
Confidence 99999986543 345 444443 2 34789999999998763
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=148.62 Aligned_cols=180 Identities=13% Similarity=0.046 Sum_probs=125.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchh-hccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEH-LRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|++|||||+|+||++++++|+++|++|++.+|+......+. ...+.....++.++.+|+++.+++.++++
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999888643221111 11111224578999999999988877664
Q ss_pred -CCcEEEecCCCCCCCC----CCch---------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS----DNPQ---------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~----~~~~---------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||...... .... ..|+.+|...
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~ 206 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAI 206 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHHHH
Confidence 6899999999753211 1111 6799999999
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCC
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KAS 183 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 183 (258)
+.+++.++.+. |+++.+++||.|+++........ ......+... . ....+..++|+|++++.++... ...
T Consensus 207 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~---~-p~~r~~~p~dvA~~v~~L~s~~~~~it 281 (294)
T 3r3s_A 207 LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT-QDKIPQFGQQ---T-PMKRAGQPAELAPVYVYLASQESSYVT 281 (294)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC-GGGSTTTTTT---S-TTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC-HHHHHHHHhc---C-CCCCCcCHHHHHHHHHHHhCccccCCC
Confidence 99999988774 89999999999998742111000 0000010111 0 3445789999999999998754 245
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| ++.++|
T Consensus 282 G~~i~vdG 289 (294)
T 3r3s_A 282 AEVHGVCG 289 (294)
T ss_dssp SCEEEEST
T ss_pred CCEEEECC
Confidence 6 555554
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-19 Score=147.49 Aligned_cols=175 Identities=16% Similarity=0.139 Sum_probs=114.3
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc--CcCCcEEEEEccCCCcccHHHHhC----
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
.+++++||||||+|+||++++++|+++|++|++++|+...... ....+. .....+.++.+|+++++++.++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDK-ALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999998644321 111111 112378999999999998888765
Q ss_pred ---CCcEEEecCCCCCCCC---CCch-----------------------------------------------------h
Q 025065 79 ---GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------------E 99 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------------~ 99 (258)
++|+|||+||...... .... .
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~ 163 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPG 163 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCH
Confidence 5799999999753221 0100 5
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC----CCcceeeHHHHH
Q 025065 100 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA----FPYIFVEIRDVV 170 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~----~~~~~i~v~D~a 170 (258)
.|+.||.+.+.+.+.++.+ .|+++++++||.|.++........ ...+....... .... .....+.++|+|
T Consensus 164 ~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA 242 (319)
T 3ioy_A 164 IYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIR-PDALKGEVKPVDKTAVERLAGVHEFGMEPDVIG 242 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------------------------CCGGGSSBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccC-chhhcccccchhHHHHHHHHHhhhcCCCHHHHH
Confidence 7999999888777776654 489999999999988754322110 00010000000 0011 111237999999
Q ss_pred HHHHHhhcCCC
Q 025065 171 YAHIRALEVPK 181 (258)
Q Consensus 171 ~~~~~~~~~~~ 181 (258)
++++.+++++.
T Consensus 243 ~~~~~al~~~~ 253 (319)
T 3ioy_A 243 ARVIEAMKANR 253 (319)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 99999998853
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=145.56 Aligned_cols=158 Identities=13% Similarity=0.046 Sum_probs=119.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+||||||+|+||++++++|+++|++|++++|+...... ...++.....++.++.+|+++++++.++++
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEE-TAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHH-HHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 567899999999999999999999999999999987533211 111111113478999999999998887765
Q ss_pred CCcEEEecCCCCCCCCCCch--------------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||.......... ..|+.+|...
T Consensus 108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 187 (272)
T 1yb1_A 108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA 187 (272)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHH
Confidence 68999999998543211110 5799999999
Q ss_pred HHHHHHHHHHc------CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 109 EEAAWKFAKEN------GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 109 e~~~~~~~~~~------~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.+++.++.+. |++++++|||.+.++.... . .. ....+++++|+|++++.++.++.
T Consensus 188 ~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~---~----~~----------~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 188 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---P----ST----------SLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---T----HH----------HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc---c----cc----------cccCCCCHHHHHHHHHHHHHcCC
Confidence 99999887764 8999999999998875221 0 00 11247899999999999998754
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-19 Score=141.19 Aligned_cols=158 Identities=16% Similarity=0.096 Sum_probs=119.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|++|||||+|+||++++++|+++|++|++++|+..+.. ...+.+|++|.+++.++++ +
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~d~~d~~~v~~~~~~~~~~~g~ 87 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------------DHSFTIKDSGEEEIKSVIEKINSKSIK 87 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------------SEEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------ccceEEEeCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999875532 1356789999988887764 4
Q ss_pred CcEEEecCCCCCCCC--CCc-h----------------------------------------------hhHHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS--DNP-Q----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~--~~~-~----------------------------------------------~~Y~~sK~~~e~ 110 (258)
+|+|||+||...... ... . ..|+.+|.+.+.
T Consensus 88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 167 (251)
T 3orf_A 88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHH 167 (251)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHH
Confidence 699999999753321 111 1 679999999999
Q ss_pred HHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC---CCC
Q 025065 111 AAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV---PKA 182 (258)
Q Consensus 111 ~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~ 182 (258)
+++.++.+ .++++.+++||.|.++. ........ ....+++++|+|++++.++.. ...
T Consensus 168 ~~~~la~e~~~~~~gi~v~~v~PG~v~t~~-----------~~~~~~~~----~~~~~~~~~dva~~i~~l~~~~~~~~~ 232 (251)
T 3orf_A 168 IIKDLASENGGLPAGSTSLGILPVTLDTPT-----------NRKYMSDA----NFDDWTPLSEVAEKLFEWSTNSDSRPT 232 (251)
T ss_dssp HHHHHTSTTSSSCTTCEEEEEEESCBCCHH-----------HHHHCTTS----CGGGSBCHHHHHHHHHHHHHCGGGCCC
T ss_pred HHHHHHHHhcccCCCcEEEEEecCcCcCcc-----------hhhhcccc----cccccCCHHHHHHHHHHHhcCccccCC
Confidence 99998877 57999999999997653 11211111 344688999999999999988 344
Q ss_pred Cc-eE-EEeCCC
Q 025065 183 SG-RY-LLAGSV 192 (258)
Q Consensus 183 ~~-~~-~~~~~~ 192 (258)
.| .+ +.+++.
T Consensus 233 tG~~i~v~~g~~ 244 (251)
T 3orf_A 233 NGSLVKFETKSK 244 (251)
T ss_dssp TTCEEEEEEETT
T ss_pred cceEEEEecCCc
Confidence 56 44 444443
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-18 Score=138.21 Aligned_cols=168 Identities=15% Similarity=0.088 Sum_probs=120.8
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+...... +..+.+|+++++++.++++
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------LFGVEVDVTDSDAVDRAFTAVEEHQ 79 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------------SEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH------------hcCeeccCCCHHHHHHHHHHHHHHc
Confidence 3567899999999999999999999999999999997644311 1237899999988887764
Q ss_pred -CCcEEEecCCCCCCC---CCCch-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFL---SDNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~---~~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||..... ..... ..|+.+|..
T Consensus 80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 159 (247)
T 1uzm_A 80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAG 159 (247)
T ss_dssp SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHH
Confidence 589999999985421 11111 579999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KA 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 182 (258)
.+.+.+.++.+ +|+++++++||.+.++..... ............ ....+.+++|+|++++.++..+ ..
T Consensus 160 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~----p~~~~~~~~dvA~~~~~l~s~~~~~~ 232 (247)
T 1uzm_A 160 VIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQFI----PAKRVGTPAEVAGVVSFLASEDASYI 232 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGC----TTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc---CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCccccCC
Confidence 99999888776 489999999999987642211 111111211111 2335889999999999998753 23
Q ss_pred Cc-eEEEeCC
Q 025065 183 SG-RYLLAGS 191 (258)
Q Consensus 183 ~~-~~~~~~~ 191 (258)
.| .+.+++.
T Consensus 233 ~G~~i~vdgG 242 (247)
T 1uzm_A 233 SGAVIPVDGG 242 (247)
T ss_dssp CSCEEEESTT
T ss_pred cCCEEEECCC
Confidence 56 4555543
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.80 E-value=8e-19 Score=143.40 Aligned_cols=173 Identities=17% Similarity=0.114 Sum_probs=121.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~ 82 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... .... ...++.++++|+++.+++.++++ ++|+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEA-AART---MAGQVEVRELDLQDLSSVRRFADGVSGADV 89 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHTT---SSSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHH---hcCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 467999999999999999999999999999999997643221 1111 13578999999999999999887 5799
Q ss_pred EEecCCCCCCC----CCCch-----------------------------------------------------hhHHHHH
Q 025065 83 VFHTASPVIFL----SDNPQ-----------------------------------------------------EWYSLAK 105 (258)
Q Consensus 83 Vih~a~~~~~~----~~~~~-----------------------------------------------------~~Y~~sK 105 (258)
|||+||..... ..... ..|+.||
T Consensus 90 lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 169 (291)
T 3rd5_A 90 LINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSK 169 (291)
T ss_dssp EEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHH
T ss_pred EEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHH
Confidence 99999985422 11111 2599999
Q ss_pred HHHHHHHHHHHHHc---C--CcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 106 TLAEEAAWKFAKEN---G--IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~~---~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+.+.+++.++.+. | +++..++||.|.++......... ...... .+..+-...++|+|++++.++..+
T Consensus 170 ~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~A~~~~~l~~~~ 242 (291)
T 3rd5_A 170 LANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL----GDALMS---AATRVVATDADFGARQTLYAASQD 242 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------------CHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH----HHHHHH---HHHHHHhCCHHHHHHHHHHHHcCC
Confidence 99999998887664 5 99999999999877533221111 010000 001222346999999999999987
Q ss_pred CCCceE-EEe
Q 025065 181 KASGRY-LLA 189 (258)
Q Consensus 181 ~~~~~~-~~~ 189 (258)
...|.| ...
T Consensus 243 ~~~G~~~~vd 252 (291)
T 3rd5_A 243 LPGDSFVGPR 252 (291)
T ss_dssp CCTTCEEEET
T ss_pred CCCCceeCCc
Confidence 677755 443
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-19 Score=145.05 Aligned_cols=181 Identities=16% Similarity=0.117 Sum_probs=126.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCC---cEEEEEccCCCcccHHHHhC----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE---RLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ...++..... ++.++.+|+++++++.++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEE-TRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999987643221 1111111122 68999999999998887765
Q ss_pred ---CCcEEEecCCCCCCCC-------CCch-----------------------------------------------hhH
Q 025065 79 ---GCDGVFHTASPVIFLS-------DNPQ-----------------------------------------------EWY 101 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~-------~~~~-----------------------------------------------~~Y 101 (258)
++|+|||+||...... .... ..|
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y 162 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY 162 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCcccHH
Confidence 6899999999754321 0110 469
Q ss_pred HHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC-Ccc-----HHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 102 SLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL-NFG-----AEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-~~~-----~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
+.+|...+.+++.++.+ +|+++++++||.++++...... ... .......... . ....+.+++|+|++
T Consensus 163 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~-p~~~~~~pedvA~~ 238 (280)
T 1xkq_A 163 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC---I-PIGAAGKPEHIANI 238 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT---C-TTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC---C-CCCCCCCHHHHHHH
Confidence 99999999999888765 5899999999999988532210 000 0111111111 1 23458899999999
Q ss_pred HHHhhcCC---CCCc-eEEEeCC
Q 025065 173 HIRALEVP---KASG-RYLLAGS 191 (258)
Q Consensus 173 ~~~~~~~~---~~~~-~~~~~~~ 191 (258)
++.++..+ ...| .+.+++.
T Consensus 239 v~~l~s~~~~~~~tG~~i~vdgG 261 (280)
T 1xkq_A 239 ILFLADRNLSFYILGQSIVADGG 261 (280)
T ss_dssp HHHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHhcCcccccCccCCeEEECCC
Confidence 99998754 3456 4555543
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=144.76 Aligned_cols=182 Identities=19% Similarity=0.110 Sum_probs=126.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...........+.....++.++.+|+++.+++.++++
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999875432111111222223568899999999988877654
Q ss_pred CCcEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+||...... .... ..|+.+|...+
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~ 186 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIE 186 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHHHH
Confidence 6899999999854321 1111 46999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCC-------C-CccHHHHHHHHc--CCCCCCCCcceeeHHHHHHHHHHh
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI-------L-NFGAEVILNLIN--GDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~-------~-~~~~~~~~~~~~--g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.+++.++.+ +|+++++++||.|.++..... . .........+.. .. ....+.+++|+|++++.+
T Consensus 187 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v~~l 262 (283)
T 1g0o_A 187 TFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS----PLRRVGLPIDIARVVCFL 262 (283)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC----TTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCC----CCCCCcCHHHHHHHHHHH
Confidence 999988865 489999999999988632110 0 001112222222 21 233478999999999999
Q ss_pred hcCCC--CCc-eEEEeCC
Q 025065 177 LEVPK--ASG-RYLLAGS 191 (258)
Q Consensus 177 ~~~~~--~~~-~~~~~~~ 191 (258)
+.... ..| .+.++|.
T Consensus 263 ~s~~~~~itG~~i~vdgG 280 (283)
T 1g0o_A 263 ASNDGGWVTGKVIGIDGG 280 (283)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred hCccccCcCCCEEEeCCC
Confidence 97542 456 4455543
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.2e-19 Score=140.89 Aligned_cols=169 Identities=22% Similarity=0.197 Sum_probs=123.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHH-CCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~ 80 (258)
++|++|||||+|+||++++++|++ .|+.|++.+|+.... ...+.++++|+++++++.++++ ++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~i 71 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----------AENLKFIKADLTKQQDITNVLDIIKNVSF 71 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----------CTTEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----------cccceEEecCcCCHHHHHHHHHHHHhCCC
Confidence 478999999999999999999998 789999998876422 1357899999999999988775 68
Q ss_pred cEEEecCCCCCCCC---CCch---------------------------------------------hhHHHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS---DNPQ---------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 81 d~Vih~a~~~~~~~---~~~~---------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
|++||+||...... .... ..|+.+|...+.++
T Consensus 72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~ 151 (244)
T 4e4y_A 72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMT 151 (244)
T ss_dssp EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHH
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHH
Confidence 99999999854311 1111 57999999999999
Q ss_pred HHHHHH---cCCcEEEEcCCccccCCcCCCCCc--------cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 113 WKFAKE---NGIDLVAIHPGTVIGPFFQPILNF--------GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 113 ~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.++.+ +|+++.+++||.|.++........ ............ ....+.+++|+|++++.++..+.
T Consensus 152 ~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v~~l~s~~~ 227 (244)
T 4e4y_A 152 KSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEF----PLNRIAQPQEIAELVIFLLSDKS 227 (244)
T ss_dssp HHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcC----CCCCCcCHHHHHHHHHHHhcCcc
Confidence 998874 589999999999987642211000 000111111111 34458899999999999997543
Q ss_pred --CCc-eEEEeC
Q 025065 182 --ASG-RYLLAG 190 (258)
Q Consensus 182 --~~~-~~~~~~ 190 (258)
..| .+.++|
T Consensus 228 ~~itG~~i~vdG 239 (244)
T 4e4y_A 228 KFMTGGLIPIDG 239 (244)
T ss_dssp TTCCSCEEEEST
T ss_pred ccccCCeEeECC
Confidence 356 455554
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-18 Score=138.51 Aligned_cols=172 Identities=20% Similarity=0.241 Sum_probs=121.3
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
...+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|+++++++.++++
T Consensus 2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 2 PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRA-LGDELTAAGAKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp -CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 334678999999999999999999999999999999987533211 111111113468899999999998887764
Q ss_pred ---CCcEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHH
Q 025065 79 ---GCDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~ 106 (258)
++|+|||+||...... .... ..|+.+|.
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 160 (247)
T 2jah_A 81 ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKF 160 (247)
T ss_dssp HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHHHHHH
Confidence 6999999999753221 1111 57999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
..+.+.+.++.+ +|+++++++||.+.++....... .. ........+ + ...++.++|+|++++.++..+.
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~--~-~~~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH--TA-TKEMYEQRI--S-QIRKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC--HH-HHHHHHHHT--T-TSCCBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc--hh-hHHHHHhcc--c-ccCCCCHHHHHHHHHHHhCCCc
Confidence 999998888765 48999999999998875332111 11 111111001 0 1125899999999999998653
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.2e-19 Score=142.18 Aligned_cols=169 Identities=20% Similarity=0.114 Sum_probs=122.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ...+.+|+++.+++.++++
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~------------~~~~~~Dv~~~~~~~~~~~~~~~~~g 93 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA------------DLHLPGDLREAAYADGLPGAVAAGLG 93 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC------------SEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh------------hhccCcCCCCHHHHHHHHHHHHHhcC
Confidence 467899999999999999999999999999999987654321 2345799999988776654
Q ss_pred CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||...... .... ..|+.+|...
T Consensus 94 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 173 (266)
T 3uxy_A 94 RLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAAL 173 (266)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHH
Confidence 6999999999864321 1111 6799999999
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCCcCCC---CC-ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPI---LN-FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~---~~-~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.+++.++.+. |+++.+++||.|.++..... .. ........+.... ....+.+++|+|++++.++....
T Consensus 174 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~~ 249 (266)
T 3uxy_A 174 ASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV----PLGRIAEPEDIADVVLFLASDAA 249 (266)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchh
Confidence 99999988764 89999999999988742210 00 0111112222222 34568899999999999997643
Q ss_pred --CCc-eEEEeC
Q 025065 182 --ASG-RYLLAG 190 (258)
Q Consensus 182 --~~~-~~~~~~ 190 (258)
..| .+.++|
T Consensus 250 ~~itG~~i~vdG 261 (266)
T 3uxy_A 250 RYLCGSLVEVNG 261 (266)
T ss_dssp TTCCSCEEEEST
T ss_pred cCCcCCEEEECc
Confidence 356 555554
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-18 Score=143.39 Aligned_cols=184 Identities=21% Similarity=0.145 Sum_probs=127.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCcc-------c----hhhccccCcCCcEEEEEccCCCcccHH
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPK-------T----EHLRELDGATERLHLFKANLLEEGSFD 74 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 74 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..... . +....+.....++.++++|+++++++.
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 46789999999999999999999999999999988643211 1 111111122457899999999999888
Q ss_pred HHhC-------CCcEEEecCCCCCCCC---CCch----------------------------------------------
Q 025065 75 SAVD-------GCDGVFHTASPVIFLS---DNPQ---------------------------------------------- 98 (258)
Q Consensus 75 ~~~~-------~~d~Vih~a~~~~~~~---~~~~---------------------------------------------- 98 (258)
++++ ++|+|||+||...... ....
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~ 203 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP 203 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC
Confidence 8765 6899999999864321 1111
Q ss_pred --hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCC----------CCccHHHHHHHHcCCCCCCCCcce
Q 025065 99 --EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI----------LNFGAEVILNLINGDQSFAFPYIF 163 (258)
Q Consensus 99 --~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~ 163 (258)
..|+.+|...+.+++.++.+ .|+++.+++||.|+++..... ................. ....|
T Consensus 204 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~ 281 (317)
T 3oec_A 204 GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTL--LPIPW 281 (317)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCS--SSSSS
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhcc--CCCCC
Confidence 67999999999999998877 489999999999998742210 00000011111111111 12578
Q ss_pred eeHHHHHHHHHHhhcCC--CCCc-eEEEeCC
Q 025065 164 VEIRDVVYAHIRALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 164 i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 191 (258)
.+++|+|++++.++... ...| .+.++|.
T Consensus 282 ~~pedvA~av~fL~s~~a~~itG~~i~vdGG 312 (317)
T 3oec_A 282 VEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312 (317)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence 99999999999998654 3456 5555543
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.5e-19 Score=142.70 Aligned_cols=160 Identities=19% Similarity=0.143 Sum_probs=114.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|+++.+++.++++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRA-VEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 467899999999999999999999999999999997644321 111222224578999999999998887764
Q ss_pred CCcEEEecCCCCCC-C---CCCch-----------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIF-L---SDNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~-~---~~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||.... . ..... ..|+.+|..
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 185 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWG 185 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHH
Confidence 58999999998321 1 11111 679999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
.+.+++.++.+ .|+++.+++||.|.++..... .... ....++.++|+|++++.++..+.
T Consensus 186 ~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----------~~~~----~~~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 186 LNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL-----------SAKK----SALGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------CCCHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc-----------cccc----ccccCCCHHHHHHHHHHHhcCcc
Confidence 99999988876 589999999999976542211 0000 22347799999999999998754
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-18 Score=140.75 Aligned_cols=184 Identities=20% Similarity=0.165 Sum_probs=129.1
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc-------cc----hhhccccCcCCcEEEEEccCCCc
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-------KT----EHLRELDGATERLHLFKANLLEE 70 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~----~~~~~~~~~~~~~~~~~~Dl~~~ 70 (258)
|+..+++|++|||||+|+||++++++|+++|++|++++|+.... .. ....++.....++.++++|++++
T Consensus 22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF 101 (299)
T ss_dssp CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence 44456789999999999999999999999999999999874311 01 11122222245789999999999
Q ss_pred ccHHHHhC-------CCcEEEecCCCCCCCC----CCch-----------------------------------------
Q 025065 71 GSFDSAVD-------GCDGVFHTASPVIFLS----DNPQ----------------------------------------- 98 (258)
Q Consensus 71 ~~~~~~~~-------~~d~Vih~a~~~~~~~----~~~~----------------------------------------- 98 (258)
+++.++++ ++|++||+||...... ....
T Consensus 102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~ 181 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG 181 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh
Confidence 98887765 6999999999864322 1111
Q ss_pred -------hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCC----------CccHHHH---HHHHcCCC
Q 025065 99 -------EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPIL----------NFGAEVI---LNLINGDQ 155 (258)
Q Consensus 99 -------~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~----------~~~~~~~---~~~~~g~~ 155 (258)
..|+.+|...+.+++.++.+. |+++..++||.|.++...... ....... ......
T Consensus 182 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 259 (299)
T 3t7c_A 182 LRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV-- 259 (299)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS--
T ss_pred ccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc--
Confidence 679999999999999988774 899999999999987533210 0000000 001111
Q ss_pred CCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEeC
Q 025065 156 SFAFPYIFVEIRDVVYAHIRALEVPK--ASG-RYLLAG 190 (258)
Q Consensus 156 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 190 (258)
. . ..+..++|+|++++.++.... ..| .+.++|
T Consensus 260 -~-p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 294 (299)
T 3t7c_A 260 -L-P-IPYVEPADISNAILFLVSDDARYITGVSLPVDG 294 (299)
T ss_dssp -S-S-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -c-C-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC
Confidence 1 1 458899999999999997542 456 455554
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-19 Score=144.43 Aligned_cols=187 Identities=18% Similarity=0.172 Sum_probs=128.0
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC----------ccc--hhhccccCcCCcEEEEEccCCCc
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS----------PKT--EHLRELDGATERLHLFKANLLEE 70 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~--~~~~~~~~~~~~~~~~~~Dl~~~ 70 (258)
...+++|++|||||+|+||++++++|+++|++|++++|+... ... +....+.....++.++.+|++|.
T Consensus 6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF 85 (277)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 334678999999999999999999999999999999985321 100 11112222245789999999999
Q ss_pred ccHHHHhC-------CCcEEEecCCCCCCCC---CCch------------------------------------------
Q 025065 71 GSFDSAVD-------GCDGVFHTASPVIFLS---DNPQ------------------------------------------ 98 (258)
Q Consensus 71 ~~~~~~~~-------~~d~Vih~a~~~~~~~---~~~~------------------------------------------ 98 (258)
+++.++++ ++|++||+||...... ....
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 165 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM 165 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence 98887764 5899999999864321 1111
Q ss_pred ------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC---CCCC--CCccee
Q 025065 99 ------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD---QSFA--FPYIFV 164 (258)
Q Consensus 99 ------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~---~~~~--~~~~~i 164 (258)
..|+.+|...+.+++.++.+ +|+++..++||.|.++..... ............. ..+. ....+.
T Consensus 166 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~r~~ 243 (277)
T 3tsc_A 166 KMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD--MVTAVGQAMETNPQLSHVLTPFLPDWVA 243 (277)
T ss_dssp SCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH--HHHHHHHHHHTCGGGTTTTCCSSSCSCB
T ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch--hhhhhhhcccccHHHHHHhhhccCCCCC
Confidence 67999999999999998876 489999999999988753211 0000111111111 1111 112489
Q ss_pred eHHHHHHHHHHhhcCCC--CCc-eEEEeCC
Q 025065 165 EIRDVVYAHIRALEVPK--ASG-RYLLAGS 191 (258)
Q Consensus 165 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 191 (258)
+++|+|++++.++..+. ..| .+.++|.
T Consensus 244 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG 273 (277)
T 3tsc_A 244 EPEDIADTVCWLASDESRKVTAAQIPVDQG 273 (277)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence 99999999999997543 456 4555544
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.2e-19 Score=143.07 Aligned_cols=167 Identities=16% Similarity=0.096 Sum_probs=114.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++ ..++.++++|+++++++.++++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQE-TAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFG 101 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 356889999999999999999999999999999987543211 11111 2468899999999998888775
Q ss_pred CCcEEEecCCCCCCC----CCCch-------------------------------------------------hhHHHHH
Q 025065 79 GCDGVFHTASPVIFL----SDNPQ-------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~----~~~~~-------------------------------------------------~~Y~~sK 105 (258)
++|+|||+||..... ..... ..|+.+|
T Consensus 102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK 181 (272)
T 4dyv_A 102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATK 181 (272)
T ss_dssp CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHH
Confidence 799999999985321 11111 6799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCC
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
...+.+++.++.+ .|+++..++||.|.++........ ....... . ....+..++|+|++++.++..+..
T Consensus 182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~---~-~~~~~~~pedvA~~v~fL~s~~~~ 253 (272)
T 4dyv_A 182 HAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG----VPQADLS---I-KVEPVMDVAHVASAVVYMASLPLD 253 (272)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------------CHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc----chhhhhc---c-cccCCCCHHHHHHHHHHHhCCCCc
Confidence 9999999998876 489999999999987643221100 0000000 0 233478999999999999998765
Q ss_pred Cc
Q 025065 183 SG 184 (258)
Q Consensus 183 ~~ 184 (258)
..
T Consensus 254 ~~ 255 (272)
T 4dyv_A 254 AN 255 (272)
T ss_dssp SC
T ss_pred Cc
Confidence 43
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.7e-19 Score=143.20 Aligned_cols=166 Identities=17% Similarity=0.188 Sum_probs=115.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.....++.++.+|+++++++.++++ +
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEA-IATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999987543221 112222223568899999999998887764 6
Q ss_pred CcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||....... ... ..|+.+|...+
T Consensus 82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 161 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVR 161 (264)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHH
Confidence 8999999998643211 111 67999999999
Q ss_pred HHHHHHHHHc-CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCC-CCcceeeHHHHHHHHHHhhcCCCC
Q 025065 110 EAAWKFAKEN-GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 110 ~~~~~~~~~~-~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
.+.+.++.+. |+++..++||.|.++......... .. .... ....+..++|+|++++.++..+..
T Consensus 162 ~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~---~~------~~~~~~~~~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 162 AISDGLRQESTNIRVTCVNPGVVESELAGTITHEE---TM------AAMDTYRAIALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp HHHHHHHHHCSSEEEEEEEECCC--------------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHhCCCCEEEEEecCCCcCcccccccchh---HH------HHHHhhhccCCCHHHHHHHHHHHhcCCcc
Confidence 9999988775 899999999999876432110000 00 0000 112257899999999999998764
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.3e-19 Score=142.24 Aligned_cols=181 Identities=15% Similarity=0.096 Sum_probs=126.1
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccc-cCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+...... ...++ .....++.++.+|+++++++.++++
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASE-AAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999987543211 11111 1113468889999999998887765
Q ss_pred --CCcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK 105 (258)
++|+|||+||...... .... ..|+.+|
T Consensus 97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 176 (267)
T 1vl8_A 97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK 176 (267)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHH
Confidence 6899999999754211 1110 4799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
...+.+++.++.+ +|+++++++||.+.++....... .......+.... ....+..++|+|++++.++..+
T Consensus 177 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~----p~~~~~~p~dvA~~v~~l~s~~~~ 251 (267)
T 1vl8_A 177 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-DPEKLDYMLKRI----PLGRTGVPEDLKGVAVFLASEEAK 251 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-CHHHHHHHHHTC----TTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc-ChHHHHHHHhhC----CCCCCcCHHHHHHHHHHHcCcccc
Confidence 9999999988876 48999999999998764221000 011122222221 2234789999999999998753
Q ss_pred CCCc-eEEEeCC
Q 025065 181 KASG-RYLLAGS 191 (258)
Q Consensus 181 ~~~~-~~~~~~~ 191 (258)
...| .+.+.+.
T Consensus 252 ~itG~~i~vdGG 263 (267)
T 1vl8_A 252 YVTGQIIFVDGG 263 (267)
T ss_dssp TCCSCEEEESTT
T ss_pred CCcCCeEEECCC
Confidence 2356 4455543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=138.53 Aligned_cols=166 Identities=15% Similarity=0.124 Sum_probs=118.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.. +.+.++++|++|++++.++++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 86 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------EGFLAVKCDITDTEQVEQAYKEIEETHG 86 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------TTSEEEECCTTSHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------------ccceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999999999976432 236789999999998887765
Q ss_pred CCcEEEecCCCCCCC------CCCch--------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFL------SDNPQ--------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~------~~~~~--------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+||..... ..+.. ..|+.+|...
T Consensus 87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 166 (253)
T 2nm0_A 87 PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGL 166 (253)
T ss_dssp SCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence 479999999985321 11111 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--AS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~ 183 (258)
+.+.+.++.+ .|+++++++||.+.++........ ......... ....++.++|+|++++.++..+. ..
T Consensus 167 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~----p~~~~~~p~dvA~~i~~l~s~~~~~~t 239 (253)
T 2nm0_A 167 VGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDE---QRANIVSQV----PLGRYARPEEIAATVRFLASDDASYIT 239 (253)
T ss_dssp HHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTTC----TTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHH---HHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCCc
Confidence 9999988876 479999999999987643211000 111122211 22358899999999999987642 35
Q ss_pred c-eEEEeC
Q 025065 184 G-RYLLAG 190 (258)
Q Consensus 184 ~-~~~~~~ 190 (258)
| .+.+.|
T Consensus 240 G~~i~vdG 247 (253)
T 2nm0_A 240 GAVIPVDG 247 (253)
T ss_dssp SCEEEEST
T ss_pred CcEEEECC
Confidence 6 445544
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.1e-19 Score=141.16 Aligned_cols=174 Identities=21% Similarity=0.182 Sum_probs=124.3
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+.+++|++|||||+|+||++++++|+++|++|++++|+..+. ...+ ..++.++++|+++++++.++++
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV----VADL---GDRARFAAADVTDEAAVASALDLAETM 77 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH----HHHT---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH----HHhc---CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 345678999999999999999999999999999999854221 1111 3578999999999998888775
Q ss_pred -CCcEEEecCCCCCCC-------CCCch----------------------------------------------------
Q 025065 79 -GCDGVFHTASPVIFL-------SDNPQ---------------------------------------------------- 98 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~-------~~~~~---------------------------------------------------- 98 (258)
++|++||+||..... .....
T Consensus 78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 157 (257)
T 3tl3_A 78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ 157 (257)
T ss_dssp SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence 799999999964210 00000
Q ss_pred ---hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 99 ---EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 99 ---~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
..|+.+|...+.+++.++.+ +|+++..++||.|.++..... ............+ ....+.+++|+|++
T Consensus 158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~---~~~r~~~p~dva~~ 231 (257)
T 3tl3_A 158 IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---PEEARASLGKQVP---HPSRLGNPDEYGAL 231 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHTSS---SSCSCBCHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---cHHHHHHHHhcCC---CCCCccCHHHHHHH
Confidence 57999999999999888876 489999999999988754321 1112222222211 11458899999999
Q ss_pred HHHhhcCCCCCc-eEEEeC
Q 025065 173 HIRALEVPKASG-RYLLAG 190 (258)
Q Consensus 173 ~~~~~~~~~~~~-~~~~~~ 190 (258)
++.++..+...| .+.++|
T Consensus 232 v~~l~s~~~itG~~i~vdG 250 (257)
T 3tl3_A 232 AVHIIENPMLNGEVIRLDG 250 (257)
T ss_dssp HHHHHHCTTCCSCEEEEST
T ss_pred HHHHhcCCCCCCCEEEECC
Confidence 999999877777 445554
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=141.91 Aligned_cols=178 Identities=13% Similarity=0.045 Sum_probs=127.9
Q ss_pred CCCcEEEEECCcch--HHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGF--VASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+|+ ||++++++|+++|++|++++|+... +.+.++.....++.++.+|+++.+++.++++
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFK---DRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV 100 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCH---HHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHH---HHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 46789999999977 9999999999999999999998721 2222222223458899999999998887764
Q ss_pred --CCcEEEecCCCCCCC----C----CCch----------------------------------------------hhHH
Q 025065 79 --GCDGVFHTASPVIFL----S----DNPQ----------------------------------------------EWYS 102 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~----~----~~~~----------------------------------------------~~Y~ 102 (258)
++|+|||+||..... . .... ..|+
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 180 (280)
T 3nrc_A 101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMG 180 (280)
T ss_dssp CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHH
T ss_pred cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhH
Confidence 579999999986431 0 1111 6899
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+|.+.+.+++.++.+ .|+++.+++||.|.++...... ............. ....+..++|+|++++.++..
T Consensus 181 asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----p~~~~~~pedvA~~v~~l~s~ 255 (280)
T 3nrc_A 181 VAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS-NFKKMLDYNAMVS----PLKKNVDIMEVGNTVAFLCSD 255 (280)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT-THHHHHHHHHHHS----TTCSCCCHHHHHHHHHHTTSG
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc-chHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCc
Confidence 9999999999988876 5899999999999987544321 1122222222221 234578999999999999975
Q ss_pred CC--CCc-eEEEeCC
Q 025065 180 PK--ASG-RYLLAGS 191 (258)
Q Consensus 180 ~~--~~~-~~~~~~~ 191 (258)
.. ..| .+.+++.
T Consensus 256 ~~~~~tG~~i~vdgG 270 (280)
T 3nrc_A 256 MATGITGEVVHVDAG 270 (280)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred ccCCcCCcEEEECCC
Confidence 42 456 5555543
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=8e-19 Score=139.09 Aligned_cols=147 Identities=18% Similarity=0.142 Sum_probs=111.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++|++|||||+|+||++++++|+++|++|++++|+..... ....++.+|+++++++.++++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 69 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQ 69 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999999999865431 135678899999988877664
Q ss_pred --CCcEEEecCCCCCCCCC--C-ch----------------------------------------------hhHHHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSD--N-PQ----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~--~-~~----------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||....... . .. ..|+.+|..
T Consensus 70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 149 (236)
T 1ooe_A 70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAA 149 (236)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHH
Confidence 68999999997542211 1 11 579999999
Q ss_pred HHHHHHHHHHHc-----CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 108 AEEAAWKFAKEN-----GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 108 ~e~~~~~~~~~~-----~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
.+.+++.++.+. |+++++++||.+.++... ...... ....++.++|+|++++.++.
T Consensus 150 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~----~~~~~~~~~dvA~~i~~~l~ 210 (236)
T 1ooe_A 150 VHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR-----------KWMPNA----DHSSWTPLSFISEHLLKWTT 210 (236)
T ss_dssp HHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH-----------HHSTTC----CGGGCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh-----------hcCCCc----cccccCCHHHHHHHHHHHHc
Confidence 999999988764 499999999999876311 111111 12346788999999997663
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=7.2e-19 Score=141.06 Aligned_cols=178 Identities=20% Similarity=0.179 Sum_probs=123.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+|++|||||+|+||++++++|+++|++|++++|+.+.... ....+.....++.++++|+++++++.++++ ++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKA-VASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999999999987543211 111111113468899999999998888776 79
Q ss_pred cEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 81 d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~~e 109 (258)
|+|||+||...... .... ..|+.+|...+
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 160 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 160 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence 99999999753211 1110 57999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
.+++.++.+ +|+++++++||.+.++....... ........+.... ....+.+++|+|++++.++.
T Consensus 161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v~~l~s 236 (256)
T 1geg_A 161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI----TLGRLSEPEDVAACVSYLAS 236 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC----TTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhC
Confidence 999988866 48999999999998864211000 0000111111111 23358899999999999987
Q ss_pred CC--CCCc-eEEEeC
Q 025065 179 VP--KASG-RYLLAG 190 (258)
Q Consensus 179 ~~--~~~~-~~~~~~ 190 (258)
.+ ...| .+.+++
T Consensus 237 ~~~~~~tG~~i~vdG 251 (256)
T 1geg_A 237 PDSDYMTGQSLLIDG 251 (256)
T ss_dssp GGGTTCCSCEEEESS
T ss_pred ccccCCCCCEEEeCC
Confidence 54 2456 445554
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.6e-19 Score=138.96 Aligned_cols=152 Identities=24% Similarity=0.238 Sum_probs=107.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
++|+||||||+|+||++++++|+++|++|++++|+...... ....+ .++.++.+|+++.+++.++++ +
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQA-LAAEL----EGALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHS----TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh----hhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999999999987532211 11111 257889999999988887664 6
Q ss_pred CcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|+|||+||...... .... ..|+.+|...+
T Consensus 79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 158 (234)
T 2ehd_A 79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLL 158 (234)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHH
Confidence 899999999753211 1110 68999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
.+++.++.+ +|++++++|||.+.++..... .. . +.++.++|+|++++.++..+.
T Consensus 159 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------------~~-----~-~~~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 159 GLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT------------PG-----Q-AWKLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp HHHHHHHHHHGGGTEEEEEEECC----------------------------------CCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc------------cc-----c-cCCCCHHHHHHHHHHHhCCCc
Confidence 998888765 589999999999976532210 00 1 115799999999999998753
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=145.35 Aligned_cols=179 Identities=20% Similarity=0.155 Sum_probs=125.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ...++ ..++.++++|+++++++.++++
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ-LAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 567899999999999999999999999999999987533211 11111 2468899999999998887664
Q ss_pred CCcEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+||...... .... ..|+.+|...+
T Consensus 80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 159 (253)
T 1hxh_A 80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVS 159 (253)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHHHHHHH
Confidence 4799999999853211 1111 57999999999
Q ss_pred HHHHHHHHH---c--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCCCCcceeeHHHHHHHHHHhhcCCC--
Q 025065 110 EAAWKFAKE---N--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVPK-- 181 (258)
Q Consensus 110 ~~~~~~~~~---~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~i~v~D~a~~~~~~~~~~~-- 181 (258)
.+++.++.+ + |++++++|||.++++......... ......... ... ....+.+++|+|++++.++..+.
T Consensus 160 ~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~-p~~~~~~~~dvA~~~~~l~s~~~~~ 236 (253)
T 1hxh_A 160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG--VSKEMVLHDPKLN-RAGRAYMPERIAQLVLFLASDESSV 236 (253)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT--CCHHHHBCBTTTB-TTCCEECHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchh--hhHHHHhhhhccC-ccCCCCCHHHHHHHHHHHcCccccC
Confidence 999888766 3 899999999999987532100000 011101110 011 23458899999999999997642
Q ss_pred CCc-eEEEeCC
Q 025065 182 ASG-RYLLAGS 191 (258)
Q Consensus 182 ~~~-~~~~~~~ 191 (258)
..| .+.+++.
T Consensus 237 ~tG~~~~vdgG 247 (253)
T 1hxh_A 237 MSGSELHADNS 247 (253)
T ss_dssp CCSCEEEESSS
T ss_pred CCCcEEEECCC
Confidence 356 4555544
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-19 Score=144.23 Aligned_cols=186 Identities=16% Similarity=0.087 Sum_probs=127.5
Q ss_pred CCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
.++|+||||||+ |+||++++++|+++|++|++++|+.... +.+.++......+.++++|+++++++.++++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK--DRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH--HHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 467999999999 9999999999999999999999874322 2222222222457899999999998888775
Q ss_pred --CCcEEEecCCCCCC-----CCCC---ch---------------------------------------------hhHHH
Q 025065 79 --GCDGVFHTASPVIF-----LSDN---PQ---------------------------------------------EWYSL 103 (258)
Q Consensus 79 --~~d~Vih~a~~~~~-----~~~~---~~---------------------------------------------~~Y~~ 103 (258)
++|+|||+||.... ...+ .. ..|+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 169 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGL 169 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHH
T ss_pred cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchhH
Confidence 57999999998542 1111 11 67999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|.+.+.+++.++.+ .|+++++++||.|.++..... .............. ....+..++|+|++++.++...
T Consensus 170 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~----~~~~~~~pedva~~i~~l~s~~ 244 (271)
T 3ek2_A 170 AKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-KSFGKILDFVESNS----PLKRNVTIEQVGNAGAFLLSDL 244 (271)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-HHHHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-cchHHHHHHHHhcC----CcCCCCCHHHHHHHHHHHcCcc
Confidence 999999999988876 389999999999988753321 11112222222222 2345789999999999999763
Q ss_pred --CCCc-eEEEe-CCCcCHHHH
Q 025065 181 --KASG-RYLLA-GSVAQHSDI 198 (258)
Q Consensus 181 --~~~~-~~~~~-~~~~t~~e~ 198 (258)
...| .+.++ |...++.++
T Consensus 245 ~~~~tG~~i~vdgG~~~~~~~~ 266 (271)
T 3ek2_A 245 ASGVTAEVMHVDSGFNAVVGGM 266 (271)
T ss_dssp GTTCCSEEEEESTTGGGBCCCC
T ss_pred cCCeeeeEEEECCCeeeehhhh
Confidence 3466 45555 444444443
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.4e-19 Score=141.13 Aligned_cols=179 Identities=19% Similarity=0.164 Sum_probs=124.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc-cchhhccccCcCCcEEEEEccCCCcccHHHHhC-------C
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------G 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~ 79 (258)
+|++|||||+|+||++++++|+++|++|++++|+.... .......+.....++.++++|+++++++.++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 57899999999999999999999999999999876431 111112222223568899999999998887765 7
Q ss_pred CcEEEecCCCCCCCC---CCch------------------------------------------------hhHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~------------------------------------------------~~Y~~sK~~~ 108 (258)
+|+|||+||...... .... ..|+.+|...
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 161 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV 161 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence 999999999753311 0110 5799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC--------CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL--------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
+.+++.++.+ +|+++++++||.+.++...... .........+.... ....+.+++|+|++++.++
T Consensus 162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dvA~~v~~l~ 237 (258)
T 3a28_C 162 RGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSI----ALGRPSVPEDVAGLVSFLA 237 (258)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTC----TTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcC----CCCCccCHHHHHHHHHHHh
Confidence 9999988766 4899999999999876321100 00001111222111 2335889999999999999
Q ss_pred cCC--CCCc-eEEEeC
Q 025065 178 EVP--KASG-RYLLAG 190 (258)
Q Consensus 178 ~~~--~~~~-~~~~~~ 190 (258)
..+ ...| .+.+++
T Consensus 238 s~~~~~~tG~~i~vdG 253 (258)
T 3a28_C 238 SENSNYVTGQVMLVDG 253 (258)
T ss_dssp SGGGTTCCSCEEEESS
T ss_pred CcccCCCCCCEEEECC
Confidence 754 2456 445554
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-18 Score=138.94 Aligned_cols=170 Identities=21% Similarity=0.176 Sum_probs=123.0
Q ss_pred CCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc------hhhccccCcCCcEEEEEccCCCcccHHHH
Q 025065 3 SGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT------EHLRELDGATERLHLFKANLLEEGSFDSA 76 (258)
Q Consensus 3 ~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (258)
++.+++|++|||||+|+||++++++|+++|++|++++|+..+... +....+.....++.++++|+++++++.++
T Consensus 4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 83 (285)
T 3sc4_A 4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA 83 (285)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 344678999999999999999999999999999999998764211 11111222245789999999999988877
Q ss_pred hC-------CCcEEEecCCCCCCCCC---Cch------------------------------------------------
Q 025065 77 VD-------GCDGVFHTASPVIFLSD---NPQ------------------------------------------------ 98 (258)
Q Consensus 77 ~~-------~~d~Vih~a~~~~~~~~---~~~------------------------------------------------ 98 (258)
++ ++|++||+||....... ...
T Consensus 84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~ 163 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRP 163 (285)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCS
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCC
Confidence 65 79999999998643211 111
Q ss_pred hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCc-cccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHH
Q 025065 99 EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGT-VIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHI 174 (258)
Q Consensus 99 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~-v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~ 174 (258)
..|+.+|...+.+++.++.+ +|+++..++||. +-.+ +......... ....+..++|+|++++
T Consensus 164 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~-----------~~~~~~~~~~---~~~r~~~pedvA~~~~ 229 (285)
T 3sc4_A 164 TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA-----------AVQNLLGGDE---AMARSRKPEVYADAAY 229 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH-----------HHHHHHTSCC---CCTTCBCTHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH-----------HHHhhccccc---cccCCCCHHHHHHHHH
Confidence 46999999999999998877 589999999984 4221 1223222221 2234678999999999
Q ss_pred HhhcCCC-CCceE
Q 025065 175 RALEVPK-ASGRY 186 (258)
Q Consensus 175 ~~~~~~~-~~~~~ 186 (258)
.++..+. ..|..
T Consensus 230 ~l~s~~~~~tG~~ 242 (285)
T 3sc4_A 230 VVLNKPSSYTGNT 242 (285)
T ss_dssp HHHTSCTTCCSCE
T ss_pred HHhCCcccccceE
Confidence 9998764 34433
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=140.19 Aligned_cols=179 Identities=16% Similarity=0.071 Sum_probs=125.7
Q ss_pred CCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+ |+||++++++|+++|++|++++|+.. . ....+++.....++.++.+|+++++++.++++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-L-EKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-T-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-H-HHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999999 99999999999999999999999874 1 11222221111237889999999998887765
Q ss_pred --CCcEEEecCCCCCC----C---CCCch---------------------------------------------hhHHHH
Q 025065 79 --GCDGVFHTASPVIF----L---SDNPQ---------------------------------------------EWYSLA 104 (258)
Q Consensus 79 --~~d~Vih~a~~~~~----~---~~~~~---------------------------------------------~~Y~~s 104 (258)
++|+|||+||.... . ..... ..|+.+
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 161 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLA 161 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHH
T ss_pred cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHH
Confidence 68999999997532 1 11111 569999
Q ss_pred HHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 105 KTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
|...+.+++.++.+. |+++++++||.|.++..... .........+.... ....+..++|+|++++.++...
T Consensus 162 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~----p~~~~~~p~dva~~~~~l~s~~~ 236 (275)
T 2pd4_A 162 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-ADFRMILKWNEINA----PLRKNVSLEEVGNAGMYLLSSLS 236 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc-cccHHHHHHHHhcC----CcCCCCCHHHHHHHHHHHhCccc
Confidence 999999999888764 89999999999998753321 11122222222211 2234679999999999998753
Q ss_pred -CCCc-eEEEeCC
Q 025065 181 -KASG-RYLLAGS 191 (258)
Q Consensus 181 -~~~~-~~~~~~~ 191 (258)
...| .+...+.
T Consensus 237 ~~~tG~~~~vdgg 249 (275)
T 2pd4_A 237 SGVSGEVHFVDAG 249 (275)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCCCCCEEEECCC
Confidence 2356 4455543
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.7e-19 Score=139.44 Aligned_cols=157 Identities=20% Similarity=0.123 Sum_probs=114.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
|++|++|||||+|+||++++++|+++|++|++++|+.+.... ....+ ..++.++.+|+++++++.++++
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQ-QELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 346899999999999999999999999999999997643221 11111 2358999999999998887765
Q ss_pred CCcEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+||...... .... ..|+.+|...+
T Consensus 77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~ 156 (235)
T 3l6e_A 77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMR 156 (235)
T ss_dssp SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHH
Confidence 5899999999853321 1111 67999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCC
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
.+.+.++.+ .|+++..++||.|..+...... . . ....++.++|+|++++.++.++..
T Consensus 157 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--------~----~----~~~~~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 157 GFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD--------H----V----DPSGFMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp HHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------CBCHHHHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHhhccCCEEEEEeCCCccCcchhccC--------C----C----CCcCCCCHHHHHHHHHHHHhCCCC
Confidence 999998876 4799999999999765422110 0 0 122478999999999999987643
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=141.94 Aligned_cols=178 Identities=16% Similarity=0.020 Sum_probs=126.2
Q ss_pred CCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+| +||++++++|+++|++|++++|+.... +....+......+.++++|+++++++.++++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK--KRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH--HHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4678999999997 999999999999999999999985322 1121111112346889999999998888775
Q ss_pred --CCcEEEecCCCCCC-------CCCCch---------------------------------------------hhHHHH
Q 025065 79 --GCDGVFHTASPVIF-------LSDNPQ---------------------------------------------EWYSLA 104 (258)
Q Consensus 79 --~~d~Vih~a~~~~~-------~~~~~~---------------------------------------------~~Y~~s 104 (258)
++|++||+||.... ...... ..|+.+
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~as 185 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGVC 185 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHHHH
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhHHH
Confidence 68999999998532 111111 679999
Q ss_pred HHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 105 KTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
|...+.+++.++.+. |+++..++||.|.++..... .............. ....+..++|+|++++.++...
T Consensus 186 Kaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~fL~s~~a 260 (296)
T 3k31_A 186 KAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-SDFHYILTWNKYNS----PLRRNTTLDDVGGAALYLLSDLG 260 (296)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-HHHHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-cchHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCCcc
Confidence 999999999988764 89999999999998754321 11111122222211 2335778999999999999753
Q ss_pred -CCCc-eEEEeC
Q 025065 181 -KASG-RYLLAG 190 (258)
Q Consensus 181 -~~~~-~~~~~~ 190 (258)
...| .+.++|
T Consensus 261 ~~itG~~i~vdG 272 (296)
T 3k31_A 261 RGTTGETVHVDC 272 (296)
T ss_dssp TTCCSCEEEEST
T ss_pred CCccCCEEEECC
Confidence 3456 555554
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=141.67 Aligned_cols=177 Identities=15% Similarity=0.057 Sum_probs=125.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ....+.....++.++++|+++.+++.++++
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEK-AEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG 110 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHH-HHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999998654321 111111113468899999999998887775
Q ss_pred CCcEEEecCCCCCC-CCC--Cch---------------------------------------------------hhHHHH
Q 025065 79 GCDGVFHTASPVIF-LSD--NPQ---------------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ~~d~Vih~a~~~~~-~~~--~~~---------------------------------------------------~~Y~~s 104 (258)
++|+|||+||.... ... ... ..|+.+
T Consensus 111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s 190 (279)
T 3ctm_A 111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTA 190 (279)
T ss_dssp CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHH
T ss_pred CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHH
Confidence 48999999997543 111 110 469999
Q ss_pred HHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 105 KTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
|...|.+++.++.+. + ++++++||.+.++..... .......+.... ....+++++|+|++++.++..+
T Consensus 191 K~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~----p~~~~~~~~dvA~~~~~l~s~~~ 262 (279)
T 3ctm_A 191 KAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA---SKDMKAKWWQLT----PLGREGLTQELVGGYLYLASNAS 262 (279)
T ss_dssp HHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC---CHHHHHHHHHHS----TTCSCBCGGGTHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc---ChHHHHHHHHhC----CccCCcCHHHHHHHHHHHhCccc
Confidence 999999999988773 6 999999999988754321 111222221111 2335889999999999999764
Q ss_pred -CCCc-eEEEeCC
Q 025065 181 -KASG-RYLLAGS 191 (258)
Q Consensus 181 -~~~~-~~~~~~~ 191 (258)
...| .+.+++.
T Consensus 263 ~~~tG~~i~vdgG 275 (279)
T 3ctm_A 263 TFTTGSDVVIDGG 275 (279)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCccCCEEEECCC
Confidence 2455 5555543
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=141.23 Aligned_cols=176 Identities=18% Similarity=0.104 Sum_probs=124.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+... ....++... .++.++.+|+++++++.++++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACA-DTATRLSAY-GDCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHHHTTS-SCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhc-CceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999998753321 111222211 268889999999998887765
Q ss_pred CCcEEEecCCCCCCC---CCCch---------------------------------------------------h-hHHH
Q 025065 79 GCDGVFHTASPVIFL---SDNPQ---------------------------------------------------E-WYSL 103 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~---~~~~~---------------------------------------------------~-~Y~~ 103 (258)
++|+|||+||..... ..... . .|+.
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~a 184 (276)
T 2b4q_A 105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGP 184 (276)
T ss_dssp CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHH
Confidence 689999999975321 11110 4 8999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHc--CCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLIN--GDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+|...+.+++.++.+ .|+++++++||.+.++........ ....... .. ....+.+++|+|++++.++.
T Consensus 185 sK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~----p~~r~~~p~dvA~~v~~l~s 257 (276)
T 2b4q_A 185 SKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND---PQALEADSASI----PMGRWGRPEEMAALAISLAG 257 (276)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC---HHHHHHHHHTS----TTSSCCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh---HHHHHHhhcCC----CCCCcCCHHHHHHHHHHHhC
Confidence 999999999988876 489999999999987742210000 1111111 11 23358899999999999987
Q ss_pred CC--CCCc-eEEEeC
Q 025065 179 VP--KASG-RYLLAG 190 (258)
Q Consensus 179 ~~--~~~~-~~~~~~ 190 (258)
.+ ...| .+.+++
T Consensus 258 ~~~~~~tG~~i~vdG 272 (276)
T 2b4q_A 258 TAGAYMTGNVIPIDG 272 (276)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred ccccCCCCCEEEeCC
Confidence 64 2456 445554
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=141.60 Aligned_cols=179 Identities=14% Similarity=0.001 Sum_probs=124.5
Q ss_pred CCCcEEEEECCcch--HHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGF--VASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+|+ ||++++++|+++|++|++++|+.... +...++.....++.++++|++|.+++.++++
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK--KRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH--HHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH--HHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence 56789999999988 99999999999999999999874221 1122111112468899999999998888765
Q ss_pred --CCcEEEecCCCCCC----C---CCCch---------------------------------------------hhHHHH
Q 025065 79 --GCDGVFHTASPVIF----L---SDNPQ---------------------------------------------EWYSLA 104 (258)
Q Consensus 79 --~~d~Vih~a~~~~~----~---~~~~~---------------------------------------------~~Y~~s 104 (258)
++|++||+||.... . ..... ..|+.+
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~as 186 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVA 186 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHH
Confidence 68999999998641 1 11111 679999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
|...+.+++.++.+ +|+++.+++||.|.++...... ............. ....+..++|+|++++.++...
T Consensus 187 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~~ 261 (293)
T 3grk_A 187 KAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG-DFRYILKWNEYNA----PLRRTVTIDEVGDVGLYFLSDLS 261 (293)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C-CHHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc-chHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHcCccc
Confidence 99999999998876 4899999999999987533221 1112222222221 2345779999999999998753
Q ss_pred -CCCc-eEEEeCC
Q 025065 181 -KASG-RYLLAGS 191 (258)
Q Consensus 181 -~~~~-~~~~~~~ 191 (258)
...| .+.++|.
T Consensus 262 ~~itG~~i~vdGG 274 (293)
T 3grk_A 262 RSVTGEVHHADSG 274 (293)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCCcceEEEECCC
Confidence 3456 4555543
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=141.81 Aligned_cols=168 Identities=22% Similarity=0.217 Sum_probs=117.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc--CcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ....+. .....+.++.+|+++++++.++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEE-LAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHH-HHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999987533211 111111 112457889999999998887765
Q ss_pred --CCcEEEecCCCCCCCCC---Cch---------------------------------------------------hhHH
Q 025065 79 --GCDGVFHTASPVIFLSD---NPQ---------------------------------------------------EWYS 102 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~---~~~---------------------------------------------------~~Y~ 102 (258)
++|+|||+||....... ... ..|+
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~ 188 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS 188 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhH
Confidence 79999999997532110 000 4699
Q ss_pred HHHHHHHHHHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 103 LAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
.+|...+.+++.++.+ .++++++++||.|.++................. ....+++++|+|++++.++
T Consensus 189 ~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dvA~~i~~l~ 261 (279)
T 1xg5_A 189 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY-------EQMKCLKPEDVAEAVIYVL 261 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH-------C---CBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhc-------ccccCCCHHHHHHHHHHHh
Confidence 9999999998887754 479999999999987742110011111111111 2234789999999999999
Q ss_pred cCCC
Q 025065 178 EVPK 181 (258)
Q Consensus 178 ~~~~ 181 (258)
..+.
T Consensus 262 ~~~~ 265 (279)
T 1xg5_A 262 STPA 265 (279)
T ss_dssp HSCT
T ss_pred cCCc
Confidence 8764
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=137.46 Aligned_cols=156 Identities=21% Similarity=0.261 Sum_probs=114.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
|++|+||||||+|+||++++++|+++| ++|++++|+..... .+... ...++.++.+|+++++++.++++
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~--~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT--ELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH--HHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH--HHHhc--cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999999 99999999765432 22222 13578999999999998888776
Q ss_pred ----CCcEEEecCCCCC-CCC----------------------------------------C------------------
Q 025065 79 ----GCDGVFHTASPVI-FLS----------------------------------------D------------------ 95 (258)
Q Consensus 79 ----~~d~Vih~a~~~~-~~~----------------------------------------~------------------ 95 (258)
++|+|||+||... ... .
T Consensus 77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 156 (250)
T 1yo6_A 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence 7999999998754 100 0
Q ss_pred ----------CchhhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcc
Q 025065 96 ----------NPQEWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI 162 (258)
Q Consensus 96 ----------~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (258)
.+...|+.+|...+.+++.++.+. |++++++|||.+.++.... ..
T Consensus 157 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------~~ 214 (250)
T 1yo6_A 157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------------NA 214 (250)
T ss_dssp STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred cCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------------CC
Confidence 011369999999999999988775 8999999999997764211 12
Q ss_pred eeeHHHHHHHHHHhhcCCC--CCceEE
Q 025065 163 FVEIRDVVYAHIRALEVPK--ASGRYL 187 (258)
Q Consensus 163 ~i~v~D~a~~~~~~~~~~~--~~~~~~ 187 (258)
+++++|+|+.++.++..+. ..|.|+
T Consensus 215 ~~~~~~~a~~~~~~~~~~~~~~~G~~~ 241 (250)
T 1yo6_A 215 ALTVEQSTAELISSFNKLDNSHNGRFF 241 (250)
T ss_dssp ----HHHHHHHHHHHTTCCGGGTTCEE
T ss_pred CCCHHHHHHHHHHHHhcccccCCCeEE
Confidence 5789999999999998764 356553
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=141.05 Aligned_cols=175 Identities=21% Similarity=0.186 Sum_probs=126.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------G 79 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~ 79 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ...++ ..++.++++|+++.+++.++++ +
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~-~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKA-LADEL---GNRAEFVSTNVTSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999987543221 11111 3578999999999999888775 5
Q ss_pred CcEEEec-CCCCCCCC--------CCch----------------------------------------------------
Q 025065 80 CDGVFHT-ASPVIFLS--------DNPQ---------------------------------------------------- 98 (258)
Q Consensus 80 ~d~Vih~-a~~~~~~~--------~~~~---------------------------------------------------- 98 (258)
+|+|||+ |+...... ....
T Consensus 104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 183 (281)
T 3ppi_A 104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIG 183 (281)
T ss_dssp EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTT
T ss_pred CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCC
Confidence 7999999 44432211 1110
Q ss_pred -hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHH
Q 025065 99 -EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHI 174 (258)
Q Consensus 99 -~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~ 174 (258)
..|+.+|.+.+.+++.++.+. |+++..++||.|.++..... .......+....+ ....+.+++|+|++++
T Consensus 184 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~---~~~~~~~pedvA~~v~ 257 (281)
T 3ppi_A 184 QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV---GEEALAKFAANIP---FPKRLGTPDEFADAAA 257 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT---CHHHHHHHHHTCC---SSSSCBCHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc---cHHHHHHHHhcCC---CCCCCCCHHHHHHHHH
Confidence 679999999999998888764 89999999999987643321 1122333333221 1156889999999999
Q ss_pred HhhcCCCCCc-eEEEeC
Q 025065 175 RALEVPKASG-RYLLAG 190 (258)
Q Consensus 175 ~~~~~~~~~~-~~~~~~ 190 (258)
.++..+...| .+.++|
T Consensus 258 ~l~s~~~~tG~~i~vdG 274 (281)
T 3ppi_A 258 FLLTNGYINGEVMRLDG 274 (281)
T ss_dssp HHHHCSSCCSCEEEEST
T ss_pred HHHcCCCcCCcEEEECC
Confidence 9999876677 445553
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-18 Score=137.43 Aligned_cols=168 Identities=15% Similarity=0.055 Sum_probs=119.3
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CCc
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCD 81 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d 81 (258)
.+++|++|||||+|+||++++++|+++|++|++++|+.. ...++ ..+.++ +|+ .+++.++++ ++|
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~----~~~~~~-~D~--~~~~~~~~~~~~~iD 83 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-----LLKRS----GHRYVV-CDL--RKDLDLLFEKVKEVD 83 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-----HHHHT----CSEEEE-CCT--TTCHHHHHHHSCCCS
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH-----HHHhh----CCeEEE-eeH--HHHHHHHHHHhcCCC
Confidence 357899999999999999999999999999999998751 11221 246667 999 445665554 799
Q ss_pred EEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHHHH
Q 025065 82 GVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 82 ~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
+|||+||...... .... ..|+.+|...+.+
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 163 (249)
T 1o5i_A 84 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGF 163 (249)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHH
Confidence 9999999753311 1111 5799999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHH-HHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc-
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVIL-NLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG- 184 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~- 184 (258)
.+.++.+ +|++++++|||.++++....... .... .+.... ....+.+++|+|++++.++..+. ..|
T Consensus 164 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~----p~~~~~~~~dvA~~i~~l~s~~~~~~tG~ 236 (249)
T 1o5i_A 164 LKTLSFEVAPYGITVNCVAPGWTETERVKELLS---EEKKKQVESQI----PMRRMAKPEEIASVVAFLCSEKASYLTGQ 236 (249)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC---HHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHhhhcCeEEEEEeeCCCccCcccccch---hhHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCccccCCCCC
Confidence 9888776 58999999999999885321111 1111 222221 23458899999999999987542 346
Q ss_pred eEEEeCC
Q 025065 185 RYLLAGS 191 (258)
Q Consensus 185 ~~~~~~~ 191 (258)
.+.+++.
T Consensus 237 ~~~vdgG 243 (249)
T 1o5i_A 237 TIVVDGG 243 (249)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 5566554
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.2e-19 Score=142.35 Aligned_cols=183 Identities=16% Similarity=0.142 Sum_probs=122.7
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
.+++|++|||||+|+||++++++|+++|++|++++|....... ....++...+.++.++++|++|++++.++++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999886433211 1222222234578999999999999888775
Q ss_pred ---CCcEEEecCCCCCCCCC---Cch---------------------------------------------hhHHHHHHH
Q 025065 79 ---GCDGVFHTASPVIFLSD---NPQ---------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~~---~~~---------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||....... ... ..|+.+|..
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 167 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAP 167 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----CH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHHH
Confidence 68999999998643211 111 579999999
Q ss_pred HHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-CCC
Q 025065 108 AEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-KAS 183 (258)
Q Consensus 108 ~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~ 183 (258)
.+.+++.++.+. |+++..+.||.|..+......... ......... ....+..++|+|++++.++... ...
T Consensus 168 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~----~~~r~~~pedvA~~v~~L~s~~~~it 241 (262)
T 3ksu_A 168 VEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE--STAFHKSQA----MGNQLTKIEDIAPIIKFLTTDGWWIN 241 (262)
T ss_dssp HHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------------CCCCSCCGGGTHHHHHHHHTTTTTCC
T ss_pred HHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH--HHHHHHhcC----cccCCCCHHHHHHHHHHHcCCCCCcc
Confidence 999999998875 899999999999765322110000 000000110 3345789999999999998862 245
Q ss_pred c-eEEEeCCCc
Q 025065 184 G-RYLLAGSVA 193 (258)
Q Consensus 184 ~-~~~~~~~~~ 193 (258)
| .+.++|...
T Consensus 242 G~~i~vdGg~~ 252 (262)
T 3ksu_A 242 GQTIFANGGYT 252 (262)
T ss_dssp SCEEEESTTCC
T ss_pred CCEEEECCCcc
Confidence 6 456665543
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=139.33 Aligned_cols=177 Identities=17% Similarity=0.103 Sum_probs=122.0
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
..+++|++|||||+|+||++++++|+++|++|++++|+..... ....++.....++.++++|+++++++.++++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALE-KAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999998753321 1112222223468899999999988877664
Q ss_pred --CCcEEEecCCCC-CCCC---CCch-----------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPV-IFLS---DNPQ-----------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~-~~~~---~~~~-----------------------------------------------~~Y~~sK 105 (258)
++|+|||+||.. .... .... ..|+.+|
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 161 (262)
T 1zem_A 82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK 161 (262)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHH
Confidence 689999999975 2211 1111 5799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCC------------CCccHH-HHHHHHcCCCCCCCCcceeeHHHH
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI------------LNFGAE-VILNLINGDQSFAFPYIFVEIRDV 169 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~------------~~~~~~-~~~~~~~g~~~~~~~~~~i~v~D~ 169 (258)
...+.+.+.++.+ +|+++++++||.+..+..... ...... ....+.... ....+..++|+
T Consensus 162 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dv 237 (262)
T 1zem_A 162 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV----PMRRYGDINEI 237 (262)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS----TTSSCBCGGGS
T ss_pred HHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcC----CCCCCcCHHHH
Confidence 9999998888765 489999999999877632110 000011 111111111 12347789999
Q ss_pred HHHHHHhhcCC--CCCce
Q 025065 170 VYAHIRALEVP--KASGR 185 (258)
Q Consensus 170 a~~~~~~~~~~--~~~~~ 185 (258)
|++++.++... ...|.
T Consensus 238 A~~v~~l~s~~~~~itG~ 255 (262)
T 1zem_A 238 PGVVAFLLGDDSSFMTGV 255 (262)
T ss_dssp HHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHcCchhcCcCCc
Confidence 99999998753 23553
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.4e-18 Score=134.63 Aligned_cols=173 Identities=17% Similarity=0.127 Sum_probs=123.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.++... ....+ ++.++.+|+++++++.++++
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLRE-AAEAV-----GAHPVVMDVADPASVERGFAEALAHLG 76 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999987533211 11111 37889999999998887765
Q ss_pred CCcEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e 109 (258)
++|+|||+||...... .... ..|+.+|...+
T Consensus 77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~Y~asK~a~~ 156 (245)
T 1uls_A 77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVV 156 (245)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCCCchhHHHHHHHHH
Confidence 4899999999753221 1111 56999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 184 (258)
.+.+.++.+ +|+++++++||.+.++..... ............ ....+..++|+|++++.++..+ ...|
T Consensus 157 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~----p~~~~~~~~dvA~~v~~l~s~~~~~~tG 229 (245)
T 1uls_A 157 GLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---PEKVREKAIAAT----PLGRAGKPLEVAYAALFLLSDESSFITG 229 (245)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTC----TTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc---CHHHHHHHHhhC----CCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 998888765 489999999999988753321 111222222221 1234789999999999998754 2356
Q ss_pred -eEEEeCC
Q 025065 185 -RYLLAGS 191 (258)
Q Consensus 185 -~~~~~~~ 191 (258)
.+.+.+.
T Consensus 230 ~~~~vdgG 237 (245)
T 1uls_A 230 QVLFVDGG 237 (245)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 4455543
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.9e-18 Score=135.40 Aligned_cols=169 Identities=21% Similarity=0.198 Sum_probs=120.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+|++|||||+|+||++++++|+++|++|++++|+.++. ...+ ++.++.+|+++ +++.++++ ++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g~i 71 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA----AQSL-----GAVPLPTDLEK-DDPKGLVKRALEALGGL 71 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH----HHHH-----TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHhh-----CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999976431 1111 26789999999 87776553 69
Q ss_pred cEEEecCCCCCCCC---CCch-------------------------------------------------hhHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS---DNPQ-------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 81 d~Vih~a~~~~~~~---~~~~-------------------------------------------------~~Y~~sK~~~ 108 (258)
|+|||+||...... .... ..|+.+|...
T Consensus 72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~ 151 (239)
T 2ekp_A 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL 151 (239)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence 99999999753211 1111 4699999999
Q ss_pred HHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCC
Q 025065 109 EEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KAS 183 (258)
Q Consensus 109 e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 183 (258)
+.+.+.++.+. |++++++|||.+.++...... ........+.... ....+..++|+|++++.++..+ ...
T Consensus 152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~----p~~~~~~~~dvA~~~~~l~s~~~~~~t 226 (239)
T 2ekp_A 152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLR-QNPELYEPITARI----PMGRWARPEEIARVAAVLCGDEAEYLT 226 (239)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHTTC----TTSSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccc-cCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCchhcCCC
Confidence 99999888764 899999999999887532110 0111222222221 2335789999999999998753 235
Q ss_pred c-eEEEeCC
Q 025065 184 G-RYLLAGS 191 (258)
Q Consensus 184 ~-~~~~~~~ 191 (258)
| .+.+++.
T Consensus 227 G~~~~vdgG 235 (239)
T 2ekp_A 227 GQAVAVDGG 235 (239)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 6 4455543
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.6e-18 Score=137.49 Aligned_cols=175 Identities=17% Similarity=0.134 Sum_probs=125.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+... ....++ ..++.++++|+++++++.++++
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA-EAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999998753321 111111 2468899999999998887765
Q ss_pred CCcEEEecCCCCCCCC---CCch--------------------------------------------hhHHHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLS---DNPQ--------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~---~~~~--------------------------------------------~~Y~~sK~~~e~~ 111 (258)
++|+|||+||...... .... ..|+.+|...+.+
T Consensus 80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~Y~asK~a~~~~ 159 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGL 159 (263)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCCCcHHHHHHHHHHHHH
Confidence 5799999999753211 0100 4699999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--CCc-e
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK--ASG-R 185 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~ 185 (258)
.+.++.+ +|+++++++||.+.++..... ............ ....+.+++|+|++++.++..+. ..| .
T Consensus 160 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~----p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~ 232 (263)
T 2a4k_A 160 ARTLALELARKGVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGAS----PLGRAGRPEEVAQAALFLLSEESAYITGQA 232 (263)
T ss_dssp HHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTS----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHhhhhCcEEEEEEeCcCcCchhhhc---CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCccccCCcCCE
Confidence 8888765 489999999999998854321 112222222221 22347899999999999987542 456 4
Q ss_pred EEEeCC
Q 025065 186 YLLAGS 191 (258)
Q Consensus 186 ~~~~~~ 191 (258)
+.+++.
T Consensus 233 i~vdgG 238 (263)
T 2a4k_A 233 LYVDGG 238 (263)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 455544
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-18 Score=142.01 Aligned_cols=168 Identities=17% Similarity=0.154 Sum_probs=117.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ...++.. ....+.++++|++|++++.++++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDA-AAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999997643221 1111111 01235899999999998887764
Q ss_pred -CCcEEEecCCCCCCC-C---CCch-------------------------------------------------hhHHHH
Q 025065 79 -GCDGVFHTASPVIFL-S---DNPQ-------------------------------------------------EWYSLA 104 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~-~---~~~~-------------------------------------------------~~Y~~s 104 (258)
++|+|||+||..... . .... ..|+.+
T Consensus 110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as 189 (281)
T 4dry_A 110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTAT 189 (281)
T ss_dssp SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHH
Confidence 579999999975321 1 1111 679999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC--CCcceeeHHHHHHHHHHhhc
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA--FPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~--~~~~~i~v~D~a~~~~~~~~ 178 (258)
|...+.+++.++.+ +|+++..++||.|.++..... ..+. .... ....+..++|+|++++.++.
T Consensus 190 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s 258 (281)
T 4dry_A 190 KHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM-----------STGVLQANGEVAAEPTIPIEHIAEAVVYMAS 258 (281)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------------------CEEECTTSCEEECCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhh-----------cchhhhhhhcccccCCCCHHHHHHHHHHHhC
Confidence 99999999988876 589999999999987642211 0110 1111 22347899999999999999
Q ss_pred CCCCCce
Q 025065 179 VPKASGR 185 (258)
Q Consensus 179 ~~~~~~~ 185 (258)
++....+
T Consensus 259 ~~~~~~i 265 (281)
T 4dry_A 259 LPLSANV 265 (281)
T ss_dssp SCTTEEE
T ss_pred CCccCcc
Confidence 8876553
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=139.72 Aligned_cols=161 Identities=17% Similarity=0.132 Sum_probs=120.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHH-CCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
++|+||||||+|+||++++++|++ +|++|++++|+.+.... ....+.....++.++.+|+++.+++.++++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQA-AVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHH-HHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHH-HHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999 99999999997543211 111111113468899999999998888776
Q ss_pred CCcEEEecCCCCCCCC--CCc-h----------------------------------------h----------------
Q 025065 79 GCDGVFHTASPVIFLS--DNP-Q----------------------------------------E---------------- 99 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~--~~~-~----------------------------------------~---------------- 99 (258)
++|+|||+||...... ... . .
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET 161 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence 7999999999753211 110 1 1
Q ss_pred ------------------------------hHHHHHHHHHHHHHHHHHH-------cCCcEEEEcCCccccCCcCCCCCc
Q 025065 100 ------------------------------WYSLAKTLAEEAAWKFAKE-------NGIDLVAIHPGTVIGPFFQPILNF 142 (258)
Q Consensus 100 ------------------------------~Y~~sK~~~e~~~~~~~~~-------~~~~~~ilRp~~v~G~~~~~~~~~ 142 (258)
.|+.+|.+.|.+++.++.+ .++++++++||.|.++....
T Consensus 162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---- 237 (276)
T 1wma_A 162 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---- 237 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT----
T ss_pred cchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc----
Confidence 4999999999999888765 58999999999998764221
Q ss_pred cHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC----CCceEEEeC
Q 025065 143 GAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK----ASGRYLLAG 190 (258)
Q Consensus 143 ~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~~~~~~ 190 (258)
..+.+++|+|++++.++..+. ..|.|+..+
T Consensus 238 ------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~ 271 (276)
T 1wma_A 238 ------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 271 (276)
T ss_dssp ------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETT
T ss_pred ------------------cccCChhHhhhhHhhhhcCcccccccCceEeccC
Confidence 126799999999999997552 356565443
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=141.26 Aligned_cols=181 Identities=17% Similarity=0.081 Sum_probs=126.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------G 79 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~ 79 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... ...++.....++.++.+|+++.+++.++++ +
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAA-VQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHH-HHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 567999999999999999999999999999999997755432 112222224578999999999998888775 6
Q ss_pred CcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|++||+||...... .... ..|+.+|...+
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~ 189 (275)
T 4imr_A 110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQH 189 (275)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHH
Confidence 899999999753321 1111 45999999999
Q ss_pred HHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc
Q 025065 110 EAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG 184 (258)
Q Consensus 110 ~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 184 (258)
.+++.++.+. |+++..++||.|.++..................... ....+..++|+|++++.++... ...|
T Consensus 190 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---p~~r~~~pedvA~~v~fL~s~~a~~itG 266 (275)
T 4imr_A 190 NLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN---WMGRAGRPEEMVGAALFLASEACSFMTG 266 (275)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS---TTCSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC---ccCCCcCHHHHHHHHHHHcCcccCCCCC
Confidence 9999988774 899999999999876322110000111111111110 1223678999999999998754 2456
Q ss_pred -eEEEeC
Q 025065 185 -RYLLAG 190 (258)
Q Consensus 185 -~~~~~~ 190 (258)
.+.++|
T Consensus 267 ~~i~vdG 273 (275)
T 4imr_A 267 ETIFLTG 273 (275)
T ss_dssp CEEEESS
T ss_pred CEEEeCC
Confidence 445544
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.78 E-value=6.5e-18 Score=137.80 Aligned_cols=176 Identities=19% Similarity=0.173 Sum_probs=123.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC-CCccchhhcccc-CcCCcEEEEEccCCC----cccHHHHhC-
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP-NSPKTEHLRELD-GATERLHLFKANLLE----EGSFDSAVD- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~~~Dl~~----~~~~~~~~~- 78 (258)
|++|++|||||+|+||++++++|+++|++|++++|+. +... ....++. ....++.++++|+++ ++++.++++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAV-SLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHH-HHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence 5678999999999999999999999999999999976 3221 1111111 113468899999999 777776664
Q ss_pred ------CCcEEEecCCCCCCCCC------C------ch------------------------------------------
Q 025065 79 ------GCDGVFHTASPVIFLSD------N------PQ------------------------------------------ 98 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~~~~------~------~~------------------------------------------ 98 (258)
++|+|||+||....... + ..
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i 179 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179 (288)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 68999999997532111 1 00
Q ss_pred ------------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcce
Q 025065 99 ------------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIF 163 (258)
Q Consensus 99 ------------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (258)
..|+.+|...+.+.+.++.+ .|+++++++||.|+++. . .. ......+.... ....+
T Consensus 180 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~---~~~~~~~~~~~----p~~r~ 250 (288)
T 2x9g_A 180 CDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG---EEEKDKWRRKV----PLGRR 250 (288)
T ss_dssp CCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC---HHHHHHHHHTC----TTTSS
T ss_pred ecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC---hHHHHHHHhhC----CCCCC
Confidence 45999999999999888876 38999999999999986 2 11 11222222221 12234
Q ss_pred -eeHHHHHHHHHHhhcCC--CCCce-EEEeCC
Q 025065 164 -VEIRDVVYAHIRALEVP--KASGR-YLLAGS 191 (258)
Q Consensus 164 -i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 191 (258)
..++|+|++++.++... ...|. +.+.|.
T Consensus 251 ~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 282 (288)
T 2x9g_A 251 EASAEQIADAVIFLVSGSAQYITGSIIKVDGG 282 (288)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence 79999999999999753 34564 445443
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-18 Score=136.55 Aligned_cols=150 Identities=17% Similarity=0.096 Sum_probs=113.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
.++|++|||||+|+||++++++|+++|++|++++|+..... ....++.+|+++++++.++++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 73 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLG 73 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999999865431 135678899999988887764
Q ss_pred --CCcEEEecCCCCCCCCC--C-c-h---------------------------------------------hhHHHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSD--N-P-Q---------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~--~-~-~---------------------------------------------~~Y~~sK~~ 107 (258)
++|+|||+||....... + . . ..|+.+|..
T Consensus 74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 153 (241)
T 1dhr_A 74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGA 153 (241)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHH
Confidence 68999999997542211 1 1 1 579999999
Q ss_pred HHHHHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 108 AEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 108 ~e~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
.+.+++.++.+ .|+++++++||.+-++.. ....... ....++..+|+|++++.++....
T Consensus 154 ~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~-----------~~~~~~~----~~~~~~~~~~vA~~v~~l~~~~~ 217 (241)
T 1dhr_A 154 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------RKSMPEA----DFSSWTPLEFLVETFHDWITGNK 217 (241)
T ss_dssp HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------HHHSTTS----CGGGSEEHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHhccCCCCeEEEEEecCcccCccc-----------cccCcch----hhccCCCHHHHHHHHHHHhcCCC
Confidence 99999988765 359999999999865421 1111111 12346788999999999997643
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=136.79 Aligned_cols=155 Identities=19% Similarity=0.164 Sum_probs=111.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCC----cEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGC----DGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----d~V 83 (258)
||++|||||+|+||++++++|+++|++|++++|+.+.... ....+ ..++.++.+|+++.+++.++++.+ |+|
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l 76 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLST-VTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPSTV 76 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence 3679999999999999999999999999999997643221 11111 356889999999999999988654 999
Q ss_pred EecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 84 FHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 84 ih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
||+||...... .... ..|+.+|...+.+++.
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 156 (230)
T 3guy_A 77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIES 156 (230)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHHHH
Confidence 99999754321 1111 6799999999999999
Q ss_pred HHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 115 FAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 115 ~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
++.+. |+++..++||.+..+...... ... ....++.++|+|++++.++..+.
T Consensus 157 la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~~----~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 157 VRLELKGKPMKIIAVYPGGMATEFWETSG-----------KSL----DTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp HHHHTTTSSCEEEEEEECCC-------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred HHHHHHhcCeEEEEEECCcccChHHHhcC-----------CCC----CcccCCCHHHHHHHHHHHHhCcC
Confidence 98874 799999999999766422110 000 23457899999999999988653
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.3e-18 Score=138.68 Aligned_cols=177 Identities=15% Similarity=0.116 Sum_probs=124.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC---EEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC--
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY---TVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
+++|++|||||+|+||++++++|+++|+ +|++.+|+.+.... ...++.. ...++.++++|++|++++.++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEE-LKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHH-HHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4678999999999999999999999987 99999987643221 1111111 13468899999999999998875
Q ss_pred -----CCcEEEecCCCCCC-CC---CCch-----------------------------------------------hhHH
Q 025065 79 -----GCDGVFHTASPVIF-LS---DNPQ-----------------------------------------------EWYS 102 (258)
Q Consensus 79 -----~~d~Vih~a~~~~~-~~---~~~~-----------------------------------------------~~Y~ 102 (258)
++|+|||+||.... .. .... ..|+
T Consensus 110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~ 189 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYC 189 (287)
T ss_dssp CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHH
T ss_pred HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHH
Confidence 47999999997532 11 1111 6799
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+|...+.+.+.++.+ +|++++.++||.|.++.................. ...++.++|+|++++.++..
T Consensus 190 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-------~~~p~~pedvA~~v~~l~s~ 262 (287)
T 3rku_A 190 ASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYK-------DTTPLMADDVADLIVYATSR 262 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHT-------TSCCEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhc-------ccCCCCHHHHHHHHHHHhCC
Confidence 9999999999999887 5899999999999876421100111111222222 12355999999999999987
Q ss_pred CCC--Cc-eEEEeC
Q 025065 180 PKA--SG-RYLLAG 190 (258)
Q Consensus 180 ~~~--~~-~~~~~~ 190 (258)
+.. .| .++..+
T Consensus 263 ~~~~i~g~~i~v~~ 276 (287)
T 3rku_A 263 KQNTVIADTLIFPT 276 (287)
T ss_dssp CTTEEEEEEEEEET
T ss_pred CCCeEecceEEeeC
Confidence 653 33 454443
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-18 Score=140.31 Aligned_cols=160 Identities=15% Similarity=0.065 Sum_probs=116.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCc-CCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGA-TERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++++||||||+|+||++++++|+++|++|++++|+...... ....+... ..++.++.+|+++.+++.++++
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQK-VVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999997643221 11111110 1368899999999988887664
Q ss_pred -CCcEEEec-CCCCCCCCC--Cch----------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHT-ASPVIFLSD--NPQ----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~-a~~~~~~~~--~~~----------------------------------------------~~Y~~sK~~~ 108 (258)
++|+|||+ |+....... ... +.|+.+|...
T Consensus 105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 184 (286)
T 1xu9_A 105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFAL 184 (286)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHHHHH
Confidence 69999999 565432111 111 5799999999
Q ss_pred HHHHHHHHHHc-----CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 109 EEAAWKFAKEN-----GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 109 e~~~~~~~~~~-----~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.+++.++.+. ++++++++||.+.++... ....+. ....+++++|+|+.++.+++.+.
T Consensus 185 ~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~-----------~~~~~~----~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 185 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-----------KAVSGI----VHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-----------HHSCGG----GGGGCBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH-----------Hhcccc----ccCCCCCHHHHHHHHHHHHhcCC
Confidence 99998877654 899999999998765311 111111 12347899999999999998753
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-17 Score=131.60 Aligned_cols=185 Identities=16% Similarity=0.195 Sum_probs=130.9
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|...+++|++|||||++.||++++++|.++|.+|++.+|+.+... ....+.....++.++++|++++++++++++
T Consensus 1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA--FLDALAQRQPRATYLPVELQDDAQCRDAVAQTI 78 (258)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH--HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH--HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHH
Confidence 566778999999999999999999999999999999999876532 222222234678999999999988877654
Q ss_pred ----CCcEEEecCCCCCCCCCCch------------------------------------------------hhHHHHHH
Q 025065 79 ----GCDGVFHTASPVIFLSDNPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~~~~~------------------------------------------------~~Y~~sK~ 106 (258)
++|++||+||.......+.. ..|+.+|.
T Consensus 79 ~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKa 158 (258)
T 4gkb_A 79 ATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKG 158 (258)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHHHH
Confidence 68999999998543222111 68999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC---ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN---FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
..+.+.+.++.+ +|+++..+-||.|..+....... ........+....+ ..+.+..++|+|.+++.++...
T Consensus 159 av~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p---lg~R~g~peeiA~~v~fLaS~~ 235 (258)
T 4gkb_A 159 AQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVP---LGRRFTTPDEIADTAVFLLSPR 235 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCT---TTTSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCC---CCCCCcCHHHHHHHHHHHhCch
Confidence 999999988876 58999999999998764332111 01111222222211 1134778999999999998643
Q ss_pred --CCCce-EEEeCC
Q 025065 181 --KASGR-YLLAGS 191 (258)
Q Consensus 181 --~~~~~-~~~~~~ 191 (258)
...|. ..++|.
T Consensus 236 a~~iTG~~i~VDGG 249 (258)
T 4gkb_A 236 ASHTTGEWLFVDGG 249 (258)
T ss_dssp GTTCCSCEEEESTT
T ss_pred hcCccCCeEEECCC
Confidence 34664 455443
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.3e-18 Score=136.26 Aligned_cols=165 Identities=24% Similarity=0.272 Sum_probs=108.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc---HHHHh---CC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAV---DG 79 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~---~~ 79 (258)
+++|++|||||+|+||++++++|.+ |+.|++++|+..... .+.+ ..++.++.+|+++.+. +.+.+ .+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~--~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLA--ALAE----IEGVEPIESDIVKEVLEEGGVDKLKNLDH 75 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHH--HHHT----STTEEEEECCHHHHHHTSSSCGGGTTCSC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHH--HHHh----hcCCcceecccchHHHHHHHHHHHHhcCC
Confidence 3578999999999999999999987 999999998753321 1111 2468899999988732 22222 36
Q ss_pred CcEEEecCCCCCCCCCC--c-h----------------------------------------------hhHHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSDN--P-Q----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~~--~-~----------------------------------------------~~Y~~sK~~~e~ 110 (258)
+|+|||+||........ . . ..|+.+|...+.
T Consensus 76 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 155 (245)
T 3e9n_A 76 VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRG 155 (245)
T ss_dssp CSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHHHHHHHH
Confidence 89999999986432211 1 0 679999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCceEE
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYL 187 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~ 187 (258)
+++.++.+ .|+++.+++||.+.++...... ...... + ....+++++|+|++++.++..+....+++
T Consensus 156 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~---~-~~~~~~~p~dvA~~i~~l~~~~~~~~~~~ 224 (245)
T 3e9n_A 156 LADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM-------DSQGTN---F-RPEIYIEPKEIANAIRFVIDAGETTQITN 224 (245)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCC---------------------------CCGGGSCHHHHHHHHHHHHTSCTTEEEEE
T ss_pred HHHHHHHHhhhcCeEEEEEecCCccCchhhhhh-------hhhhcc---c-ccccCCCHHHHHHHHHHHHcCCCccceee
Confidence 99998876 5899999999999887432211 000000 1 23458899999999999999876555554
Q ss_pred E
Q 025065 188 L 188 (258)
Q Consensus 188 ~ 188 (258)
+
T Consensus 225 i 225 (245)
T 3e9n_A 225 V 225 (245)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.7e-18 Score=135.50 Aligned_cols=178 Identities=19% Similarity=0.069 Sum_probs=128.2
Q ss_pred CCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhC----
Q 025065 6 GEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
+++|++|||||+ |+||++++++|+++|++|++++|+..+...+...++.. .+.++.++++|+++++++.++++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA 97 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence 467899999999 99999999999999999999998876542222222211 13578999999999998887764
Q ss_pred ---CCcEEEecCCCCCCCCC---Cch-------------------------------------------------hhHHH
Q 025065 79 ---GCDGVFHTASPVIFLSD---NPQ-------------------------------------------------EWYSL 103 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~~---~~~-------------------------------------------------~~Y~~ 103 (258)
++|+|||+||....... ... ..|+.
T Consensus 98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~ 177 (267)
T 3gdg_A 98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNV 177 (267)
T ss_dssp HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchH
Confidence 57999999998643211 111 46999
Q ss_pred HHHHHHHHHHHHHHHcC--CcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 104 AKTLAEEAAWKFAKENG--IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
+|...+.+++.++.+.+ +++..+.||.+..+..... .......+.... ....+.+++|+|++++.++...
T Consensus 178 sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~----~~~r~~~~~dva~~~~~l~s~~~ 250 (267)
T 3gdg_A 178 AKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV---PKETQQLWHSMI----PMGRDGLAKELKGAYVYFASDAS 250 (267)
T ss_dssp HHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS---CHHHHHHHHTTS----TTSSCEETHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC---CHHHHHHHHhcC----CCCCCcCHHHHHhHhheeecCcc
Confidence 99999999999988754 7899999999987643321 111222222222 3456889999999999999753
Q ss_pred -CCCc-eEEEeC
Q 025065 181 -KASG-RYLLAG 190 (258)
Q Consensus 181 -~~~~-~~~~~~ 190 (258)
...| .+.++|
T Consensus 251 ~~itG~~i~vdg 262 (267)
T 3gdg_A 251 TYTTGADLLIDG 262 (267)
T ss_dssp TTCCSCEEEEST
T ss_pred ccccCCEEEECC
Confidence 3456 445554
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=133.93 Aligned_cols=164 Identities=18% Similarity=0.231 Sum_probs=122.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC---CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG---YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
+++|+||||||+|+||++++++|+++| ++|++++|+...... +.++.....++.++.+|+++.+++.++++
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~--~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE--LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH--HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH--HHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence 467899999999999999999999999 999999998765422 22221113478999999999999988876
Q ss_pred -----CCcEEEecCCCCC-CCC----------------------------------------C-----C-----------
Q 025065 79 -----GCDGVFHTASPVI-FLS----------------------------------------D-----N----------- 96 (258)
Q Consensus 79 -----~~d~Vih~a~~~~-~~~----------------------------------------~-----~----------- 96 (258)
++|+|||+||... ... . .
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 7999999999743 100 0 0
Q ss_pred --------chhhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceee
Q 025065 97 --------PQEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVE 165 (258)
Q Consensus 97 --------~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~ 165 (258)
....|+.+|...+.+++.++.+ ++++++++|||.|.++.... ..++.
T Consensus 177 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------~~~~~ 234 (267)
T 1sny_A 177 SIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------------------SAPLD 234 (267)
T ss_dssp CSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----------------------TCSBC
T ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----------------------CCCCC
Confidence 0146999999999999988876 58999999999997654211 12568
Q ss_pred HHHHHHHHHHhhcCCC--CCceEE-EeCCCc
Q 025065 166 IRDVVYAHIRALEVPK--ASGRYL-LAGSVA 193 (258)
Q Consensus 166 v~D~a~~~~~~~~~~~--~~~~~~-~~~~~~ 193 (258)
++|+|+.++.++.... ..|.|+ ..+..+
T Consensus 235 ~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~ 265 (267)
T 1sny_A 235 VPTSTGQIVQTISKLGEKQNGGFVNYDGTPL 265 (267)
T ss_dssp HHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred HHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence 8999999999987542 355553 344443
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=133.35 Aligned_cols=169 Identities=20% Similarity=0.191 Sum_probs=120.2
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc------hhhccccCcCCcEEEEEccCCCcccHHHHhC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT------EHLRELDGATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
.+++|++|||||+|+||++++++|.++|++|++++|+..+... .....+...+.++.++++|+++++++.++++
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 3578999999999999999999999999999999998754211 1111111124578999999999998887765
Q ss_pred -------CCcEEEecCCCCCCCC---CCch-------------------------------------------------h
Q 025065 79 -------GCDGVFHTASPVIFLS---DNPQ-------------------------------------------------E 99 (258)
Q Consensus 79 -------~~d~Vih~a~~~~~~~---~~~~-------------------------------------------------~ 99 (258)
++|++||+||...... .... .
T Consensus 83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~ 162 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHT 162 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCH
T ss_pred HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCc
Confidence 6899999999853321 1111 3
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCc-cccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 100 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGT-VIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~-v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
.|+.+|...+.+++.++.+ +|+++..+.||. +-.+.. +...+. ....+..++|+|++++.
T Consensus 163 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~------------~~~~~~----~~~~~~~pedvA~~v~~ 226 (274)
T 3e03_A 163 GYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI------------NMLPGV----DAAACRRPEIMADAAHA 226 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------CC----CGGGSBCTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh------------hhcccc----cccccCCHHHHHHHHHH
Confidence 4999999999999988876 489999999995 433211 111111 22336789999999999
Q ss_pred hhcCCC--CCceEEEe
Q 025065 176 ALEVPK--ASGRYLLA 189 (258)
Q Consensus 176 ~~~~~~--~~~~~~~~ 189 (258)
++.... ..|.++..
T Consensus 227 l~s~~~~~itG~~i~~ 242 (274)
T 3e03_A 227 VLTREAAGFHGQFLID 242 (274)
T ss_dssp HHTSCCTTCCSCEEEH
T ss_pred HhCccccccCCeEEEc
Confidence 997643 35655443
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.8e-18 Score=134.54 Aligned_cols=175 Identities=17% Similarity=0.157 Sum_probs=121.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+|++|||||+|+||++++++|+++| +.|++.+|+...... ..... ..++.++++|++|++++.++++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKK-LKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHH-HHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHH-HHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999885 788888886533211 11111 3468999999999998887765
Q ss_pred CCcEEEecCCCCCC-C---CCCch----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIF-L---SDNPQ----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~-~---~~~~~----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||.... . ..... ..|+.+|...
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 157 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAAL 157 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHHHHH
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHHHHH
Confidence 68999999998432 1 11111 6899999999
Q ss_pred HHHHHHHHHHc-CCcEEEEcCCccccCCcCCCCC------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 109 EEAAWKFAKEN-GIDLVAIHPGTVIGPFFQPILN------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 109 e~~~~~~~~~~-~~~~~ilRp~~v~G~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.+.+.++.+. ++++..++||.+.++....... ........+.... ....+.+++|+|++++.++....
T Consensus 158 ~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~r~~~p~dva~~v~~L~s~~~ 233 (254)
T 3kzv_A 158 NHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK----ENNQLLDSSVPATVYAKLALHGI 233 (254)
T ss_dssp HHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH----TTC----CHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH----hcCCcCCcccHHHHHHHHHhhcc
Confidence 99999998775 8999999999999875432211 0112222221111 33458899999999999987652
Q ss_pred ---CCceE-EEeC
Q 025065 182 ---ASGRY-LLAG 190 (258)
Q Consensus 182 ---~~~~~-~~~~ 190 (258)
..|.+ ..++
T Consensus 234 ~~~itG~~i~vdg 246 (254)
T 3kzv_A 234 PDGVNGQYLSYND 246 (254)
T ss_dssp CGGGTTCEEETTC
T ss_pred cCCCCccEEEecC
Confidence 45644 4444
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-16 Score=125.66 Aligned_cols=174 Identities=17% Similarity=0.095 Sum_probs=127.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~ 82 (258)
+++|++|||||++.||++++++|.++|++|++.+|+.+.... ....++..+++|++|+++++++++ ++|+
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi 81 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------PRHPRIRREELDITDSQRLQRLFEALPRLDV 81 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------CCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------hhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 478999999999999999999999999999999998754322 113578899999999999888775 6899
Q ss_pred EEecCCCCCCCCCCch-----------------------------------------------hhHHHHHHHHHHHHHHH
Q 025065 83 VFHTASPVIFLSDNPQ-----------------------------------------------EWYSLAKTLAEEAAWKF 115 (258)
Q Consensus 83 Vih~a~~~~~~~~~~~-----------------------------------------------~~Y~~sK~~~e~~~~~~ 115 (258)
+||+||.......... ..|+.||.....+.+.+
T Consensus 82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~l 161 (242)
T 4b79_A 82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSL 161 (242)
T ss_dssp EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999998543211111 68999999999999988
Q ss_pred HHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc-eEEEe
Q 025065 116 AKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLA 189 (258)
Q Consensus 116 ~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~ 189 (258)
+.+ +|+++..+-||.|..|...... ........+.... +...+..++|+|.+++.++... ...| ...++
T Consensus 162 A~Ela~~gIrVNaV~PG~i~T~m~~~~~-~~~~~~~~~~~~~----PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VD 236 (242)
T 4b79_A 162 ACEYAAERIRVNAIAPGWIDTPLGAGLK-ADVEATRRIMQRT----PLARWGEAPEVASAAAFLCGPGASFVTGAVLAVD 236 (242)
T ss_dssp HHHHGGGTEEEEEEEECSBCCC-----C-CCHHHHHHHHHTC----TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred HHHhhhcCeEEEEEEeCCCCChhhhccc-CCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhcCccCceEEEC
Confidence 876 4899999999999877433221 1222333333332 2234678999999999998653 3466 34554
Q ss_pred CC
Q 025065 190 GS 191 (258)
Q Consensus 190 ~~ 191 (258)
|.
T Consensus 237 GG 238 (242)
T 4b79_A 237 GG 238 (242)
T ss_dssp TT
T ss_pred cc
Confidence 43
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.7e-17 Score=128.40 Aligned_cols=167 Identities=16% Similarity=0.053 Sum_probs=122.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+|+||||||++.||++++++|+++|++|.+.+|+.+.. .++.....++.++++|++++++++++++ ++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS-----ADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999875332 2222234578999999999988887654 68
Q ss_pred cEEEecCCCCCCCC---CCch----------------------------------------------hhHHHHHHHHHHH
Q 025065 81 DGVFHTASPVIFLS---DNPQ----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 81 d~Vih~a~~~~~~~---~~~~----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
|++||+||...... .... ..|+.+|.....+
T Consensus 77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~l 156 (247)
T 3ged_A 77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVAL 156 (247)
T ss_dssp CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHH
Confidence 99999999854321 1111 6899999999999
Q ss_pred HHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCceE-EE
Q 025065 112 AWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRY-LL 188 (258)
Q Consensus 112 ~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~-~~ 188 (258)
.+.++.+. ++++..+-||.|-.+.... . ........ +...+..++|+|.+++.++......|.. .+
T Consensus 157 tk~lA~ela~~IrVN~I~PG~i~t~~~~~---~----~~~~~~~~----Pl~R~g~pediA~~v~fL~s~~~iTG~~i~V 225 (247)
T 3ged_A 157 THALAMSLGPDVLVNCIAPGWINVTEQQE---F----TQEDCAAI----PAGKVGTPKDISNMVLFLCQQDFITGETIIV 225 (247)
T ss_dssp HHHHHHHHTTTSEEEEEEECSBCCCC------C----CHHHHHTS----TTSSCBCHHHHHHHHHHHHHCSSCCSCEEEE
T ss_pred HHHHHHHHCCCCEEEEEecCcCCCCCcHH---H----HHHHHhcC----CCCCCcCHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 98888764 7999999999986553221 1 11212211 2234678999999999999876667744 44
Q ss_pred eC
Q 025065 189 AG 190 (258)
Q Consensus 189 ~~ 190 (258)
+|
T Consensus 226 DG 227 (247)
T 3ged_A 226 DG 227 (247)
T ss_dssp ST
T ss_pred Cc
Confidence 44
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-18 Score=135.10 Aligned_cols=174 Identities=18% Similarity=0.176 Sum_probs=121.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccC--CCcccHHHHhC----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANL--LEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl--~~~~~~~~~~~---- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+.+.... ....+.. ...++.++.+|+ ++.+++.++++
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQ-VASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999987643221 1111111 123678999999 88887777664
Q ss_pred ---CCcEEEecCCCCCC----CCCCch-----------------------------------------------hhHHHH
Q 025065 79 ---GCDGVFHTASPVIF----LSDNPQ-----------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~----~~~~~~-----------------------------------------------~~Y~~s 104 (258)
++|+|||+||.... ....+. ..|+.+
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 168 (252)
T 3f1l_A 89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAAS 168 (252)
T ss_dssp HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHH
Confidence 68999999997422 111111 679999
Q ss_pred HHHHHHHHHHHHHHcC--CcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-
Q 025065 105 KTLAEEAAWKFAKENG--IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK- 181 (258)
Q Consensus 105 K~~~e~~~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~- 181 (258)
|...+.+.+.++.+.+ +++..+.||.|..+. ........ ....+..++|+|.++++++....
T Consensus 169 K~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~-----------~~~~~~~~----~~~~~~~p~dva~~~~~L~s~~~~ 233 (252)
T 3f1l_A 169 KFATEGMMQVLADEYQQRLRVNCINPGGTRTAM-----------RASAFPTE----DPQKLKTPADIMPLYLWLMGDDSR 233 (252)
T ss_dssp HHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH-----------HHHHCTTC----CGGGSBCTGGGHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEecCcccCch-----------hhhhCCcc----chhccCCHHHHHHHHHHHcCcccc
Confidence 9999999999988764 899999999986542 11111111 22346789999999999987643
Q ss_pred -CCc-eEEEe-CCCcCH
Q 025065 182 -ASG-RYLLA-GSVAQH 195 (258)
Q Consensus 182 -~~~-~~~~~-~~~~t~ 195 (258)
..| .+.++ |...++
T Consensus 234 ~itG~~i~vdgG~~~~~ 250 (252)
T 3f1l_A 234 RKTGMTFDAQPGRKPGI 250 (252)
T ss_dssp TCCSCEEESSCC-----
T ss_pred CCCCCEEEeCCCcCCCC
Confidence 456 44544 333333
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.5e-17 Score=132.99 Aligned_cols=178 Identities=12% Similarity=0.016 Sum_probs=123.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+...... .... ...++.++++|+++++++.++++
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRE-LEVA---HGGNAVGVVGDVRSLQDQKRAAERCLAAFG 78 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHH---TBTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHH-HHHH---cCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999999999987543211 1111 13578999999999988877664
Q ss_pred CCcEEEecCCCCCCCC------CCc-----h-------------------------------------------hhHHHH
Q 025065 79 GCDGVFHTASPVIFLS------DNP-----Q-------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~------~~~-----~-------------------------------------------~~Y~~s 104 (258)
++|++||+||...... .+. . ..|+.+
T Consensus 79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 158 (281)
T 3zv4_A 79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTAT 158 (281)
T ss_dssp CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHH
T ss_pred CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHH
Confidence 6899999999853211 010 0 579999
Q ss_pred HHHHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccH-------HHHHHHHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 105 KTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGA-------EVILNLINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 105 K~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
|...+.+.+.++.+. ++++..+.||.|..+.......... .....+.... ....+..++|+|++++.
T Consensus 159 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~f 234 (281)
T 3zv4_A 159 KHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVL----PIGRMPALEEYTGAYVF 234 (281)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTC----TTSSCCCGGGGSHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcC----CCCCCCCHHHHHHHHHH
Confidence 999999999998774 3999999999998774322110000 0111111111 23457899999999999
Q ss_pred hhcCCC---CCc-eEEEeCC
Q 025065 176 ALEVPK---ASG-RYLLAGS 191 (258)
Q Consensus 176 ~~~~~~---~~~-~~~~~~~ 191 (258)
++..+. ..| .+.++|.
T Consensus 235 L~s~~~~~~itG~~i~vdGG 254 (281)
T 3zv4_A 235 FATRGDSLPATGALLNYDGG 254 (281)
T ss_dssp HHSTTTSTTCSSCEEEESSS
T ss_pred hhcccccccccCcEEEECCC
Confidence 998332 466 4455543
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.6e-17 Score=135.29 Aligned_cols=171 Identities=17% Similarity=0.209 Sum_probs=123.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc------hhhccccCcCCcEEEEEccCCCcccHHHHhC-
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT------EHLRELDGATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
+++|++|||||+|+||++++++|+++|++|++++|+..+... ....++.....++.++++|++|++++.++++
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 467899999999999999999999999999999998765321 1112222224578999999999998887765
Q ss_pred ------CCcEEEecCCCCCCCC---CCch-------------------------------------------------hh
Q 025065 79 ------GCDGVFHTASPVIFLS---DNPQ-------------------------------------------------EW 100 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~~~---~~~~-------------------------------------------------~~ 100 (258)
++|+|||+||...... .... ..
T Consensus 123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~ 202 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCA 202 (346)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchH
Confidence 7999999999854321 1111 46
Q ss_pred HHHHHHHHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 101 YSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
|+.+|...+.+++.++.+. ++++..+.|+.+.... +. +...+.. ....+..++|+|++++.++.
T Consensus 203 Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~----------~~-~~~~~~~---~~~r~~~pedvA~~v~~L~s 268 (346)
T 3kvo_A 203 YTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA----------AM-DMLGGPG---IESQCRKVDIIADAAYSIFQ 268 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH----------HH-HHHCC-----CGGGCBCTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH----------HH-Hhhcccc---ccccCCCHHHHHHHHHHHHh
Confidence 9999999999999988874 7999999999633221 11 1222221 22346789999999999998
Q ss_pred CCC-CCceEEEeC
Q 025065 179 VPK-ASGRYLLAG 190 (258)
Q Consensus 179 ~~~-~~~~~~~~~ 190 (258)
... ..|.+++.+
T Consensus 269 ~~~~itG~~ivdg 281 (346)
T 3kvo_A 269 KPKSFTGNFVIDE 281 (346)
T ss_dssp SCTTCCSCEEEHH
T ss_pred cCCCCCceEEECC
Confidence 732 366555544
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.75 E-value=4e-17 Score=129.79 Aligned_cols=181 Identities=19% Similarity=0.110 Sum_probs=127.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||++.||++++++|.++|.+|++.+|+.+... +..+++...+.++.++++|++++++++++++
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~-~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLN-QIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999998764332 2222333335678999999999998887664
Q ss_pred CCcEEEecCCCCCC-CC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIF-LS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~-~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||.... .. .... ..|+.+|..
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaa 163 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG 163 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHH
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHH
Confidence 58999999997532 11 1111 679999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KA 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 182 (258)
...+.+.++.+ +|+++..+-||.|-.+....................+ ....+..++|+|.+++.++... ..
T Consensus 164 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~---~~~R~g~pediA~~v~fLaSd~a~~i 240 (254)
T 4fn4_A 164 LIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS---LSSRLAEPEDIANVIVFLASDEASFV 240 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT---TCCCCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC---CCCCCcCHHHHHHHHHHHhCchhcCC
Confidence 99999888876 4899999999999876432222212111222111111 1123668999999999998643 34
Q ss_pred CceE-EEeC
Q 025065 183 SGRY-LLAG 190 (258)
Q Consensus 183 ~~~~-~~~~ 190 (258)
.|.. .++|
T Consensus 241 TG~~i~VDG 249 (254)
T 4fn4_A 241 NGDAVVVDG 249 (254)
T ss_dssp CSCEEEEST
T ss_pred cCCEEEeCC
Confidence 6644 4443
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7.1e-18 Score=135.21 Aligned_cols=166 Identities=14% Similarity=0.054 Sum_probs=111.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC----CcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG----CDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d~V 83 (258)
||++|||||+|+||++++++|+++|++|++++|+..+... . +.+|+++.+++.++++. +|+|
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~-~~~Dl~~~~~v~~~~~~~~~~id~l 66 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------D-LSTAEGRKQAIADVLAKCSKGMDGL 66 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------C-TTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------c-cccCCCCHHHHHHHHHHhCCCCCEE
Confidence 3689999999999999999999999999999997644211 1 56899999999988854 5999
Q ss_pred EecCCCCC-CCCC-------------------------------------------------------------------
Q 025065 84 FHTASPVI-FLSD------------------------------------------------------------------- 95 (258)
Q Consensus 84 ih~a~~~~-~~~~------------------------------------------------------------------- 95 (258)
||+||... ....
T Consensus 67 v~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (257)
T 1fjh_A 67 VLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHA 146 (257)
T ss_dssp EECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTC
T ss_pred EECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcc
Confidence 99999754 1100
Q ss_pred C---chhhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHH
Q 025065 96 N---PQEWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDV 169 (258)
Q Consensus 96 ~---~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~ 169 (258)
. ....|+.+|.+.+.+++.++.+ +|+++++++||.+.++........ ......... ... ....+.+++|+
T Consensus 147 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~-~~~-~~~~~~~~~dv 222 (257)
T 1fjh_A 147 GEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD--PRYGESIAK-FVP-PMGRRAEPSEM 222 (257)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------CCC-STTSCCCTHHH
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc--hhHHHHHHh-ccc-ccCCCCCHHHH
Confidence 0 0035999999999999888765 589999999999988753321000 001111110 001 22357899999
Q ss_pred HHHHHHhhcCC--CCCc-eEEEeCC
Q 025065 170 VYAHIRALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 170 a~~~~~~~~~~--~~~~-~~~~~~~ 191 (258)
|++++.++..+ ...| .+.+++.
T Consensus 223 A~~~~~l~~~~~~~~tG~~~~vdgG 247 (257)
T 1fjh_A 223 ASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHhCchhcCCcCCEEEECCC
Confidence 99999999765 3456 4455544
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=133.62 Aligned_cols=173 Identities=16% Similarity=0.051 Sum_probs=113.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
||++|||||+|+||++++++|+++|++|++++|+.+.... ...+.....++..+ |.+++.++++ ++
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~i 73 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE--LEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQV 73 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH--HHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH--HHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence 3689999999999999999999999999999987654321 11111111233333 4555555443 78
Q ss_pred cEEEecCCCC-CCCC---CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 81 DGVFHTASPV-IFLS---DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 81 d~Vih~a~~~-~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
|+|||+||.. .... .... ..|+.+|...+
T Consensus 74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 153 (254)
T 1zmt_A 74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGAC 153 (254)
T ss_dssp CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHH
Confidence 9999999985 3211 1111 57999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC-----ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN-----FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
.+++.++.+ +|+++++++||.|+|+....... ........+.... ....+..++|+|++++.++..+.
T Consensus 154 ~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~----p~~~~~~p~dvA~~v~~l~s~~~ 229 (254)
T 1zmt_A 154 TLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT----ALQRLGTQKELGELVAFLASGSC 229 (254)
T ss_dssp HHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS----SSSSCBCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC----CCCCCcCHHHHHHHHHHHhCccc
Confidence 999988876 48999999999998875432210 0011111111111 22347899999999999987643
Q ss_pred --CCc-eEEEeCC
Q 025065 182 --ASG-RYLLAGS 191 (258)
Q Consensus 182 --~~~-~~~~~~~ 191 (258)
..| .+.+++.
T Consensus 230 ~~~tG~~~~vdgG 242 (254)
T 1zmt_A 230 DYLTGQVFWLAGG 242 (254)
T ss_dssp GGGTTCEEEESTT
T ss_pred CCccCCEEEECCC
Confidence 356 4455544
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-17 Score=132.36 Aligned_cols=162 Identities=17% Similarity=0.209 Sum_probs=112.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d 81 (258)
|++|||||+|+||++++++|+++|++|++++|+.+.... ...++ ..++.++.+|+++++++.++++ ++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQE-LKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 579999999999999999999999999999987533211 11111 2468899999999999988875 589
Q ss_pred EEEecCCCCC-CC---CCCch-----------------------------------------------hhHHHHHHHHHH
Q 025065 82 GVFHTASPVI-FL---SDNPQ-----------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 82 ~Vih~a~~~~-~~---~~~~~-----------------------------------------------~~Y~~sK~~~e~ 110 (258)
+|||+||... .. ..... ..|+.+|...+.
T Consensus 77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 156 (248)
T 3asu_A 77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_dssp EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence 9999999752 11 11111 579999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCcccc-CCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIG-PFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+++.++.+ +|+++++++||.|.| +................. ....++.++|+|++++.++..+.
T Consensus 157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~-------~~~~~~~p~dvA~~v~~l~s~~~ 224 (248)
T 3asu_A 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY-------QNTVALTPEDVSEAVWWVSTLPA 224 (248)
T ss_dssp HHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------CCBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHH-------hccCCCCHHHHHHHHHHHhcCCc
Confidence 99998876 489999999999984 532110000000000000 11235799999999999998653
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=9.6e-17 Score=133.15 Aligned_cols=176 Identities=19% Similarity=0.124 Sum_probs=124.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEE-cCCCCccchhhcccc-CcCCcEEEEEccCCCcc------------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV-RDPNSPKTEHLRELD-GATERLHLFKANLLEEG------------ 71 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~------------ 71 (258)
+++|++|||||+|+||++++++|+++|++|++++ |+.+.... ...++. ..+.++.++++|+++.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 122 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANA-LSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 122 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence 4578999999999999999999999999999999 76532211 111111 11346899999999999
Q ss_pred -----cHHHHhC-------CCcEEEecCCCCCCC---CCC--------------ch------------------------
Q 025065 72 -----SFDSAVD-------GCDGVFHTASPVIFL---SDN--------------PQ------------------------ 98 (258)
Q Consensus 72 -----~~~~~~~-------~~d~Vih~a~~~~~~---~~~--------------~~------------------------ 98 (258)
++.++++ ++|+|||+||..... ... ..
T Consensus 123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 202 (328)
T 2qhx_A 123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 202 (328)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877765 689999999975321 111 00
Q ss_pred -----------------------------hhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHH
Q 025065 99 -----------------------------EWYSLAKTLAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEV 146 (258)
Q Consensus 99 -----------------------------~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~ 146 (258)
..|+.+|...+.+.+.++.+. |+++++++||.|.++. .. ....
T Consensus 203 ~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~----~~~~ 277 (328)
T 2qhx_A 203 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM----PPAV 277 (328)
T ss_dssp HHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS----CHHH
T ss_pred HhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc----cHHH
Confidence 579999999999999888764 8999999999999876 21 1222
Q ss_pred HHHHHcCCCCCCCCc-ceeeHHHHHHHHHHhhcCC--CCCc-eEEEeCC
Q 025065 147 ILNLINGDQSFAFPY-IFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 147 ~~~~~~g~~~~~~~~-~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 191 (258)
...+....+ .. .+..++|+|++++.++... ...| .+.+++.
T Consensus 278 ~~~~~~~~p----~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 322 (328)
T 2qhx_A 278 WEGHRSKVP----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 322 (328)
T ss_dssp HHHHHTTCT----TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhhCC----CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 333332221 22 4789999999999999643 3456 4455543
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=128.14 Aligned_cols=183 Identities=17% Similarity=0.155 Sum_probs=127.9
Q ss_pred CCCCCCCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHh
Q 025065 1 MMSGEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAV 77 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~ 77 (258)
||+- ++|++|||||+| .||.+++++|.++|++|++.+|+...... ....+.. ...++.++++|+++++++.+++
T Consensus 1 M~~l--~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 77 (256)
T 4fs3_A 1 MLNL--ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKE-LEKLLEQLNQPEAHLYQIDVQSDEEVINGF 77 (256)
T ss_dssp CCCC--TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHGGGTCSSCEEEECCTTCHHHHHHHH
T ss_pred CcCC--CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCCcEEEEEccCCCHHHHHHHH
Confidence 5554 789999999887 89999999999999999999997644322 1111111 1346889999999998887765
Q ss_pred C-------CCcEEEecCCCCCCCC-------CCch---------------------------------------------
Q 025065 78 D-------GCDGVFHTASPVIFLS-------DNPQ--------------------------------------------- 98 (258)
Q Consensus 78 ~-------~~d~Vih~a~~~~~~~-------~~~~--------------------------------------------- 98 (258)
+ ++|++||+||...... ....
T Consensus 78 ~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~ 157 (256)
T 4fs3_A 78 EQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNY 157 (256)
T ss_dssp HHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTT
T ss_pred HHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccc
Confidence 4 6899999999753211 1111
Q ss_pred hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 99 EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 99 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
..|+.+|...+.+.+.++.+ +|+++..+.||.+-.+..... .........+.... +...+..++|+|.+++.
T Consensus 158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~~----Pl~R~g~peevA~~v~f 232 (256)
T 4fs3_A 158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV-GGFNTILKEIKERA----PLKRNVDQVEVGKTAAY 232 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-TTHHHHHHHHHHHS----TTSSCCCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc-cCCHHHHHHHHhcC----CCCCCcCHHHHHHHHHH
Confidence 67999999999999988876 589999999999987643322 11222333332221 22246689999999999
Q ss_pred hhcCC--CCCceE-EEeCC
Q 025065 176 ALEVP--KASGRY-LLAGS 191 (258)
Q Consensus 176 ~~~~~--~~~~~~-~~~~~ 191 (258)
++... ...|.. .++|.
T Consensus 233 L~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 233 LLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhCchhcCccCCEEEECcC
Confidence 98653 346643 44443
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-17 Score=132.50 Aligned_cols=166 Identities=14% Similarity=0.161 Sum_probs=113.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG------ 79 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------ 79 (258)
|+ |++|||||+|+||++++++|+++|++|++++|+.+.... ...++... .++.++.+|+++++++.++++.
T Consensus 20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQA-LAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 44 789999999999999999999999999999987533211 11111111 3688999999999999988764
Q ss_pred -CcEEEecCCCCCC-CC---CCch------------------------------------------------hhHHHHHH
Q 025065 80 -CDGVFHTASPVIF-LS---DNPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 80 -~d~Vih~a~~~~~-~~---~~~~------------------------------------------------~~Y~~sK~ 106 (258)
+|+|||+||.... .. .... ..|+.+|.
T Consensus 97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKa 176 (272)
T 2nwq_A 97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKA 176 (272)
T ss_dssp SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHH
Confidence 5999999997532 11 0000 57999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
..+.+.+.++.+ +|+++++++||.+.++................. ....++.++|+|++++.++..+.
T Consensus 177 a~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~-------~~~~~~~pedvA~~v~~l~s~~~ 247 (272)
T 2nwq_A 177 FVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTY-------AGAHPIQPEDIAETIFWIMNQPA 247 (272)
T ss_dssp HHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------------CCCCBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhh-------ccCCCCCHHHHHHHHHHHhCCCc
Confidence 999999988865 489999999999988743211000000000100 11235799999999999998654
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.73 E-value=7.9e-17 Score=129.35 Aligned_cols=181 Identities=16% Similarity=0.115 Sum_probs=125.0
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|+..+++|++|||||++.||++++++|.++|++|++.+|+.+... +...++ +.++..+++|++++++++++++
T Consensus 23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~-~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLD-AAIAEI---GGGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHc---CCCeEEEEecCCCHHHHHHHHHHHH
Confidence 555578899999999999999999999999999999998754322 112222 3567889999999998887664
Q ss_pred ----CCcEEEecCCCCCCCCCC---ch---------------------------------------------hhHHHHHH
Q 025065 79 ----GCDGVFHTASPVIFLSDN---PQ---------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~~~---~~---------------------------------------------~~Y~~sK~ 106 (258)
++|++||+||........ .. ..|+.+|.
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKa 178 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKA 178 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHH
Confidence 589999999985432211 11 68999999
Q ss_pred HHHHHHHHHHHHc---CCcEEEEcCCccccCCcCCCCCcc----HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 107 LAEEAAWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFG----AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 107 ~~e~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
....+.+.++.+. |+++..+-||.|..+......... ......+.... +...+..++|+|.+++.++..
T Consensus 179 av~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~----PlgR~g~peeiA~~v~FLaSd 254 (273)
T 4fgs_A 179 ALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQV----PMGRVGRAEEVAAAALFLASD 254 (273)
T ss_dssp HHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCc
Confidence 9999999988774 799999999999876432221111 11122222211 223467899999999999965
Q ss_pred C--CCCceE-EEeC
Q 025065 180 P--KASGRY-LLAG 190 (258)
Q Consensus 180 ~--~~~~~~-~~~~ 190 (258)
. ...|.. .++|
T Consensus 255 ~a~~iTG~~i~VDG 268 (273)
T 4fgs_A 255 DSSFVTGAELFVDG 268 (273)
T ss_dssp GGTTCCSCEEEEST
T ss_pred hhcCccCCeEeECc
Confidence 3 346644 4444
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-17 Score=131.62 Aligned_cols=159 Identities=16% Similarity=0.144 Sum_probs=114.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccC--CCcccHHHHhC----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANL--LEEGSFDSAVD---- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl--~~~~~~~~~~~---- 78 (258)
+++|+++||||+|+||++++++|+++|++|++++|+...... ...++.. ...+..++.+|+ ++.+++.++++
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAE-VSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHH-HHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999997644321 1111111 124567777777 88877776654
Q ss_pred ---CCcEEEecCCCCCCCC----CCch-----------------------------------------------hhHHHH
Q 025065 79 ---GCDGVFHTASPVIFLS----DNPQ-----------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~----~~~~-----------------------------------------------~~Y~~s 104 (258)
++|+|||+||...... .... ..|+.+
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 170 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVS 170 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHH
Confidence 6899999999853211 1111 679999
Q ss_pred HHHHHHHHHHHHHH----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 105 KTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
|...+.+++.++.+ .++++..++||.+..+. ........ ....+..++|+|++++.++...
T Consensus 171 K~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~-----------~~~~~~~~----~~~~~~~p~dva~~~~~l~s~~ 235 (247)
T 3i1j_A 171 KFATEGLMQTLADELEGVTAVRANSINPGATRTGM-----------RAQAYPDE----NPLNNPAPEDIMPVYLYLMGPD 235 (247)
T ss_dssp HHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH-----------HHHHSTTS----CGGGSCCGGGGTHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc-----------chhccccc----CccCCCCHHHHHHHHHHHhCch
Confidence 99999999988876 47899999999986542 11111111 2234567999999999998653
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.8e-16 Score=125.79 Aligned_cols=173 Identities=17% Similarity=0.160 Sum_probs=121.4
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||++.||++++++|.++|++|++.+|+..+.. ....++++|+++++++.++++
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL-----------PEELFVEADLTTKEGCAIVAEATRQRL 76 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------CTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC-----------CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 458899999999999999999999999999999999764321 123468899999988877654
Q ss_pred -CCcEEEecCCCCCCCC-----CCch------------------------------------------------hhHHHH
Q 025065 79 -GCDGVFHTASPVIFLS-----DNPQ------------------------------------------------EWYSLA 104 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~-----~~~~------------------------------------------------~~Y~~s 104 (258)
++|++||+||...... .... ..|+.+
T Consensus 77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~as 156 (261)
T 4h15_A 77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAA 156 (261)
T ss_dssp SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHH
T ss_pred CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHH
Confidence 5899999999743211 1111 569999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCC---------CC--ccHHHHHHHHcCCCCCCCCcceeeHHHHH
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI---------LN--FGAEVILNLINGDQSFAFPYIFVEIRDVV 170 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~---------~~--~~~~~~~~~~~g~~~~~~~~~~i~v~D~a 170 (258)
|...+.+.+.++.+ +|+++..+.||.|-.+..... .. .....+...... . +..-+..++|+|
T Consensus 157 Kaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-PlgR~g~peevA 232 (261)
T 4h15_A 157 KAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGG---I-PLGRPAKPEEVA 232 (261)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTC---C-TTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcC---C-CCCCCcCHHHHH
Confidence 99999999988876 589999999999976531100 00 001111111111 1 233477899999
Q ss_pred HHHHHhhcCC--CCCc-eEEEeCCC
Q 025065 171 YAHIRALEVP--KASG-RYLLAGSV 192 (258)
Q Consensus 171 ~~~~~~~~~~--~~~~-~~~~~~~~ 192 (258)
.++++++... ...| .+.++|..
T Consensus 233 ~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 233 NLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHhCchhcCccCcEEEECCcC
Confidence 9999998643 3466 44666543
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.2e-17 Score=129.34 Aligned_cols=173 Identities=17% Similarity=0.092 Sum_probs=113.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh--------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------- 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------- 77 (258)
|++|++|||||+|+||++++++|+++|++|++++|+...... ...++.....++.++++|+++++++.+++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRV-VAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 567899999999999999999999999999999987533211 11111111346889999999998877654
Q ss_pred CCCcEEEecCC--CC--------CCCCCCch----------------------------------------------hhH
Q 025065 78 DGCDGVFHTAS--PV--------IFLSDNPQ----------------------------------------------EWY 101 (258)
Q Consensus 78 ~~~d~Vih~a~--~~--------~~~~~~~~----------------------------------------------~~Y 101 (258)
.++|+|||+|| .. ........ ..|
T Consensus 82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~Y 161 (260)
T 2qq5_A 82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPY 161 (260)
T ss_dssp TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCSSHHH
T ss_pred CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCCCCch
Confidence 35799999994 21 11111110 479
Q ss_pred HHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhc
Q 025065 102 SLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
+.+|...+.+.+.++.+ +|+++++++||.|.++.................... .. ....+..++|+|++++.++.
T Consensus 162 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~pe~va~~v~~l~s 239 (260)
T 2qq5_A 162 GVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQF-KS-AFSSAETTELSGKCVVALAT 239 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC------------------------CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHH-Hh-hhccCCCHHHHHHHHHHHhc
Confidence 99999999999988765 589999999999988753221000000000000000 00 11124689999999999998
Q ss_pred CCC
Q 025065 179 VPK 181 (258)
Q Consensus 179 ~~~ 181 (258)
.+.
T Consensus 240 ~~~ 242 (260)
T 2qq5_A 240 DPN 242 (260)
T ss_dssp CTT
T ss_pred Ccc
Confidence 753
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-17 Score=130.49 Aligned_cols=181 Identities=15% Similarity=0.056 Sum_probs=127.8
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
++++|++|||||++.||++++++|.++|++|++.+|+.+... +...++...+.++..+++|++++++++++++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~-~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLA-ESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHH-HHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 457999999999999999999999999999999998754322 2222232334678999999999998887664
Q ss_pred -CCcEEEecCCCCCCCCCC---ch------------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDN---PQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~---~~------------------------------------------------~~Y~~sK~ 106 (258)
++|++||+||........ .. ..|+.+|.
T Consensus 85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa 164 (255)
T 4g81_D 85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKG 164 (255)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence 589999999986432211 11 68999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
....+.+.++.+ +|+++..+-||.|..+....... .......+.... +...+..++|+|.+++.++... .
T Consensus 165 al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~----Pl~R~g~pediA~~v~fL~S~~a~~ 239 (255)
T 4g81_D 165 GIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE-DKQFDSWVKSST----PSQRWGRPEELIGTAIFLSSKASDY 239 (255)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT-CHHHHHHHHHHS----TTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC-CHHHHHHHHhCC----CCCCCcCHHHHHHHHHHHhCchhCC
Confidence 999999988876 48999999999998764221100 111111111111 2234678999999999988643 3
Q ss_pred CCc-eEEEeCC
Q 025065 182 ASG-RYLLAGS 191 (258)
Q Consensus 182 ~~~-~~~~~~~ 191 (258)
..| .+.++|.
T Consensus 240 iTG~~i~VDGG 250 (255)
T 4g81_D 240 INGQIIYVDGG 250 (255)
T ss_dssp CCSCEEEESTT
T ss_pred CcCCEEEECCC
Confidence 466 4455554
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.7e-16 Score=126.41 Aligned_cols=175 Identities=19% Similarity=0.132 Sum_probs=123.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEE-cCCCCccchhhcccc-CcCCcEEEEEccCCCcc------------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATV-RDPNSPKTEHLRELD-GATERLHLFKANLLEEG------------ 71 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~------------ 71 (258)
+++|++|||||+|+||++++++|+++|++|++++ |+.+.... ...++. ..+.++.++++|+++++
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANA-LSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 85 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHH-HHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence 4678999999999999999999999999999999 76533211 111111 11346899999999999
Q ss_pred -----cHHHHhC-------CCcEEEecCCCCCCC---CCC--------------ch------------------------
Q 025065 72 -----SFDSAVD-------GCDGVFHTASPVIFL---SDN--------------PQ------------------------ 98 (258)
Q Consensus 72 -----~~~~~~~-------~~d~Vih~a~~~~~~---~~~--------------~~------------------------ 98 (258)
++.++++ ++|++||+||..... ... ..
T Consensus 86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 165 (291)
T 1e7w_A 86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 165 (291)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 8877765 689999999975321 111 00
Q ss_pred -----------------------------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHH
Q 025065 99 -----------------------------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEV 146 (258)
Q Consensus 99 -----------------------------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~ 146 (258)
..|+.+|...+.+.+.++.+ +|++++.++||.+..+. . .. ...
T Consensus 166 ~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~--~~~ 240 (291)
T 1e7w_A 166 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP--PAV 240 (291)
T ss_dssp HTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC--HHH
T ss_pred HhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC--HHH
Confidence 57999999999999988776 48999999999997765 2 11 222
Q ss_pred HHHHHcCCCCCCCCc-ceeeHHHHHHHHHHhhcCC--CCCce-EEEeC
Q 025065 147 ILNLINGDQSFAFPY-IFVEIRDVVYAHIRALEVP--KASGR-YLLAG 190 (258)
Q Consensus 147 ~~~~~~g~~~~~~~~-~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 190 (258)
...+.... ... .+..++|+|++++.++... ...|. +.+.+
T Consensus 241 ~~~~~~~~----p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 284 (291)
T 1e7w_A 241 WEGHRSKV----PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 284 (291)
T ss_dssp HHHHHTTC----TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhhC----CCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence 23332221 122 4779999999999999753 34564 45544
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-16 Score=124.42 Aligned_cols=179 Identities=16% Similarity=0.091 Sum_probs=128.3
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDG 82 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~ 82 (258)
++++|++|||||++.||++++++|.++|.+|++.+|+..+. ..+.+.....++..+++|++|++.++++++ ++|+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~---~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDE---TLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHH---HHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHH---HHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 46799999999999999999999999999999999875432 222233335678999999999998888775 4899
Q ss_pred EEecCCCCCCCCCC---ch------------------------------------------------hhHHHHHHHHHHH
Q 025065 83 VFHTASPVIFLSDN---PQ------------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 83 Vih~a~~~~~~~~~---~~------------------------------------------------~~Y~~sK~~~e~~ 111 (258)
+||+||........ .. ..|+.||.....+
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~l 162 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGL 162 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHH
Confidence 99999986432211 11 6799999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCce-
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASGR- 185 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~- 185 (258)
.+.++.+ +|+++..+-||.|-.+...... ........+.... +...+-.++|+|.+++.++... ...|.
T Consensus 163 tr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~-~~~~~~~~~~~~~----PlgR~g~peeiA~~v~fLaSd~a~~iTG~~ 237 (247)
T 4hp8_A 163 TKLLANEWAAKGINVNAIAPGYIETNNTEALR-ADAARNKAILERI----PAGRWGHSEDIAGAAVFLSSAAADYVHGAI 237 (247)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHTTC----TTSSCBCTHHHHHHHHHHTSGGGTTCCSCE
T ss_pred HHHHHHHHhhcCeEEEEEeeCCCCCcchhhcc-cCHHHHHHHHhCC----CCCCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence 9988876 4899999999999766422110 0111222222222 2234678999999999998653 34664
Q ss_pred EEEeCC
Q 025065 186 YLLAGS 191 (258)
Q Consensus 186 ~~~~~~ 191 (258)
+.++|.
T Consensus 238 i~VDGG 243 (247)
T 4hp8_A 238 LNVDGG 243 (247)
T ss_dssp EEESTT
T ss_pred EEECcc
Confidence 444443
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=131.69 Aligned_cols=182 Identities=18% Similarity=0.156 Sum_probs=120.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccc---cCcCCcEEEEEccCCCcccHHHHhCC---
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLREL---DGATERLHLFKANLLEEGSFDSAVDG--- 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~--- 79 (258)
+|+||||||+|+||++++++|+++|++|++++|+...... ..+... .....++.++.+|+++.+++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 5789999999999999999999999999888876544321 111111 01124689999999999999988864
Q ss_pred --CcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 80 --CDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 80 --~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
+|+|||+||...... .... ..|+.||..
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a 161 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA 161 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHH
Confidence 899999999753221 1111 679999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccH-----------HHHHHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGA-----------EVILNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~-----------~~~~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
.+.+++.++.+ +|+++++++||.|.++.......... ..+........ .+..+-.+.++|+|+++
T Consensus 162 ~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pedvA~~i 240 (327)
T 1jtv_A 162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSK-QVFREAAQNPEEVAEVF 240 (327)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHH-HHHHHHCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHH-HhhhhcCCCHHHHHHHH
Confidence 99999988875 68999999999998875332111100 00000000000 00001125899999999
Q ss_pred HHhhcCCCCCceEEEeC
Q 025065 174 IRALEVPKASGRYLLAG 190 (258)
Q Consensus 174 ~~~~~~~~~~~~~~~~~ 190 (258)
+.++..+.....|+.+.
T Consensus 241 ~~l~~~~~~~~~~~tg~ 257 (327)
T 1jtv_A 241 LTALRAPKPTLRYFTTE 257 (327)
T ss_dssp HHHHHCSSCCSEEESCS
T ss_pred HHHHcCCCCCeEEEeCc
Confidence 99998765444565443
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=128.82 Aligned_cols=183 Identities=16% Similarity=0.139 Sum_probs=123.6
Q ss_pred CCCCCCCCcEEEEECC--cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC
Q 025065 1 MMSGEGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
||.. +++|++||||| +|+||++++++|+++|++|++++|+..+........+ ..++.++++|+++++++.++++
T Consensus 1 Mm~~-l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~ 76 (269)
T 2h7i_A 1 MTGL-LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAG 76 (269)
T ss_dssp -CCT-TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHH
T ss_pred Cccc-cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHH
Confidence 5543 57899999999 9999999999999999999999987533111111111 3467889999999998887765
Q ss_pred ----------CCcEEEecCCCCCC-----C---CCCch------------------------------------------
Q 025065 79 ----------GCDGVFHTASPVIF-----L---SDNPQ------------------------------------------ 98 (258)
Q Consensus 79 ----------~~d~Vih~a~~~~~-----~---~~~~~------------------------------------------ 98 (258)
++|+|||+||.... . .....
T Consensus 77 ~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~ 156 (269)
T 2h7i_A 77 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP 156 (269)
T ss_dssp HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT
T ss_pred HHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccC
Confidence 78999999997541 1 11111
Q ss_pred --hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCC----CCcc-H----HHHHHHHcCCCCCCCCccee
Q 025065 99 --EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI----LNFG-A----EVILNLINGDQSFAFPYIFV 164 (258)
Q Consensus 99 --~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~----~~~~-~----~~~~~~~~g~~~~~~~~~~i 164 (258)
..|+.+|...+.+++.++.+ +|+++.+++||.+..+..... .... . .....+.... |..+.+.
T Consensus 157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~rr~~ 233 (269)
T 2h7i_A 157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA---PIGWNMK 233 (269)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC---TTCCCTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccC---CcccCCC
Confidence 57899999999999988776 489999999999976521100 0000 0 0011111111 1111467
Q ss_pred eHHHHHHHHHHhhcCC--CCCceE-EEeC
Q 025065 165 EIRDVVYAHIRALEVP--KASGRY-LLAG 190 (258)
Q Consensus 165 ~v~D~a~~~~~~~~~~--~~~~~~-~~~~ 190 (258)
.++|+|++++.++... ...|.. .++|
T Consensus 234 ~p~dvA~~v~~L~s~~~~~itG~~i~vdG 262 (269)
T 2h7i_A 234 DATPVAKTVCALLSDWLPATTGDIIYADG 262 (269)
T ss_dssp CCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred CHHHHHHHHHHHhCchhccCcceEEEecC
Confidence 8999999999999753 245644 4444
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-15 Score=124.43 Aligned_cols=83 Identities=19% Similarity=0.245 Sum_probs=64.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCc-ccHHHHhC------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEE-GSFDSAVD------ 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~-~~~~~~~~------ 78 (258)
++|++|||||+|+||++++++|+++|++|++++|+...... ...++.. ...++.++.+|++++ +.+.++++
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHE-AVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 56899999999999999999999999999999998654321 1222221 134789999999998 76666554
Q ss_pred -CCcEEEecCCCC
Q 025065 79 -GCDGVFHTASPV 90 (258)
Q Consensus 79 -~~d~Vih~a~~~ 90 (258)
++|+|||+||..
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 799999999985
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=7.2e-16 Score=134.12 Aligned_cols=182 Identities=18% Similarity=0.170 Sum_probs=124.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCE-EEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCC---
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGC--- 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--- 80 (258)
.+++||||||+|+||.+++++|.++|++ |++++|+...... +...++...+.++.++.+|++|++++.++++++
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~ 304 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 304 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 4689999999999999999999999985 8999997643211 111222222457899999999999999988754
Q ss_pred ---cEEEecCCCCCCCC---CCch-------------------------------------------hhHHHHHHHHHHH
Q 025065 81 ---DGVFHTASPVIFLS---DNPQ-------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 81 ---d~Vih~a~~~~~~~---~~~~-------------------------------------------~~Y~~sK~~~e~~ 111 (258)
|+|||+||...... .... ..|+.+|...+.+
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~l 384 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL 384 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHH
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHHH
Confidence 99999999864321 1111 6799999999988
Q ss_pred HHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeCC
Q 025065 112 AWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGS 191 (258)
Q Consensus 112 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~ 191 (258)
...+. ..|+++++++||.+++++.... .....+.. ....+++++|+++++..++..+.. ...+..
T Consensus 385 a~~~~-~~gi~v~~i~pG~~~~~gm~~~------~~~~~~~~-----~g~~~i~~e~~a~~l~~~l~~~~~-~~~v~~-- 449 (486)
T 2fr1_A 385 AQQRR-SDGLPATAVAWGTWAGSGMAEG------PVADRFRR-----HGVIEMPPETACRALQNALDRAEV-CPIVID-- 449 (486)
T ss_dssp HHHHH-HTTCCCEEEEECCBC------------------CTT-----TTEECBCHHHHHHHHHHHHHTTCS-SCEECE--
T ss_pred HHHHH-hcCCeEEEEECCeeCCCcccch------hHHHHHHh-----cCCCCCCHHHHHHHHHHHHhCCCC-eEEEEe--
Confidence 77654 5699999999999987642111 00000000 335689999999999999987543 222222
Q ss_pred CcCHHHHHHHHHH
Q 025065 192 VAQHSDILKFLRE 204 (258)
Q Consensus 192 ~~t~~e~~~~i~~ 204 (258)
+.+..+...+..
T Consensus 450 -~d~~~~~~~~~~ 461 (486)
T 2fr1_A 450 -VRWDRFLLAYTA 461 (486)
T ss_dssp -ECHHHHHHHHTS
T ss_pred -CCHHHHhhhhcc
Confidence 456666655443
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-15 Score=130.40 Aligned_cols=174 Identities=18% Similarity=0.080 Sum_probs=118.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
++++++|||||+|.||.+++++|.++|++|++++|+...... ..... .++.++.+|++|.+++.++++
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~-----~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADK-----VGGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH-----HTCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH-----cCCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999886432211 11111 246789999999999887764
Q ss_pred -C-CcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHH
Q 025065 79 -G-CDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~-~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~ 106 (258)
+ +|+|||+||....... ... ..|+.+|.
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKa 365 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKA 365 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHH
Confidence 3 8999999998643211 111 67999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
..+.+++.++.+ .|++++.+.||.|.++............... . . ....+..++|+|+++..++... .
T Consensus 366 al~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~----~--~-~l~r~g~pedvA~~v~fL~s~~a~~ 438 (454)
T 3u0b_A 366 GMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRR----L--N-SLFQGGQPVDVAELIAYFASPASNA 438 (454)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHH----S--B-TTSSCBCHHHHHHHHHHHHCGGGTT
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHh----h--c-cccCCCCHHHHHHHHHHHhCCccCC
Confidence 998888887765 4899999999999876432210000000111 0 0 2334678999999999998753 3
Q ss_pred CCc-eEEEeCC
Q 025065 182 ASG-RYLLAGS 191 (258)
Q Consensus 182 ~~~-~~~~~~~ 191 (258)
..| ++.++|.
T Consensus 439 itG~~i~vdGG 449 (454)
T 3u0b_A 439 VTGNTIRVCGQ 449 (454)
T ss_dssp CCSCEEEESSS
T ss_pred CCCcEEEECCc
Confidence 456 4455543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-15 Score=131.69 Aligned_cols=184 Identities=17% Similarity=0.095 Sum_probs=128.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCC--Cc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDG--CD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d 81 (258)
.+++||||||+|+||.+++++|.++|+ +|++++|+...... +...++...+.++.++.+|++|.+++.+++++ +|
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld 337 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN 337 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence 468999999999999999999999998 68888987643211 22222333345789999999999999999865 99
Q ss_pred EEEecCCCCCCCC---CCch--------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 82 GVFHTASPVIFLS---DNPQ--------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 82 ~Vih~a~~~~~~~---~~~~--------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
+|||+||...... .... ..|+.+|...+.+.+.
T Consensus 338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~ 417 (511)
T 2z5l_A 338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAER 417 (511)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHH
T ss_pred EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999854321 1100 6799999999999876
Q ss_pred HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeCCCcC
Q 025065 115 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQ 194 (258)
Q Consensus 115 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~t 194 (258)
+ +..|+++++++||.+-+.+... .. ....+.. ....+++++|+++++..++.++.. .++.. .+.
T Consensus 418 ~-~~~gi~v~sv~pG~~~~tgm~~---~~--~~~~~~~------~g~~~l~~e~~a~~l~~al~~~~~--~v~v~--~~d 481 (511)
T 2z5l_A 418 R-RAAGLPATSVAWGLWGGGGMAA---GA--GEESLSR------RGLRAMDPDAAVDALLGAMGRNDV--CVTVV--DVD 481 (511)
T ss_dssp H-HTTTCCCEEEEECCBCSTTCCC---CH--HHHHHHH------HTBCCBCHHHHHHHHHHHHHHTCS--EEEEC--CBC
T ss_pred H-HHcCCcEEEEECCcccCCcccc---cc--cHHHHHh------cCCCCCCHHHHHHHHHHHHhCCCC--EEEEE--eCC
Confidence 5 4569999999999873322111 11 0111111 224578999999999999987532 22322 356
Q ss_pred HHHHHHHHHHhC
Q 025065 195 HSDILKFLREHY 206 (258)
Q Consensus 195 ~~e~~~~i~~~~ 206 (258)
+..+...+....
T Consensus 482 ~~~~~~~~~~~~ 493 (511)
T 2z5l_A 482 WERFAPATNAIR 493 (511)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHhhhcccC
Confidence 777776665543
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.7e-17 Score=134.94 Aligned_cols=127 Identities=17% Similarity=0.114 Sum_probs=94.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-------EEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDG 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (258)
+|||+||||+||||++++..|+++|+ +|+++++.+..... .....+.. ..+.++ +|+++.+++.+++++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~--~~~~~~-~di~~~~~~~~a~~~ 80 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED--CAFPLL-AGLEATDDPKVAFKD 80 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT--TTCTTE-EEEEEESCHHHHTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc--cccccc-CCeEeccChHHHhCC
Confidence 46899999999999999999999886 89998875321111 10111110 112233 688877888899999
Q ss_pred CcEEEecCCCCCCCCCCch---------------------------------------------------hhHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLSDNPQ---------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~~~~---------------------------------------------------~~Y~~sK~~~ 108 (258)
+|+|||+||........+. +.|+.+|+.+
T Consensus 81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~ 160 (327)
T 1y7t_A 81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDH 160 (327)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHH
T ss_pred CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHH
Confidence 9999999998653222222 3588999999
Q ss_pred HHHHHHHHHHcCCcEEEEcCCccccCCcC
Q 025065 109 EEAAWKFAKENGIDLVAIHPGTVIGPFFQ 137 (258)
Q Consensus 109 e~~~~~~~~~~~~~~~ilRp~~v~G~~~~ 137 (258)
|++...+++..|++.+++||++|||++..
T Consensus 161 er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 161 NRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred HHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 99999988888999999999999999754
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.8e-14 Score=117.91 Aligned_cols=184 Identities=16% Similarity=0.074 Sum_probs=115.3
Q ss_pred CCCCCCcEEEEECCc--chHHHHHHHHHHHCCCEEEEEEcCCC---------CccchhhccccCcC--CcEEEEEcc---
Q 025065 3 SGEGEEKVVCVTGAS--GFVASWLVKLLLQRGYTVKATVRDPN---------SPKTEHLRELDGAT--ERLHLFKAN--- 66 (258)
Q Consensus 3 ~~~~~~~~ilItGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~~~~~--~~~~~~~~D--- 66 (258)
.+.+++|++|||||+ |+||++++++|+++|++|++++|++. ....+...++.... .....+.+|
T Consensus 3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T 1d7o_A 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence 444678999999999 99999999999999999999886420 00001111111100 112333333
Q ss_pred -----C----CC--------cccHHHHhC-------CCcEEEecCCCCC--CC---CCCch-------------------
Q 025065 67 -----L----LE--------EGSFDSAVD-------GCDGVFHTASPVI--FL---SDNPQ------------------- 98 (258)
Q Consensus 67 -----l----~~--------~~~~~~~~~-------~~d~Vih~a~~~~--~~---~~~~~------------------- 98 (258)
+ ++ ++++.++++ ++|++||+||... .. .....
T Consensus 83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 162 (297)
T 1d7o_A 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH 162 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence 2 22 556665543 6899999998632 11 11111
Q ss_pred ---------------------------hhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCccccCCcCCCCCccHHHH
Q 025065 99 ---------------------------EWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPILNFGAEVI 147 (258)
Q Consensus 99 ---------------------------~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~ 147 (258)
..|+.+|...+.+.+.++.+ +|+++++++||.+.++..... .......
T Consensus 163 ~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~ 241 (297)
T 1d7o_A 163 FLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-GFIDTMI 241 (297)
T ss_dssp HGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-SHHHHHH
T ss_pred HHHHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc-cccHHHH
Confidence 26999999999999888765 589999999999998864321 1111222
Q ss_pred HHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc-eEEEeCC
Q 025065 148 LNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-RYLLAGS 191 (258)
Q Consensus 148 ~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 191 (258)
....... ....+..++|+|++++.++... ...| .+.+++.
T Consensus 242 ~~~~~~~----p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG 284 (297)
T 1d7o_A 242 EYSYNNA----PIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284 (297)
T ss_dssp HHHHHHS----SSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHhhccC----CCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 2222211 2234679999999999998753 2356 4555544
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-15 Score=121.30 Aligned_cols=170 Identities=16% Similarity=0.110 Sum_probs=115.8
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHH---CCCEEEEEEcCCCCccchhhccccCc--CCcEEEEEccCCCcccHHHHhC-
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQ---RGYTVKATVRDPNSPKTEHLRELDGA--TERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
.+++|++|||||+|+||++++++|++ +|++|++++|+.+.... ...++... ..++.++.+|+++++++.++++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQ-LKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHH-HHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHH-HHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 35678999999999999999999999 89999999997543211 11111110 2468899999999988877653
Q ss_pred --------CCc--EEEecCCCCCC--C---C-CCch--------------------------------------------
Q 025065 79 --------GCD--GVFHTASPVIF--L---S-DNPQ-------------------------------------------- 98 (258)
Q Consensus 79 --------~~d--~Vih~a~~~~~--~---~-~~~~-------------------------------------------- 98 (258)
++| +|||+||.... . . ....
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~ 161 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence 368 99999997532 0 0 1111
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCCCCCCCCcceeeHHHHH
Q 025065 99 -----EWYSLAKTLAEEAAWKFAKEN-GIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPYIFVEIRDVV 170 (258)
Q Consensus 99 -----~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~i~v~D~a 170 (258)
..|+.+|...+.+.+.++.+. ++++..+.||.+-.+....... ........+.... ....+..++|+|
T Consensus 162 ~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~p~dvA 237 (259)
T 1oaa_A 162 PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK----SDGALVDCGTSA 237 (259)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH----HTTCSBCHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhh----hcCCcCCHHHHH
Confidence 579999999999999998875 4899999999886542110000 0000111111000 123478999999
Q ss_pred HHHHHhhcC
Q 025065 171 YAHIRALEV 179 (258)
Q Consensus 171 ~~~~~~~~~ 179 (258)
++++.++..
T Consensus 238 ~~v~~l~~~ 246 (259)
T 1oaa_A 238 QKLLGLLQK 246 (259)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999998864
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.60 E-value=7e-15 Score=116.89 Aligned_cols=168 Identities=18% Similarity=0.121 Sum_probs=108.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEE-E--cCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKAT-V--RDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV------- 77 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------- 77 (258)
+|++|||||+|+||++++++|+++|++|+++ + |+.+.... ...++ .+.+. .+.+++.+++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~-~~~~~----~~~~~-----~~~~~v~~~~~~~~~~~ 70 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQR-FESEN----PGTIA-----LAEQKPERLVDATLQHG 70 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHS----TTEEE-----CCCCCGGGHHHHHGGGS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHH-HHHHh----CCCcc-----cCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999998 5 76533211 11111 12222 2444443333
Q ss_pred CCCcEEEecCCCCCC---CC---CCch-----------------------------------------------hhHHHH
Q 025065 78 DGCDGVFHTASPVIF---LS---DNPQ-----------------------------------------------EWYSLA 104 (258)
Q Consensus 78 ~~~d~Vih~a~~~~~---~~---~~~~-----------------------------------------------~~Y~~s 104 (258)
.++|+|||+||.... .. .... ..|+.+
T Consensus 71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 150 (244)
T 1zmo_A 71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPA 150 (244)
T ss_dssp SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHH
T ss_pred CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHH
Confidence 268999999997543 11 1111 579999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCc---CCCCCccHHHHHHHHc-CCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF---QPILNFGAEVILNLIN-GDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~---~~~~~~~~~~~~~~~~-g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
|...+.+++.++.+ +|+++++++||.+..+.. ... ... ........ .. ....+..++|+|++++.++
T Consensus 151 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~-~~~~~~~~~~~----p~~r~~~pe~vA~~v~~l~ 224 (244)
T 1zmo_A 151 RAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDW-ENN-PELRERVDRDV----PLGRLGRPDEMGALITFLA 224 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHH-HHC-HHHHHHHHHHC----TTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccc-cch-HHHHHHHhcCC----CCCCCcCHHHHHHHHHHHc
Confidence 99999999988776 489999999999977642 110 000 11111111 11 1234779999999999999
Q ss_pred cCCC--CCce-EEEeCC
Q 025065 178 EVPK--ASGR-YLLAGS 191 (258)
Q Consensus 178 ~~~~--~~~~-~~~~~~ 191 (258)
.... ..|. +.+.+.
T Consensus 225 s~~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 225 SRRAAPIVGQFFAFTGG 241 (244)
T ss_dssp TTTTGGGTTCEEEESTT
T ss_pred CccccCccCCEEEeCCC
Confidence 7643 3464 455543
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.5e-15 Score=122.55 Aligned_cols=166 Identities=19% Similarity=0.067 Sum_probs=112.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC-------Cccc-hhhccccCcCCcEEEEEccCCCcccHHHHh
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN-------SPKT-EHLRELDGATERLHLFKANLLEEGSFDSAV 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (258)
+++|++|||||+|+||++++++|+++|++|++.++... .... ....++..... ...+|+.+.+++.+++
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~---~~~~D~~~~~~~~~~~ 83 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGEKLV 83 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC---eEEEeCCCHHHHHHHH
Confidence 56789999999999999999999999999999876421 1100 11111111111 2358999998776654
Q ss_pred -------CCCcEEEecCCCCCCCC---CCch-----------------------------------------------hh
Q 025065 78 -------DGCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EW 100 (258)
Q Consensus 78 -------~~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~ 100 (258)
.++|+|||+||...... .... ..
T Consensus 84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~ 163 (319)
T 1gz6_A 84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQAN 163 (319)
T ss_dssp HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHH
Confidence 36899999999864321 1111 57
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 101 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
|+.+|...+.+.+.++.+ +|+++++++||.+ .+...... .. ....++.++|+|.+++.++
T Consensus 164 Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~--~~--------------~~~~~~~p~dvA~~~~~l~ 226 (319)
T 1gz6_A 164 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM--PE--------------DLVEALKPEYVAPLVLWLC 226 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS--CH--------------HHHHHSCGGGTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC--Ch--------------hhhccCCHHHHHHHHHHHh
Confidence 999999999999988876 4899999999987 32211000 00 1123568899999999998
Q ss_pred cCCC-CCc-eEEEeCC
Q 025065 178 EVPK-ASG-RYLLAGS 191 (258)
Q Consensus 178 ~~~~-~~~-~~~~~~~ 191 (258)
..+. ..| .|.+++.
T Consensus 227 s~~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 227 HESCEENGGLFEVGAG 242 (319)
T ss_dssp STTCCCCSCEEEEETT
T ss_pred CchhhcCCCEEEECCC
Confidence 7643 345 4555443
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.9e-14 Score=123.85 Aligned_cols=164 Identities=18% Similarity=0.112 Sum_probs=117.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
++++|||||+|+||.+++++|.++|+ .|++++|+...... +...++...+.++.++.+|++|++++.++++
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 47899999999999999999999998 78888886433221 2222233334678999999999999998885
Q ss_pred CCcEEEecCCCC-CCCC---CCch-------------------------------------------hhHHHHHHHHHHH
Q 025065 79 GCDGVFHTASPV-IFLS---DNPQ-------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 79 ~~d~Vih~a~~~-~~~~---~~~~-------------------------------------------~~Y~~sK~~~e~~ 111 (258)
.+|+|||+||.. .... .... ..|+.+|...+.+
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldal 398 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYLDAL 398 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHHHHHHH
Confidence 379999999986 3221 1111 6799999999988
Q ss_pred HHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCC
Q 025065 112 AWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 112 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
.+.+ +..|++++.+.||.+.+.+...... ....+.. .....+..++.++++..++..+..
T Consensus 399 a~~~-~~~Gi~v~sV~pG~w~~~gm~~~~~----~~~~l~~------~g~~~l~pe~~~~~l~~~l~~~~~ 458 (496)
T 3mje_A 399 AEHR-RSLGLTASSVAWGTWGEVGMATDPE----VHDRLVR------QGVLAMEPEHALGALDQMLENDDT 458 (496)
T ss_dssp HHHH-HHTTCCCEEEEECEESSSCC----------CHHHHH------TTEEEECHHHHHHHHHHHHHHTCS
T ss_pred HHHH-HhcCCeEEEEECCcccCCccccChH----HHHHHHh------cCCCCCCHHHHHHHHHHHHcCCCc
Confidence 8765 4569999999999887654332111 1111111 223467899999999999987653
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=6.4e-14 Score=115.55 Aligned_cols=187 Identities=18% Similarity=0.057 Sum_probs=113.6
Q ss_pred CCCCCCCCcEEEEECC--cchHHHHHHHHHHHCCCEEEEEEcCCC---------CccchhhccccCcC--CcEEEEEcc-
Q 025065 1 MMSGEGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDPN---------SPKTEHLRELDGAT--ERLHLFKAN- 66 (258)
Q Consensus 1 mm~~~~~~~~ilItGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~~~~~--~~~~~~~~D- 66 (258)
||++.+++|++||||| +|+||++++++|+++|++|++++|++. ........++.... ....++.+|
T Consensus 2 M~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 81 (315)
T 2o2s_A 2 AFPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDA 81 (315)
T ss_dssp --CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCT
T ss_pred CCcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccc
Confidence 6666678899999999 899999999999999999999987531 00001111111000 012344443
Q ss_pred -----------CCC--------cccHHHHhC-------CCcEEEecCCCCC--CC---CCCch-----------------
Q 025065 67 -----------LLE--------EGSFDSAVD-------GCDGVFHTASPVI--FL---SDNPQ----------------- 98 (258)
Q Consensus 67 -----------l~~--------~~~~~~~~~-------~~d~Vih~a~~~~--~~---~~~~~----------------- 98 (258)
+++ ++++.++++ ++|++||+||... .. .....
T Consensus 82 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 161 (315)
T 2o2s_A 82 AFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLL 161 (315)
T ss_dssp TCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred cccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence 332 556665543 6899999999642 11 11111
Q ss_pred -----------------------------hhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCccccCCcCCC----CC
Q 025065 99 -----------------------------EWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPFFQPI----LN 141 (258)
Q Consensus 99 -----------------------------~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~----~~ 141 (258)
..|+.+|...+.+.+.++.+ +|+++..++||.|..+..... ..
T Consensus 162 ~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~ 241 (315)
T 2o2s_A 162 QHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEK 241 (315)
T ss_dssp HHHSTTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSS
T ss_pred HHHHHHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccc
Confidence 26999999999998887754 589999999999976531110 00
Q ss_pred cc-HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCceE-EEeCC
Q 025065 142 FG-AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASGRY-LLAGS 191 (258)
Q Consensus 142 ~~-~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~~~~~ 191 (258)
.. ........... ....+..++|+|++++.++... ...|.+ .+.|.
T Consensus 242 ~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 291 (315)
T 2o2s_A 242 SFIDYAIDYSYNNA----PLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG 291 (315)
T ss_dssp CHHHHHHHHHHHHS----SSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred hhHHHHHHHHhccC----CCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence 00 11111111111 1223678999999999998753 345644 55544
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-13 Score=113.83 Aligned_cols=190 Identities=17% Similarity=0.065 Sum_probs=100.2
Q ss_pred CCCCCCCCcEEEEECC--cchHHHHHHHHHHHCCCEEEEEEcCC---------CCccchh------------hccccCcC
Q 025065 1 MMSGEGEEKVVCVTGA--SGFVASWLVKLLLQRGYTVKATVRDP---------NSPKTEH------------LRELDGAT 57 (258)
Q Consensus 1 mm~~~~~~~~ilItGa--~G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~------------~~~~~~~~ 57 (258)
||++.+++|++||||| +|+||++++++|+++|++|++++|++ ....... ..++....
T Consensus 2 m~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 2ptg_A 2 PLPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP 81 (319)
T ss_dssp CCCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-----------------------------
T ss_pred CcccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc
Confidence 7777778899999999 89999999999999999999998642 0000000 00110000
Q ss_pred ---CcEEEEEcc------------CCC--------cccHHHHhC-------CCcEEEecCCCCC--CC---CCCch----
Q 025065 58 ---ERLHLFKAN------------LLE--------EGSFDSAVD-------GCDGVFHTASPVI--FL---SDNPQ---- 98 (258)
Q Consensus 58 ---~~~~~~~~D------------l~~--------~~~~~~~~~-------~~d~Vih~a~~~~--~~---~~~~~---- 98 (258)
....++.+| +++ ++++.++++ ++|++||+||... .. .....
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~ 161 (319)
T 2ptg_A 82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLA 161 (319)
T ss_dssp ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHH
T ss_pred ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHH
Confidence 002444444 333 345665543 6899999999642 11 11111
Q ss_pred ------------------------------------------hhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCccc
Q 025065 99 ------------------------------------------EWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVI 132 (258)
Q Consensus 99 ------------------------------------------~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilRp~~v~ 132 (258)
..|+.+|...+.+++.++.+ +|+++.+++||.|.
T Consensus 162 ~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~ 241 (319)
T 2ptg_A 162 AVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK 241 (319)
T ss_dssp HHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred HHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCcc
Confidence 26999999999998887754 58999999999998
Q ss_pred cCCcCCCCCc-cHHHHHHHHcCC-CCCCCCcceeeHHHHHHHHHHhhcCC--CCCceE-EEeCC
Q 025065 133 GPFFQPILNF-GAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVP--KASGRY-LLAGS 191 (258)
Q Consensus 133 G~~~~~~~~~-~~~~~~~~~~g~-~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~~~~~ 191 (258)
.+........ ...+........ ... ....+..++|+|++++.++... ...|.+ .+.+.
T Consensus 242 T~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 304 (319)
T 2ptg_A 242 SRAASAIGKAGDKTFIDLAIDYSEANA-PLQKELESDDVGRAALFLLSPLARAVTGATLYVDNG 304 (319)
T ss_dssp --------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ChhhhhcccccchhhHHHHHHHHhccC-CCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 7642211000 000000000000 001 1224678999999999998753 345644 55443
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-12 Score=108.11 Aligned_cols=127 Identities=14% Similarity=0.143 Sum_probs=90.2
Q ss_pred CcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCC---------CCccc--hhhccccCcCCcEEEEEccCCCc--c-
Q 025065 8 EKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDP---------NSPKT--EHLRELDGATERLHLFKANLLEE--G- 71 (258)
Q Consensus 8 ~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~--~- 71 (258)
+|++|||||++ .||.+++++|+++|++|++.+|++ ..... ............+.++.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 58999999875 999999999999999999777554 11111 11111011123478888999887 6
Q ss_pred -----------------cHHHHhC-------CCcEEEecCCCCC--CCC---CCch------------------------
Q 025065 72 -----------------SFDSAVD-------GCDGVFHTASPVI--FLS---DNPQ------------------------ 98 (258)
Q Consensus 72 -----------------~~~~~~~-------~~d~Vih~a~~~~--~~~---~~~~------------------------ 98 (258)
++.++++ ++|++||+||... ... ....
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6666543 5899999999742 111 1111
Q ss_pred ---------------------h-hHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCccccC
Q 025065 99 ---------------------E-WYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGP 134 (258)
Q Consensus 99 ---------------------~-~Y~~sK~~~e~~~~~~~~~----~~~~~~ilRp~~v~G~ 134 (258)
. .|+.+|...+.+.+.++.+ +|+++..+.||.|..+
T Consensus 162 ~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred hhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 4 8999999999988877654 5899999999999765
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-13 Score=120.71 Aligned_cols=183 Identities=13% Similarity=0.056 Sum_probs=121.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCE-EEEE-EcCCCC------------ccchhhccccCcCCcEEEEEccCCCccc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYT-VKAT-VRDPNS------------PKTEHLRELDGATERLHLFKANLLEEGS 72 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~-V~~~-~r~~~~------------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 72 (258)
+++++|||||+|.||.+++++|.++|++ |+++ +|+..+ ...+...++...+.++.++.+|++|.++
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 4689999999999999999999999987 5555 776532 1112222232234578999999999999
Q ss_pred HHHHhCC------CcEEEecCCCCCCCCC---Cch---------------------------------------------
Q 025065 73 FDSAVDG------CDGVFHTASPVIFLSD---NPQ--------------------------------------------- 98 (258)
Q Consensus 73 ~~~~~~~------~d~Vih~a~~~~~~~~---~~~--------------------------------------------- 98 (258)
+.++++. +|+|||+||....... ...
T Consensus 330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~ 409 (525)
T 3qp9_A 330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG 409 (525)
T ss_dssp HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence 9988864 6999999998643221 111
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 99 ---EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 99 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
..|+.+|...+.+...+ ...|++++.+.||.+-++.... ... ...+.. .....+..+++++++..
T Consensus 410 ~g~~~YaaaKa~l~~lA~~~-~~~gi~v~sI~pG~~~tgm~~~--~~~---~~~~~~------~g~~~l~pee~a~~l~~ 477 (525)
T 3qp9_A 410 AGQGAYAAGTAFLDALAGQH-RADGPTVTSVAWSPWEGSRVTE--GAT---GERLRR------LGLRPLAPATALTALDT 477 (525)
T ss_dssp TTCHHHHHHHHHHHHHHTSC-CSSCCEEEEEEECCBTTSGGGS--SHH---HHHHHH------TTBCCBCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH-HhCCCCEEEEECCccccccccc--hhh---HHHHHh------cCCCCCCHHHHHHHHHH
Confidence 67999999988875543 3458999999999983221111 111 111111 22346789999999999
Q ss_pred hhcCCCCCceEEEeCCCcCHHHHHHHHHHh
Q 025065 176 ALEVPKASGRYLLAGSVAQHSDILKFLREH 205 (258)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~t~~e~~~~i~~~ 205 (258)
++..+.. ..++ ..+.+..+...+...
T Consensus 478 ~l~~~~~--~v~v--~~~dw~~~~~~~~~~ 503 (525)
T 3qp9_A 478 ALGHGDT--AVTI--ADVDWSSFAPGFTTA 503 (525)
T ss_dssp HHHHTCS--EEEE--CCBCHHHHHHHHHSS
T ss_pred HHhCCCC--eEEE--EeCCHHHHHhhcccc
Confidence 9987532 1222 234566666555443
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.42 E-value=8.7e-13 Score=117.92 Aligned_cols=156 Identities=17% Similarity=-0.000 Sum_probs=101.4
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC-------Cccc-hhhccccCcCCcEEEEEccCCCcccHHHH
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN-------SPKT-EHLRELDGATERLHLFKANLLEEGSFDSA 76 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (258)
.+++|++|||||+|+||++++++|+++|++|++++|... .... ....++..... ...+|+++.+++.++
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~D~~d~~~~~~~ 92 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG---EAVADYNSVIDGAKV 92 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC---CEEECCCCGGGHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC---eEEEEeCCHHHHHHH
Confidence 357899999999999999999999999999999987321 1111 11111111111 234799999888887
Q ss_pred hC-------CCcEEEecCCCCCCCCC---Cch-----------------------------------------------h
Q 025065 77 VD-------GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------E 99 (258)
Q Consensus 77 ~~-------~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~ 99 (258)
++ ++|++||+||....... ... .
T Consensus 93 ~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~ 172 (613)
T 3oml_A 93 IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQV 172 (613)
T ss_dssp HC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCH
T ss_pred HHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCCh
Confidence 75 47999999998643221 111 6
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 100 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.|+.+|...+.+++.++.+ +|+.+..+.|+.+-..... . ... .....+.++|+|.+++.+
T Consensus 173 ~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~-~---~~~-------------~~~~~~~pedvA~~v~~L 235 (613)
T 3oml_A 173 NYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEG-I---LPD-------------ILFNELKPKLIAPVVAYL 235 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CC-C---CCH-------------HHHTTCCGGGTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhh-c---cch-------------hhhhcCCHHHHHHHHHHh
Confidence 7999999999999988876 4899999999864211100 0 000 112345789999999998
Q ss_pred hcCC
Q 025065 177 LEVP 180 (258)
Q Consensus 177 ~~~~ 180 (258)
+...
T Consensus 236 ~s~~ 239 (613)
T 3oml_A 236 CHES 239 (613)
T ss_dssp TSTT
T ss_pred cCCC
Confidence 8765
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.3e-11 Score=117.92 Aligned_cols=166 Identities=16% Similarity=0.067 Sum_probs=111.2
Q ss_pred CCCcEEEEECCcch-HHHHHHHHHHHCCCEEEEEEcCCCCccchhhcc----ccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 6 GEEKVVCVTGASGF-VASWLVKLLLQRGYTVKATVRDPNSPKTEHLRE----LDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
+++|++|||||+|. ||.+++++|+++|++|++++++..........+ ....+.++.++.+|+++.+++.++++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i 752 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 752 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence 56789999999999 999999999999999998854332221111111 11113468899999999998887652
Q ss_pred -----------CCcEEEecCCCCCCC----CCC--ch-------------------------------------------
Q 025065 79 -----------GCDGVFHTASPVIFL----SDN--PQ------------------------------------------- 98 (258)
Q Consensus 79 -----------~~d~Vih~a~~~~~~----~~~--~~------------------------------------------- 98 (258)
++|+|||+||..... ... ..
T Consensus 753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~ 832 (1887)
T 2uv8_A 753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 832 (1887)
T ss_dssp HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence 489999999985322 111 11
Q ss_pred ----hhHHHHHHHHHHH-HHHHHHHcC--CcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHH
Q 025065 99 ----EWYSLAKTLAEEA-AWKFAKENG--IDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVY 171 (258)
Q Consensus 99 ----~~Y~~sK~~~e~~-~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~ 171 (258)
..|+.+|...+.+ .+.++.+.+ ++++.+.||.+.|........... ...... . ..+..++|+|.
T Consensus 833 ~gg~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~----~~~~~~----p-lr~~sPEEVA~ 903 (1887)
T 2uv8_A 833 FGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIA----EGIEKM----G-VRTFSQKEMAF 903 (1887)
T ss_dssp SSCBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTH----HHHHTT----S-CCCEEHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHH----HHHHhc----C-CCCCCHHHHHH
Confidence 5799999999998 555554433 899999999998422111001111 111111 1 13558999999
Q ss_pred HHHHhhcCC
Q 025065 172 AHIRALEVP 180 (258)
Q Consensus 172 ~~~~~~~~~ 180 (258)
+++.++...
T Consensus 904 avlfLaSd~ 912 (1887)
T 2uv8_A 904 NLLGLLTPE 912 (1887)
T ss_dssp HHHGGGSHH
T ss_pred HHHHHhCCC
Confidence 999998764
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.28 E-value=5e-12 Score=119.24 Aligned_cols=166 Identities=16% Similarity=0.096 Sum_probs=109.9
Q ss_pred CCCCcEEEEECCcch-HHHHHHHHHHHCCCEEEEEE-cCCCCccchhhccc----cCcCCcEEEEEccCCCcccHHHHhC
Q 025065 5 EGEEKVVCVTGASGF-VASWLVKLLLQRGYTVKATV-RDPNSPKTEHLREL----DGATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
.+++|++|||||+|. ||.+++++|+++|++|++++ |+..... ....++ ...+.++.++.+|+++.+++.++++
T Consensus 473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~le-e~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe 551 (1688)
T 2pff_A 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVT-DYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE 551 (1688)
T ss_dssp CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTT-THHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHH-HHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence 356789999999998 99999999999999999885 4443322 111222 1113468899999999999887652
Q ss_pred -------------CCcEEEecCCCCCCC----CCC--ch-----------------------------------------
Q 025065 79 -------------GCDGVFHTASPVIFL----SDN--PQ----------------------------------------- 98 (258)
Q Consensus 79 -------------~~d~Vih~a~~~~~~----~~~--~~----------------------------------------- 98 (258)
++|+|||+||..... ... ..
T Consensus 552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA 631 (1688)
T 2pff_A 552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH 631 (1688)
T ss_dssp HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence 489999999975322 111 11
Q ss_pred ------hhHHHHHHHHHHH-HHHHHHHc--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHH
Q 025065 99 ------EWYSLAKTLAEEA-AWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDV 169 (258)
Q Consensus 99 ------~~Y~~sK~~~e~~-~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~ 169 (258)
..|+.+|...+.+ .+.++.+. +++++.+.||.+.|......... ...... .. . ..+..++|+
T Consensus 632 G~~Gg~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~----~~~~l~---~i-p-lR~~sPEEV 702 (1688)
T 2pff_A 632 GTFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNI----IAEGIE---KM-G-VRTFSQKEM 702 (1688)
T ss_dssp TTSSCBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTT----CSTTTS---SS-S-CCCCCCCTT
T ss_pred hccCCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchH----HHHHHH---hC-C-CCCCCHHHH
Confidence 4699999999988 34333332 28888999999875321110000 000000 01 1 124478999
Q ss_pred HHHHHHhhcCC
Q 025065 170 VYAHIRALEVP 180 (258)
Q Consensus 170 a~~~~~~~~~~ 180 (258)
|.+++.++...
T Consensus 703 A~aIlFLaSd~ 713 (1688)
T 2pff_A 703 AFNLLGLLTPE 713 (1688)
T ss_dssp HHHHHHHTSTT
T ss_pred HHHHHHHhCCC
Confidence 99999998765
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.27 E-value=1e-10 Score=104.28 Aligned_cols=165 Identities=15% Similarity=0.064 Sum_probs=107.7
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccC-CCcccHH----HHhCC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL-LEEGSFD----SAVDG 79 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~----~~~~~ 79 (258)
.+++|+++||||++.||++++++|.++|++|++.+|.... ....++......+..+.+|+ .+.+.+. +.+.+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~---~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~ 395 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT---KTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGT 395 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHH---HHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence 3567899999999999999999999999999988763221 11122211123566778888 5543322 22346
Q ss_pred CcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHHHH
Q 025065 80 CDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~~e 109 (258)
+|++||+||...... .... ..|+.||....
T Consensus 396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~ 475 (604)
T 2et6_A 396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGIL 475 (604)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHH
Confidence 999999999854321 1111 57999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC-CCc-
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-ASG- 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~- 184 (258)
.+.+.++.+ +|+++..+.||. -.+. ... .... ...+....+|+|.++..++.... ..|
T Consensus 476 ~lt~~la~El~~~gIrVn~v~PG~-~T~m----~~~---~~~~---------~~~~~~~pe~vA~~v~~L~s~~~~itG~ 538 (604)
T 2et6_A 476 GLSKTMAIEGAKNNIKVNIVAPHA-ETAM----TLS---IMRE---------QDKNLYHADQVAPLLVYLGTDDVPVTGE 538 (604)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------------CCSSCGGGTHHHHHHTTSTTCCCCSC
T ss_pred HHHHHHHHHhCccCeEEEEEcCCC-CCcc----ccc---cCch---------hhccCCCHHHHHHHHHHHhCCccCCCCc
Confidence 998888766 589999999983 2211 000 0000 11234578999999999886533 355
Q ss_pred eEEEe
Q 025065 185 RYLLA 189 (258)
Q Consensus 185 ~~~~~ 189 (258)
.+.++
T Consensus 539 ~~~vd 543 (604)
T 2et6_A 539 TFEIG 543 (604)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 44333
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=4.6e-11 Score=115.64 Aligned_cols=165 Identities=15% Similarity=0.060 Sum_probs=112.3
Q ss_pred CCCcEEEEECCcch-HHHHHHHHHHHCCCEEEEEEcCCCCccch---hh-ccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 6 GEEKVVCVTGASGF-VASWLVKLLLQRGYTVKATVRDPNSPKTE---HL-RELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
++++++|||||+|. ||.+++++|+++|++|++++++....... .+ ..+...+.++.++.+|+++.+++.++++
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i 729 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI 729 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 56789999999999 99999999999999999986543322111 11 1121123468899999999998887653
Q ss_pred ---------CCcEEEecCCCCCCC---CCCc---h---------------------------------------------
Q 025065 79 ---------GCDGVFHTASPVIFL---SDNP---Q--------------------------------------------- 98 (258)
Q Consensus 79 ---------~~d~Vih~a~~~~~~---~~~~---~--------------------------------------------- 98 (258)
.+|+|||+||..... .... .
T Consensus 730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g 809 (1878)
T 2uv9_A 730 YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG 809 (1878)
T ss_dssp HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS
T ss_pred HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC
Confidence 489999999985322 1111 1
Q ss_pred --hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccc-cCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 99 --EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVI-GPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 99 --~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
..|+.+|...+.++..+..+ .+++++.+.||.+- ++.... ........... . ..+..++|+|.+
T Consensus 810 g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-----~~~~~~~~~~~----p-lr~~sPeEVA~a 879 (1878)
T 2uv9_A 810 NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-----NNLVAEGVEKL----G-VRTFSQQEMAFN 879 (1878)
T ss_dssp CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-----HHHTHHHHHTT----T-CCCBCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-----chhhHHHHHhc----C-CCCCCHHHHHHH
Confidence 57999999999987765543 13899999999987 332110 11111222211 1 124589999999
Q ss_pred HHHhhcCC
Q 025065 173 HIRALEVP 180 (258)
Q Consensus 173 ~~~~~~~~ 180 (258)
++.++...
T Consensus 880 vlfLaSd~ 887 (1878)
T 2uv9_A 880 LLGLMAPA 887 (1878)
T ss_dssp HHHHHSHH
T ss_pred HHHHhCCc
Confidence 99988654
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.8e-11 Score=109.48 Aligned_cols=166 Identities=14% Similarity=0.122 Sum_probs=115.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHH-HCCC-EEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCC---
Q 025065 7 EEKVVCVTGASGFVASWLVKLLL-QRGY-TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDG--- 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--- 79 (258)
.++++|||||+|.||+.++++|. ++|. +|++++|+...... +...++...+.++.++.+|++|.+++.++++.
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 46889999999999999999999 7898 58888987433221 22333333356789999999999999988753
Q ss_pred ---CcEEEecCCCCCCCCCCc---h-----------------------------------------hhHHHHHHHHHHHH
Q 025065 80 ---CDGVFHTASPVIFLSDNP---Q-----------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 80 ---~d~Vih~a~~~~~~~~~~---~-----------------------------------------~~Y~~sK~~~e~~~ 112 (258)
+|+|||+|+......... . ..|+.+|...+.+.
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l~iV~~SS~ag~~g~~g~~~YaAaka~~~alA 688 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDVALVLFSSVSGVLGSGGQGNYAAANSFLDALA 688 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTSEEEEEEETHHHHTCSSCHHHHHHHHHHHHHH
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEccHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 699999999864322111 1 67999998888777
Q ss_pred HHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 113 WKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 113 ~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+++. ..|++++.+-||.+-+.+..... .......+.. .....+..++....+..++..+.
T Consensus 689 ~~~~-~~Gi~v~sI~pG~v~t~g~~~~~--~~~~~~~~~~------~g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 689 QQRQ-SRGLPTRSLAWGPWAEHGMASTL--REAEQDRLAR------SGLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp HHHH-HTTCCEEEEEECCCSCCCHHHHH--HHHHHHHHHH------TTBCCCCHHHHHHHHHHHHTSSC
T ss_pred HHHH-HcCCeEEEEECCeECcchhhccc--cHHHHHHHHh------cCCCCCCHHHHHHHHHHHHhCCC
Confidence 6654 56999999999988654311100 0001111111 22345788899999988887754
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=9.6e-11 Score=97.97 Aligned_cols=163 Identities=10% Similarity=-0.029 Sum_probs=111.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHH-CCCEEEEEEcCCCCccch----------hhc-cccCcCCcEEEEEccCCCcccHH
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPNSPKTE----------HLR-ELDGATERLHLFKANLLEEGSFD 74 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~----------~~~-~~~~~~~~~~~~~~Dl~~~~~~~ 74 (258)
.+|++|||||++.||.++++.|++ +|.+|++++|+....... .+. .+...+..+..+.+|+++++++.
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~ 125 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ 125 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 478999999999999999999999 999999998876543210 111 11222346788999999998887
Q ss_pred HHhC-------CCcEEEecCCCCC-------------CCCC------------------------Cch------------
Q 025065 75 SAVD-------GCDGVFHTASPVI-------------FLSD------------------------NPQ------------ 98 (258)
Q Consensus 75 ~~~~-------~~d~Vih~a~~~~-------------~~~~------------------------~~~------------ 98 (258)
++++ ++|++||+||... .... ...
T Consensus 126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~ 205 (405)
T 3zu3_A 126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE 205 (405)
T ss_dssp HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence 7654 5899999998741 1110 001
Q ss_pred --------------------------------------hhHHHHHHHHHHHHHHHHHH---c-CCcEEEEcCCccccCCc
Q 025065 99 --------------------------------------EWYSLAKTLAEEAAWKFAKE---N-GIDLVAIHPGTVIGPFF 136 (258)
Q Consensus 99 --------------------------------------~~Y~~sK~~~e~~~~~~~~~---~-~~~~~ilRp~~v~G~~~ 136 (258)
..|+.+|...+.+.+.++.+ + |+++..+-||.+-.+..
T Consensus 206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s 285 (405)
T 3zu3_A 206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQAS 285 (405)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHH
T ss_pred HHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchh
Confidence 45899999999999888866 4 89999999999876632
Q ss_pred CCCCCccH---HHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 137 QPILNFGA---EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 137 ~~~~~~~~---~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
... +..+ ..+.+.+. .+-..+|+++++..++..
T Consensus 286 ~~i-p~~p~y~~~l~~~mk---------r~G~~Ed~a~~i~~L~sd 321 (405)
T 3zu3_A 286 SAI-PMMPLYLSLLFKVMK---------EKGTHEGCIEQVYSLYKD 321 (405)
T ss_dssp HTS-TTHHHHHHHHHHHHH---------HHTCCCCHHHHHHHHHHH
T ss_pred hcC-CCCcHHHHHHHHHHh---------cCCCcHHHHHHHHHHHhc
Confidence 211 1111 11111111 122456788888888765
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.3e-11 Score=85.13 Aligned_cols=75 Identities=23% Similarity=0.314 Sum_probs=62.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
++++|+|+|+ |++|+.+++.|.+.| ++|++++|++.... .+. ..++.++.+|+.+.+.+.+.++++|+|||
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~--~~~-----~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALA--VLN-----RMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHH--HHH-----TTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHH--HHH-----hCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 3578999999 999999999999999 99999998754321 111 24678899999999999999999999999
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+++.
T Consensus 76 ~~~~ 79 (118)
T 3ic5_A 76 AAPF 79 (118)
T ss_dssp CSCG
T ss_pred CCCc
Confidence 9854
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1e-10 Score=99.19 Aligned_cols=168 Identities=10% Similarity=-0.036 Sum_probs=113.0
Q ss_pred CCcEEEEECCcchHHHH--HHHHHHHCCCEEEEEEcCCCCccc----------hhhc-cccCcCCcEEEEEccCCCcccH
Q 025065 7 EEKVVCVTGASGFVASW--LVKLLLQRGYTVKATVRDPNSPKT----------EHLR-ELDGATERLHLFKANLLEEGSF 73 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~-~~~~~~~~~~~~~~Dl~~~~~~ 73 (258)
.+|++|||||++.||.+ ++++|.++|++|++++|+...... ..+. .....+..+..+.+|+++.+++
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v 138 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK 138 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence 57899999999999999 999999999999999987654321 1111 1111235688999999999888
Q ss_pred HHHhC-------CCcEEEecCCCC-------------CCCCC------------------------Cch-----------
Q 025065 74 DSAVD-------GCDGVFHTASPV-------------IFLSD------------------------NPQ----------- 98 (258)
Q Consensus 74 ~~~~~-------~~d~Vih~a~~~-------------~~~~~------------------------~~~----------- 98 (258)
.++++ ++|++||+||.. ..... ...
T Consensus 139 ~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~ 218 (418)
T 4eue_A 139 DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGG 218 (418)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhH
Confidence 77654 489999999873 00000 000
Q ss_pred ---------------------------------------hhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCccccCC
Q 025065 99 ---------------------------------------EWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIGPF 135 (258)
Q Consensus 99 ---------------------------------------~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilRp~~v~G~~ 135 (258)
..|+.+|...+.+.+.++.+ +|+++.++-||.|-.+.
T Consensus 219 ~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~ 298 (418)
T 4eue_A 219 EDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKA 298 (418)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHH
T ss_pred HHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChh
Confidence 45799999999988887754 58999999999997653
Q ss_pred cCCCCCccH---HHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 136 FQPILNFGA---EVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 136 ~~~~~~~~~---~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
.... +..+ ..+.+.+.. .--.+|+++++..++...-.+|
T Consensus 299 s~~i-p~~p~y~~~~~~~mk~---------~G~~E~v~e~~~~L~sd~~~~g 340 (418)
T 4eue_A 299 SAYI-PTFPLYAAILYKVMKE---------KNIHENCIMQIERMFSEKIYSN 340 (418)
T ss_dssp HHTS-TTHHHHHHHHHHHHHH---------TTCCCCHHHHHHHHHHHTTSSS
T ss_pred hhcC-CCCcHHHHHHHHHHhh---------cCChHHHHHHHHHHhhccccCC
Confidence 2221 1111 111111211 1135678888888887644444
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-10 Score=97.40 Aligned_cols=164 Identities=11% Similarity=-0.013 Sum_probs=111.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHH-CCCEEEEEEcCCCCccch----------hh-ccccCcCCcEEEEEccCCCcccHH
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPNSPKTE----------HL-RELDGATERLHLFKANLLEEGSFD 74 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~----------~~-~~~~~~~~~~~~~~~Dl~~~~~~~ 74 (258)
.+|++|||||++.||.+++++|.+ +|++|++++|+....... .+ ..+...+..+..+.+|+++++.+.
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 368999999999999999999999 999999999876543210 01 122222346888999999998776
Q ss_pred HHh--------CCCcEEEecCCCC-------------CCCCC------------------------Cch-----------
Q 025065 75 SAV--------DGCDGVFHTASPV-------------IFLSD------------------------NPQ----------- 98 (258)
Q Consensus 75 ~~~--------~~~d~Vih~a~~~-------------~~~~~------------------------~~~----------- 98 (258)
+++ .++|++||+||.. ..... ...
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 654 4589999999862 11000 000
Q ss_pred ---------------------------------------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCc
Q 025065 99 ---------------------------------------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFF 136 (258)
Q Consensus 99 ---------------------------------------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~ 136 (258)
..|+.||...+.+.+.++.+ +|+++.++.||.|-.+..
T Consensus 220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~ 299 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS 299 (422)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence 35799999999999888866 489999999999977643
Q ss_pred CCCCCccHH---HHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 137 QPILNFGAE---VILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 137 ~~~~~~~~~---~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
... +..+. ...+.+.. +--.+|+++++..++...
T Consensus 300 ~~i-p~~~~~~~~~~~~m~r---------~G~pEdva~~v~~L~sd~ 336 (422)
T 3s8m_A 300 AAI-PVMPLYISMVYKIMKE---------KGLHEGTIEQLDRLFRER 336 (422)
T ss_dssp GGS-THHHHHHHHHHHHHHH---------TTCCCCHHHHHHHHHHHT
T ss_pred hcC-CCChHHHHHHHhhhcC---------CcChHHHHHHHHHHhcch
Confidence 321 11111 11111111 124567888888887543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.22 E-value=7.7e-11 Score=105.03 Aligned_cols=185 Identities=17% Similarity=0.047 Sum_probs=117.2
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC-------cc-chhhccccCcCCcEEEEEccCCCccc
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS-------PK-TEHLRELDGATERLHLFKANLLEEGS 72 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~ 72 (258)
|+...+++|+++||||++.||++++++|.++|++|++.+|+... .. .....++..... . ..+|+.|.++
T Consensus 1 m~~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~--~-~~~d~~d~~~ 77 (604)
T 2et6_A 1 MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG--V-AVADYNNVLD 77 (604)
T ss_dssp -CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC--E-EEEECCCTTC
T ss_pred CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC--e-EEEEcCCHHH
Confidence 44455678999999999999999999999999999998876411 11 111122211111 2 2357777765
Q ss_pred HHHHh-------CCCcEEEecCCCCCCCC---CCch--------------------------------------------
Q 025065 73 FDSAV-------DGCDGVFHTASPVIFLS---DNPQ-------------------------------------------- 98 (258)
Q Consensus 73 ~~~~~-------~~~d~Vih~a~~~~~~~---~~~~-------------------------------------------- 98 (258)
.++++ .++|++||+||...... ....
T Consensus 78 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~ 157 (604)
T 2et6_A 78 GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN 157 (604)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC
Confidence 55443 36899999999854311 1111
Q ss_pred ---hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCC-CCcceeeHHHHHH
Q 025065 99 ---EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVY 171 (258)
Q Consensus 99 ---~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~v~D~a~ 171 (258)
..|+.+|.....+.+.++.+ +|+++..+.|+ +..+. .... .+ .......++|+|.
T Consensus 158 ~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m-----------~~~~------~~~~~~~~~~pe~vA~ 219 (604)
T 2et6_A 158 FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRM-----------TESI------MPPPMLEKLGPEKVAP 219 (604)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHH-----------HHTT------SCHHHHTTCSHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcc-----------cccc------CChhhhccCCHHHHHH
Confidence 67999999999999888876 48999999996 22110 0000 00 0112357899999
Q ss_pred HHHHhhcCCC-CCc-eEEEeC-------------------CCcCHHHHHHHHHHhC
Q 025065 172 AHIRALEVPK-ASG-RYLLAG-------------------SVAQHSDILKFLREHY 206 (258)
Q Consensus 172 ~~~~~~~~~~-~~~-~~~~~~-------------------~~~t~~e~~~~i~~~~ 206 (258)
+++.++.... ..| .+.+.+ ...+..++.+.+.+..
T Consensus 220 ~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 275 (604)
T 2et6_A 220 LVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEIL 275 (604)
T ss_dssp HHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHT
T ss_pred HHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhh
Confidence 9999887642 234 332221 3467788888777654
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.7e-09 Score=109.80 Aligned_cols=190 Identities=19% Similarity=0.133 Sum_probs=125.7
Q ss_pred CCCcEEEEECCcch-HHHHHHHHHHHCCCEEEEEEcCCCCccc----hhhccccCcCCcEEEEEccCCCcccHHHHh---
Q 025065 6 GEEKVVCVTGASGF-VASWLVKLLLQRGYTVKATVRDPNSPKT----EHLRELDGATERLHLFKANLLEEGSFDSAV--- 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--- 77 (258)
+++|++|||||++. ||.++++.|+++|.+|++.+|+...... ....++......+..+.+|+++++++.+++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 57899999999999 9999999999999999999987654111 111222222346788999999999888763
Q ss_pred -C-------CCcEEEecCCC----CCC-------CCCC---c----h---------------------------------
Q 025065 78 -D-------GCDGVFHTASP----VIF-------LSDN---P----Q--------------------------------- 98 (258)
Q Consensus 78 -~-------~~d~Vih~a~~----~~~-------~~~~---~----~--------------------------------- 98 (258)
+ ++|++|||||. ... ...+ . .
T Consensus 2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence 2 47999999997 111 0011 1 0
Q ss_pred ----------hhHHHHHHHHHHHHHHHHHH--c--CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCccee
Q 025065 99 ----------EWYSLAKTLAEEAAWKFAKE--N--GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFV 164 (258)
Q Consensus 99 ----------~~Y~~sK~~~e~~~~~~~~~--~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i 164 (258)
..|+.||...+.+.+.++.+ . ++.++.+.||.+-+.......... ....... .. ...
T Consensus 2294 ss~~g~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~----~~~~~~~----~~-r~~ 2364 (3089)
T 3zen_D 2294 SPNRGMFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAI----VSAVEEA----GV-TTY 2364 (3089)
T ss_dssp CSSTTSCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTT----HHHHGGG----SC-BCE
T ss_pred CcccccCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhH----HHHHHhc----CC-CCC
Confidence 26999999999999999888 3 588889999998744322111111 1111111 11 223
Q ss_pred eHHHHHHHHHHhhcCCCC---Cc--eE-EEeC---C-CcCHHHHHHHHHH
Q 025065 165 EIRDVVYAHIRALEVPKA---SG--RY-LLAG---S-VAQHSDILKFLRE 204 (258)
Q Consensus 165 ~v~D~a~~~~~~~~~~~~---~~--~~-~~~~---~-~~t~~e~~~~i~~ 204 (258)
..+|+|.+++.++..... .+ .+ .++| . ...+.++...+.+
T Consensus 2365 ~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D 2365 TTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp EHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred CHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence 899999999998864321 22 23 2222 2 4688888876543
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.6e-10 Score=93.86 Aligned_cols=82 Identities=20% Similarity=0.185 Sum_probs=64.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+++++++||||+|++|++++.+|.++|++|++++|+.++... ....+.. ..++.++.+|+++.+++.++++++|+|||
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~-l~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~DvlVn 194 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQA-AADSVNK-RFKVNVTAAETADDASRAEAVKGAHFVFT 194 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHH-HHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHH-HHHHHHh-cCCcEEEEecCCCHHHHHHHHHhCCEEEE
Confidence 467899999999999999999999999999999987543211 1111100 01356788999999999999999999999
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+++.
T Consensus 195 ~ag~ 198 (287)
T 1lu9_A 195 AGAI 198 (287)
T ss_dssp CCCT
T ss_pred CCCc
Confidence 9986
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2.2e-09 Score=92.37 Aligned_cols=79 Identities=22% Similarity=0.286 Sum_probs=61.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
|++++|+|+| +|++|++++++|.+.|++|++.+|+..+. +.+.....++..+.+|+++.+++.++++++|+|||
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a-----~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn 74 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESA-----KKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVIS 74 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHH-----HHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHH-----HHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEE
Confidence 3468999998 79999999999999999999999875332 11111112477889999999899999999999999
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+++..
T Consensus 75 ~a~~~ 79 (450)
T 1ff9_A 75 LIPYT 79 (450)
T ss_dssp CCC--
T ss_pred CCccc
Confidence 99863
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.84 E-value=1e-08 Score=79.51 Aligned_cols=76 Identities=14% Similarity=0.232 Sum_probs=54.8
Q ss_pred CCcEEEEECC----------------cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc
Q 025065 7 EEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70 (258)
Q Consensus 7 ~~~~ilItGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 70 (258)
++|+|||||| +|.+|.+++++|..+|++|+++.|....... .+.++..+ |..+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~--------~~~~~~~~--~v~s~ 71 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE--------PHPNLSIR--EITNT 71 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC--------CCTTEEEE--ECCSH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--------CCCCeEEE--EHhHH
Confidence 4789999999 9999999999999999999999986532210 01245544 44444
Q ss_pred cc----HHHHhCCCcEEEecCCCCCC
Q 025065 71 GS----FDSAVDGCDGVFHTASPVIF 92 (258)
Q Consensus 71 ~~----~~~~~~~~d~Vih~a~~~~~ 92 (258)
++ +.+.+.++|++||+||...+
T Consensus 72 ~em~~~v~~~~~~~Dili~aAAvsD~ 97 (232)
T 2gk4_A 72 KDLLIEMQERVQDYQVLIHSMAVSDY 97 (232)
T ss_dssp HHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred HHHHHHHHHhcCCCCEEEEcCccccc
Confidence 33 33345579999999998654
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=1.3e-08 Score=103.19 Aligned_cols=125 Identities=21% Similarity=0.197 Sum_probs=90.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCE-EEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
.++++|||||+|.||.+++++|.++|++ |++++|+...... ....++...+.++..+.+|+++.+++.++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 4688999999999999999999999986 7777887654321 1222222223568889999999988887654
Q ss_pred -CCcEEEecCCCCCCCC-C--Cch---------------------------------------------hhHHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS-D--NPQ---------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~-~--~~~---------------------------------------------~~Y~~sK~~~e 109 (258)
.+|+|||+||...... . ... ..|+.+|...+
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~ 2042 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAME 2042 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHHHH
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHHHH
Confidence 5899999999753211 0 000 57999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCccc
Q 025065 110 EAAWKFAKENGIDLVAIHPGTVI 132 (258)
Q Consensus 110 ~~~~~~~~~~~~~~~ilRp~~v~ 132 (258)
.+.+... ..|++...+-++.+-
T Consensus 2043 ~l~~~rr-~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A 2043 RICEKRR-HDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp HHHHHHH-HTTSCCCEEEECCBC
T ss_pred HHHHHHH-HCCCcEEEEEccCcC
Confidence 9987644 448988888877653
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.80 E-value=5.8e-09 Score=75.35 Aligned_cols=75 Identities=24% Similarity=0.238 Sum_probs=59.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih 85 (258)
++++|+|+|+ |.+|+.+++.|.++|++|+++++++... +.+.. .++.++.+|.++++.+.++ +.++|+||.
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~--~~~~~-----~~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKI--ELLED-----EGFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHH--HHHHH-----TTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHH--HHHHH-----CCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 4578999998 9999999999999999999999875332 11111 3578899999999888876 467999997
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.+.
T Consensus 77 ~~~~ 80 (141)
T 3llv_A 77 TGSD 80 (141)
T ss_dssp CCSC
T ss_pred ecCC
Confidence 7763
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.77 E-value=5.5e-08 Score=80.18 Aligned_cols=80 Identities=16% Similarity=0.121 Sum_probs=54.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
++|||+||||+||+|+.++..|..+| ++|+++++++.......+..... ...+.. +.+..++.++++++|+||
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~-~~~v~~----~~~t~d~~~al~gaDvVi 81 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDT-GAVVRG----FLGQQQLEAALTGMDLII 81 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCS-SCEEEE----EESHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccc-cceEEE----EeCCCCHHHHcCCCCEEE
Confidence 45799999999999999999999998 89999987654111111111100 011211 223456778899999999
Q ss_pred ecCCCCC
Q 025065 85 HTASPVI 91 (258)
Q Consensus 85 h~a~~~~ 91 (258)
|+|+...
T Consensus 82 ~~ag~~~ 88 (326)
T 1smk_A 82 VPAGVPR 88 (326)
T ss_dssp ECCCCCC
T ss_pred EcCCcCC
Confidence 9999754
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1e-08 Score=74.00 Aligned_cols=75 Identities=23% Similarity=0.175 Sum_probs=57.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih 85 (258)
++++|+|+|+ |.+|+.+++.|.+.|++|+++++++... ..+.. .+...+.+|.++.+.+.++ +.++|+||+
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~-----~~~~~--~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 76 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV-----NAYAS--YATHAVIANATEENELLSLGIRNFEYVIV 76 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH-----HTTTT--TCSEEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHH--hCCEEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence 4678999998 9999999999999999999999864322 11111 2346788999988777765 678999999
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+++.
T Consensus 77 ~~~~ 80 (144)
T 2hmt_A 77 AIGA 80 (144)
T ss_dssp CCCS
T ss_pred CCCC
Confidence 8875
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.8e-08 Score=73.80 Aligned_cols=79 Identities=16% Similarity=0.254 Sum_probs=60.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih 85 (258)
..++|+|+|+ |.+|+.+++.|.+.|++|++++++++... +.+... ...++.++.+|.++++.+.++ +.++|+||-
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~-~~~~~~--~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDI-KQLEQR--LGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHH-HHHHHH--HCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHH-HHHHHh--hcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 4568999997 99999999999999999999998642110 111110 024688999999999988876 789999997
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.+.
T Consensus 78 ~~~~ 81 (153)
T 1id1_A 78 LSDN 81 (153)
T ss_dssp CSSC
T ss_pred ecCC
Confidence 7654
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.75 E-value=4.3e-08 Score=80.94 Aligned_cols=119 Identities=12% Similarity=0.070 Sum_probs=69.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-------EEEEEEcC----CCCccchhhccccCcCCcEEEEEccCCCcccHHH
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRD----PNSPKTEHLRELDGATERLHLFKANLLEEGSFDS 75 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 75 (258)
+.+||+||||+||+|++++..|+..|+ +|+++++. ..... .....+.... ..+ ..|+...+++.+
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~-g~~~dl~~~~--~~~-~~~i~~~~~~~~ 79 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQ-GVMMEIDDCA--FPL-LAGMTAHADPMT 79 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHH-HHHHHHHTTT--CTT-EEEEEEESSHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccch-hhHHHHhhhc--ccc-cCcEEEecCcHH
Confidence 357999999999999999999998885 78888775 21111 1011111100 011 246666677889
Q ss_pred HhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcC-CcEEEEcCCc
Q 025065 76 AVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENG-IDLVAIHPGT 130 (258)
Q Consensus 76 ~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~ilRp~~ 130 (258)
+++++|+|||+|+................-....++++... +++ .+..++-.++
T Consensus 80 al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~-~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 80 AFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAID-AVASRNIKVLVVGN 134 (329)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHH-HHSCTTCEEEECSS
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEccC
Confidence 99999999999998543322222222222233444444433 443 5544444344
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.73 E-value=9.2e-08 Score=79.42 Aligned_cols=84 Identities=10% Similarity=-0.047 Sum_probs=64.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHH-HCCCEEEEEEcCCCCccch-----------hhccccCcCCcEEEEEccCCCcccHH
Q 025065 7 EEKVVCVTGASGFVASWLVKLLL-QRGYTVKATVRDPNSPKTE-----------HLRELDGATERLHLFKANLLEEGSFD 74 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~~~~~~~~Dl~~~~~~~ 74 (258)
.+|++|||||+..+|.+.+.+|. ..|..|+++.+..++.... ..+.+...+.....+.+|+.+++...
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~ 128 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA 128 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence 46899999999999999999998 6789999888766543210 01122222457889999999998888
Q ss_pred HHhC-------CCcEEEecCCCC
Q 025065 75 SAVD-------GCDGVFHTASPV 90 (258)
Q Consensus 75 ~~~~-------~~d~Vih~a~~~ 90 (258)
++++ ++|++||++|..
T Consensus 129 ~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 129 QVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHhcCCCCEEEEecccc
Confidence 7764 589999999975
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=4.6e-08 Score=75.72 Aligned_cols=74 Identities=15% Similarity=0.125 Sum_probs=55.6
Q ss_pred CCCcEEEEECC----------------cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC
Q 025065 6 GEEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69 (258)
Q Consensus 6 ~~~~~ilItGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 69 (258)
+++|+|||||| +|.+|.+++++|.++|++|+++++...-. . +.+++ .+|+.+
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~-~---------~~g~~--~~dv~~ 73 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-T---------PPFVK--RVDVMT 73 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-C---------CTTEE--EEECCS
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc-c---------CCCCe--EEccCc
Confidence 56899999999 69999999999999999999988754211 0 12333 467777
Q ss_pred cccHHHH----hCCCcEEEecCCCCC
Q 025065 70 EGSFDSA----VDGCDGVFHTASPVI 91 (258)
Q Consensus 70 ~~~~~~~----~~~~d~Vih~a~~~~ 91 (258)
.+++.+. +.++|++||+||...
T Consensus 74 ~~~~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 74 ALEMEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp HHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred HHHHHHHHHHhcCCCCEEEECCcccC
Confidence 6554433 456999999999854
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.69 E-value=1.2e-08 Score=86.66 Aligned_cols=80 Identities=11% Similarity=0.078 Sum_probs=61.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC---CEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhCC--Cc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG---YTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVDG--CD 81 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~--~d 81 (258)
|++|+|+|| |++|+.+++.|.+.| .+|++.+|+.++... ....+.. .+.++..+.+|+++.+++.+++++ +|
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~-la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQE-IAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHH-HHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHH-HHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 368999999 999999999999988 389999987654322 1111110 013578899999999999999987 99
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+|||+++.
T Consensus 79 vVin~ag~ 86 (405)
T 4ina_A 79 IVLNIALP 86 (405)
T ss_dssp EEEECSCG
T ss_pred EEEECCCc
Confidence 99999875
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.65 E-value=4.2e-08 Score=70.40 Aligned_cols=76 Identities=13% Similarity=0.149 Sum_probs=56.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih 85 (258)
++|+|+|+|+ |++|+.+++.|.+.|++|+++++++... +.+.. ..++..+.+|..+.+.+.+. +.++|+||+
T Consensus 3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~--~~~~~----~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC--KKASA----EIDALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHH----HCSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH--HHHHH----hcCcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 3578999997 9999999999999999999999865322 11111 01456788999888777654 678999999
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 76 ~~~~ 79 (140)
T 1lss_A 76 VTGK 79 (140)
T ss_dssp CCSC
T ss_pred eeCC
Confidence 8754
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-07 Score=69.46 Aligned_cols=81 Identities=17% Similarity=0.196 Sum_probs=59.0
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCC
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGC 80 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~ 80 (258)
|+....+++|+|+|+ |.+|+.+++.|.+.|++|++++|++..... +.. ..+...+.+|..+++.+.+. +.++
T Consensus 13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~--~~~----~~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR--LNS----EFSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG--SCT----TCCSEEEESCTTSHHHHHTTTGGGC
T ss_pred hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH--HHh----cCCCcEEEecCCCHHHHHHcCcccC
Confidence 444456789999997 999999999999999999999987644311 110 12456778898887766655 6789
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+||.+.+.
T Consensus 86 d~Vi~~~~~ 94 (155)
T 2g1u_A 86 DMVFAFTND 94 (155)
T ss_dssp SEEEECSSC
T ss_pred CEEEEEeCC
Confidence 999988765
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.61 E-value=3.7e-08 Score=84.91 Aligned_cols=78 Identities=18% Similarity=0.226 Sum_probs=61.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+++++|+|+|+ |++|+.+++.|.+. |++|++.+|+.++.. .+... .++..+.+|+.+.+++.++++++|+||
T Consensus 21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~--~la~~----~~~~~~~~D~~d~~~l~~~l~~~DvVI 93 (467)
T 2axq_A 21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQ--ALAKP----SGSKAISLDVTDDSALDKVLADNDVVI 93 (467)
T ss_dssp --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHH--HHHGG----GTCEEEECCTTCHHHHHHHHHTSSEEE
T ss_pred CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHH--HHHHh----cCCcEEEEecCCHHHHHHHHcCCCEEE
Confidence 45789999998 99999999999998 789999998754321 11111 245677899999988999999999999
Q ss_pred ecCCCC
Q 025065 85 HTASPV 90 (258)
Q Consensus 85 h~a~~~ 90 (258)
|+++..
T Consensus 94 n~tp~~ 99 (467)
T 2axq_A 94 SLIPYT 99 (467)
T ss_dssp ECSCGG
T ss_pred ECCchh
Confidence 998863
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.60 E-value=7.4e-08 Score=80.78 Aligned_cols=73 Identities=12% Similarity=0.059 Sum_probs=58.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
+.|||+|.|| |++|+.+++.|.+ .++|++.+++.+.. +.. .+.+..+..|+.|.+++.++++++|+||++
T Consensus 15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~-----~~~---~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENL-----EKV---KEFATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHH-----HHH---TTTSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHH-----HHH---hccCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 4578999999 9999999998865 58999988865332 111 234677889999999999999999999999
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
++.
T Consensus 85 ~p~ 87 (365)
T 3abi_A 85 LPG 87 (365)
T ss_dssp CCG
T ss_pred cCC
Confidence 865
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=7.5e-07 Score=72.97 Aligned_cols=116 Identities=18% Similarity=0.089 Sum_probs=62.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC--EEEEEEc--CCCCccc--hhhcccc-CcCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVR--DPNSPKT--EHLRELD-GATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~--~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
|||+||||+||+|++++..|+.+|. ++..+++ +...... ..+.... .....+++... .+++.++++++|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~----~d~l~~al~gaD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVE----SDENLRIIDESD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEE----ETTCGGGGTTCS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeC----CcchHHHhCCCC
Confidence 4899999999999999999998884 6777776 3211100 0011110 00112222221 123566789999
Q ss_pred EEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 82 GVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 82 ~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
+|||+|+............+...-....++++. +.+++ +..++-.++
T Consensus 77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~-i~~~~-~~~vlv~SN 123 (313)
T 1hye_A 77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKK-IAEIC-DTKIFVITN 123 (313)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHH-HHHHC-CCEEEECSS
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHH-HHHhC-CeEEEEecC
Confidence 999999985432222222222222333344443 33445 555544333
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.39 E-value=2.5e-07 Score=75.51 Aligned_cols=110 Identities=15% Similarity=0.033 Sum_probs=59.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC--EEEEEEc--CCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVR--DPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
|||+||||+|++|+.++..|+..+. ++..+++ +...... ..+.........++... + + .+.++++|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence 4899999999999999999998875 6777776 3211100 00111000012233332 1 1 345889999
Q ss_pred EEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 83 VFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 83 Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
|||+|+............+...-....++++. ..+++.+..++
T Consensus 74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~-i~~~~p~~~vi 116 (303)
T 1o6z_A 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSS-LDEHNDDYISL 116 (303)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHH-HHTTCSCCEEE
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHCCCcEEE
Confidence 99999975432222222222222233334333 33455555555
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.32 E-value=5.7e-07 Score=69.74 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=58.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a 87 (258)
|+|+|+|+ |.+|+++++.|.++|++|+++++++.... .+.. ..+..++.+|.++++.+.++ +.++|+||-+.
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~--~l~~----~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCE--EFAK----KLKATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHH--HHHH----HSSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH--HHHH----HcCCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence 47999997 99999999999999999999998764321 1111 12568899999999988876 67899999665
Q ss_pred CC
Q 025065 88 SP 89 (258)
Q Consensus 88 ~~ 89 (258)
+.
T Consensus 74 ~~ 75 (218)
T 3l4b_C 74 PR 75 (218)
T ss_dssp SC
T ss_pred CC
Confidence 44
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.30 E-value=9.2e-07 Score=63.59 Aligned_cols=74 Identities=19% Similarity=0.146 Sum_probs=58.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~ 86 (258)
.++|+|.|+ |.+|+.+++.|.+.|++|+++++++.... .+.. .++..+.+|.++++.+.++ +.++|+||-+
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~--~~~~-----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVD--ELRE-----RGVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHH--HHHH-----TTCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHH--HHHH-----cCCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 457999997 99999999999999999999998764331 1211 3678899999999888765 5679999966
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
...
T Consensus 79 ~~~ 81 (140)
T 3fwz_A 79 IPN 81 (140)
T ss_dssp CSC
T ss_pred CCC
Confidence 654
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.28 E-value=5.4e-07 Score=67.87 Aligned_cols=75 Identities=12% Similarity=0.110 Sum_probs=58.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH--hCCCcEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA--VDGCDGV 83 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~~~d~V 83 (258)
.+++|+|+|+ |.+|+.+++.|.+. |++|+++++++... ..+.. .++..+.+|.++.+.+.++ +.++|+|
T Consensus 38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~--~~~~~-----~g~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAA--QQHRS-----EGRNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHH--HHHHH-----TTCCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHH--HHHHH-----CCCCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 4568999995 99999999999999 99999999876432 11211 3567788999998877776 7789999
Q ss_pred EecCCC
Q 025065 84 FHTASP 89 (258)
Q Consensus 84 ih~a~~ 89 (258)
|.+.+.
T Consensus 110 i~~~~~ 115 (183)
T 3c85_A 110 LLAMPH 115 (183)
T ss_dssp EECCSS
T ss_pred EEeCCC
Confidence 977654
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2.4e-07 Score=74.24 Aligned_cols=36 Identities=22% Similarity=0.353 Sum_probs=29.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHH-CCCEEEEEEcC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRD 41 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~-~g~~V~~~~r~ 41 (258)
|+++||.|+|++|.+|+.+++.+.+ .+++++++.+.
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~ 39 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER 39 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 3568999999999999999999885 57888855443
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=1.3e-05 Score=65.53 Aligned_cols=78 Identities=19% Similarity=0.169 Sum_probs=52.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
|||.|+||+|++|+.++..|+..| .+|.++++++.......+..... ..++..+. ...+++++++++|+||++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~-~~~l~~~~----~t~d~~~a~~~aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET-RATVKGYL----GPEQLPDCLKGCDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS-SCEEEEEE----SGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc-CceEEEec----CCCCHHHHhCCCCEEEEC
Confidence 489999999999999999999888 79999998761111111111110 01122111 124577789999999999
Q ss_pred CCCCC
Q 025065 87 ASPVI 91 (258)
Q Consensus 87 a~~~~ 91 (258)
++...
T Consensus 76 ag~~~ 80 (314)
T 1mld_A 76 AGVPR 80 (314)
T ss_dssp CSCCC
T ss_pred CCcCC
Confidence 99854
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.15 E-value=3.4e-06 Score=64.25 Aligned_cols=75 Identities=20% Similarity=0.187 Sum_probs=51.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH---hC--CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA---VD--GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~---~~--~~d 81 (258)
.+++|+|+||+|.||..+++.+...|.+|++++|+++.. +...+. +.. ...|..+.+..+.+ .. ++|
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~--~~~~~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR--EMLSRL-----GVE-YVGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH--HHHHTT-----CCS-EEEETTCSTHHHHHHHHTTTCCEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHc-----CCC-EEeeCCcHHHHHHHHHHhCCCCCe
Confidence 468999999999999999999999999999998865322 112111 111 22466665433333 22 589
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||++++.
T Consensus 110 ~vi~~~g~ 117 (198)
T 1pqw_A 110 VVLNSLAG 117 (198)
T ss_dssp EEEECCCT
T ss_pred EEEECCch
Confidence 99999873
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=7e-06 Score=67.60 Aligned_cols=80 Identities=20% Similarity=0.086 Sum_probs=51.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC--E-----EEEEEcCCCCcc-chhhccccCc-CCcEEEEEccCCCcccHHHHhC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY--T-----VKATVRDPNSPK-TEHLRELDGA-TERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~--~-----V~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
.+||+||||+|+||++++..|...+. + ++.+++...... ......+... .+-. .++...+...+.++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~----~~~~~~~~~~~~~~ 78 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL----KDVIATDKEEIAFK 78 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE----EEEEEESCHHHHTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc----CCEEEcCCcHHHhC
Confidence 47899999999999999999998764 4 888877532111 1111111100 0111 12333345677899
Q ss_pred CCcEEEecCCCCC
Q 025065 79 GCDGVFHTASPVI 91 (258)
Q Consensus 79 ~~d~Vih~a~~~~ 91 (258)
++|+|||+||...
T Consensus 79 daDvVvitAg~pr 91 (333)
T 5mdh_A 79 DLDVAILVGSMPR 91 (333)
T ss_dssp TCSEEEECCSCCC
T ss_pred CCCEEEEeCCCCC
Confidence 9999999999754
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.08 E-value=2.4e-06 Score=66.93 Aligned_cols=72 Identities=11% Similarity=0.082 Sum_probs=57.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~ 86 (258)
.++|+|+|+ |.+|+.+++.|.+.|+ |+++++++... ..+. .++.++.+|.++++.+.++ +.++|.||-+
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~-----~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK-----KVLR---SGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHH-----HHHH---TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHH-----HHHh---cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 468999998 9999999999999999 99988765332 1111 3578999999999988876 7889999976
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
.+.
T Consensus 79 ~~~ 81 (234)
T 2aef_A 79 LES 81 (234)
T ss_dssp CSC
T ss_pred CCC
Confidence 543
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=2.6e-06 Score=65.63 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=49.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEE-EccCCCcccHHHHhCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLF-KANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
|+|+|+||+|++|+.+++.|.+.|++|++++|+++.... +.+.. +. ++ ..|+. .+++.++++++|+||++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~--~~~~~----~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA--KAAEY----RR-IAGDASIT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH--HHHHH----HH-HHSSCCEE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--HHHHh----cc-ccccCCCC-hhhHHHHHhcCCEEEEeC
Confidence 479999999999999999999999999999987543211 11100 00 00 01222 245667778899999987
Q ss_pred CC
Q 025065 88 SP 89 (258)
Q Consensus 88 ~~ 89 (258)
..
T Consensus 73 ~~ 74 (212)
T 1jay_A 73 PW 74 (212)
T ss_dssp CH
T ss_pred Ch
Confidence 54
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.1e-05 Score=65.91 Aligned_cols=82 Identities=10% Similarity=0.034 Sum_probs=57.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCcc-chhh-ccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK-TEHL-RELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
.++++++|+|+ |.+|+.++..|.+.|. +|++.+|+.+... .+.+ .++.. ..+......++.+.+++.+.+.++|+
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~-~~~~~~~~~~~~~~~~l~~~l~~aDi 229 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVI 229 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-HSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhh-hcCCceEEeccchHHHHHhhhcCCCE
Confidence 46789999998 8999999999999997 8999999843221 1111 11110 01233444566666667788889999
Q ss_pred EEecCCC
Q 025065 83 VFHTASP 89 (258)
Q Consensus 83 Vih~a~~ 89 (258)
|||+...
T Consensus 230 IINaTp~ 236 (315)
T 3tnl_A 230 FTNATGV 236 (315)
T ss_dssp EEECSST
T ss_pred EEECccC
Confidence 9998765
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.99 E-value=7.6e-06 Score=68.60 Aligned_cols=77 Identities=17% Similarity=0.121 Sum_probs=57.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|+|+|+ |.+|+.+++.|...|.+|++++|++.+.. ...+. .... +.+|..+.+++.+.+.++|+||+
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~--~~~~~--~g~~---~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQ--YLDDV--FGGR---VITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHH--TTTS---EEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHH--HHHHh--cCce---EEEecCCHHHHHHHHhCCCEEEE
Confidence 35689999999 99999999999999999999998764321 11110 0111 45677777788888889999999
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+++..
T Consensus 236 ~~g~~ 240 (369)
T 2eez_A 236 AVLVP 240 (369)
T ss_dssp CCC--
T ss_pred CCCCC
Confidence 99864
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.96 E-value=4.4e-05 Score=61.88 Aligned_cols=87 Identities=20% Similarity=0.150 Sum_probs=58.8
Q ss_pred CCcE-EEEE-CCc-----------------chHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhc---------cccCcC
Q 025065 7 EEKV-VCVT-GAS-----------------GFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLR---------ELDGAT 57 (258)
Q Consensus 7 ~~~~-ilIt-Ga~-----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~---------~~~~~~ 57 (258)
.+++ |||| |+| |-.|.++++++..+|++|+.+.+..+-... ..+. .....+
T Consensus 35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~ 114 (313)
T 1p9o_A 35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPAL 114 (313)
T ss_dssp TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-C
T ss_pred cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccc
Confidence 4566 9998 666 999999999999999999999886432211 0010 000012
Q ss_pred CcEEEEEccCCCcccHHHHh-------------------------------------CCCcEEEecCCCCCCC
Q 025065 58 ERLHLFKANLLEEGSFDSAV-------------------------------------DGCDGVFHTASPVIFL 93 (258)
Q Consensus 58 ~~~~~~~~Dl~~~~~~~~~~-------------------------------------~~~d~Vih~a~~~~~~ 93 (258)
.++..+.+|....+++.+++ .+.|++|++||...+.
T Consensus 115 ~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~ 187 (313)
T 1p9o_A 115 SGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY 187 (313)
T ss_dssp CSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred cccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence 34556777777766655544 4589999999997654
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.95 E-value=2.3e-05 Score=65.09 Aligned_cols=75 Identities=23% Similarity=0.271 Sum_probs=54.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d 81 (258)
.+++|||+|++|.+|..+++.+...|.+|++++|++.+. +...++ +.. ...|..+.+++.+.+. ++|
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~--~~~~~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE--ELFRSI-----GGE-VFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH--HHHHHT-----TCC-EEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH--HHHHHc-----CCc-eEEecCccHhHHHHHHHHhCCCCC
Confidence 467999999999999999999999999999999876443 222221 122 2347775555554443 689
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||++++.
T Consensus 241 ~vi~~~g~ 248 (347)
T 2hcy_A 241 GVINVSVS 248 (347)
T ss_dssp EEEECSSC
T ss_pred EEEECCCc
Confidence 99999985
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=1.8e-05 Score=65.31 Aligned_cols=75 Identities=21% Similarity=0.273 Sum_probs=53.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-----CCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~d 81 (258)
.+++|||+||+|.||..+++.+...|.+|++++++.... +...++ +.. ...|..+.+++.+.+ .++|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~--~~~~~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI--AYLKQI-----GFD-AAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT-----TCS-EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHhc-----CCc-EEEecCCHHHHHHHHHHHhCCCCe
Confidence 468999999999999999999999999999998865332 112221 111 235777644444433 2589
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||+++|.
T Consensus 217 ~vi~~~g~ 224 (333)
T 1v3u_A 217 CYFDNVGG 224 (333)
T ss_dssp EEEESSCH
T ss_pred EEEECCCh
Confidence 99999984
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.95 E-value=2.4e-05 Score=64.64 Aligned_cols=80 Identities=13% Similarity=0.037 Sum_probs=52.9
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccch--hhccccCcCCcEEEEEccCCCcccHHHHhCCC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTE--HLRELDGATERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
.|+++||.|+|++|++|+.++..|+..| .+|++++.+....... -+..... +. .++.-..++.+.++++
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~--~~-----~~i~~t~d~~~al~dA 77 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF--EG-----LNLTFTSDIKEALTDA 77 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC--TT-----CCCEEESCHHHHHTTE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC--CC-----CceEEcCCHHHHhCCC
Confidence 4567899999999999999999999988 5899998754322111 1111110 00 1222234577789999
Q ss_pred cEEEecCCCCC
Q 025065 81 DGVFHTASPVI 91 (258)
Q Consensus 81 d~Vih~a~~~~ 91 (258)
|+||.+||...
T Consensus 78 DvVvitaG~p~ 88 (343)
T 3fi9_A 78 KYIVSSGGAPR 88 (343)
T ss_dssp EEEEECCC---
T ss_pred CEEEEccCCCC
Confidence 99999999753
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.94 E-value=3.1e-05 Score=65.03 Aligned_cols=72 Identities=14% Similarity=0.195 Sum_probs=56.1
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
+.+.+++|+|+|+ |.+|+.+++++.+.|++|++++..+...... . --.++..|..|.+.+.++++++|+|
T Consensus 8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~----~-----ad~~~~~~~~d~~~l~~~~~~~dvi 77 (377)
T 3orq_A 8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRY----V-----AHEFIQAKYDDEKALNQLGQKCDVI 77 (377)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGG----G-----SSEEEECCTTCHHHHHHHHHHCSEE
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhh----h-----CCEEEECCCCCHHHHHHHHHhCCcc
Confidence 3446789999997 8999999999999999999998765432111 1 1246778999999999988889987
Q ss_pred Ee
Q 025065 84 FH 85 (258)
Q Consensus 84 ih 85 (258)
.-
T Consensus 78 ~~ 79 (377)
T 3orq_A 78 TY 79 (377)
T ss_dssp EE
T ss_pred ee
Confidence 53
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=4e-05 Score=63.50 Aligned_cols=75 Identities=24% Similarity=0.287 Sum_probs=51.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhc-cccCcCCcEEEEEccCCCcccHHHHh-----CCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR-ELDGATERLHLFKANLLEEGSFDSAV-----DGC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~ 80 (258)
.+++|||+||+|.+|..+++.+...|.+|+++++++.+. +... ++ +.. ...|..+.+++.+.+ .++
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~--~~~~~~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKV--DLLKTKF-----GFD-DAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHTS-----CCS-EEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHc-----CCc-eEEecCCHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999865332 1111 11 111 223666543443333 258
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+||++++.
T Consensus 227 d~vi~~~g~ 235 (345)
T 2j3h_A 227 DIYFENVGG 235 (345)
T ss_dssp EEEEESSCH
T ss_pred cEEEECCCH
Confidence 999999874
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.79 E-value=4.8e-05 Score=63.05 Aligned_cols=36 Identities=28% Similarity=0.416 Sum_probs=30.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC-----C-EEEEEEcC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG-----Y-TVKATVRD 41 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g-----~-~V~~~~r~ 41 (258)
|+|+||+|.||||++|+.|++.|.+++ + +++++.++
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~ 48 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA 48 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC
Confidence 456799999999999999999999887 4 77777643
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00017 Score=59.10 Aligned_cols=77 Identities=18% Similarity=0.119 Sum_probs=50.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchh--hccc-cCcCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEH--LREL-DGATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
+++||.|+|+ |++|+.++..|...|. +|++++++........ +... .....++.....| .+.++++|
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aD 75 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDAD 75 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCC
Confidence 3679999996 9999999999999886 8999988543221111 1111 1111233433322 13578999
Q ss_pred EEEecCCCCC
Q 025065 82 GVFHTASPVI 91 (258)
Q Consensus 82 ~Vih~a~~~~ 91 (258)
+||.++|...
T Consensus 76 vVvi~ag~p~ 85 (326)
T 3pqe_A 76 IVCICAGANQ 85 (326)
T ss_dssp EEEECCSCCC
T ss_pred EEEEecccCC
Confidence 9999999743
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.78 E-value=2.7e-05 Score=64.07 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=51.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh---C--CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV---D--GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~--~~d 81 (258)
.+++|||+||+|.||..+++.+...|++|+++++++.+. +...++ .. + ...|..+.+..+.+. . ++|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~--~~~~~~---g~--~-~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA--QSALKA---GA--W-QVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH--HHHHHH---TC--S-EEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHc---CC--C-EEEECCCccHHHHHHHHhCCCCce
Confidence 468999999999999999999999999999999865332 112211 11 1 224666655444332 2 589
Q ss_pred EEEecCC
Q 025065 82 GVFHTAS 88 (258)
Q Consensus 82 ~Vih~a~ 88 (258)
+||+++|
T Consensus 212 ~vi~~~g 218 (327)
T 1qor_A 212 VVYDSVG 218 (327)
T ss_dssp EEEECSC
T ss_pred EEEECCc
Confidence 9999998
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.77 E-value=2.8e-05 Score=64.11 Aligned_cols=75 Identities=21% Similarity=0.219 Sum_probs=52.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHH---Hh--CCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AV--DGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~--~~~d 81 (258)
.+++|||+||+|.+|..+++.+...|++|++++++..+. +...++ ... ...|..+.+..+. .. .++|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~--~~~~~~---g~~---~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA--ETARKL---GCH---HTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHH---TCS---EEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHc---CCC---EEEECCCHHHHHHHHHHhCCCCCe
Confidence 467999999999999999999999999999999875332 112221 111 2246666543333 22 2589
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||+++|.
T Consensus 217 ~vi~~~g~ 224 (333)
T 1wly_A 217 VVYDSIGK 224 (333)
T ss_dssp EEEECSCT
T ss_pred EEEECCcH
Confidence 99999985
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=2.5e-05 Score=66.28 Aligned_cols=74 Identities=20% Similarity=0.263 Sum_probs=59.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~ 86 (258)
+++|+|+|+ |-+|+.+++.|.+.|++|+++++++..... +. ..++..+.||.++++.+.++ +.++|+||-+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~--~~-----~~g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIET--LR-----KFGMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHH--HH-----HTTCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH--HH-----hCCCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 467999997 999999999999999999999987644321 11 13677899999999988877 6789999877
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
...
T Consensus 76 ~~~ 78 (413)
T 3l9w_A 76 IDD 78 (413)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.75 E-value=3.3e-05 Score=61.87 Aligned_cols=76 Identities=16% Similarity=0.161 Sum_probs=49.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+++++++|+|+ |.+|+.++..|.+.|.+|++.+|+.++... ....+.. ...+. ..|+ +++.+ .++|+|||
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~-la~~~~~-~~~~~--~~~~---~~~~~--~~~DivVn 186 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEE-LAKLFAH-TGSIQ--ALSM---DELEG--HEFDLIIN 186 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHH-HHHHTGG-GSSEE--ECCS---GGGTT--CCCSEEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHH-HHHHhhc-cCCee--EecH---HHhcc--CCCCEEEE
Confidence 45789999998 779999999999999999999887543211 1111110 01121 1232 22222 57999999
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
+++...
T Consensus 187 ~t~~~~ 192 (271)
T 1nyt_A 187 ATSSGI 192 (271)
T ss_dssp CCSCGG
T ss_pred CCCCCC
Confidence 998743
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.75 E-value=2.2e-05 Score=67.62 Aligned_cols=73 Identities=15% Similarity=0.224 Sum_probs=57.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~ 86 (258)
.|||+|.|+ |-+|++|++.|.++||+|+++++++.... .+.. .-++..+.||-++++.++++ ++++|.+|-+
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~--~~~~----~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLR--ELQD----KYDLRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHH--HHHH----HSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHH--HHHH----hcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 578999998 99999999999999999999998764331 1211 12578899999999998876 5779998844
Q ss_pred C
Q 025065 87 A 87 (258)
Q Consensus 87 a 87 (258)
.
T Consensus 76 t 76 (461)
T 4g65_A 76 T 76 (461)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=97.74 E-value=4e-05 Score=65.32 Aligned_cols=70 Identities=19% Similarity=0.186 Sum_probs=54.8
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.+.+++|+|+|+ |.+|+.+++++.+.|++|++++..+.... .+. .-..+..|..|.+.+.++++++|+|+
T Consensus 32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~---~~~------ad~~~~~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPA---GAV------ADRHLRAAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHH---HHH------SSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCch---hhh------CCEEEECCcCCHHHHHHHHhcCCEEE
Confidence 346789999997 89999999999999999999875443321 111 11456789999999999888899988
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=4.4e-05 Score=63.58 Aligned_cols=75 Identities=12% Similarity=0.053 Sum_probs=52.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH---hC--CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA---VD--GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~---~~--~~d 81 (258)
.+++|||+||+|.||..+++.+...|.+|+++++++++. +...++ . .+ ...|..+.+..+.+ .. ++|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~---g--~~-~~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL--QMAEKL---G--AA-AGFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHH---T--CS-EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHc---C--Cc-EEEecCChHHHHHHHHHhcCCCce
Confidence 467999999999999999999999999999999865332 112221 1 11 23466665433333 22 589
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||+++|.
T Consensus 234 ~vi~~~G~ 241 (354)
T 2j8z_A 234 LILDCIGG 241 (354)
T ss_dssp EEEESSCG
T ss_pred EEEECCCc
Confidence 99999985
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.70 E-value=7e-05 Score=58.73 Aligned_cols=35 Identities=14% Similarity=0.284 Sum_probs=28.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEE-EcCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDP 42 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~-~r~~ 42 (258)
+|+||.|+|+ |.+|+.+++.+.+.+.++.+. +++.
T Consensus 2 ~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~ 37 (243)
T 3qy9_A 2 ASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP 37 (243)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred CceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence 4689999999 999999999999887777664 4443
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00014 Score=57.46 Aligned_cols=104 Identities=15% Similarity=0.084 Sum_probs=64.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCc-----------------cchhh-ccccCcCC--cEEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP-----------------KTEHL-RELDGATE--RLHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~~~-~~~~~~~~--~~~~~~~ 65 (258)
++++|+|.|+ |.+|+++++.|...|. ++++++++.-.. +.+.. +.+...++ .++.+..
T Consensus 30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 3578999997 8999999999999996 899988875221 11000 11111123 3455555
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcC
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHP 128 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp 128 (258)
++++ +.+.+.+.++|+||.+... ..++.. +..++.+.+++++....
T Consensus 109 ~~~~-~~~~~~~~~~DvVi~~~d~------------~~~~~~----l~~~~~~~~~p~i~~~~ 154 (249)
T 1jw9_B 109 LLDD-AELAALIAEHDLVLDCTDN------------VAVRNQ----LNAGCFAAKVPLVSGAA 154 (249)
T ss_dssp CCCH-HHHHHHHHTSSEEEECCSS------------HHHHHH----HHHHHHHHTCCEEEEEE
T ss_pred cCCH-hHHHHHHhCCCEEEEeCCC------------HHHHHH----HHHHHHHcCCCEEEeee
Confidence 5653 4567778899999988654 123333 33335555777766543
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=6.5e-05 Score=62.54 Aligned_cols=73 Identities=19% Similarity=0.152 Sum_probs=50.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhcc-ccCcCCcEEEEEccCCCcccHHHHh---C-CCcE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRE-LDGATERLHLFKANLLEEGSFDSAV---D-GCDG 82 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~---~-~~d~ 82 (258)
++|||+||+|.||..+++.+...|. +|++++++..+. +...+ + +.+ ...|..+.+..+.+. . ++|+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~--~~~~~~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~d~ 233 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC--ILLTSEL-----GFD-AAINYKKDNVAEQLRESCPAGVDV 233 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH--HHHHHTS-----CCS-EEEETTTSCHHHHHHHHCTTCEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH--HHHHHHc-----CCc-eEEecCchHHHHHHHHhcCCCCCE
Confidence 7999999999999999999999999 999999865332 11111 1 111 234666644333222 2 5899
Q ss_pred EEecCCC
Q 025065 83 VFHTASP 89 (258)
Q Consensus 83 Vih~a~~ 89 (258)
||+++|.
T Consensus 234 vi~~~G~ 240 (357)
T 2zb4_A 234 YFDNVGG 240 (357)
T ss_dssp EEESCCH
T ss_pred EEECCCH
Confidence 9999983
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00021 Score=60.18 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=54.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+++|+|+|+ |.+|+.+++++.+.|++|++++..+...... . .-..+..|..|.+.+.++++.+|+|.-
T Consensus 12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~----~-----ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQ----V-----ADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTT----T-----CSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHH----h-----CCceEecCcCCHHHHHHHHHhCCEeee
Confidence 46789999997 8899999999999999999998655332110 0 113456888898889999988998843
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.67 E-value=5.1e-05 Score=63.10 Aligned_cols=75 Identities=23% Similarity=0.154 Sum_probs=51.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHH---HhC--CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AVD--GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~~--~~d 81 (258)
.+++|||+||+|.+|..+++.+...|.+|+++++++.+.. ...++ +.+ ...|..+.+..+. ... ++|
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~--~~~~~-----ga~-~~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK--IVLQN-----GAH-EVFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHT-----TCS-EEEETTSTTHHHHHHHHHCTTCEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH--HHHHc-----CCC-EEEeCCCchHHHHHHHHcCCCCcE
Confidence 4679999999999999999999999999999998754321 12221 111 2246665443333 332 689
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||+++|.
T Consensus 242 ~vi~~~G~ 249 (351)
T 1yb5_A 242 IIIEMLAN 249 (351)
T ss_dssp EEEESCHH
T ss_pred EEEECCCh
Confidence 99999874
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.63 E-value=2.1e-05 Score=56.66 Aligned_cols=71 Identities=15% Similarity=0.229 Sum_probs=51.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+++|+|+|+ |.+|+.+++.|.+.|++|++.+|++.+... ..... +. +....+++.+.+.++|+||.+.
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~-~a~~~-----~~-----~~~~~~~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRA-FAEKY-----EY-----EYVLINDIDSLIKNNDVIITAT 88 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHH-HHHHH-----TC-----EEEECSCHHHHHHTCSEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHH-HHHHh-----CC-----ceEeecCHHHHhcCCCEEEEeC
Confidence 679999997 999999999999999999888887644311 01111 11 1223345777888999999988
Q ss_pred CCC
Q 025065 88 SPV 90 (258)
Q Consensus 88 ~~~ 90 (258)
+..
T Consensus 89 ~~~ 91 (144)
T 3oj0_A 89 SSK 91 (144)
T ss_dssp CCS
T ss_pred CCC
Confidence 764
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=7.9e-05 Score=60.68 Aligned_cols=83 Identities=14% Similarity=0.127 Sum_probs=53.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc-hhh-ccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT-EHL-RELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
.++++++|+|+ |..|+.++..|.+.|. +|++.+|+.++... +.+ .++.. ..+......++.+.+.+.+.+.++|+
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~-~~~~~v~~~~~~~l~~~~~~l~~~Di 223 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNE-NTDCVVTVTDLADQHAFTEALASADI 223 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHH-HSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhh-ccCcceEEechHhhhhhHhhccCceE
Confidence 35789999998 8999999999999997 89999998433111 111 11110 01122333455443334566778999
Q ss_pred EEecCCCC
Q 025065 83 VFHTASPV 90 (258)
Q Consensus 83 Vih~a~~~ 90 (258)
|||+....
T Consensus 224 IINaTp~G 231 (312)
T 3t4e_A 224 LTNGTKVG 231 (312)
T ss_dssp EEECSSTT
T ss_pred EEECCcCC
Confidence 99987653
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.60 E-value=6.4e-05 Score=62.57 Aligned_cols=37 Identities=24% Similarity=0.417 Sum_probs=30.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDP 42 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~ 42 (258)
|+++||.|.||+|++|+.+++.|.+.+ .+++++.+..
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~ 51 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR 51 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch
Confidence 445789999999999999999999876 4888876543
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=9.2e-05 Score=61.07 Aligned_cols=75 Identities=20% Similarity=0.218 Sum_probs=51.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhh-ccccCcCCcEEEEEccCCCcccHHHHh----CCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHL-RELDGATERLHLFKANLLEEGSFDSAV----DGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~----~~~d 81 (258)
.+++|||+||+|.||..+++.+...|.+|+++++++.+. +.. .++ +.+ ...|..+.+....+. .++|
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~~-----g~~-~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKC--RFLVEEL-----GFD-GAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHTT-----CCS-EEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHc-----CCC-EEEECCCHHHHHHHHHhcCCCce
Confidence 468999999999999999999999999999999865332 112 221 121 224555544333322 2599
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||++++.
T Consensus 221 ~vi~~~g~ 228 (336)
T 4b7c_A 221 VFFDNVGG 228 (336)
T ss_dssp EEEESSCH
T ss_pred EEEECCCc
Confidence 99999885
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00012 Score=58.31 Aligned_cols=76 Identities=12% Similarity=0.120 Sum_probs=48.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC-CCEEEEE-EcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|+|+||.|+|++|.+|+.+++.+.+. ++++.+. +|+.++..-....++. +.. .++.-.+++.+++.++|+|
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~----g~~---~gv~v~~dl~~ll~~~DVV 77 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFL----GKQ---TGVALTDDIERVCAEADYL 77 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTT----TCC---CSCBCBCCHHHHHHHCSEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHh----CCC---CCceecCCHHHHhcCCCEE
Confidence 56789999999999999999999875 5787764 5543321101111111 110 0233345677778789999
Q ss_pred EecCC
Q 025065 84 FHTAS 88 (258)
Q Consensus 84 ih~a~ 88 (258)
|+++.
T Consensus 78 IDfT~ 82 (272)
T 4f3y_A 78 IDFTL 82 (272)
T ss_dssp EECSC
T ss_pred EEcCC
Confidence 99863
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00016 Score=55.66 Aligned_cols=67 Identities=24% Similarity=0.267 Sum_probs=47.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
++++|.|+| +|.+|+.+++.|.+.|++|++.+|+++.. +.+.. .++... ++.++++++|+||.+
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~--~~~~~-----~g~~~~--------~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRT--ARLFP-----SAAQVT--------FQEEAVSSPEVIFVA 90 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHH--HHHSB-----TTSEEE--------EHHHHTTSCSEEEEC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHH-----cCCcee--------cHHHHHhCCCEEEEC
Confidence 357899999 69999999999999999999998875332 11111 123221 466778889999987
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
...
T Consensus 91 v~~ 93 (215)
T 2vns_A 91 VFR 93 (215)
T ss_dssp SCG
T ss_pred CCh
Confidence 654
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00018 Score=61.01 Aligned_cols=71 Identities=20% Similarity=0.207 Sum_probs=54.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
|++++|+|+|+ |.+|+.+++++.+.|++|++++ .+..+.. .+ ......+.+|..|.+.+.++++.+|+|+-
T Consensus 22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~-~~------ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 22 WNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAK-QI------SAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTG-GG------CCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHH-Hh------ccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 45689999998 8999999999999999999998 5433211 11 01123567899999999999999998763
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00015 Score=59.49 Aligned_cols=80 Identities=18% Similarity=0.200 Sum_probs=51.1
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccch--hhccccC-cCCcEEEEEccCCCcccHHHHhCCC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTE--HLRELDG-ATERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
+|+++||.|+|+ |.+|..++..|...|+ +|+++++++...... .+..... .......... .+. +.++++
T Consensus 4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t-----~d~-~a~~~a 76 (324)
T 3gvi_A 4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA-----NDY-AAIEGA 76 (324)
T ss_dssp --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-----SSG-GGGTTC
T ss_pred CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe-----CCH-HHHCCC
Confidence 456789999998 9999999999999998 999999876543211 1111000 0011122111 122 568899
Q ss_pred cEEEecCCCCC
Q 025065 81 DGVFHTASPVI 91 (258)
Q Consensus 81 d~Vih~a~~~~ 91 (258)
|+||.+++...
T Consensus 77 DiVIiaag~p~ 87 (324)
T 3gvi_A 77 DVVIVTAGVPR 87 (324)
T ss_dssp SEEEECCSCCC
T ss_pred CEEEEccCcCC
Confidence 99999998743
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00019 Score=58.73 Aligned_cols=77 Identities=19% Similarity=0.176 Sum_probs=50.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccch--hhccccCcCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTE--HLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
..++||.|+|+ |.+|+.++..|...|. ++++++++....... .+.........+.....| .+.++++|
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD 78 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD 78 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence 45789999997 9999999999998886 899998854322111 111111101233333222 23588999
Q ss_pred EEEecCCCC
Q 025065 82 GVFHTASPV 90 (258)
Q Consensus 82 ~Vih~a~~~ 90 (258)
+||.+||..
T Consensus 79 iVvi~ag~~ 87 (326)
T 3vku_A 79 LVVITAGAP 87 (326)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999999974
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00066 Score=55.87 Aligned_cols=78 Identities=22% Similarity=0.221 Sum_probs=51.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc--hhhccc-cCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT--EHLREL-DGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
++||.|+|| |.+|..++..|...|+ +|++++++++.... ..+... ..... ...+.-..++.+.++++|+|
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~-----~~~i~~t~d~~ea~~~aDiV 82 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDT-----NVSVRAEYSYEAALTGADCV 82 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTC-----CCCEEEECSHHHHHTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCC-----CCEEEEeCCHHHHhCCCCEE
Confidence 468999998 9999999999999998 99999887643221 111110 00000 11111124566678999999
Q ss_pred EecCCCCC
Q 025065 84 FHTASPVI 91 (258)
Q Consensus 84 ih~a~~~~ 91 (258)
|-+++...
T Consensus 83 i~a~g~p~ 90 (331)
T 1pzg_A 83 IVTAGLTK 90 (331)
T ss_dssp EECCSCSS
T ss_pred EEccCCCC
Confidence 99998743
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0014 Score=53.54 Aligned_cols=76 Identities=18% Similarity=0.142 Sum_probs=47.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
+++||.|+|+ |++|..++..|...+. +|++++.+...... ..+.........+++.. .+ .+.++++|+
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aDv 77 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDCDV 77 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCCE
Confidence 3578999998 9999999999999986 89999987644321 11111100112233221 12 235889999
Q ss_pred EEecCCCC
Q 025065 83 VFHTASPV 90 (258)
Q Consensus 83 Vih~a~~~ 90 (258)
||.+++..
T Consensus 78 Vii~~g~p 85 (318)
T 1y6j_A 78 IVVTAGAN 85 (318)
T ss_dssp EEECCCC-
T ss_pred EEEcCCCC
Confidence 99999874
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00011 Score=59.03 Aligned_cols=79 Identities=16% Similarity=0.246 Sum_probs=53.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.++++++|+|+ |.+|+.++.+|.+.|. +|++.+|+.++... ....+......+.....+ .+++.+.+.++|+||
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~-la~~~~~~~~~~~i~~~~---~~~l~~~l~~~DiVI 199 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQA-LADVINNAVGREAVVGVD---ARGIEDVIAAADGVV 199 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHH-HHHHHHHHHTSCCEEEEC---STTHHHHHHHSSEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHH-HHHHHHhhcCCceEEEcC---HHHHHHHHhcCCEEE
Confidence 45789999998 8999999999999997 79999987654321 001111001112222223 345777788899999
Q ss_pred ecCCC
Q 025065 85 HTASP 89 (258)
Q Consensus 85 h~a~~ 89 (258)
|+...
T Consensus 200 naTp~ 204 (283)
T 3jyo_A 200 NATPM 204 (283)
T ss_dssp ECSST
T ss_pred ECCCC
Confidence 98865
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0002 Score=59.55 Aligned_cols=75 Identities=17% Similarity=0.138 Sum_probs=51.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh----CCCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV----DGCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----~~~d~ 82 (258)
.+.+|||+||+|.+|...++.+...|.+|+++++++.+.. ...++ ... ...|..+.+..+.+. .++|+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~--~~~~l---Ga~---~~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE--ACERL---GAK---RGINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHH---TCS---EEEETTTSCHHHHHHHHHSSCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH--HHHhc---CCC---EEEeCCchHHHHHHHHHhCCCceE
Confidence 4679999999999999999999999999999998764332 12221 111 123555544333222 26999
Q ss_pred EEecCCC
Q 025065 83 VFHTASP 89 (258)
Q Consensus 83 Vih~a~~ 89 (258)
||++++.
T Consensus 239 vid~~g~ 245 (353)
T 4dup_A 239 ILDMIGA 245 (353)
T ss_dssp EEESCCG
T ss_pred EEECCCH
Confidence 9999985
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00013 Score=60.46 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=52.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc---HHHHh--CCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAV--DGC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~--~~~ 80 (258)
.+++|||+|++|.+|..+++.+... |.+|+++++++.+. +...++ ... ...|..+.+. +.++. .++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~--~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV--EAAKRA---GAD---YVINASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH--HHHHHH---TCS---EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH--HHHHHh---CCC---EEecCCCccHHHHHHHHhcCCCc
Confidence 4679999999999999999999998 99999998765332 112221 111 1235555443 34444 369
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+||++++.
T Consensus 242 d~vi~~~g~ 250 (347)
T 1jvb_A 242 DAVIDLNNS 250 (347)
T ss_dssp EEEEESCCC
T ss_pred eEEEECCCC
Confidence 999999986
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00011 Score=60.27 Aligned_cols=75 Identities=19% Similarity=0.234 Sum_probs=51.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHH---HhC--CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AVD--GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~~--~~d 81 (258)
.+++|||+||+|.+|...++.+...|.+|+++++++.+. +...++ ... ...|..+.+..+. ... ++|
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~---Ga~---~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKA--AHAKAL---GAW---ETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHH--HHHHHH---TCS---EEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHc---CCC---EEEeCCCccHHHHHHHHhCCCCce
Confidence 467999999999999999999999999999999865432 222221 111 1235555443333 332 589
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||++++.
T Consensus 212 vvid~~g~ 219 (325)
T 3jyn_A 212 VVYDGVGQ 219 (325)
T ss_dssp EEEESSCG
T ss_pred EEEECCCh
Confidence 99999985
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00016 Score=59.60 Aligned_cols=75 Identities=20% Similarity=0.219 Sum_probs=51.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHH---Hh--CCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AV--DGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~--~~~d 81 (258)
.+.+|||+||+|.+|...++.+...|.+|+++++++.+. +...++ .. + ...|..+.+..+. .. .++|
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~~---ga--~-~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKL--KIAKEY---GA--E-YLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT---TC--S-EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHc---CC--c-EEEeCCCchHHHHHHHHhCCCCce
Confidence 467999999999999999999999999999999865332 222221 11 1 1235544433333 22 2589
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||++++.
T Consensus 220 ~vid~~g~ 227 (334)
T 3qwb_A 220 ASFDSVGK 227 (334)
T ss_dssp EEEECCGG
T ss_pred EEEECCCh
Confidence 99999985
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00038 Score=57.63 Aligned_cols=35 Identities=29% Similarity=0.517 Sum_probs=29.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~ 42 (258)
++||.|.||+|++|+.+++.|.+.+. +++++.+..
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~ 39 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR 39 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch
Confidence 47999999999999999999997764 888776643
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.42 E-value=6.6e-05 Score=62.00 Aligned_cols=70 Identities=10% Similarity=0.066 Sum_probs=57.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a 87 (258)
++++|.|+ |.+|+.+++.|.++|+ |++++++++.. + +.. .++.++.+|.++++.++++ ++++|.|+-+.
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~--~-~~~-----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK--K-VLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDL 185 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH--H-HHH-----TTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh--h-HHh-----CCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence 57999997 9999999999999999 99888765332 2 221 4688999999999999887 78899999665
Q ss_pred C
Q 025065 88 S 88 (258)
Q Consensus 88 ~ 88 (258)
+
T Consensus 186 ~ 186 (336)
T 1lnq_A 186 E 186 (336)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00014 Score=58.97 Aligned_cols=76 Identities=22% Similarity=0.172 Sum_probs=51.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+.+++++|+|+ |.+|+.++..|.+.|. +|++.+|+.++... ....+. .... +..+.+++.+.+.++|+||
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~-la~~~~---~~~~----~~~~~~~~~~~~~~aDivI 209 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAER-LVREGD---ERRS----AYFSLAEAETRLAEYDIII 209 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHH-HHHHSC---SSSC----CEECHHHHHHTGGGCSEEE
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HHHHhh---hccC----ceeeHHHHHhhhccCCEEE
Confidence 45789999998 7799999999999997 99999987643211 111110 0000 1112235666778899999
Q ss_pred ecCCCC
Q 025065 85 HTASPV 90 (258)
Q Consensus 85 h~a~~~ 90 (258)
++++..
T Consensus 210 n~t~~~ 215 (297)
T 2egg_A 210 NTTSVG 215 (297)
T ss_dssp ECSCTT
T ss_pred ECCCCC
Confidence 999864
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00016 Score=58.71 Aligned_cols=74 Identities=22% Similarity=0.133 Sum_probs=51.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+.+|||+|++|.+|...++.+...|.+|+++++++.+.. ...++ +.+. ..|..+.+++.+.+.++|+||+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~--~~~~~-----ga~~-~~~~~~~~~~~~~~~~~d~vid- 195 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA--LPLAL-----GAEE-AATYAEVPERAKAWGGLDLVLE- 195 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH--HHHHT-----TCSE-EEEGGGHHHHHHHTTSEEEEEE-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHhc-----CCCE-EEECCcchhHHHHhcCceEEEE-
Confidence 4679999999999999999999999999999998654432 12221 1111 2344441234444578999999
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
++.
T Consensus 196 ~g~ 198 (302)
T 1iz0_A 196 VRG 198 (302)
T ss_dssp CSC
T ss_pred CCH
Confidence 775
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00015 Score=60.03 Aligned_cols=74 Identities=18% Similarity=0.102 Sum_probs=51.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc---HHHHhC--CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAVD--GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d 81 (258)
.+++|||+|++|.+|..+++.+...|.+|+++++++.+. +...++ +.+. ..|..+.+. +.+... ++|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~--~~~~~~-----ga~~-~~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKL--RRAKAL-----GADE-TVNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHH-----TCSE-EEETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHhc-----CCCE-EEcCCcccHHHHHHHHhCCCCce
Confidence 467999999999999999999999999999999865332 112221 1111 246665432 233332 589
Q ss_pred EEEecCC
Q 025065 82 GVFHTAS 88 (258)
Q Consensus 82 ~Vih~a~ 88 (258)
+||++++
T Consensus 238 ~vi~~~g 244 (343)
T 2eih_A 238 KVVDHTG 244 (343)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999998
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0014 Score=53.67 Aligned_cols=79 Identities=19% Similarity=0.178 Sum_probs=51.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccch--hhccccC-cCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTE--HLRELDG-ATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
|+++||.|+|+ |.+|+.++..|...|. +|+.+++++...... .+..... ..........+ + . +.++++|
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d---~-~a~~~aD 75 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--D---Y-KDLENSD 75 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--C---G-GGGTTCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C---H-HHHCCCC
Confidence 55689999996 9999999999999887 999999876543211 1111100 00112222111 1 2 4688999
Q ss_pred EEEecCCCCC
Q 025065 82 GVFHTASPVI 91 (258)
Q Consensus 82 ~Vih~a~~~~ 91 (258)
+||.+++...
T Consensus 76 vVIi~ag~p~ 85 (321)
T 3p7m_A 76 VVIVTAGVPR 85 (321)
T ss_dssp EEEECCSCCC
T ss_pred EEEEcCCcCC
Confidence 9999998753
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.41 E-value=6.6e-05 Score=62.66 Aligned_cols=76 Identities=18% Similarity=0.158 Sum_probs=53.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+++|+|+|+ |-+|+.+++.|...|.+|++++|++.+.. .+.+.. ...+.. +..+.+++.+.+.++|+||++
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~--~~~~~~--~~~~~~---~~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLS--YLETLF--GSRVEL---LYSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHH--GGGSEE---EECCHHHHHHHHHTCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH--HHHHhh--CceeEe---eeCCHHHHHHHHcCCCEEEEC
Confidence 4589999999 99999999999999999999998764321 111110 011111 122345566777899999999
Q ss_pred CCCC
Q 025065 87 ASPV 90 (258)
Q Consensus 87 a~~~ 90 (258)
++..
T Consensus 238 ~~~~ 241 (361)
T 1pjc_A 238 VLVP 241 (361)
T ss_dssp CCCT
T ss_pred CCcC
Confidence 9874
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0025 Score=51.87 Aligned_cols=78 Identities=19% Similarity=0.119 Sum_probs=49.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHC-C--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 9 KVVCVTGASGFVASWLVKLLLQR-G--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
|||.|+||+|.+|+.++..|..+ + .+++.+++.+ .. .....++............ .. ....+.++++|+||-
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~-~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VT-PGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-TH-HHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cc-hhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEE
Confidence 48999999999999999999875 5 5788888765 21 1111111111111222111 01 124567899999999
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
+||...
T Consensus 76 ~ag~~r 81 (312)
T 3hhp_A 76 SAGVAR 81 (312)
T ss_dssp CCSCSC
T ss_pred eCCCCC
Confidence 999754
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=5.9e-05 Score=60.75 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=32.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
+++|.|+|+ |.+|+.+++.|.+.|++|++.+|+++.
T Consensus 4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 39 (283)
T 4e12_A 4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDA 39 (283)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence 478999987 999999999999999999999987643
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00088 Score=53.34 Aligned_cols=58 Identities=24% Similarity=0.190 Sum_probs=48.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|+|+++.+|+.++..|+..|..|++..++. .++.+.++++|+||.
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t----------------------------~~L~~~~~~ADIVI~ 209 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------------KDLSLYTRQADLIIV 209 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SCHHHHHTTCSEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHHhhcCCEEEE
Confidence 5789999999999999999999999999999876532 246678889999998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
.++...
T Consensus 210 Avg~p~ 215 (285)
T 3p2o_A 210 AAGCVN 215 (285)
T ss_dssp CSSCTT
T ss_pred CCCCCC
Confidence 888643
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0002 Score=59.14 Aligned_cols=75 Identities=12% Similarity=0.214 Sum_probs=51.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHH---HhC--CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AVD--GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~~--~~d 81 (258)
.+.+|||+||+|.+|...++.+...|.+|+++++++.+.. ...++ ... . ..|..+.+..+. ... ++|
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~--~~~~l---ga~--~-~~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE--ELLRL---GAA--Y-VIDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH--HHHHH---TCS--E-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH--HHHhC---CCc--E-EEeCCcccHHHHHHHHhCCCCCc
Confidence 4679999999999999999999889999999998775542 22222 111 1 235555433332 222 689
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||++++.
T Consensus 216 vvid~~g~ 223 (340)
T 3gms_A 216 AAIDSIGG 223 (340)
T ss_dssp EEEESSCH
T ss_pred EEEECCCC
Confidence 99999986
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00026 Score=58.57 Aligned_cols=75 Identities=19% Similarity=0.190 Sum_probs=49.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCC-Cc-ccHHHHhC--CCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EE-GSFDSAVD--GCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~-~~~~~~~~--~~d~ 82 (258)
.+.+|||+||+|.+|...++.+...|.+|+++++++.+.. ...++ ... .. .|.. +. +.+.+... ++|+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~--~~~~~---ga~-~v--~~~~~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE--FVKSV---GAD-IV--LPLEEGWAKAVREATGGAGVDM 230 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH--HHHHH---TCS-EE--EESSTTHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH--HHHhc---CCc-EE--ecCchhHHHHHHHHhCCCCceE
Confidence 4679999999999999999999999999999998664432 22222 111 12 2333 11 12223332 5999
Q ss_pred EEecCCC
Q 025065 83 VFHTASP 89 (258)
Q Consensus 83 Vih~a~~ 89 (258)
||++++.
T Consensus 231 vid~~g~ 237 (342)
T 4eye_A 231 VVDPIGG 237 (342)
T ss_dssp EEESCC-
T ss_pred EEECCch
Confidence 9999986
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00012 Score=59.71 Aligned_cols=35 Identities=29% Similarity=0.316 Sum_probs=31.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
||+|.|+|+ |.+|+.++..|.+.|++|++++|++.
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~ 37 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPA 37 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 468999997 99999999999999999999988753
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00097 Score=54.37 Aligned_cols=78 Identities=22% Similarity=0.177 Sum_probs=49.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCC-CCccc-hh--hcccc-CcCCcEEEEEccCCCcccHHHHhCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP-NSPKT-EH--LRELD-GATERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~-~~~~~-~~--~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
+.+||.|+|+ |.+|+.++..|...|+ +|+++++++ ..... .. +.... ........... .+ .+.++++
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d----~~a~~~a 79 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SD----YADTADS 79 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SC----GGGGTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CC----HHHhCCC
Confidence 4579999997 9999999999999999 999999873 11111 11 11100 00011111111 11 2467899
Q ss_pred cEEEecCCCCC
Q 025065 81 DGVFHTASPVI 91 (258)
Q Consensus 81 d~Vih~a~~~~ 91 (258)
|+||-++|...
T Consensus 80 DvVIiaag~p~ 90 (315)
T 3tl2_A 80 DVVVITAGIAR 90 (315)
T ss_dssp SEEEECCSCCC
T ss_pred CEEEEeCCCCC
Confidence 99999999754
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00031 Score=58.39 Aligned_cols=34 Identities=29% Similarity=0.387 Sum_probs=29.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRD 41 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~ 41 (258)
++||.|.||+|++|+.+++.|.+.+ .+|+++.++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s 42 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS 42 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 3689999999999999999998765 588888653
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00043 Score=56.09 Aligned_cols=36 Identities=17% Similarity=0.325 Sum_probs=32.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
+++|.|+||.|.+|+.++..|.+.|++|++++|++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 468999998899999999999999999999987653
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0003 Score=58.70 Aligned_cols=71 Identities=18% Similarity=0.263 Sum_probs=49.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC---CCccchhhccccCcCCcEEEEEccCCCcccHHHH---hCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP---NSPKTEHLRELDGATERLHLFKANLLEEGSFDSA---VDGC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~---~~~~ 80 (258)
++++|||+|+ |.+|..+++.+...|.+|++++++. ++. +...++ +.+.+ | .+ +..+.+ -.++
T Consensus 180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~--~~~~~~-----ga~~v--~-~~-~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ--TVIEET-----KTNYY--N-SS-NGYDKLKDSVGKF 247 (366)
T ss_dssp TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH--HHHHHH-----TCEEE--E-CT-TCSHHHHHHHCCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH--HHHHHh-----CCcee--c-hH-HHHHHHHHhCCCC
Confidence 3789999999 9999999999999999999999876 222 122221 23444 5 44 222222 1469
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+||++++.
T Consensus 248 d~vid~~g~ 256 (366)
T 2cdc_A 248 DVIIDATGA 256 (366)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999986
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00075 Score=56.56 Aligned_cols=70 Identities=17% Similarity=0.230 Sum_probs=53.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
||+|+|+|+ |.+|+.++++|.+.|++|++++..+..... .. . -..+..|..|.+.+.+++.++|.|+...
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~----~~----~-~~~~~~~~~d~~~l~~~~~~~d~v~~~~ 70 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAG----QV----A-DEQIVAGFFDSERIEDLVKGSDVTTYDL 70 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTG----GG----S-SEEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh----hh----C-ceEEECCCCCHHHHHHHHhcCCEEEecc
Confidence 368999997 899999999999999999998865433211 11 1 1356788889888888888899988543
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=9.2e-05 Score=59.27 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=49.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
++++++|+|+ |.+|+.++..|.+.|. +|++.+|+.++... +. ..+..+ ..+++.+.+.++|+||+
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~--la------~~~~~~-----~~~~~~~~~~~aDiVIn 181 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN--WS------LNINKI-----NLSHAESHLDEFDIIIN 181 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT--CC------SCCEEE-----CHHHHHHTGGGCSEEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH--HH------Hhcccc-----cHhhHHHHhcCCCEEEE
Confidence 5689999997 8999999999999998 89999988654321 11 112211 23446666788999999
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 182 aTp~ 185 (277)
T 3don_A 182 TTPA 185 (277)
T ss_dssp CCC-
T ss_pred CccC
Confidence 8765
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0012 Score=53.08 Aligned_cols=103 Identities=17% Similarity=0.107 Sum_probs=64.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCc----------------cc-hhhccccCcCC--cEEEEEcc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSP----------------KT-EHLRELDGATE--RLHLFKAN 66 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~-~~~~~~~~~~~--~~~~~~~D 66 (258)
+.++|+|.|+ |.+|+++++.|...|. +++++|.+.-+. +. ...+.+...++ .++.+..+
T Consensus 35 ~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~ 113 (292)
T 3h8v_A 35 RTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYN 113 (292)
T ss_dssp GGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred hCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEeccc
Confidence 4579999998 9999999999999994 788888664211 11 01111111233 45566667
Q ss_pred CCCcccHHHHh-----------CCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 67 LLEEGSFDSAV-----------DGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 67 l~~~~~~~~~~-----------~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
+++.+.+.+++ +++|+||++... -.++.. +.+++.+.+++++..
T Consensus 114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn------------~~~R~~----in~~c~~~~~Pli~~ 168 (292)
T 3h8v_A 114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN------------FEARMT----INTACNELGQTWMES 168 (292)
T ss_dssp TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS------------HHHHHH----HHHHHHHHTCCEEEE
T ss_pred CCcHHHHHHHhhhhcccccccCCCCCEEEECCcc------------hhhhhH----HHHHHHHhCCCEEEe
Confidence 77655566554 579999977655 223333 444466668887643
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00019 Score=52.46 Aligned_cols=73 Identities=16% Similarity=0.148 Sum_probs=50.3
Q ss_pred cchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCc--ccHHHHhC------CCcEEEec
Q 025065 17 SGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEE--GSFDSAVD------GCDGVFHT 86 (258)
Q Consensus 17 ~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~------~~d~Vih~ 86 (258)
+|+++...++.|.+.|.+|++..|+...... .........+..+..+.+|++++ +++.++++ +-|++|||
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn 104 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC 104 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence 3688999999999999999887776543211 00111111134567788999998 77776543 23999999
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
||.
T Consensus 105 Agg 107 (157)
T 3gxh_A 105 LAN 107 (157)
T ss_dssp SBS
T ss_pred CCC
Confidence 997
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.29 E-value=8.6e-05 Score=59.93 Aligned_cols=79 Identities=14% Similarity=0.143 Sum_probs=49.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcC-CcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGAT-ERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+++++++|||++ .+|+.++.+|.+.| +|++.+|+.++... ....+.... ... .+.+|+.+. .+.+.++|+||
T Consensus 126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~-l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~DilV 198 (287)
T 1nvt_A 126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEA-LAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDIII 198 (287)
T ss_dssp CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHH-HHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCEEE
T ss_pred cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHH-HHHHHhhhccccc-ceeEEEeeH---HHhhCCCCEEE
Confidence 457899999985 99999999999999 99999887543211 001110000 000 011233331 33456799999
Q ss_pred ecCCCCC
Q 025065 85 HTASPVI 91 (258)
Q Consensus 85 h~a~~~~ 91 (258)
|+++...
T Consensus 199 n~ag~~~ 205 (287)
T 1nvt_A 199 NATPIGM 205 (287)
T ss_dssp ECSCTTC
T ss_pred ECCCCCC
Confidence 9998743
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00017 Score=55.75 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=32.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEE-EEcCCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKA-TVRDPNS 44 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~-~~r~~~~ 44 (258)
|+||||.|+| +|.+|+.+++.|.+.|++|++ .+|+++.
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~ 59 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPAS 59 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGG
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHH
Confidence 3467999999 599999999999999999998 6776543
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00098 Score=55.47 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=50.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCC-CcccHHHHhCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~Vih~ 86 (258)
||+|+|+|| |..|..++..+.+.|++|++++.++...... . . -+++..|.. +.+.+....+++|+|+-.
T Consensus 1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~----~----a-D~~~~~~~~~d~~~~~~~~~~~D~v~~~ 70 (363)
T 4ffl_A 1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRN----Y----A-DEFYCFDVIKEPEKLLELSKRVDAVLPV 70 (363)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTT----T----S-SEEEECCTTTCHHHHHHHHTSSSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHh----h----C-CEEEECCCCcCHHHHHHHhcCCCEEEEC
Confidence 589999996 8999999999999999999998765443211 0 1 134555644 556666667789998754
Q ss_pred CC
Q 025065 87 AS 88 (258)
Q Consensus 87 a~ 88 (258)
.+
T Consensus 71 ~~ 72 (363)
T 4ffl_A 71 NE 72 (363)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00017 Score=58.63 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=32.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
++|+|.|+|. |.+|+.+++.|.+.|++|++.+|++..
T Consensus 6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~ 42 (303)
T 3g0o_A 6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQA 42 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence 4578999985 999999999999999999999987643
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00029 Score=59.12 Aligned_cols=77 Identities=19% Similarity=0.105 Sum_probs=54.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|+|+|+ |-+|+.+++.+...|.+|++++|++.+.. ...+.- ...+ ..+..+.+++.+.+.++|+||+
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~--~~~~~~--g~~~---~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLR--QLDAEF--CGRI---HTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHT--TTSS---EEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH--HHHHhc--CCee---EeccCCHHHHHHHHcCCCEEEE
Confidence 45789999998 99999999999999999999998764321 111100 1111 1233345567778888999999
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+++..
T Consensus 238 ~~~~p 242 (377)
T 2vhw_A 238 AVLVP 242 (377)
T ss_dssp CCCCT
T ss_pred CCCcC
Confidence 88764
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00028 Score=58.87 Aligned_cols=74 Identities=23% Similarity=0.272 Sum_probs=49.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-----CCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~d 81 (258)
.+.+|||+||+|.+|..+++.+...|.+|+++++++.+. +...++ +.+. ..|..+.+ +.+.+ .++|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~--~~~~~~-----Ga~~-~~~~~~~~-~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS--AFLKSL-----GCDR-PINYKTEP-VGTVLKQEYPEGVD 233 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT-----TCSE-EEETTTSC-HHHHHHHHCTTCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH--HHHHHc-----CCcE-EEecCChh-HHHHHHHhcCCCCC
Confidence 467999999999999999999999999999999864332 112221 1111 23444432 33222 2589
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||++++.
T Consensus 234 ~vid~~g~ 241 (362)
T 2c0c_A 234 VVYESVGG 241 (362)
T ss_dssp EEEECSCT
T ss_pred EEEECCCH
Confidence 99999884
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00022 Score=58.10 Aligned_cols=39 Identities=31% Similarity=0.399 Sum_probs=33.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
..++++|.|+|. |.+|+.+++.|.+.|++|++.+|++..
T Consensus 6 ~~~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~ 44 (306)
T 3l6d_A 6 ESFEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGK 44 (306)
T ss_dssp CCCSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred ccCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 345678999985 999999999999999999999887643
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0014 Score=52.12 Aligned_cols=58 Identities=24% Similarity=0.171 Sum_probs=48.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|.|+++.+|+.++..|+..|..|++..++. .++.+.++++|+||.
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI~ 210 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT----------------------------TDLKSHTTKADILIV 210 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SSHHHHHTTCSEEEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHhcccCCEEEE
Confidence 5789999999999999999999999999998876532 246678889999999
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
.++...
T Consensus 211 Avg~p~ 216 (285)
T 3l07_A 211 AVGKPN 216 (285)
T ss_dssp CCCCTT
T ss_pred CCCCCC
Confidence 887643
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00054 Score=56.84 Aligned_cols=75 Identities=20% Similarity=0.147 Sum_probs=48.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEE------ccC-CCcccHHHHhCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFK------ANL-LEEGSFDSAVDGC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------~Dl-~~~~~~~~~~~~~ 80 (258)
+|||.|.|+ |.+|+.++..|.+.|++|++++|++.... .+.+. .++.... ..+ ....++.+++.++
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIK--EIQDR----GAIIAEGPGLAGTAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH--HHHHH----TSEEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH--HHHhc----CCeEEeccccccccccceecCCHHHHHhcC
Confidence 478999997 99999999999999999999988654321 11110 0111110 111 1123566677889
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+||-+...
T Consensus 77 D~vi~~v~~ 85 (359)
T 1bg6_A 77 DVILIVVPA 85 (359)
T ss_dssp SEEEECSCG
T ss_pred CEEEEeCCc
Confidence 999977654
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00031 Score=57.97 Aligned_cols=32 Identities=34% Similarity=0.407 Sum_probs=26.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC---EEEEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY---TVKATV 39 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~---~V~~~~ 39 (258)
++||+|.||+|++|+.|++.|.++++ +++++.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 36899999999999999999997654 456554
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0015 Score=51.59 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=65.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---h---------------hhccccCcCCc--EEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---E---------------HLRELDGATER--LHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~---------------~~~~~~~~~~~--~~~~~~ 65 (258)
+.++|+|.|+ |.+|+++++.|...|. ++++++++.-...- + ..+.+...++. ++.+..
T Consensus 27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 105 (251)
T 1zud_1 27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ 105 (251)
T ss_dssp HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence 3578999998 6699999999999995 78888765422100 0 00111111233 344444
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
+++ .+.+.++++++|+||++... -.++. .+..++.+.+++++.......+|
T Consensus 106 ~~~-~~~~~~~~~~~DvVi~~~d~------------~~~r~----~l~~~~~~~~~p~i~~~~~g~~G 156 (251)
T 1zud_1 106 RLT-GEALKDAVARADVVLDCTDN------------MATRQ----EINAACVALNTPLITASAVGFGG 156 (251)
T ss_dssp CCC-HHHHHHHHHHCSEEEECCSS------------HHHHH----HHHHHHHHTTCCEEEEEEEBTEE
T ss_pred cCC-HHHHHHHHhcCCEEEECCCC------------HHHHH----HHHHHHHHhCCCEEEEeccccce
Confidence 443 34567788889999987643 12333 33444566688877665444444
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00086 Score=55.97 Aligned_cols=75 Identities=19% Similarity=0.219 Sum_probs=53.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+.+|||+|+ |-+|...++.+...|.+|+++++++.+... ...++ +.+ ...|..+.+.+.++..++|+||++
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~~~~l-----Ga~-~v~~~~~~~~~~~~~~~~D~vid~ 258 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEE-ALKNF-----GAD-SFLVSRDQEQMQAAAGTLDGIIDT 258 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHH-HHHTS-----CCS-EEEETTCHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhc-----CCc-eEEeccCHHHHHHhhCCCCEEEEC
Confidence 4679999996 999999999999999999999887543211 01111 111 124556655666666789999999
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
++.
T Consensus 259 ~g~ 261 (366)
T 1yqd_A 259 VSA 261 (366)
T ss_dssp CSS
T ss_pred CCc
Confidence 986
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0042 Score=50.94 Aligned_cols=117 Identities=9% Similarity=-0.013 Sum_probs=64.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccch--hhccccCcCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTE--HLRELDGATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
+..+||.|+|+ |.+|+.++..|+.+|. +|+.++++....... -+............+.. .+ ++ .++++|
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d---~~-~~~~aD 89 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KD---YS-VTANSK 89 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SS---GG-GGTTEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CC---HH-HhCCCC
Confidence 35689999998 9999999999999886 899998764322111 11111100111122221 12 22 488999
Q ss_pred EEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 82 GVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 82 ~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
+||.+||..........+.....-....++..... ++..+..++-.++
T Consensus 90 iVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~-~~~p~a~vlvvtN 137 (331)
T 4aj2_A 90 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVV-KYSPQCKLLIVSN 137 (331)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHH-HHCTTCEEEECSS
T ss_pred EEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHH-HHCCCeEEEEecC
Confidence 99999998543222222333333233333333333 2345555554443
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0068 Score=49.94 Aligned_cols=81 Identities=17% Similarity=0.078 Sum_probs=50.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-------EEEEEEcCCCCccch--h--hccccCcCCcEEEEEccCCCcccHH
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-------TVKATVRDPNSPKTE--H--LRELDGATERLHLFKANLLEEGSFD 74 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~--~--~~~~~~~~~~~~~~~~Dl~~~~~~~ 74 (258)
|+..||.|+||+|.||+.|+..|..... ++..++..+.....+ . ++.... +.....+.+ .+..
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~-~~~~~~~~~-----~~~~ 95 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAF-PLLDKVVVT-----ADPR 95 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTC-TTEEEEEEE-----SCHH
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCc-cCCCcEEEc-----CChH
Confidence 4556999999999999999998887542 677777643221110 1 111110 111122221 2356
Q ss_pred HHhCCCcEEEecCCCCCC
Q 025065 75 SAVDGCDGVFHTASPVIF 92 (258)
Q Consensus 75 ~~~~~~d~Vih~a~~~~~ 92 (258)
+.++++|+||-+||...-
T Consensus 96 ~a~~~advVvi~aG~prk 113 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPRK 113 (345)
T ss_dssp HHTTTCSEEEECCCCCCC
T ss_pred HHhCCCCEEEECCCCCCC
Confidence 789999999999998643
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0016 Score=51.90 Aligned_cols=57 Identities=28% Similarity=0.155 Sum_probs=47.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|.|++|.+|+.++..|+..|..|++..++. .++.+.++++|+||.
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T----------------------------~~L~~~~~~ADIVI~ 210 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT----------------------------RDLADHVSRADLVVV 210 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC----------------------------SCHHHHHHTCSEEEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC----------------------------cCHHHHhccCCEEEE
Confidence 4789999999999999999999999999999876532 136677888999998
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
.++..
T Consensus 211 Avg~p 215 (286)
T 4a5o_A 211 AAGKP 215 (286)
T ss_dssp CCCCT
T ss_pred CCCCC
Confidence 88753
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00047 Score=55.14 Aligned_cols=75 Identities=17% Similarity=0.117 Sum_probs=48.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.++++++|+|+ |.+|+.++..|.+.|.+|++.+|+.++... ....... ...+.. .|+. ++.+ .++|+||+
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~-l~~~~~~-~~~~~~--~~~~---~~~~--~~~DivIn 186 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKE-LAERFQP-YGNIQA--VSMD---SIPL--QTYDLVIN 186 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHH-HHHHHGG-GSCEEE--EEGG---GCCC--SCCSEEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHccc-cCCeEE--eeHH---Hhcc--CCCCEEEE
Confidence 35789999998 779999999999999999999998644321 0111110 002222 2321 1110 37999999
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+++..
T Consensus 187 ~t~~~ 191 (272)
T 1p77_A 187 ATSAG 191 (272)
T ss_dssp CCCC-
T ss_pred CCCCC
Confidence 99874
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00027 Score=58.78 Aligned_cols=77 Identities=12% Similarity=0.186 Sum_probs=48.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc---CcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD---GATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
++|||.|.|+ |.+|..++..|.+.|++|++.+|++..... +.... ...+++.+ ...+.-..++.++++++|+|
T Consensus 28 ~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~--i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDvV 103 (356)
T 3k96_A 28 FKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDE--MQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTDI 103 (356)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHH--HHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCEE
T ss_pred cCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH--HHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCEE
Confidence 3578999997 999999999999999999999987543211 11100 00011110 11111124566778888988
Q ss_pred EecC
Q 025065 84 FHTA 87 (258)
Q Consensus 84 ih~a 87 (258)
|-+.
T Consensus 104 ilaV 107 (356)
T 3k96_A 104 LIVV 107 (356)
T ss_dssp EECC
T ss_pred EECC
Confidence 8554
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00057 Score=55.33 Aligned_cols=37 Identities=8% Similarity=-0.070 Sum_probs=32.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
+++|.|+|. |.+|..+++.|.+.|++|++.+|++...
T Consensus 15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~ 51 (296)
T 3qha_A 15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAM 51 (296)
T ss_dssp CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 468999985 9999999999999999999999987654
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00068 Score=55.26 Aligned_cols=39 Identities=21% Similarity=0.211 Sum_probs=34.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
.++|+|.|+|. |.+|..+++.|.+.|++|++.+|++...
T Consensus 19 ~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~ 57 (310)
T 3doj_A 19 SHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKC 57 (310)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 35689999986 9999999999999999999999876543
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0013 Score=52.02 Aligned_cols=57 Identities=23% Similarity=0.201 Sum_probs=47.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|.|+++.+|+.++..|+..|.+|++..++. .++.+.++++|+||.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t----------------------------~~L~~~~~~ADIVI~ 199 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT----------------------------KDIGSMTRSSKIVVV 199 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SCHHHHHHHSSEEEE
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc----------------------------ccHHHhhccCCEEEE
Confidence 4689999999999999999999999999999876532 236677788899998
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
..+..
T Consensus 200 Avg~p 204 (276)
T 3ngx_A 200 AVGRP 204 (276)
T ss_dssp CSSCT
T ss_pred CCCCC
Confidence 88763
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0016 Score=52.27 Aligned_cols=57 Identities=21% Similarity=0.170 Sum_probs=47.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHH--HHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFD--SAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~--~~~~~~d~V 83 (258)
..+++++|.|++|.+|+.++..|+..|.+|++..|+.. ++. +.++++|+|
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~----------------------------~l~l~~~~~~ADIV 214 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS----------------------------TEDMIDYLRTADIV 214 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC----------------------------HHHHHHHHHTCSEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC----------------------------CchhhhhhccCCEE
Confidence 46899999999999999999999999999998876431 233 778889999
Q ss_pred EecCCCC
Q 025065 84 FHTASPV 90 (258)
Q Consensus 84 ih~a~~~ 90 (258)
|..++..
T Consensus 215 I~Avg~p 221 (300)
T 4a26_A 215 IAAMGQP 221 (300)
T ss_dssp EECSCCT
T ss_pred EECCCCC
Confidence 9888864
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00025 Score=58.90 Aligned_cols=32 Identities=25% Similarity=0.392 Sum_probs=25.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC---EEEEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY---TVKATV 39 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~---~V~~~~ 39 (258)
++||.|.||||++|+.|++.|.+.+| ++..+.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a 36 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 36 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence 46899999999999999999888765 344444
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00032 Score=57.83 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=28.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC---CEEEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG---YTVKATVR 40 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g---~~V~~~~r 40 (258)
+++||.|.||+|++|+.+++.|.+++ .+++++..
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s 38 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLAS 38 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEEC
Confidence 35799999999999999999999873 46777663
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0038 Score=50.95 Aligned_cols=77 Identities=17% Similarity=0.108 Sum_probs=49.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccc--hhhccc-cCcCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKT--EHLREL-DGATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
+++||.|+|+ |.+|..++..|...| .+|..+++++..... ..+... ...+..++... | + .+.++++|
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~aD 76 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDAD 76 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCCC
Confidence 4579999999 999999999999887 489888876422211 111111 11112333332 2 2 34588999
Q ss_pred EEEecCCCCC
Q 025065 82 GVFHTASPVI 91 (258)
Q Consensus 82 ~Vih~a~~~~ 91 (258)
+||.+++...
T Consensus 77 vVvi~ag~~~ 86 (317)
T 3d0o_A 77 LVVICAGAAQ 86 (317)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCCCC
Confidence 9999998753
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00058 Score=56.56 Aligned_cols=73 Identities=12% Similarity=0.118 Sum_probs=49.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHH---HHh--CCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFD---SAV--DGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~--~~~d~V 83 (258)
++++|+||+|.+|...++.+...|.+|+++++++.+. +...++ +.+. ..|..+.+..+ +.. .++|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~--~~~~~~-----Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI--ALLKDI-----GAAH-VLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH--HHHHHH-----TCSE-EEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHc-----CCCE-EEECCcHHHHHHHHHHhcCCCCcEE
Confidence 6899999999999999999999999999999866443 222222 1111 23444433222 222 269999
Q ss_pred EecCCC
Q 025065 84 FHTASP 89 (258)
Q Consensus 84 ih~a~~ 89 (258)
|++++.
T Consensus 238 id~~g~ 243 (349)
T 3pi7_A 238 LDAVTG 243 (349)
T ss_dssp EESSCH
T ss_pred EECCCC
Confidence 999885
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00034 Score=57.09 Aligned_cols=35 Identities=23% Similarity=0.101 Sum_probs=30.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP 42 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~ 42 (258)
.+|+|.|+|. |.+|..+++.|.+.|+ +|++.+|++
T Consensus 23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 23 NAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 4679999996 9999999999999999 999999863
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0016 Score=53.07 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=50.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+|.|.|. |-||+.+++.|...|++|++.+|++.... ++....+ .+++.++++++|+|+.
T Consensus 137 l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~------------~~~~~~~----~~~l~ell~~aDiV~l 199 (315)
T 3pp8_A 137 REEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWP------------GVESYVG----REELRAFLNQTRVLIN 199 (315)
T ss_dssp STTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCT------------TCEEEES----HHHHHHHHHTCSEEEE
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhh------------hhhhhcc----cCCHHHHHhhCCEEEE
Confidence 46789999996 99999999999999999999998765321 1221111 2567888999999887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.-.
T Consensus 200 ~~Pl 203 (315)
T 3pp8_A 200 LLPN 203 (315)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 6654
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00061 Score=56.32 Aligned_cols=72 Identities=24% Similarity=0.283 Sum_probs=48.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc---HHHHh--CCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAV--DGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~--~~~d 81 (258)
.+.+|||+||+|.+|...++.+...|.+|+++ +++.+. +...++ +.+. .| .+.+. +.+.. .++|
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~--~~~~~l-----Ga~~--i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL--EYVRDL-----GATP--ID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH--HHHHHH-----TSEE--EE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH--HHHHHc-----CCCE--ec-cCCCHHHHHHHHhcCCCce
Confidence 46799999999999999999999999999988 544322 222222 2333 34 33222 22222 2699
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||++++.
T Consensus 219 ~vid~~g~ 226 (343)
T 3gaz_A 219 LVYDTLGG 226 (343)
T ss_dssp EEEESSCT
T ss_pred EEEECCCc
Confidence 99999884
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00091 Score=53.81 Aligned_cols=36 Identities=25% Similarity=0.368 Sum_probs=32.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
|+|.|+|. |.+|+.+++.|.+.|++|++.+|++...
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 37 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKA 37 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 68999996 9999999999999999999999876543
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0023 Score=53.73 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=52.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 84 (258)
++|+|||+|+ |.+|..+++.+.+.|++|++++..+..... . . .-..+..|..|.+.+.++++ ++|.|+
T Consensus 10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~---~-~-----~d~~~~~~~~d~~~l~~~~~~~~~d~v~ 79 (391)
T 1kjq_A 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM---H-V-----AHRSHVINMLDGDALRRVVELEKPHYIV 79 (391)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG---G-G-----SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh---h-h-----ccceEECCCCCHHHHHHHHHHcCCCEEE
Confidence 4579999987 789999999999999999999876533211 1 0 11356678888888887775 799998
Q ss_pred ecC
Q 025065 85 HTA 87 (258)
Q Consensus 85 h~a 87 (258)
...
T Consensus 80 ~~~ 82 (391)
T 1kjq_A 80 PEI 82 (391)
T ss_dssp ECS
T ss_pred ECC
Confidence 643
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00066 Score=56.03 Aligned_cols=74 Identities=24% Similarity=0.227 Sum_probs=50.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc---HHHHhCCCcEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAVDGCDGV 83 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~d~V 83 (258)
.+++|||+|+ |.+|..+++.+...|.+|+++++++.+. +...++ +.+. ..|..+.+. +.+...++|+|
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~--~~~~~l-----Ga~~-~~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL--ELAKEL-----GADL-VVNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH--HHHHHT-----TCSE-EECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHC-----CCCE-EecCCCccHHHHHHHHhCCCCEE
Confidence 4679999999 6699999999999999999998865332 112221 1221 246665432 22222579999
Q ss_pred EecCCC
Q 025065 84 FHTASP 89 (258)
Q Consensus 84 ih~a~~ 89 (258)
|++++.
T Consensus 235 id~~g~ 240 (339)
T 1rjw_A 235 VVTAVS 240 (339)
T ss_dssp EESSCC
T ss_pred EECCCC
Confidence 999885
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0012 Score=53.67 Aligned_cols=75 Identities=17% Similarity=0.191 Sum_probs=47.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCc----CCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGA----TERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
+||.|+|+ |.+|..++..|...|+ +|++++++........ ..+... ....+... ..++ +.++++|+|
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~-~dl~~~~~~~~~~~~i~~-----t~d~-~a~~~aD~V 74 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKA-LDLYEASPIEGFDVRVTG-----TNNY-ADTANSDVI 74 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHH-HHHHTTHHHHTCCCCEEE-----ESCG-GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHH-HhHHHhHhhcCCCeEEEE-----CCCH-HHHCCCCEE
Confidence 68999999 9999999999999996 8888887653321111 111110 01111111 1223 458899999
Q ss_pred EecCCCCC
Q 025065 84 FHTASPVI 91 (258)
Q Consensus 84 ih~a~~~~ 91 (258)
|.+++...
T Consensus 75 i~a~g~p~ 82 (309)
T 1ur5_A 75 VVTSGAPR 82 (309)
T ss_dssp EECCCC--
T ss_pred EEcCCCCC
Confidence 99998743
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00078 Score=54.40 Aligned_cols=76 Identities=17% Similarity=0.052 Sum_probs=49.2
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchh--hcccc-CcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEH--LRELD-GATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|||.|+|+ |.+|..++..|...|+ +|+.+++++....... +.... ..+........ .+ .+.++++|+|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t-----~d-~~a~~~aDiV 73 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-----AD-YSLLKGSEII 73 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-----SC-GGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe-----CC-HHHhCCCCEE
Confidence 48999999 9999999999999887 8999998764422111 11100 00111222211 11 3468899999
Q ss_pred EecCCCCC
Q 025065 84 FHTASPVI 91 (258)
Q Consensus 84 ih~a~~~~ 91 (258)
|.+++...
T Consensus 74 Viaag~~~ 81 (294)
T 1oju_A 74 VVTAGLAR 81 (294)
T ss_dssp EECCCCCC
T ss_pred EECCCCCC
Confidence 99998753
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00091 Score=55.65 Aligned_cols=74 Identities=19% Similarity=0.088 Sum_probs=50.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc-ccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~Vih 85 (258)
.+.+|||+|+ |-+|...++.+...|.+|+++++++.+.. ...++ +.+. ..|..+. +..+++..++|+||+
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~--~~~~l-----Ga~~-v~~~~~~~~~~~~~~~~~D~vid 249 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE--DAMKM-----GADH-YIATLEEGDWGEKYFDTFDLIVV 249 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH--HHHHH-----TCSE-EEEGGGTSCHHHHSCSCEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH--HHHHc-----CCCE-EEcCcCchHHHHHhhcCCCEEEE
Confidence 4679999999 99999999998888999999998765532 22221 1111 1344444 333333357999999
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+++.
T Consensus 250 ~~g~ 253 (360)
T 1piw_A 250 CASS 253 (360)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 9986
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0027 Score=53.07 Aligned_cols=75 Identities=17% Similarity=0.176 Sum_probs=50.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh--CCCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV--DGCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~Vi 84 (258)
.+.+|||+||+|-+|...++.+...|.+|+++++ +.+ .+...++ +.+. ..|..+.+..+.+. .++|+||
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~--~~~~~~l-----Ga~~-v~~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDA--SELVRKL-----GADD-VIDYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGG--HHHHHHT-----TCSE-EEETTSSCHHHHHHTSCCBSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHH--HHHHHHc-----CCCE-EEECCchHHHHHHhhcCCCCEEE
Confidence 4679999999999999999999999999988873 322 1222222 1221 23555544333333 3699999
Q ss_pred ecCCCC
Q 025065 85 HTASPV 90 (258)
Q Consensus 85 h~a~~~ 90 (258)
++++..
T Consensus 254 d~~g~~ 259 (375)
T 2vn8_A 254 DNVGGS 259 (375)
T ss_dssp ESSCTT
T ss_pred ECCCCh
Confidence 999863
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0011 Score=53.41 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=32.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
+|+|.|+|+||.+|+.+++.|.+.|++|++.+|++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~ 46 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPE 46 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 468999999999999999999999999999888653
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0014 Score=53.70 Aligned_cols=67 Identities=16% Similarity=0.205 Sum_probs=46.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
++|+|.|+|. |.+|+.+++.|.+.|++|++.+|+++... .+.. .++.. ..++.++++++|+||-+
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~--~l~~-----~g~~~-------~~~~~e~~~~aDvVi~~ 94 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAA--SLAA-----LGATI-------HEQARAAARDADIVVSM 94 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHH--HHHT-----TTCEE-------ESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHH--HHHH-----CCCEe-------eCCHHHHHhcCCEEEEE
Confidence 4579999986 99999999999999999999988764321 1111 12211 23466667777877765
Q ss_pred CC
Q 025065 87 AS 88 (258)
Q Consensus 87 a~ 88 (258)
..
T Consensus 95 vp 96 (320)
T 4dll_A 95 LE 96 (320)
T ss_dssp CS
T ss_pred CC
Confidence 54
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0016 Score=52.73 Aligned_cols=71 Identities=20% Similarity=0.194 Sum_probs=52.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|+|.|+ |-+|+.+++.|...|.+|++.+|+..+. ..+.+ .++..+ +.+++.++++++|+|+.
T Consensus 155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~--~~~~~-----~g~~~~-----~~~~l~~~l~~aDvVi~ 221 (300)
T 2rir_A 155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHL--ARITE-----MGLVPF-----HTDELKEHVKDIDICIN 221 (300)
T ss_dssp STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHH-----TTCEEE-----EGGGHHHHSTTCSEEEE
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHH-----CCCeEE-----chhhHHHHhhCCCEEEE
Confidence 46789999997 9999999999999999999999875322 11111 122222 12457788889999998
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 222 ~~p~ 225 (300)
T 2rir_A 222 TIPS 225 (300)
T ss_dssp CCSS
T ss_pred CCCh
Confidence 8775
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00085 Score=56.78 Aligned_cols=73 Identities=22% Similarity=0.204 Sum_probs=51.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
..+++|+|+|+ |-+|+.+++.|...|. +|++++|+..+... ....+ +... .+.+++.+.+.++|+||
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~-la~~~-----g~~~-----~~~~~l~~~l~~aDvVi 232 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVE-LARDL-----GGEA-----VRFDELVDHLARSDVVV 232 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHH-HHHHH-----TCEE-----CCGGGHHHHHHTCSEEE
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HHHHc-----CCce-----ecHHhHHHHhcCCCEEE
Confidence 35789999998 9999999999999998 89999887533211 01111 1221 12345777778999999
Q ss_pred ecCCCC
Q 025065 85 HTASPV 90 (258)
Q Consensus 85 h~a~~~ 90 (258)
.+.+..
T Consensus 233 ~at~~~ 238 (404)
T 1gpj_A 233 SATAAP 238 (404)
T ss_dssp ECCSSS
T ss_pred EccCCC
Confidence 997653
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0013 Score=54.60 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=32.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
++|+|.|+|. |.+|+.+++.|.+.|++|++.+|++..
T Consensus 21 ~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~ 57 (358)
T 4e21_A 21 QSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNA 57 (358)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred cCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 4589999995 999999999999999999999987643
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00056 Score=55.03 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=31.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
++|.|+| .|.+|+.+++.|.+.|++|++.+|++...
T Consensus 2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 37 (287)
T 3pdu_A 2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKC 37 (287)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGG
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 5799998 49999999999999999999999876543
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0043 Score=51.27 Aligned_cols=109 Identities=13% Similarity=0.080 Sum_probs=68.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCcc---chh---------------hccccCcCCc--EEEEEc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPK---TEH---------------LRELDGATER--LHLFKA 65 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~---------------~~~~~~~~~~--~~~~~~ 65 (258)
...+|+|.|+ |.+|+++++.|...|. +++++|.+.-... ++. ...+...++. ++.+..
T Consensus 35 ~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~ 113 (346)
T 1y8q_A 35 RASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTE 113 (346)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECS
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEec
Confidence 3578999997 8899999999999996 7888865431111 010 1111122333 455555
Q ss_pred cCCCcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccC
Q 025065 66 NLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134 (258)
Q Consensus 66 Dl~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~ 134 (258)
++.+ ...+.++++|+||.+... ..++ ..+..++.+.+++++......++|.
T Consensus 114 ~~~~--~~~~~~~~~dvVv~~~d~------------~~~r----~~ln~~~~~~~ip~i~~~~~G~~G~ 164 (346)
T 1y8q_A 114 DIEK--KPESFFTQFDAVCLTCCS------------RDVI----VKVDQICHKNSIKFFTGDVFGYHGY 164 (346)
T ss_dssp CGGG--CCHHHHTTCSEEEEESCC------------HHHH----HHHHHHHHHTTCEEEEEEEEBTEEE
T ss_pred ccCc--chHHHhcCCCEEEEcCCC------------HHHH----HHHHHHHHHcCCCEEEEeecccEEE
Confidence 5544 346778899999987543 1222 2344456777888888766666663
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00073 Score=55.30 Aligned_cols=74 Identities=24% Similarity=0.242 Sum_probs=52.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+.+|||+||+|.+|...++.+...|.+|+++++... .+...++ +.+. ..|..+.+.+.+.++++|+||++
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~---~~~~~~l-----Ga~~-~i~~~~~~~~~~~~~g~D~v~d~ 222 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN---HAFLKAL-----GAEQ-CINYHEEDFLLAISTPVDAVIDL 222 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH---HHHHHHH-----TCSE-EEETTTSCHHHHCCSCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch---HHHHHHc-----CCCE-EEeCCCcchhhhhccCCCEEEEC
Confidence 4679999999999999999999999999998874321 1222222 1221 23555554467777889999999
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
++.
T Consensus 223 ~g~ 225 (321)
T 3tqh_A 223 VGG 225 (321)
T ss_dssp SCH
T ss_pred CCc
Confidence 885
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0011 Score=53.56 Aligned_cols=71 Identities=18% Similarity=0.180 Sum_probs=51.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|+|.|+ |-+|+.+++.|...|.+|++.+|+..+. +.... .++..+ +.+++.+++.++|+|+.
T Consensus 153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~--~~~~~-----~g~~~~-----~~~~l~~~l~~aDvVi~ 219 (293)
T 3d4o_A 153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLL--ARIAE-----MGMEPF-----HISKAAQELRDVDVCIN 219 (293)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHH-----TTSEEE-----EGGGHHHHTTTCSEEEE
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHH--HHHHH-----CCCeec-----ChhhHHHHhcCCCEEEE
Confidence 46789999996 9999999999999999999999875332 11111 122322 23457788899999998
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 220 ~~p~ 223 (293)
T 3d4o_A 220 TIPA 223 (293)
T ss_dssp CCSS
T ss_pred CCCh
Confidence 8753
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=7.6e-05 Score=65.40 Aligned_cols=74 Identities=18% Similarity=0.079 Sum_probs=43.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+++++++|||| |.+|+.++.+|.+.|.+|++.+|+.++... ....+ .. ..+ ++.+.+.+ ....+|+|||
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~-la~~~---~~--~~~--~~~dl~~~--~~~~~DilVN 430 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALE-LAEAI---GG--KAL--SLTDLDNY--HPEDGMVLAN 430 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHH-HHHHT---TC---CE--ETTTTTTC----CCSEEEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHc---CC--cee--eHHHhhhc--cccCceEEEE
Confidence 35678999999 799999999999999999999987543211 11111 11 111 12221111 1235899999
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+++..
T Consensus 431 ~agvg 435 (523)
T 2o7s_A 431 TTSMG 435 (523)
T ss_dssp CSSTT
T ss_pred CCCCC
Confidence 99873
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.012 Score=48.14 Aligned_cols=77 Identities=16% Similarity=0.014 Sum_probs=49.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccch--hhccccCcCCcEEEE-EccCCCcccHHHHhCCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTE--HLRELDGATERLHLF-KANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~d 81 (258)
..+||.|+|+ |.+|+.++..|...|. +|++++++....... .+............. ..| .+ . ++++|
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d---~~---~-~~daD 91 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKD---YS---V-SAGSK 91 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESS---SC---S-CSSCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCC---HH---H-hCCCC
Confidence 3579999999 9999999999999886 899998855322111 111110001111222 223 22 2 78899
Q ss_pred EEEecCCCCC
Q 025065 82 GVFHTASPVI 91 (258)
Q Consensus 82 ~Vih~a~~~~ 91 (258)
+||-+||...
T Consensus 92 iVIitaG~p~ 101 (330)
T 3ldh_A 92 LVVITAGARQ 101 (330)
T ss_dssp EEEECCSCCC
T ss_pred EEEEeCCCCC
Confidence 9999999854
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0017 Score=52.25 Aligned_cols=64 Identities=17% Similarity=0.035 Sum_probs=49.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|. |-||+.+++.|...|++|++.+|+..... .+ ...+++.++++++|+|+.
T Consensus 120 l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~------------~~-------~~~~~l~ell~~aDiV~l 179 (290)
T 3gvx_A 120 LYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVDQN------------VD-------VISESPADLFRQSDFVLI 179 (290)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCCTT------------CS-------EECSSHHHHHHHCSEEEE
T ss_pred eecchheeecc-CchhHHHHHHHHhhCcEEEEEeccccccc------------cc-------cccCChHHHhhccCeEEE
Confidence 46789999996 99999999999999999999998764421 11 122467788888999887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 180 ~~P~ 183 (290)
T 3gvx_A 180 AIPL 183 (290)
T ss_dssp CCCC
T ss_pred Eeec
Confidence 7654
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0014 Score=53.93 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=29.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~ 42 (258)
|+||.|.||||++|+.|++.|.+. .+++..+..+.
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~ 39 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA 39 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence 579999999999999999999985 46888775444
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00097 Score=55.57 Aligned_cols=76 Identities=14% Similarity=0.168 Sum_probs=53.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccC------------------C
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL------------------L 68 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl------------------~ 68 (258)
.+.+|+|+|+ |-+|...++.|...|.+|++++|++.... ...++ +.+++..|. .
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~--~~~~l-----Ga~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAE--QVRSV-----GAQWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHH--HHHHT-----TCEECCCC-------------CHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHc-----CCeEEeccccccccccchhhhhHHHHhh
Confidence 4679999998 99999999999999999999998865432 12221 233332211 1
Q ss_pred CcccHHHHhCCCcEEEecCCCC
Q 025065 69 EEGSFDSAVDGCDGVFHTASPV 90 (258)
Q Consensus 69 ~~~~~~~~~~~~d~Vih~a~~~ 90 (258)
+.+.+.+.++++|+||.++...
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iP 276 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVP 276 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCT
T ss_pred hHHHHHHHHhcCCEEEECCCCC
Confidence 2345677889999999887553
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0025 Score=52.48 Aligned_cols=65 Identities=17% Similarity=0.030 Sum_probs=49.1
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
...+|+|.|.|. |-||+.+++.|...|++|++.+|++.... ... ...++.++++++|+|+
T Consensus 168 ~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~------------~~~-------~~~sl~ell~~aDvVi 227 (340)
T 4dgs_A 168 SPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTLSGV------------DWI-------AHQSPVDLARDSDVLA 227 (340)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCTTS------------CCE-------ECSSHHHHHHTCSEEE
T ss_pred cccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCccccc------------Cce-------ecCCHHHHHhcCCEEE
Confidence 346899999997 99999999999999999999988764421 111 1246788899999988
Q ss_pred ecCCC
Q 025065 85 HTASP 89 (258)
Q Consensus 85 h~a~~ 89 (258)
-+...
T Consensus 228 l~vP~ 232 (340)
T 4dgs_A 228 VCVAA 232 (340)
T ss_dssp ECC--
T ss_pred EeCCC
Confidence 76554
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0011 Score=56.92 Aligned_cols=36 Identities=25% Similarity=0.343 Sum_probs=32.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
.+++|||+||+|.||...++.+...|.+|+++++++
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~ 255 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA 255 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 468999999999999999999999999999988754
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0031 Score=49.39 Aligned_cols=33 Identities=27% Similarity=0.304 Sum_probs=28.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQR-GYTVKATVRD 41 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~ 41 (258)
+||.|+|++|-+|+.+++.+.+. ++++.+....
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 47999999999999999999876 8998876643
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0043 Score=50.73 Aligned_cols=67 Identities=9% Similarity=0.162 Sum_probs=50.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|- |-||+.+++.|...|++|++.+|++..... . . .. ....++.++++++|+|+-
T Consensus 138 l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~--~-------~--~~-----~~~~~l~ell~~aDvV~l 200 (324)
T 3hg7_A 138 LKGRTLLILGT-GSIGQHIAHTGKHFGMKVLGVSRSGRERAG--F-------D--QV-----YQLPALNKMLAQADVIVS 200 (324)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCTT--C-------S--EE-----ECGGGHHHHHHTCSEEEE
T ss_pred cccceEEEEEE-CHHHHHHHHHHHhCCCEEEEEcCChHHhhh--h-------h--cc-----cccCCHHHHHhhCCEEEE
Confidence 46789999996 999999999999999999999987633211 0 0 01 124568889999999887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 201 ~lPl 204 (324)
T 3hg7_A 201 VLPA 204 (324)
T ss_dssp CCCC
T ss_pred eCCC
Confidence 7654
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0022 Score=49.06 Aligned_cols=36 Identities=11% Similarity=0.044 Sum_probs=31.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
.+++|.|.| .|.+|+.++..|.+.|++|++.+|++.
T Consensus 18 ~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 467899999 599999999999999999999988653
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0047 Score=50.26 Aligned_cols=76 Identities=18% Similarity=0.134 Sum_probs=47.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchh--hccccC-cCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEH--LRELDG-ATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|||.|+|+ |.+|+.++..|...|. +|+++++++....... +..... ..........| + .+.++++|+|
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV 73 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC 73 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence 58999997 9999999999998886 8999998764422111 111000 01122222111 1 2467899999
Q ss_pred EecCCCCC
Q 025065 84 FHTASPVI 91 (258)
Q Consensus 84 ih~a~~~~ 91 (258)
|-+++...
T Consensus 74 ii~ag~~~ 81 (314)
T 3nep_X 74 IITAGLPR 81 (314)
T ss_dssp EECCCC--
T ss_pred EECCCCCC
Confidence 99999753
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.002 Score=51.69 Aligned_cols=74 Identities=15% Similarity=0.123 Sum_probs=48.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.++++++|+|+ |.+|+.++..|.+.|. +|++.+|+.++... ....+.. ...+... ++.+ +..++|+||
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~-la~~~~~-~~~~~~~--~~~~------l~~~aDiII 192 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQ-LAELVAA-YGEVKAQ--AFEQ------LKQSYDVII 192 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHH-HHHHHGG-GSCEEEE--EGGG------CCSCEEEEE
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHH-HHHHhhc-cCCeeEe--eHHH------hcCCCCEEE
Confidence 35789999998 7899999999999995 99999997644321 0111110 0123332 2222 115799999
Q ss_pred ecCCCC
Q 025065 85 HTASPV 90 (258)
Q Consensus 85 h~a~~~ 90 (258)
++....
T Consensus 193 naTp~g 198 (281)
T 3o8q_A 193 NSTSAS 198 (281)
T ss_dssp ECSCCC
T ss_pred EcCcCC
Confidence 987663
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0035 Score=51.00 Aligned_cols=62 Identities=18% Similarity=0.106 Sum_probs=48.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|. |.||+.+++.|...|++|++.+|+.... . . ...++.++++++|+|+-
T Consensus 142 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~------------~------~---~~~~l~ell~~aDvV~l 199 (311)
T 2cuk_A 142 LQGLTLGLVGM-GRIGQAVAKRALAFGMRVVYHARTPKPL------------P------Y---PFLSLEELLKEADVVSL 199 (311)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSS------------S------S---CBCCHHHHHHHCSEEEE
T ss_pred CCCCEEEEEEE-CHHHHHHHHHHHHCCCEEEEECCCCccc------------c------c---ccCCHHHHHhhCCEEEE
Confidence 46789999986 9999999999999999999998876432 1 1 23457778888999887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 200 ~~p~ 203 (311)
T 2cuk_A 200 HTPL 203 (311)
T ss_dssp CCCC
T ss_pred eCCC
Confidence 6544
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0053 Score=52.81 Aligned_cols=100 Identities=18% Similarity=0.231 Sum_probs=70.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~ 86 (258)
.++|+|.|| |-+|.+|++.|. ++++|.++.++..+... +. ..-++...+.||.+|++-+.+. +.++|+++-+
T Consensus 235 ~~~v~I~Gg-G~ig~~lA~~L~-~~~~v~iIE~d~~r~~~--la---~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~ 307 (461)
T 4g65_A 235 YRRIMIVGG-GNIGASLAKRLE-QTYSVKLIERNLQRAEK--LS---EELENTIVFCGDAADQELLTEENIDQVDVFIAL 307 (461)
T ss_dssp CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHH--HH---HHCTTSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred ccEEEEEcc-hHHHHHHHHHhh-hcCceEEEecCHHHHHH--HH---HHCCCceEEeccccchhhHhhcCchhhcEEEEc
Confidence 468999997 999999999984 56999999877654422 11 1124678999999999988764 5679999955
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 87 ASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 87 a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
.+. ...-..+ ..++++.|.+-++.|...
T Consensus 308 T~~------------De~Ni~~----~llAk~~gv~kvIa~vn~ 335 (461)
T 4g65_A 308 TNE------------DETNIMS----AMLAKRMGAKKVMVLIQR 335 (461)
T ss_dssp CSC------------HHHHHHH----HHHHHHTTCSEEEEECSC
T ss_pred ccC------------cHHHHHH----HHHHHHcCCccccccccc
Confidence 554 1222222 233667799999888654
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0051 Score=49.32 Aligned_cols=58 Identities=21% Similarity=0.159 Sum_probs=48.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|.|++..+|+.+++.|+..|..|++..+.. .++.+.++++|+||.
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI~ 214 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT----------------------------AHLDEEVNKGDILVV 214 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------SSHHHHHTTCSEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc----------------------------ccHHHHhccCCEEEE
Confidence 4689999999988999999999999999999875432 346778888999998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
.++...
T Consensus 215 Avg~p~ 220 (301)
T 1a4i_A 215 ATGQPE 220 (301)
T ss_dssp CCCCTT
T ss_pred CCCCcc
Confidence 887744
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0036 Score=51.20 Aligned_cols=76 Identities=17% Similarity=0.203 Sum_probs=48.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc--hhhccc-cCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT--EHLREL-DGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
++||.|+|| |.+|..++..|...|+ +|+++++++..... ..+... .......+... ..++ +.++++|+|
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~al~~aD~V 76 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-----SNTY-DDLAGADVV 76 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-----ECCG-GGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-----CCCH-HHhCCCCEE
Confidence 478999998 9999999999999998 98888877543221 111110 00001111111 1234 568899999
Q ss_pred EecCCCC
Q 025065 84 FHTASPV 90 (258)
Q Consensus 84 ih~a~~~ 90 (258)
|-+++..
T Consensus 77 i~a~g~p 83 (322)
T 1t2d_A 77 IVTAGFT 83 (322)
T ss_dssp EECCSCS
T ss_pred EEeCCCC
Confidence 9999864
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0053 Score=50.12 Aligned_cols=75 Identities=21% Similarity=0.178 Sum_probs=48.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
.+||.|+|+ |.+|..++..|...+. +++.++++...... ..+.........++... | + .+.++++|+|
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvV 76 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLV 76 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEE
Confidence 369999999 9999999999998775 89999885432211 11111110112333332 2 1 3458899999
Q ss_pred EecCCCC
Q 025065 84 FHTASPV 90 (258)
Q Consensus 84 ih~a~~~ 90 (258)
|.+++..
T Consensus 77 ii~ag~~ 83 (318)
T 1ez4_A 77 VITAGAP 83 (318)
T ss_dssp EECCCC-
T ss_pred EECCCCC
Confidence 9999874
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.01 Score=42.09 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=30.0
Q ss_pred CCcEEEEECCc---chHHHHHHHHHHHCCCEEEEEEcC
Q 025065 7 EEKVVCVTGAS---GFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 7 ~~~~ilItGa~---G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
+.++|.|.|++ |-+|..+++.|++.||+|+.++.+
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~ 50 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN 50 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCC
Confidence 46789999997 899999999999999998776654
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0014 Score=52.52 Aligned_cols=67 Identities=19% Similarity=0.215 Sum_probs=46.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC---EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY---TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
++++|.|+|+ |.+|+.+++.|.+.|+ +|++.+|++.... .+... -++.. ..+..++++++|+|
T Consensus 2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~--~l~~~----~gi~~-------~~~~~~~~~~aDvV 67 (280)
T 3tri_A 2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLD--FFKEK----CGVHT-------TQDNRQGALNADVV 67 (280)
T ss_dssp CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHH--HHHHT----TCCEE-------ESCHHHHHSSCSEE
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHH--HHHHH----cCCEE-------eCChHHHHhcCCeE
Confidence 3578999998 9999999999999998 8999988764321 11110 02221 23455677788888
Q ss_pred EecC
Q 025065 84 FHTA 87 (258)
Q Consensus 84 ih~a 87 (258)
|-+.
T Consensus 68 ilav 71 (280)
T 3tri_A 68 VLAV 71 (280)
T ss_dssp EECS
T ss_pred EEEe
Confidence 8655
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.016 Score=47.20 Aligned_cols=77 Identities=18% Similarity=0.195 Sum_probs=49.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccch--hhcc-ccCcCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTE--HLRE-LDGATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~--~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
+++||.|+|+ |.+|+.++..|...|. +|++++++....... .+.. .......++... | + .+.++++|
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aD 76 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDAD 76 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCC
Confidence 4579999999 9999999999988774 899999875321111 1111 111111333332 1 1 23588999
Q ss_pred EEEecCCCCC
Q 025065 82 GVFHTASPVI 91 (258)
Q Consensus 82 ~Vih~a~~~~ 91 (258)
+||-+++...
T Consensus 77 vViia~~~~~ 86 (316)
T 1ldn_A 77 LVVICAGANQ 86 (316)
T ss_dssp EEEECCSCCC
T ss_pred EEEEcCCCCC
Confidence 9999998754
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0026 Score=51.19 Aligned_cols=65 Identities=14% Similarity=0.093 Sum_probs=44.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
||+|.|+|+ |.+|+.+++.|.+.|++|++.+ ++... +.+.. .+ +....+..+++.++|+||-+.
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~-~~~~~--~~~~~-----~g-------~~~~~~~~~~~~~~D~vi~~v 66 (295)
T 1yb4_A 3 AMKLGFIGL-GIMGSPMAINLARAGHQLHVTT-IGPVA--DELLS-----LG-------AVNVETARQVTEFADIIFIMV 66 (295)
T ss_dssp -CEEEECCC-STTHHHHHHHHHHTTCEEEECC-SSCCC--HHHHT-----TT-------CBCCSSHHHHHHTCSEEEECC
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhCCCEEEEEc-CHHHH--HHHHH-----cC-------CcccCCHHHHHhcCCEEEEEC
Confidence 468999995 9999999999999999998877 54332 11211 01 112234666677788888776
Q ss_pred C
Q 025065 88 S 88 (258)
Q Consensus 88 ~ 88 (258)
.
T Consensus 67 p 67 (295)
T 1yb4_A 67 P 67 (295)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0015 Score=54.00 Aligned_cols=74 Identities=20% Similarity=0.199 Sum_probs=49.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHH---HHhC--CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFD---SAVD--GC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~~--~~ 80 (258)
.+.+|||+|+ |.+|...++.+...|. +|+++++++.+. +...++ +.+. ..|..+.+..+ ++.. ++
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~--~~~~~~-----Ga~~-~~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR--ELAKKV-----GADY-VINPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH--HHHHHH-----TCSE-EECTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH--HHHHHh-----CCCE-EECCCCcCHHHHHHHHcCCCCC
Confidence 4678999999 9999999999999998 999998865332 112221 1221 23555443222 2222 58
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+||++++.
T Consensus 238 D~vid~~g~ 246 (348)
T 2d8a_A 238 DVFLEFSGA 246 (348)
T ss_dssp EEEEECSCC
T ss_pred CEEEECCCC
Confidence 999999885
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0051 Score=49.25 Aligned_cols=76 Identities=20% Similarity=0.194 Sum_probs=47.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC-CCEEEEE-EcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
++.||.|.|++|-+|+.+++.+.+. +.++.+. +++.++..-....++.+ +. ..++.-.+++.+++.++|+||
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G----~~--~~gv~v~~dl~~ll~~aDVvI 93 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIG----SD--FLGVRITDDPESAFSNTEGIL 93 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTT----CS--CCSCBCBSCHHHHTTSCSEEE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhc----cC--cCCceeeCCHHHHhcCCCEEE
Confidence 3568999999999999999998865 5787765 44432211011111111 00 122333356788888999999
Q ss_pred ecCC
Q 025065 85 HTAS 88 (258)
Q Consensus 85 h~a~ 88 (258)
.++.
T Consensus 94 DFT~ 97 (288)
T 3ijp_A 94 DFSQ 97 (288)
T ss_dssp ECSC
T ss_pred EcCC
Confidence 8874
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0023 Score=52.46 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=30.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP 42 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~ 42 (258)
+.++|+|.|+ |.+|+++++.|...|. ++++++++.
T Consensus 33 ~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 3579999998 9999999999999995 788888754
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.00038 Score=55.36 Aligned_cols=36 Identities=31% Similarity=0.524 Sum_probs=31.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCE-EEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYT-VKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~ 43 (258)
++|+|.|+|+ |.+|+.+++.|.+.|++ |.+.+|++.
T Consensus 9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~ 45 (266)
T 3d1l_A 9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEE 45 (266)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHH
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHH
Confidence 3578999997 99999999999999998 788887653
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0037 Score=49.67 Aligned_cols=66 Identities=20% Similarity=0.135 Sum_probs=47.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+++++|+|+ |..|+.++..|.+.|.+|++.+|+.++... +.+. ++... ++.+ + .++|+|||+.
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~--la~~-----~~~~~--~~~~---l----~~~DiVInaT 180 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDF--FQRL-----GCDCF--MEPP---K----SAFDLIINAT 180 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHH--HHHH-----TCEEE--SSCC---S----SCCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--HHHC-----CCeEe--cHHH---h----ccCCEEEEcc
Confidence 689999997 999999999999999999999998765432 2111 12222 2222 2 2799999987
Q ss_pred CCC
Q 025065 88 SPV 90 (258)
Q Consensus 88 ~~~ 90 (258)
...
T Consensus 181 p~G 183 (269)
T 3phh_A 181 SAS 183 (269)
T ss_dssp TTC
T ss_pred cCC
Confidence 663
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0022 Score=50.53 Aligned_cols=68 Identities=29% Similarity=0.378 Sum_probs=49.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
++ +++|+|+ |..|+.++..|.+.|. +|++.+|+.++. +.+. ..+..+ ..+++.+.+.++|+||+
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka-----~~la---~~~~~~-----~~~~~~~~~~~aDiVIn 172 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERA-----KALD---FPVKIF-----SLDQLDEVVKKAKSLFN 172 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHH-----HTCC---SSCEEE-----EGGGHHHHHHTCSEEEE
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH-----HHHH---HHcccC-----CHHHHHhhhcCCCEEEE
Confidence 46 8999997 9999999999999997 899999976432 1111 111111 23456677889999999
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 173 atp~ 176 (253)
T 3u62_A 173 TTSV 176 (253)
T ss_dssp CSST
T ss_pred CCCC
Confidence 8754
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0022 Score=52.46 Aligned_cols=67 Identities=9% Similarity=0.039 Sum_probs=49.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|. |-||+.+++.|...|++|++.+|++..... + . ..+. .+++.++++++|+|+.
T Consensus 135 l~gktvGIiGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~--~-------~--~~~~-----~~~l~ell~~aDvV~l 197 (324)
T 3evt_A 135 LTGQQLLIYGT-GQIGQSLAAKASALGMHVIGVNTTGHPADH--F-------H--ETVA-----FTATADALATANFIVN 197 (324)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSCCCCTT--C-------S--EEEE-----GGGCHHHHHHCSEEEE
T ss_pred ccCCeEEEECc-CHHHHHHHHHHHhCCCEEEEECCCcchhHh--H-------h--hccc-----cCCHHHHHhhCCEEEE
Confidence 46789999996 999999999999999999999987654311 1 0 1111 2456778888999887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.-.
T Consensus 198 ~lPl 201 (324)
T 3evt_A 198 ALPL 201 (324)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 6654
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0013 Score=53.12 Aligned_cols=66 Identities=15% Similarity=0.083 Sum_probs=44.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+++|.|+|+ |.+|+.++..|.+.|++|++.+|++... +.+.. .++.. ..+..+++.++|+||-+.
T Consensus 4 ~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~--~~~~~-----~g~~~-------~~~~~~~~~~~D~vi~~v 68 (301)
T 3cky_A 4 SIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLMEANV--AAVVA-----QGAQA-------CENNQKVAAASDIIFTSL 68 (301)
T ss_dssp CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSHHHH--HHHHT-----TTCEE-------CSSHHHHHHHCSEEEECC
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHH--HHHHH-----CCCee-------cCCHHHHHhCCCEEEEEC
Confidence 478999995 9999999999999999999988765332 11111 12221 123555566688888766
Q ss_pred C
Q 025065 88 S 88 (258)
Q Consensus 88 ~ 88 (258)
.
T Consensus 69 p 69 (301)
T 3cky_A 69 P 69 (301)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0016 Score=51.97 Aligned_cols=73 Identities=23% Similarity=0.210 Sum_probs=47.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.++++++|+|+ |.+|+.++..|.+.|. +|++.+|+.++... ....+.. ..+..+ ++.+ +.. .++|+||
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~-la~~~~~--~~~~~~--~~~~---l~~--~~~DivI 186 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALA-LRNELDH--SRLRIS--RYEA---LEG--QSFDIVV 186 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHH-HHHHHCC--TTEEEE--CSGG---GTT--CCCSEEE
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHhcc--CCeeEe--eHHH---hcc--cCCCEEE
Confidence 35789999998 7899999999999995 99999987644321 1111111 123332 2222 221 6799999
Q ss_pred ecCCC
Q 025065 85 HTASP 89 (258)
Q Consensus 85 h~a~~ 89 (258)
|+...
T Consensus 187 naTp~ 191 (272)
T 3pwz_A 187 NATSA 191 (272)
T ss_dssp ECSSG
T ss_pred ECCCC
Confidence 98765
|
| >2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0014 Score=51.85 Aligned_cols=38 Identities=13% Similarity=-0.010 Sum_probs=32.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC----CEEEEEEcCCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG----YTVKATVRDPNS 44 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g----~~V~~~~r~~~~ 44 (258)
|++|+|.|.|+ |-+|+.++..|.+.| ++|++.+|++..
T Consensus 2 m~~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 2 MENIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp CSSSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence 34578999998 999999999999999 799999887643
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0026 Score=53.48 Aligned_cols=77 Identities=18% Similarity=0.128 Sum_probs=53.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEcc----------------CCC-
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN----------------LLE- 69 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D----------------l~~- 69 (258)
.+.+|+|+|+ |-+|...++.+...|.+|++.++++.+... ...+ +.+++..+ +++
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~--~~~~-----G~~~~~~~~~~~~d~~~~~~ya~e~s~~ 260 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQ--VASL-----GAKFIAVEDEEFKAAETAGGYAKEMSGE 260 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHH--HHHT-----TCEECCCCC-----------------CH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHH--HHHc-----CCceeecccccccccccccchhhhcchh
Confidence 4579999998 999999999999999999999988754321 2111 22232222 222
Q ss_pred -----cccHHHHhCCCcEEEecCCCCC
Q 025065 70 -----EGSFDSAVDGCDGVFHTASPVI 91 (258)
Q Consensus 70 -----~~~~~~~~~~~d~Vih~a~~~~ 91 (258)
.+.+.+.++++|+||.++....
T Consensus 261 ~~~~~~~~l~e~l~~aDVVI~tvlipg 287 (405)
T 4dio_A 261 YQVKQAALVAEHIAKQDIVITTALIPG 287 (405)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred hhhhhHhHHHHHhcCCCEEEECCcCCC
Confidence 2367788889999999876643
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0028 Score=53.23 Aligned_cols=37 Identities=22% Similarity=0.117 Sum_probs=33.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.+++|+|+|+ |-+|...++.+...|.+|++.++++.+
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~ 207 (384)
T 1l7d_A 171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAAT 207 (384)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 5689999996 999999999999999999999987654
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0015 Score=53.97 Aligned_cols=70 Identities=19% Similarity=0.181 Sum_probs=48.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+.+|||+|+ |-+|...++.+...|.+|+++++++.+.. ...++ +.+.+. .+.+.+.+ ++|+||++
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~--~~~~l-----Ga~~v~---~~~~~~~~---~~D~vid~ 241 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ--DALSM-----GVKHFY---TDPKQCKE---ELDFIIST 241 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH--HHHHT-----TCSEEE---SSGGGCCS---CEEEEEEC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH--HHHhc-----CCCeec---CCHHHHhc---CCCEEEEC
Confidence 4679999997 99999999999999999999988765542 22222 122222 33333322 89999999
Q ss_pred CCCC
Q 025065 87 ASPV 90 (258)
Q Consensus 87 a~~~ 90 (258)
++..
T Consensus 242 ~g~~ 245 (348)
T 3two_A 242 IPTH 245 (348)
T ss_dssp CCSC
T ss_pred CCcH
Confidence 8863
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0016 Score=54.42 Aligned_cols=74 Identities=19% Similarity=0.149 Sum_probs=50.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+.+|||+|+ |-+|...++.+...|.+|+++++++.+.. ...++ +.+. ..|..+.+.+.++..++|+||++
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~--~a~~l-----Ga~~-vi~~~~~~~~~~~~~g~Dvvid~ 264 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE--AAKAL-----GADE-VVNSRNADEMAAHLKSFDFILNT 264 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH--HHHHH-----TCSE-EEETTCHHHHHTTTTCEEEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHc-----CCcE-EeccccHHHHHHhhcCCCEEEEC
Confidence 4678999998 78999999999889999999998664432 12221 1111 23455544344444679999999
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
++.
T Consensus 265 ~g~ 267 (369)
T 1uuf_A 265 VAA 267 (369)
T ss_dssp CSS
T ss_pred CCC
Confidence 986
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.002 Score=53.56 Aligned_cols=72 Identities=14% Similarity=0.157 Sum_probs=49.1
Q ss_pred CcEEEEECCcchHHHHH-HHHH-HHCCCE-EEEEEcCCC---CccchhhccccCcCCcEEEEEccCCCccc--HHHHhCC
Q 025065 8 EKVVCVTGASGFVASWL-VKLL-LQRGYT-VKATVRDPN---SPKTEHLRELDGATERLHLFKANLLEEGS--FDSAVDG 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l-~~~L-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~--~~~~~~~ 79 (258)
+.+|||+|+ |-+|... ++.+ ...|.+ |++++++++ +. +...++ +.+.+ |..+.+. +.++-.+
T Consensus 173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~--~~~~~l-----Ga~~v--~~~~~~~~~i~~~~gg 242 (357)
T 2b5w_A 173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI--DIIEEL-----DATYV--DSRQTPVEDVPDVYEQ 242 (357)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH--HHHHHT-----TCEEE--ETTTSCGGGHHHHSCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH--HHHHHc-----CCccc--CCCccCHHHHHHhCCC
Confidence 479999999 9999999 8887 677986 999998765 22 222222 34444 5554322 3333125
Q ss_pred CcEEEecCCC
Q 025065 80 CDGVFHTASP 89 (258)
Q Consensus 80 ~d~Vih~a~~ 89 (258)
+|+||++++.
T Consensus 243 ~Dvvid~~g~ 252 (357)
T 2b5w_A 243 MDFIYEATGF 252 (357)
T ss_dssp EEEEEECSCC
T ss_pred CCEEEECCCC
Confidence 8999999885
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0035 Score=50.92 Aligned_cols=83 Identities=19% Similarity=0.031 Sum_probs=55.1
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcE-EEEEccCCCcccHHHHhCCCcEE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL-HLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
...+++++|.|++..+|+.+++.|+..|.+|++.+|+....... -..+. ... .......++++++.+.++++|+|
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~r-a~~la---~~~~~~t~~~~t~~~~L~e~l~~ADIV 249 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTR-GESLK---LNKHHVEDLGEYSEDLLKKCSLDSDVV 249 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEES-CCCSS---CCCCEEEEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhH-HHHHh---hhcccccccccccHhHHHHHhccCCEE
Confidence 34689999999988999999999999999999988764322110 00010 000 11111112336788899999999
Q ss_pred EecCCCCC
Q 025065 84 FHTASPVI 91 (258)
Q Consensus 84 ih~a~~~~ 91 (258)
|.+++...
T Consensus 250 IsAtg~p~ 257 (320)
T 1edz_A 250 ITGVPSEN 257 (320)
T ss_dssp EECCCCTT
T ss_pred EECCCCCc
Confidence 99888754
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.00051 Score=58.96 Aligned_cols=79 Identities=19% Similarity=0.181 Sum_probs=49.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc--CcCCcEE-EE-----EccCCCcccHHHHhCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD--GATERLH-LF-----KANLLEEGSFDSAVDGC 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~-~~-----~~Dl~~~~~~~~~~~~~ 80 (258)
|||.|+|+ |++|..++..|.+.|++|+++++++..... +..-. ...++.. .+ .+.+.-..++.++++++
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~--l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQ--LNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH--HHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHH--HHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 58999986 999999999999999999999987643221 11100 0000000 00 01122224566778889
Q ss_pred cEEEecCCCC
Q 025065 81 DGVFHTASPV 90 (258)
Q Consensus 81 d~Vih~a~~~ 90 (258)
|+||-+....
T Consensus 80 DvViiaVptp 89 (450)
T 3gg2_A 80 DIIFIAVGTP 89 (450)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEEcCCC
Confidence 9999887653
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.003 Score=51.92 Aligned_cols=64 Identities=13% Similarity=0.027 Sum_probs=48.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+|.|.|. |-||+.+++.|...|++|++.+|++.... ++.. ..++.++++++|+|+-
T Consensus 162 l~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~dr~~~~~~------------g~~~-------~~~l~ell~~aDvVil 221 (333)
T 3ba1_A 162 FSGKRVGIIGL-GRIGLAVAERAEAFDCPISYFSRSKKPNT------------NYTY-------YGSVVELASNSDILVV 221 (333)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEECSSCCTTC------------CSEE-------ESCHHHHHHTCSEEEE
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCchhcc------------Ccee-------cCCHHHHHhcCCEEEE
Confidence 46789999996 99999999999999999999988764321 1111 2346778888999887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 222 ~vP~ 225 (333)
T 3ba1_A 222 ACPL 225 (333)
T ss_dssp CSCC
T ss_pred ecCC
Confidence 6654
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.001 Score=55.09 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=27.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATV 39 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~ 39 (258)
++||.|.||+|++|+.+++.|.+.. .+++++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 5789999999999999999998765 4788775
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.00048 Score=57.20 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=27.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRD 41 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~ 41 (258)
+.||.|.||||++|+.|++.|.+.. .++..+..+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~ 41 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK 41 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence 5789999999999999999887765 477766543
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.00048 Score=57.20 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=27.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRD 41 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~ 41 (258)
+.||.|.||||++|+.|++.|.+.. .++..+..+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~ 41 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK 41 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence 5789999999999999999887765 477766543
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.007 Score=49.56 Aligned_cols=76 Identities=20% Similarity=0.149 Sum_probs=48.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
+++||.|+|+ |.+|..++..|...+. +++.++++...... ..+.........++... | + .+.++++|+
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDv 79 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADL 79 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence 4579999999 9999999999988775 89999885432211 11111110112333332 1 1 334789999
Q ss_pred EEecCCCC
Q 025065 83 VFHTASPV 90 (258)
Q Consensus 83 Vih~a~~~ 90 (258)
||.+++..
T Consensus 80 Vii~ag~~ 87 (326)
T 2zqz_A 80 VVITAGAP 87 (326)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99999874
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0033 Score=53.03 Aligned_cols=71 Identities=17% Similarity=0.085 Sum_probs=50.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V 83 (258)
|+++||||+|+ |.++..+++.+.+.|++|++++...... ..... --+.+..|..|.+.+.++++ ++|.|
T Consensus 5 ~~~~~ilI~g~-g~~~~~~~~a~~~~G~~~v~v~~~~~~~--~~~~~------ad~~~~~~~~d~~~l~~~~~~~~~d~v 75 (403)
T 4dim_A 5 YDNKRLLILGA-GRGQLGLYKAAKELGIHTIAGTMPNAHK--PCLNL------ADEISYMDISNPDEVEQKVKDLNLDGA 75 (403)
T ss_dssp -CCCEEEEECC-CGGGHHHHHHHHHHTCEEEEEECSSCCH--HHHHH------CSEEEECCTTCHHHHHHHTTTSCCSEE
T ss_pred cCCCEEEEECC-cHhHHHHHHHHHHCCCEEEEEcCCCCCC--cchhh------CCeEEEecCCCHHHHHHHHHHcCCCEE
Confidence 45689999998 5579999999999999999986522121 11111 11456788888888888886 47988
Q ss_pred Ee
Q 025065 84 FH 85 (258)
Q Consensus 84 ih 85 (258)
+-
T Consensus 76 ~~ 77 (403)
T 4dim_A 76 AT 77 (403)
T ss_dssp EC
T ss_pred Ee
Confidence 84
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.001 Score=54.59 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=47.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEc--CCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVR--DPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
|+|.|.|+ |.+|+.++..|.+.|++|++++| +++.. +.+..... ...+..+......++++..+.++++|+||-
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~ 77 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEIL--KSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLL 77 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHH--HHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHH--HHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEE
Confidence 47999997 99999999999999999999988 54322 11111000 000111000011222356667788999987
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.-.
T Consensus 78 ~v~~ 81 (335)
T 1txg_A 78 GVST 81 (335)
T ss_dssp CSCG
T ss_pred cCCh
Confidence 6543
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.00045 Score=59.10 Aligned_cols=79 Identities=19% Similarity=0.169 Sum_probs=48.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccc--cCcCCcEE-EE-----EccCCCcccHHHHhCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL--DGATERLH-LF-----KANLLEEGSFDSAVDGC 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~-~~-----~~Dl~~~~~~~~~~~~~ 80 (258)
|||.|+| +|++|..++..|.+.|++|++++|++..... +..- ....++.. .+ .+.+.-..++.++++++
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~--l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~a 77 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDL--INQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDS 77 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHH--HHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--HhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccC
Confidence 4799998 5999999999999999999999987543211 1110 00000000 00 01122233466677889
Q ss_pred cEEEecCCCC
Q 025065 81 DGVFHTASPV 90 (258)
Q Consensus 81 d~Vih~a~~~ 90 (258)
|+||-+....
T Consensus 78 DvviiaVptp 87 (436)
T 1mv8_A 78 DVSFICVGTP 87 (436)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEEcCCC
Confidence 9999887653
|
| >1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0072 Score=48.98 Aligned_cols=63 Identities=19% Similarity=0.201 Sum_probs=48.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|. |-||+.+++.|...|++|++.+|+.. . . ......++.++++++|+|+-
T Consensus 122 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~dr~~~-~-~------------------~~~~~~~l~ell~~aDvV~l 180 (303)
T 1qp8_A 122 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK-E-G------------------PWRFTNSLEEALREARAAVC 180 (303)
T ss_dssp CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC-C-S------------------SSCCBSCSHHHHTTCSEEEE
T ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcc-c-c------------------CcccCCCHHHHHhhCCEEEE
Confidence 46789999985 99999999999999999999988664 1 0 01123456778889999887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 181 ~~P~ 184 (303)
T 1qp8_A 181 ALPL 184 (303)
T ss_dssp CCCC
T ss_pred eCcC
Confidence 6654
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0026 Score=51.85 Aligned_cols=36 Identities=22% Similarity=0.408 Sum_probs=31.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~ 43 (258)
..++|.|+| .|.+|+.+++.|.+.|+ +|++.+|++.
T Consensus 32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 347999999 59999999999999999 9999988764
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0015 Score=54.09 Aligned_cols=75 Identities=21% Similarity=0.219 Sum_probs=48.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc--ccHHHHh-CCCcEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE--GSFDSAV-DGCDGV 83 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~-~~~d~V 83 (258)
.+.+|||+||+|-+|...++.+...|.+|+++++++.+. +...++ +.+. ..|..+. +.+.+.- .++|+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~--~~~~~l-----Ga~~-vi~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI--EWTKKM-----GADI-VLNHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH--HHHHHH-----TCSE-EECTTSCHHHHHHHHTCCCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHhc-----CCcE-EEECCccHHHHHHHhCCCCccEE
Confidence 467999999999999999999999999999998765332 222222 1111 1233321 1222221 258999
Q ss_pred EecCCC
Q 025065 84 FHTASP 89 (258)
Q Consensus 84 ih~a~~ 89 (258)
+++++.
T Consensus 222 ~d~~g~ 227 (346)
T 3fbg_A 222 FCTFNT 227 (346)
T ss_dssp EESSCH
T ss_pred EECCCc
Confidence 999875
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0044 Score=49.38 Aligned_cols=58 Identities=22% Similarity=0.116 Sum_probs=47.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++++|.|+++-+|+.+++.|+..|..|++..++. .++.+.++++|+||.
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI~ 208 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT----------------------------KNLRHHVENADLLIV 208 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC----------------------------SCHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc----------------------------hhHHHHhccCCEEEE
Confidence 4689999999999999999999999999999875432 246777788999998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
.++...
T Consensus 209 Avg~p~ 214 (288)
T 1b0a_A 209 AVGKPG 214 (288)
T ss_dssp CSCCTT
T ss_pred CCCCcC
Confidence 888644
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0038 Score=51.66 Aligned_cols=74 Identities=19% Similarity=0.079 Sum_probs=48.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC-cc---cHHHHh-----
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EG---SFDSAV----- 77 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~---~~~~~~----- 77 (258)
.+.+|||+|+ |-+|...++.+...|.+|+++++++.+. +...++ +.+ ...|..+ .+ .+.+..
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~--~~~~~l-----Ga~-~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL--EVAKNC-----GAD-VTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH--HHHHHT-----TCS-EEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH--HHHHHh-----CCC-EEEcCcccccHHHHHHHHhccccC
Confidence 4679999997 9999999999988999999888765332 112221 121 1234443 33 333333
Q ss_pred CCCcEEEecCCC
Q 025065 78 DGCDGVFHTASP 89 (258)
Q Consensus 78 ~~~d~Vih~a~~ 89 (258)
.++|+||++++.
T Consensus 239 ~g~D~vid~~g~ 250 (352)
T 1e3j_A 239 DLPNVTIDCSGN 250 (352)
T ss_dssp SCCSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 369999999885
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0061 Score=53.86 Aligned_cols=69 Identities=12% Similarity=0.141 Sum_probs=57.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a 87 (258)
++++|.|+ |-+|+++++.|.+.|++|+++++++..... . ...+.+|.++++.++++ ++++|.||-+.
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~-----~------~~~i~gD~t~~~~L~~agi~~ad~vi~~~ 416 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCN-----D------HVVVYGDATVGQTLRQAGIDRASGIIVTT 416 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCC-----S------SCEEESCSSSSTHHHHHTTTSCSEEEECC
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhh-----c------CCEEEeCCCCHHHHHhcCccccCEEEEEC
Confidence 68999998 999999999999999999999988765432 1 16899999999988875 46799998655
Q ss_pred CC
Q 025065 88 SP 89 (258)
Q Consensus 88 ~~ 89 (258)
+.
T Consensus 417 ~~ 418 (565)
T 4gx0_A 417 ND 418 (565)
T ss_dssp SC
T ss_pred CC
Confidence 54
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0014 Score=51.76 Aligned_cols=67 Identities=21% Similarity=0.113 Sum_probs=45.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+|+|.|+| .|.+|+.+++.|.+.|++|.+.+|+++... .+.... + +.-..++.++++++|+||-+.
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~--~~~~~~----g-------~~~~~~~~~~~~~~D~Vi~~v 68 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSK--EIAEQL----A-------LPYAMSHQDLIDQVDLVILGI 68 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHH--HHHHHH----T-------CCBCSSHHHHHHTCSEEEECS
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHH--HHHHHc----C-------CEeeCCHHHHHhcCCEEEEEe
Confidence 46899999 599999999999999999998888653321 111100 1 111234566677889888776
Q ss_pred C
Q 025065 88 S 88 (258)
Q Consensus 88 ~ 88 (258)
.
T Consensus 69 ~ 69 (259)
T 2ahr_A 69 K 69 (259)
T ss_dssp C
T ss_pred C
Confidence 4
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 258 | ||||
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-17 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-16 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 1e-15 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 4e-12 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 5e-15 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 3e-14 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 9e-14 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 2e-12 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 2e-11 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 2e-11 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 2e-10 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 2e-10 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 5e-10 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 4e-04 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 5e-10 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 6e-10 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 9e-10 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 1e-09 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-09 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-09 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 6e-09 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 6e-09 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 5e-08 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 1e-07 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 1e-06 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 2e-06 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 2e-04 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 5e-06 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 5e-06 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 8e-06 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 1e-05 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 4e-05 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 4e-05 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 2e-04 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 3e-04 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 3e-04 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 6e-04 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 6e-04 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 8e-04 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 8e-04 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 9e-04 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 0.001 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 0.001 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 0.001 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 0.001 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 0.002 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.002 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 0.002 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 0.002 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 0.002 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 0.003 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 0.003 | |
| d1mlda1 | 144 | c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s | 0.004 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.8 bits (191), Expect = 2e-17
Identities = 38/243 (15%), Positives = 74/243 (30%), Gaps = 74/243 (30%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + +TG +GFV S L L+ G+ V V + + + ++ G E L +++
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDGHEVTV-VDNFFTGRKRNVEHWIGH-ENFELINHDVV 59
Query: 69 EEGSFDSAVDGCDGVFHTASP----------------------------------VIFLS 94
+ D ++H ASP ++ S
Sbjct: 60 -----EPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAS 114
Query: 95 -----------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTV 131
P+ Y K +AE + + K+ G+++
Sbjct: 115 TSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNT 174
Query: 132 IGPFFQP-----ILNFGAEVILN---LINGDQSFAFPYIFVEIRDVVYAHIRALEVPKAS 183
GP + NF + + + G S + +V D+V + + +S
Sbjct: 175 FGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS--DLVNGLVALMNSNVSS 232
Query: 184 GRY 186
Sbjct: 233 PVN 235
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 76.0 bits (186), Expect = 1e-16
Identities = 41/244 (16%), Positives = 74/244 (30%), Gaps = 68/244 (27%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKA----TVRD--PNSPKTEHLRELDGATERLHLFK 64
+ VTG +GF+ S V+ LL Y V D + +L +D A RL
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVH 61
Query: 65 ANLLEEGSFDSAVDGCDGVFHTASP----------------------------------- 89
++ + G + G D + H A+
Sbjct: 62 GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121
Query: 90 VIFLSD------------------NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTV 131
V+ +S P Y+ +K ++ A + + G+D+
Sbjct: 122 VVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNN 181
Query: 132 IGPFFQP---ILNFGAEVILN---LINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR 185
GP+ P I F ++ + GD + ++ + D L +A
Sbjct: 182 YGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD--DHCRGIALVLAGGRAGEI 239
Query: 186 YLLA 189
Y +
Sbjct: 240 YHIG 243
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 73.3 bits (178), Expect = 1e-15
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP-KTEHLRELDGATERLHLFKANL 67
+V VTGA+GFVAS +V+ LL+ GY V+ T R + + + ++
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71
Query: 68 LEEGSFDSAVDGCDGVFH 85
L++G++D + G GV H
Sbjct: 72 LKQGAYDEVIKGAAGVAH 89
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 62.9 bits (151), Expect = 4e-12
Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 14/169 (8%)
Query: 96 NPQEWYSLAKTLAEEAAWKFAKENGIDLV--AIHPGTVIGPFFQPILNFGA--EVILNLI 151
Y+ +KT AE AAWKF EN A+ P IG F P G+ +++L
Sbjct: 171 KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLF 230
Query: 152 NGDQSFAFP----YIFVEIRDVVYAHIRALEVPKASGRYLLA-GSVAQHSDILKFLREHY 206
NG+ S A +V D+ H+ L +P+ R + + +L R+ Y
Sbjct: 231 NGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLY 290
Query: 207 PTLLRSGKLEEK----YQPTIKVSQERAKSLGI-NFTPWEVGVRGCIES 250
P+ ++ + S E KSLG + E ++ + S
Sbjct: 291 PSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 71.6 bits (174), Expect = 5e-15
Identities = 29/235 (12%), Positives = 63/235 (26%), Gaps = 41/235 (17%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
++K + V GA+G + L+++ G+ V+A V E L+ + T LF+
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT----LFQGP 57
Query: 67 LLE-EGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLA----------------- 108
LL D+ +G F + + + A A
Sbjct: 58 LLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117
Query: 109 -----------EEAAWKFAKENGIDLVAIHPGTVIGPF--------FQPILNFGAEVILN 149
+ + ++ G+ ++ G F ++ G
Sbjct: 118 GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA 177
Query: 150 LINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDILKFLRE 204
+ D + ++ + + R L +
Sbjct: 178 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSR 232
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 69.1 bits (168), Expect = 3e-14
Identities = 43/309 (13%), Positives = 80/309 (25%), Gaps = 77/309 (24%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL----DGATERLHLFK 64
KV +TG +G S+L + LL++GY V R +S TE + + + HL
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61
Query: 65 ANL-----LEEGSFDSAVDGCDGVFHTASP------------------------------ 89
+L L + D + +
Sbjct: 62 GDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGL 121
Query: 90 -----VIFLS------------------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126
S P+ Y++AK A + + G+
Sbjct: 122 EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNG 181
Query: 127 HPGTVIGP----------FFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176
P + I N + L G+ + +D V
Sbjct: 182 ILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHA--KDYVKMQWMM 239
Query: 177 LEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKVSQERAKSLGIN 236
L+ + + + Q+S + +F+ L + E +
Sbjct: 240 LQQEQPEDFVI--ATGVQYS-VRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPG 296
Query: 237 FTPWEVGVR 245
P +V +
Sbjct: 297 VKPGDVIIA 305
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.2 bits (160), Expect = 9e-14
Identities = 32/212 (15%), Positives = 56/212 (26%), Gaps = 53/212 (25%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + + GA+G + +Q GY V VRD + +E H+ ++L
Sbjct: 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-------PRPAHVVVGDVL 56
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTL--------------------- 107
+ D V G D V LS +
Sbjct: 57 QAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116
Query: 108 --------------AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLING 153
K +E+G+ VA+ P + ++G
Sbjct: 117 DPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGD-------QPLTGAYTVTLDG 169
Query: 154 DQSFAFPYIFVEIRDVVYAHIRALEVPKASGR 185
+ D+ + +R L + G
Sbjct: 170 RGPSR----VISKHDLGHFMLRCLTTDEYDGH 197
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 63.3 bits (152), Expect = 2e-12
Identities = 30/212 (14%), Positives = 63/212 (29%), Gaps = 34/212 (16%)
Query: 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP----NSPKTEHLRELDGATERLH 61
G + + GA+G++ + K L G+ VR+ NS K + L +
Sbjct: 1 GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGAN 58
Query: 62 LFKANLLEEGSFDSAVDGCDGV---------------------------FHTASPVIFLS 94
+ ++ + S AV D V F + +
Sbjct: 59 IVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVD 118
Query: 95 DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD 154
+ + + + + + GI + G F + + G
Sbjct: 119 NVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVI 178
Query: 155 -QSFAFPYIFVEIRDVVYAHIRALEVPKASGR 185
+FV+ D+ I+A++ P+ +
Sbjct: 179 LGDGNARVVFVKEEDIGTFTIKAVDDPRTLNK 210
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 60.4 bits (145), Expect = 2e-11
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+ VTG +G ++L KLLL++GY V V +S LREL G + ++
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMA 59
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWY 101
+ S AV
Sbjct: 60 DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQP 92
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 60.6 bits (145), Expect = 2e-11
Identities = 23/218 (10%), Positives = 59/218 (27%), Gaps = 37/218 (16%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE-RLHLFKANLLE 69
V + G +G++ +V + G+ R + ++ L + L +A+L +
Sbjct: 6 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 65
Query: 70 EGSFDSAVDGCDGVFHTASP------------------------VIFLSDNPQEWYSLA- 104
A+ D V + S+ + +
Sbjct: 66 HQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEH 125
Query: 105 -------KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSF 157
+ + + + I + G F + ++
Sbjct: 126 ALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYG 185
Query: 158 AFPYI--FVEIRDVVYAHIRALEVPKASGR--YLLAGS 191
+V+ DV I++++ P+ + Y+
Sbjct: 186 DGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPM 223
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 58.0 bits (139), Expect = 2e-10
Identities = 24/166 (14%), Positives = 45/166 (27%), Gaps = 40/166 (24%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN-----SPKTEHLRELDGATERLHLF 63
+ V + G G V S + + L QRG S + +
Sbjct: 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAA 62
Query: 64 KA-------NLLEEGSFDSAVDGCDGVFHTA-----SPVIFLS----------------- 94
N + + H A + ++FL
Sbjct: 63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESE 122
Query: 95 ------DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134
+ E Y++AK + + ++ G D ++ P + GP
Sbjct: 123 LLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGP 168
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 57.4 bits (137), Expect = 2e-10
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ +TG GF+ S L L +G + T++L L ++ +
Sbjct: 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNK 61
Query: 71 GSFDSAVDGC--DGVFHTA--SPVIFLSDNPQEWY 101
+ D FH A + DNP +
Sbjct: 62 NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDF 96
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.5 bits (135), Expect = 5e-10
Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 10/132 (7%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-----DGATERLHLF 63
V +TG +G S+L + LL++GY V VR +S T + L + L
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61
Query: 64 KANLLEEGSFDSAVDGCDGVFH---TASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENG 120
+L + ++ A + +S + E+ + + K G
Sbjct: 62 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG 121
Query: 121 IDLVA--IHPGT 130
+ T
Sbjct: 122 LINSVKFYQAST 133
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (89), Expect = 4e-04
Identities = 8/39 (20%), Positives = 11/39 (28%)
Query: 96 NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGP 134
P+ Y AK A F + + V P
Sbjct: 152 YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESP 190
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 56.6 bits (135), Expect = 5e-10
Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 9/102 (8%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATE-----RLHLF 63
K+ +TG +G S+L + LL +GY V +R ++ T+ + + + L
Sbjct: 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61
Query: 64 KANLLEEGSFDSAVD--GCDGVFHTASPVIFL--SDNPQEWY 101
A+L + S +D D V++ A+ + P
Sbjct: 62 YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTA 103
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 56.5 bits (135), Expect = 6e-10
Identities = 27/132 (20%), Positives = 41/132 (31%), Gaps = 4/132 (3%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V VTG SG++ S LLQ G+ V NS ++ + + ++ E
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62
Query: 71 GSFDSAVD--GCDGVFHTA--SPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126
+ D V H A V P E+Y N + +
Sbjct: 63 ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFS 122
Query: 127 HPGTVIGPFFQP 138
TV G +
Sbjct: 123 SSATVYGDQPKI 134
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 55.8 bits (133), Expect = 9e-10
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K + VTG +GF+ S V + V TV D + +R+ L ++
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIA 62
Query: 69 EEGSFDSAVDGCDGVFHTA--SPVIFLSDNPQEWY 101
+ D D + H A S ++P +
Sbjct: 63 DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFI 97
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.8 bits (133), Expect = 1e-09
Identities = 22/123 (17%), Positives = 39/123 (31%), Gaps = 3/123 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K+V VTG +G++ S V L++ GY NS R + ++ +L
Sbjct: 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61
Query: 69 EEGSFDSAVD--GCDGVFHTASPV-IFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVA 125
+ + D V H A + S Y L + ++ +
Sbjct: 62 DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 121
Query: 126 IHP 128
Sbjct: 122 FSS 124
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 55.1 bits (132), Expect = 2e-09
Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN-SPKTEHLRELDGATERLHLFKANLLE 69
+ +TG +GF+ S +V+ +++ + + E L ++ + R + A++ +
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISES-NRYNFEHADICD 61
Query: 70 EGSFDSAVDG--CDGVFHTA--SPVIFLSDNPQEWY 101
+ D V H A S V P +
Sbjct: 62 SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFI 97
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 54.8 bits (131), Expect = 2e-09
Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 8/102 (7%)
Query: 95 DNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQP--ILNFGAEVILN--- 149
P YS +K ++ + + G+ + + GP+ P ++ L
Sbjct: 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKP 220
Query: 150 -LINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAG 190
I G +++VE D A + KA Y + G
Sbjct: 221 LPIYGKGDQIRDWLYVE--DHARALHMVVTEGKAGETYNIGG 260
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 52.5 bits (124), Expect = 6e-09
Identities = 27/204 (13%), Positives = 52/204 (25%), Gaps = 31/204 (15%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V + GA+G L+ +L K + + L + +
Sbjct: 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS 62
Query: 69 EEGSFDSA---------------VDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAW 113
+ +F VD + + + + +L +
Sbjct: 63 IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFY 122
Query: 114 KFAKENGIDLVAIH---------PGTVIGPFFQPILNFG-AEVILNLINGDQSFAFPYIF 163
K + P + GP + L A I ++ G Y
Sbjct: 123 NRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGK------YHG 176
Query: 164 VEIRDVVYAHIRALEVPKASGRYL 187
+E D+ A R R++
Sbjct: 177 IEACDLARALWRLALEEGKGVRFV 200
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 53.3 bits (126), Expect = 6e-09
Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 2/77 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V VTG +GF WL L G TVK +P L E + + ++
Sbjct: 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLT--APTVPSLFETARVADGMQSEIGDIR 66
Query: 69 EEGSFDSAVDGCDGVFH 85
++ ++
Sbjct: 67 DQNKLLESIREFQPEIV 83
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 50.2 bits (118), Expect = 5e-08
Identities = 34/239 (14%), Positives = 59/239 (24%), Gaps = 55/239 (23%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
V VTGASG + K L + A ++ E + +F ++
Sbjct: 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG------GEADVFIGDIT 57
Query: 69 EEGSFDSAVDGCDGVFHTASPV---------------IFLSDNPQEWYSLAKTLAEEAAW 113
+ S + A G D + S V F+ ++ Q + +
Sbjct: 58 DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 117
Query: 114 KFAKENGIDLVAIHPGTVIGPFFQPIL--------------------------------- 140
+V + P
Sbjct: 118 AAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLL 177
Query: 141 -NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLLAGSVAQHSDI 198
G L + D+ V DV I+AL +A + GS + +
Sbjct: 178 DKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTST 236
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (115), Expect = 1e-07
Identities = 30/211 (14%), Positives = 50/211 (23%), Gaps = 31/211 (14%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
K V + GASG L+K +L++G K T+ + + E + K +
Sbjct: 15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDY 74
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAE------------------- 109
V C Y L
Sbjct: 75 ASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134
Query: 110 ----------EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAF 159
E K + PG ++ + G ++
Sbjct: 135 SNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDSWA 192
Query: 160 PYIFVEIRDVVYAHIRALEVPKASGRYLLAG 190
V + VV A + + P+ LL
Sbjct: 193 SGHSVPVVTVVRAMLNNVVRPRDKQMELLEN 223
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 46.9 bits (109), Expect = 1e-06
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 6/92 (6%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V + G +GF+ + L + LL+ + + D S H + ++
Sbjct: 3 VLILGVNGFIGNHLTERLLREDH-YEVYGLDIGSDAISRFLNHP----HFHFVEGDISIH 57
Query: 71 GSF-DSAVDGCDGVFHTASPVIFLSDNPQEWY 101
+ + V CD V + +
Sbjct: 58 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLR 89
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 46.1 bits (108), Expect = 2e-06
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
+ +TGA GF+AS + + L G+ V A+ N TE + +L
Sbjct: 18 ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF-------CDEFHLVDLRVM 70
Query: 71 GSFDSAVDGCDGVFHTASPVIFLSDNPQEWY 101
+ +G D VF+ A+ + +
Sbjct: 71 ENCLKVTEGVDHVFNLAADMGGMGFIQSNHS 101
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 39.9 bits (92), Expect = 2e-04
Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 9/119 (7%)
Query: 96 NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQ 155
PQ+ + L K EE + K+ GI+ + GPF
Sbjct: 157 EPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQT 216
Query: 156 SFAFPYIFVE---IRDVVY------AHIRALEVPKASGRYLLAGSVAQHSDILKFLREH 205
S ++ + R + +R + + + + +++ + +
Sbjct: 217 STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSF 275
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.6 bits (104), Expect = 5e-06
Identities = 18/131 (13%), Positives = 36/131 (27%), Gaps = 6/131 (4%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVR--DPNSPKTEHLRELDGATE----RLHL 62
KV +TG +GF+ S L++ LL+ V + + +R L + +
Sbjct: 17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ 76
Query: 63 FKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGID 122
L++ + A V ++P +
Sbjct: 77 GDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQS 136
Query: 123 LVAIHPGTVIG 133
+ G
Sbjct: 137 FTYAASSSTYG 147
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 44.6 bits (103), Expect = 5e-06
Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 5/70 (7%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGATERLHLF 63
V V G G+ L ++ Y V + E L + +R+ +
Sbjct: 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 61
Query: 64 KANLLEEGSF 73
KA +
Sbjct: 62 KALTGKSIEL 71
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.9 bits (102), Expect = 8e-06
Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 10/103 (9%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKA-----TVRDPNSPKTEHLRELDGAT-ERLHL 62
+ V VTG +G++ S V LL+ GY E LR + T +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 63 FKANLLEEGSFDSAVDGCDGVFHT---ASPVIFLS-DNPQEWY 101
+ ++L++G+ + + S P ++Y
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYY 105
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 43.1 bits (99), Expect = 1e-05
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRD-PNSPKTEHLRELD 54
+ VTG +GF+ S +VK L +G T V + + K +L +L+
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN 46
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 41.7 bits (96), Expect = 4e-05
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRD 41
+ +TGA+G + + K L + V T
Sbjct: 4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 41.9 bits (96), Expect = 4e-05
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43
+ + G +G V L + L G + V
Sbjct: 3 ILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE 35
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 39.2 bits (91), Expect = 2e-04
Identities = 13/72 (18%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKAN 66
K V +TG+S + + + G V T R+ + + + + + E+++ A+
Sbjct: 5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD 64
Query: 67 LLEEGSFDSAVD 78
+ E D ++
Sbjct: 65 VTEASGQDDIIN 76
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 38.9 bits (90), Expect = 3e-04
Identities = 14/70 (20%), Positives = 22/70 (31%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
KV VTGA + + L +RG V + E + + KAN+
Sbjct: 19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 78
Query: 69 EEGSFDSAVD 78
+
Sbjct: 79 VVEDIVRMFE 88
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 38.6 bits (89), Expect = 3e-04
Identities = 16/107 (14%), Positives = 28/107 (26%), Gaps = 1/107 (0%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
VTG S + +V+ L G V R+ E L + +LL
Sbjct: 7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD-ECLEIWREKGLNVEGSVCDLL 65
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKF 115
D + VF ++ + ++
Sbjct: 66 SRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIM 112
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 37.8 bits (87), Expect = 6e-04
Identities = 14/70 (20%), Positives = 26/70 (37%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
KV TGA + + L +RG +V + E + EL + +A++
Sbjct: 7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADIS 66
Query: 69 EEGSFDSAVD 78
+ + D
Sbjct: 67 KPSEVVALFD 76
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 37.8 bits (87), Expect = 6e-04
Identities = 13/72 (18%), Positives = 27/72 (37%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
VV VTGAS + + L + G V E ++++ + F ++
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61
Query: 69 EEGSFDSAVDGC 80
+E ++ +
Sbjct: 62 KEADVEAMMKTA 73
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 37.7 bits (87), Expect = 8e-04
Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
VTG S + +V+ L G +V R+ + L + ++ +L
Sbjct: 9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN-DCLTQWRSKGFKVEASVCDLS 67
Query: 69 EEGSFDSAVDGCDGVFH 85
++ FH
Sbjct: 68 SRSERQELMNTVANHFH 84
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 37.4 bits (86), Expect = 8e-04
Identities = 18/110 (16%), Positives = 31/110 (28%), Gaps = 10/110 (9%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
M + E KVV +TG+S + + V R L E+
Sbjct: 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 62 LFKANLLEEGSFDSA----------VDGCDGVFHTASPVIFLSDNPQEWY 101
K ++ E + +D +PV + +W
Sbjct: 61 AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWN 110
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (86), Expect = 9e-04
Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 9/122 (7%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
KVV VTG + + +V+ + G V +D R L+ ++
Sbjct: 7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE-----SGGRALEQELPGAVFILCDVT 61
Query: 69 EEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHP 128
+E + V F + N + + E +A F + ++L+ +
Sbjct: 62 QEDDVKTLVSETIRRFGR----LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYT 117
Query: 129 GT 130
T
Sbjct: 118 LT 119
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 37.3 bits (86), Expect = 0.001
Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 6/115 (5%)
Query: 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERL 60
GE KV VTGA + + K+L + V R S + E+
Sbjct: 5 YYCGEN--KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD-SVVDEIKSFGYES 61
Query: 61 HLFKANLLEEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKF 115
+ ++ ++ + + + V L +N + W+
Sbjct: 62 SGYAGDVSKKEEISEVI---NKILTEHKNVDILVNNAGITRDNLFLRMKNDEWED 113
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 37.3 bits (86), Expect = 0.001
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKAN 66
K V +TG+S + L Q G V T R + + + + + ++++ A+
Sbjct: 6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD 65
Query: 67 LLEEGSFDSAVD 78
+ E D ++
Sbjct: 66 VTTEDGQDQIIN 77
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 37.1 bits (85), Expect = 0.001
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
MS V VTGA+ + LV+ L++ + K L+ + + R+H
Sbjct: 1 MSP----GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS--RVH 54
Query: 62 LFKANLLEEGSFDSAVDGCDGVF 84
+ + + S D+ V +
Sbjct: 55 VLPLTVTCDKSLDTFVSKVGEIV 77
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 37.2 bits (86), Expect = 0.001
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFK 64
EKV +TG+S + L + G V T R + + + + + ++
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63
Query: 65 ANLLEEGSFDSAVD 78
A++ + D +
Sbjct: 64 ADVTTDAGQDEILS 77
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 36.5 bits (84), Expect = 0.002
Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 8/87 (9%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
VTGA + VK L G V A R L L + +L
Sbjct: 6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN-----SDLVSLAKECPGIEPVCVDLG 60
Query: 69 EEGSFDSAVD---GCDGVFHTASPVIF 92
+ + + A+ D + + A+ VI
Sbjct: 61 DWDATEKALGGIGPVDLLVNNAALVIM 87
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 36.7 bits (83), Expect = 0.002
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 11 VCVTGASGFVASWLVKLLLQR-GYTV 35
V V G +G++ S V+ LL+ ++V
Sbjct: 5 VLVCGGAGYIGSHFVRALLRDTNHSV 30
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 36.4 bits (84), Expect = 0.002
Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 10/88 (11%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
++K+ +TG + + + + G + P +R L R+ K +
Sbjct: 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGR---RVLTVKCD 60
Query: 67 LLEEGSFDSAVD-------GCDGVFHTA 87
+ + G ++ CD + + A
Sbjct: 61 VSQPGDVEAFGKQVISTFGRCDILVNNA 88
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 36.2 bits (83), Expect = 0.002
Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKAN 66
++KV +TG +G + KL ++ G V D + + G+ + + +
Sbjct: 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIA--DIADDHGQKVCNNIGSPDVISFVHCD 62
Query: 67 LLEEGSFDSAVDGC 80
+ ++ + VD
Sbjct: 63 VTKDEDVRNLVDTT 76
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 36.1 bits (83), Expect = 0.002
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
KV +TG + + + ++ G V T R +S E + G +++ F+ +
Sbjct: 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGR--HSDVGEKAAKSVGTPDQIQFFQHDSS 64
Query: 69 EEGSFDSAVDGCDGVF 84
+E + D + F
Sbjct: 65 DEDGWTKLFDATEKAF 80
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 35.8 bits (82), Expect = 0.003
Identities = 12/140 (8%), Positives = 35/140 (25%), Gaps = 11/140 (7%)
Query: 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLH 61
+S K + VTG + + + + G V R + +
Sbjct: 5 ISFVN--KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTK 62
Query: 62 LFKANLLEEGSFDSAVD-------GCDGVFHTASPVIF--LSDNPQEWYSLAKTLAEEAA 112
++ ++ + G+ A + ++ E ++ +
Sbjct: 63 AYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGV 122
Query: 113 WKFAKENGIDLVAIHPGTVI 132
+ + + I
Sbjct: 123 FNTCRAVAKLWLQKQQKGSI 142
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.7 bits (82), Expect = 0.003
Identities = 19/99 (19%), Positives = 32/99 (32%), Gaps = 11/99 (11%)
Query: 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL 68
+ V VTGA + V+ L G V A R L L + +L
Sbjct: 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ-----ADLDSLVRECPGIEPVCVDLG 62
Query: 69 EEGSFDSAVD---GCDGVFH---TASPVIFLSDNPQEWY 101
+ + + A+ D + + A FL + +
Sbjct: 63 DWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFD 101
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 34.6 bits (79), Expect = 0.004
Identities = 24/132 (18%), Positives = 36/132 (27%), Gaps = 5/132 (3%)
Query: 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE 70
V V GASG + L LL + T+ D T L
Sbjct: 3 VAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET---RATVKGYLGP 59
Query: 71 GSFDSAVDGCDGVFHTAS-PVIFLSDNPQEWYSLAKTLAEEAAW-KFAKENGIDLVAIHP 128
+ GCD V A P + + A +A A + + + +P
Sbjct: 60 EQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP 119
Query: 129 GTVIGPFFQPIL 140
P +
Sbjct: 120 VNSTIPITAEVF 131
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 258 | |||
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.98 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.95 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.95 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.94 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.94 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.93 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.93 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.87 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.87 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.81 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.79 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.79 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.79 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.78 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.77 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.77 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.77 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.77 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.76 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.76 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.76 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.76 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.76 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.76 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.76 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.75 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.75 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.75 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.75 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.74 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.73 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.73 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.73 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.73 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.73 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.73 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.73 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.73 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.72 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.72 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.72 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.71 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.71 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.71 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.71 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.7 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.69 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.69 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.69 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.69 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.68 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.66 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.66 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.65 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.63 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.63 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.63 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.61 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.61 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.59 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.58 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.56 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.56 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.55 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.55 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.55 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.55 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.55 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.53 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.52 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.51 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.48 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.48 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.48 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.41 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.14 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.7 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.48 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.33 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.16 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 98.14 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 98.13 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.02 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.01 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 98.01 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.0 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.0 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.97 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.96 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.93 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.82 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.81 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.75 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.74 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.74 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.72 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.72 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.72 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.71 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.7 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.67 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.66 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.66 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.65 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.63 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.61 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.6 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.52 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 97.52 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.51 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.51 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.51 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.49 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.48 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.46 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.45 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.45 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.43 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.39 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 97.39 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.37 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 97.37 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.34 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.34 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.29 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.29 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.26 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.25 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.23 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 97.23 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 97.18 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 97.15 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.15 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.14 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.14 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 97.1 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.06 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.06 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.05 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 97.03 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.02 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.01 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.01 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 97.0 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.99 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 96.91 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.91 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.91 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.9 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 96.89 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.88 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.86 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.86 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 96.84 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 96.83 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.8 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.8 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 96.77 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 96.75 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.75 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.67 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.65 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 96.55 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.55 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.55 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.54 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 96.54 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 96.54 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 96.54 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 96.53 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 96.52 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.47 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.45 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.44 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.42 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.4 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.39 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.36 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 96.32 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 96.29 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 96.27 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 96.27 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.26 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 96.25 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 96.24 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 96.22 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.15 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 96.15 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.14 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.13 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 96.12 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.11 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 96.08 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 96.07 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 96.03 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.98 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.96 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 95.84 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 95.82 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 95.75 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 95.74 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 95.72 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.72 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.67 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 95.66 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.62 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.62 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 95.53 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 95.51 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.49 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.45 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 95.39 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 95.37 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.31 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 95.28 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 95.21 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.2 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 95.18 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 95.12 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.12 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.11 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 95.09 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 95.07 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.0 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 94.96 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 94.92 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.91 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 94.9 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 94.87 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 94.84 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 94.69 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 94.65 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 94.61 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 94.59 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 94.56 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 94.47 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 94.46 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 94.45 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 94.39 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 94.34 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 94.13 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.07 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 94.03 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.99 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 93.98 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 93.71 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 93.71 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 93.7 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 93.58 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 93.37 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 93.24 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 93.11 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 93.03 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 92.87 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 92.7 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 92.34 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 92.24 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 92.14 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 91.99 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 91.91 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 91.39 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 91.02 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 90.97 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 90.78 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 90.72 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 90.7 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 90.52 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 90.38 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 90.26 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 90.22 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 89.9 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 89.62 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 89.45 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 89.1 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 88.83 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 88.82 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 88.73 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 88.17 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 88.0 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 87.59 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 87.29 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 87.13 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 87.13 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 87.1 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 86.81 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 86.76 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 86.75 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 86.69 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 86.65 | |
| d1m6ia1 | 213 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 86.49 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 86.42 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 86.24 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 85.95 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 85.79 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.66 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 85.55 | |
| d1fl2a2 | 126 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 85.47 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 85.31 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 85.25 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 84.19 | |
| d1eucb1 | 148 | Succinyl-CoA synthetase, beta-chain, C-terminal do | 83.91 | |
| d1p3y1_ | 183 | MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]} | 83.7 | |
| d1ps9a2 | 162 | 2,4-dienoyl-CoA reductase, C-terminal domain {Esch | 83.37 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 83.15 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 82.93 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 82.7 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 82.61 | |
| d1sbza_ | 186 | Probable aromatic acid decarboxylase Pad1 {Escheri | 82.46 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 81.82 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 81.74 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 81.49 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 81.35 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 80.83 | |
| d1q7ea_ | 417 | Hypothetical protein YfdW {Escherichia coli [TaxId | 80.75 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 80.69 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 80.45 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 80.26 | |
| d1vdca2 | 130 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 80.2 |
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=7.6e-42 Score=286.34 Aligned_cols=244 Identities=16% Similarity=0.254 Sum_probs=189.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEE-EEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEe
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVK-ATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 85 (258)
|||||||||||||++|+++|+++|++|+ ++++.........+..+. ..++++++++|++|++.+.++++ ++|+|||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih 79 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 4899999999999999999999999754 455443332222232222 14689999999999999999886 5899999
Q ss_pred cCCCCCC--CCCCch-----------------------------------------------------------------
Q 025065 86 TASPVIF--LSDNPQ----------------------------------------------------------------- 98 (258)
Q Consensus 86 ~a~~~~~--~~~~~~----------------------------------------------------------------- 98 (258)
|||..+. +..++.
T Consensus 80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~ 159 (361)
T d1kewa_ 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence 9997532 111111
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHH
Q 025065 99 -----EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRD 168 (258)
Q Consensus 99 -----~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D 168 (258)
+.|+.+|+++|.++..+.++++++++++||++||||++... ...+.++.++..|+ .+++ +.|+|+|++|
T Consensus 160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D 238 (361)
T d1kewa_ 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHH
Confidence 55999999999999999999999999999999999987643 34567788888887 3344 7899999999
Q ss_pred HHHHHHHhhcCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCC---CCCC--CC-----ccCCCCccccCHHHH-HhcCCC
Q 025065 169 VVYAHIRALEVPKASGRY-LLAGSVAQHSDILKFLREHYPTL---LRSG--KL-----EEKYQPTIKVSQERA-KSLGIN 236 (258)
Q Consensus 169 ~a~~~~~~~~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~---~~~~--~~-----~~~~~~~~~~d~~k~-~~lg~~ 236 (258)
+|+++..++++...++.| +++++..++.|+++.+.+.++.. .... .. .+.....+.+|++|+ +.|||+
T Consensus 239 ~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~ 318 (361)
T d1kewa_ 239 HARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWK 318 (361)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCC
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCCC
Confidence 999999999988777788 55688999999999998876321 1000 00 033456678999999 779999
Q ss_pred c-cchhHHHHHHHHHHHHc
Q 025065 237 F-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 237 p-~~~~~~l~~~~~~~~~~ 254 (258)
| ++++++|+++++||+++
T Consensus 319 P~~~l~e~i~~ti~w~~~n 337 (361)
T d1kewa_ 319 PLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp CSCCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 9 99999999999999875
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=3.7e-41 Score=280.70 Aligned_cols=244 Identities=16% Similarity=0.211 Sum_probs=191.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC--ccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS--PKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
||||||||||||||++|+++|+++|++|++++++... .....+... ...+++++.+|++|.+.+..++.++|.|+|
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~ 79 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAAKADAIVH 79 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence 6899999999999999999999999887666554321 111212111 136899999999999999999999999999
Q ss_pred cCCCCCC--CCCCch--------------------------------------------------------------hhH
Q 025065 86 TASPVIF--LSDNPQ--------------------------------------------------------------EWY 101 (258)
Q Consensus 86 ~a~~~~~--~~~~~~--------------------------------------------------------------~~Y 101 (258)
+|+.... +..++. +.|
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y 159 (346)
T d1oc2a_ 80 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY 159 (346)
T ss_dssp CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred hhhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence 9987532 111111 569
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHh
Q 025065 102 SLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~ 176 (258)
+.+|+++|.+++.++++++++++++||++||||..... .....++.....|. .+++ +.++|+|++|+|++++.+
T Consensus 160 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~ 238 (346)
T d1oc2a_ 160 SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 238 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHH
Confidence 99999999999999999999999999999999976543 33455566666666 3333 889999999999999999
Q ss_pred hcCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccCHHHH-HhcCCCc-c-chhHHHHHHHH
Q 025065 177 LEVPKASGRY-LLAGSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERA-KSLGINF-T-PWEVGVRGCIE 249 (258)
Q Consensus 177 ~~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~-~~lg~~p-~-~~~~~l~~~~~ 249 (258)
++++..++.| +++++..++.++++.+.+.++......... +.....+..|++|+ +.|||+| . +|+++|+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~ 318 (346)
T d1oc2a_ 239 LTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQ 318 (346)
T ss_dssp HHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHH
T ss_pred HhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHH
Confidence 9988888876 677899999999999999997543222111 23344567899999 7899999 4 79999999999
Q ss_pred HHHHc
Q 025065 250 SLMEK 254 (258)
Q Consensus 250 ~~~~~ 254 (258)
|++++
T Consensus 319 w~~~n 323 (346)
T d1oc2a_ 319 WYTDN 323 (346)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 99875
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=2e-40 Score=273.67 Aligned_cols=244 Identities=18% Similarity=0.235 Sum_probs=192.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEE------EEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTV------KATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
|||||||||||||++|+++|+++|++| +.++..........+... ....+++++.+|+.+..........+|+
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~ 79 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLARELRGVDA 79 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccccccce
Confidence 589999999999999999999999754 445443333222222222 1246899999999999999988899999
Q ss_pred EEecCCCCCCC--CCCch---------------------------------------------------hhHHHHHHHHH
Q 025065 83 VFHTASPVIFL--SDNPQ---------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 83 Vih~a~~~~~~--~~~~~---------------------------------------------------~~Y~~sK~~~e 109 (258)
|+|+|+..... ..++. +.|+.+|.++|
T Consensus 80 vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E 159 (322)
T d1r6da_ 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSD 159 (322)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred EEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 99999874221 11111 68999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 110 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 110 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
.+++.+.++++++++++||++||||++... ...+.++.++..|+ .+++ +.++|+|++|+|+++..+++++..++
T Consensus 160 ~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~~~ 238 (322)
T d1r6da_ 160 LVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGE 238 (322)
T ss_dssp HHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999987653 34566778888887 3343 78999999999999999999987777
Q ss_pred eE-EEeCCCcCHHHHHHHHHHhCCCCCCCC-CCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 185 RY-LLAGSVAQHSDILKFLREHYPTLLRSG-KLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 185 ~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~-~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
+| +++++.+++.|+++.+.+.+|...... ... +.......+|++|+ +.|||+| ++++++|+++++|++++
T Consensus 239 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n 314 (322)
T d1r6da_ 239 IYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314 (322)
T ss_dssp EEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred eeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 88 556899999999999999997532111 111 34455677999999 7799999 99999999999999975
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-41 Score=275.77 Aligned_cols=239 Identities=20% Similarity=0.253 Sum_probs=184.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+||||||||+||||++|+++|+++|++|+++++....... .+.... ...+++....|+.+. ++.++|+|||+|
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~-~~~~~d~~~~~~~~~-----~~~~~d~VihlA 73 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR-NVEHWI-GHENFELINHDVVEP-----LYIEVDQIYHLA 73 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-GTGGGT-TCTTEEEEECCTTSC-----CCCCCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHH-HHHHhc-CCCceEEEehHHHHH-----HHcCCCEEEECc
Confidence 4799999999999999999999999999999875443322 111111 123456666665543 456899999999
Q ss_pred CCCCC--CCCCch-------------------------------------------------------hhHHHHHHHHHH
Q 025065 88 SPVIF--LSDNPQ-------------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 88 ~~~~~--~~~~~~-------------------------------------------------------~~Y~~sK~~~e~ 110 (258)
+..+. +..++. ++|+.+|.++|.
T Consensus 74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~ 153 (312)
T d2b69a1 74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET 153 (312)
T ss_dssp SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence 98643 223322 579999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccccCCcCCCCC-ccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 111 AAWKFAKENGIDLVAIHPGTVIGPFFQPILN-FGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 111 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
+++.+++++|++++++||++||||+...... ..+.++.++..|+ .+++ +.++|+|++|++++++.+++.. ..+
T Consensus 154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-~~~ 232 (312)
T d2b69a1 154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-VSS 232 (312)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-CCS
T ss_pred HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-cCC
Confidence 9999999999999999999999998765432 3567788888887 3333 7899999999999999998765 456
Q ss_pred eE-EEeCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 185 RY-LLAGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 185 ~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
.| +++++..++.|+++.+++.++......... .........|++|+ +.|||+| ++++++|+++++||+++
T Consensus 233 ~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~ 307 (312)
T d2b69a1 233 PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 307 (312)
T ss_dssp CEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred ceEecCCcccchhhHHHHHHHHhCCCCceEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Confidence 67 566899999999999999997542111111 33455678899999 7899999 99999999999999864
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=5.1e-40 Score=275.47 Aligned_cols=239 Identities=18% Similarity=0.134 Sum_probs=185.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
+|||||||||||||++|+++|+++||+|+++++......... .....+..+|+++.+.+.++++++|+|||+|
T Consensus 15 nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a 87 (363)
T d2c5aa1 15 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-------MFCDEFHLVDLRVMENCLKVTEGVDHVFNLA 87 (363)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-------GTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-------cccCcEEEeechhHHHHHHHhhcCCeEeecc
Confidence 678999999999999999999999999999987655432211 1345788899999999999999999999999
Q ss_pred CCCCCC---CCCch----------------------------------------------------------hhHHHHHH
Q 025065 88 SPVIFL---SDNPQ----------------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 88 ~~~~~~---~~~~~----------------------------------------------------------~~Y~~sK~ 106 (258)
+..... ...+. ++|+.+|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~ 167 (363)
T d2c5aa1 88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL 167 (363)
T ss_dssp CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence 875431 12211 46999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCcc----HHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhh
Q 025065 107 LAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFG----AEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 107 ~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~----~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~ 177 (258)
++|++++.+.+++|++++++||+++||+++....... ........... ..++ +.++|+|++|+++++..++
T Consensus 168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~ 247 (363)
T d2c5aa1 168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 247 (363)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH
Confidence 9999999999999999999999999999765442221 11112222222 2222 6899999999999999999
Q ss_pred cCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCCCCCCCC-ccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHH
Q 025065 178 EVPKASGRY-LLAGSVAQHSDILKFLREHYPTLLRSGKL-EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 178 ~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
+.+ ..+.| +++++.+|+.|+++.+.+..+........ .+.......+|++|+ +.|||+| ++++++|+++++|+++
T Consensus 248 ~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~ 326 (363)
T d2c5aa1 248 KSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKE 326 (363)
T ss_dssp HSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHH
T ss_pred hCC-CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 875 45667 66799999999999999998754211111 133455667899999 7799999 9999999999999976
Q ss_pred c
Q 025065 254 K 254 (258)
Q Consensus 254 ~ 254 (258)
+
T Consensus 327 ~ 327 (363)
T d2c5aa1 327 Q 327 (363)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.3e-40 Score=274.78 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=178.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhc----cccCcCCcEEEEEccCCCcccHHHHhCC--CcE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLR----ELDGATERLHLFKANLLEEGSFDSAVDG--CDG 82 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~ 82 (258)
|++||||||||||++|+++|+++||+|++++|..+......+. .......+++++++|++|.+++.+++++ +|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 7899999999999999999999999999999965432211111 1112246899999999999999999974 699
Q ss_pred EEecCCCCCC--CCCCch------------------------------------------------------hhHHHHHH
Q 025065 83 VFHTASPVIF--LSDNPQ------------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 83 Vih~a~~~~~--~~~~~~------------------------------------------------------~~Y~~sK~ 106 (258)
|+|+|+..+. +..++. ++|+.+|+
T Consensus 82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~ 161 (357)
T d1db3a_ 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL 161 (357)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence 9999998543 222222 78999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC-CC--CC---CCcceeeHHHHHHHHHHhhc
Q 025065 107 LAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 107 ~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~-~~--~~---~~~~~i~v~D~a~~~~~~~~ 178 (258)
++|++++.++++++++++++||+++|||....... .....+.....++ .. ++ +.++|+|++|+|+++..+++
T Consensus 162 ~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~ 241 (357)
T d1db3a_ 162 YAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQ 241 (357)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHh
Confidence 99999999999999999999999999997554321 2234445555565 22 23 78899999999999999998
Q ss_pred CCCCCceE-EEeCCCcCHHHHHHHHHHhCCCCCC----CCCC----------------c-------------cCCCCccc
Q 025065 179 VPKASGRY-LLAGSVAQHSDILKFLREHYPTLLR----SGKL----------------E-------------EKYQPTIK 224 (258)
Q Consensus 179 ~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~----~~~~----------------~-------------~~~~~~~~ 224 (258)
++. .+.| +++++.+|+.|+++.+.+.+|.... +... . +.......
T Consensus 242 ~~~-~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 320 (357)
T d1db3a_ 242 QEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLL 320 (357)
T ss_dssp SSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCC
T ss_pred CCC-CCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCccccccc
Confidence 753 4567 6668999999999999999862110 0000 0 11223446
Q ss_pred cCHHHH-HhcCCCc-cchhHHHHHHHHHH
Q 025065 225 VSQERA-KSLGINF-TPWEVGVRGCIESL 251 (258)
Q Consensus 225 ~d~~k~-~~lg~~p-~~~~~~l~~~~~~~ 251 (258)
+|++|+ +.|||+| ++++++|++++++.
T Consensus 321 ~d~skakk~LGw~P~~sl~egI~~~I~~~ 349 (357)
T d1db3a_ 321 GDPTKAHEKLGWKPEITLREMVSEMVAND 349 (357)
T ss_dssp BCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 799999 7799999 99999999998653
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.6e-39 Score=269.89 Aligned_cols=246 Identities=16% Similarity=0.115 Sum_probs=187.4
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc-----CcCCcEEEEEccCCCcccHHHHhC--CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-----GATERLHLFKANLLEEGSFDSAVD--GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~--~~ 80 (258)
+|++||||||||||++|+++|+++||+|++++|..+......+..+. .....+.++.+|+++.+.+.+.++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 37899999999999999999999999999999975432221111111 013468899999999999998885 58
Q ss_pred cEEEecCCCCCCC--CCCch-------------------------------------------------------hhHHH
Q 025065 81 DGVFHTASPVIFL--SDNPQ-------------------------------------------------------EWYSL 103 (258)
Q Consensus 81 d~Vih~a~~~~~~--~~~~~-------------------------------------------------------~~Y~~ 103 (258)
|+|||+|+..+.. ..++. +.|+.
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~ 160 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA 160 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence 9999999985431 11211 68999
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC-C--CCC---CCcceeeHHHHHHHHHH
Q 025065 104 AKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-Q--SFA---FPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 104 sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~-~--~~~---~~~~~i~v~D~a~~~~~ 175 (258)
+|..+|.++..+.++++++++++||++||||....... .....+.....+. + ..+ +.++|+|++|+|+++..
T Consensus 161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~ 240 (339)
T d1n7ha_ 161 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL 240 (339)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHH
Confidence 99999999999999999999999999999997554321 1222233333444 2 222 78999999999999999
Q ss_pred hhcCCCCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCC------CCccCCCCccccCHHHH-HhcCCCc-cchhHHHHHH
Q 025065 176 ALEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSG------KLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGC 247 (258)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~------~~~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~ 247 (258)
+++++...+.++..+...+..++++.+.+.++...... ...+.....+..|++|+ +.|||+| ++++++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~~le~gi~~t 320 (339)
T d1n7ha_ 241 MLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMM 320 (339)
T ss_dssp HHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHH
T ss_pred HHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcCCCHHHHHHHH
Confidence 99998766667888999999999999999987532111 01123345567799999 7799999 9999999999
Q ss_pred HHHHHH
Q 025065 248 IESLME 253 (258)
Q Consensus 248 ~~~~~~ 253 (258)
++|+.+
T Consensus 321 i~~~~~ 326 (339)
T d1n7ha_ 321 VDEDLE 326 (339)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999965
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=4e-39 Score=265.52 Aligned_cols=244 Identities=20% Similarity=0.162 Sum_probs=189.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~ 86 (258)
|+|||||||||||++|+++|+++||+|++++|..+......+..+. ..++++++++|++|.+.+.+.+. .+++++|+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~ 79 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL 79 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccccccccccc
Confidence 6899999999999999999999999999999987654443333332 13579999999999999988776 37788888
Q ss_pred CCCCCC--CCCCch----------------------------------------------------hhHHHHHHHHHHHH
Q 025065 87 ASPVIF--LSDNPQ----------------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 87 a~~~~~--~~~~~~----------------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
|+.... ...++. +.|+.+|.++|.++
T Consensus 80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~ 159 (321)
T d1rpna_ 80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWIT 159 (321)
T ss_dssp CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHH
Confidence 877533 112111 78999999999999
Q ss_pred HHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC-CC--CC---CCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 113 WKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-QS--FA---FPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 113 ~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~-~~--~~---~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
..+.++++++++++||+++|||....... .....+.+...++ +. ++ +.++|+|++|+|+++..+++++....
T Consensus 160 ~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~~~~ 239 (321)
T d1rpna_ 160 VNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKADD 239 (321)
T ss_dssp HHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSSCCC
T ss_pred HHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCCcCC
Confidence 99999999999999999999997544321 2334455556665 33 23 78899999999999999999876433
Q ss_pred eEEEeCCCcCHHHHHHHHHHhCCCCCCCCC--C----ccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHHHH
Q 025065 185 RYLLAGSVAQHSDILKFLREHYPTLLRSGK--L----EEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESLME 253 (258)
Q Consensus 185 ~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~--~----~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~~~ 253 (258)
.++++++..|+.++++.+.+.++....... . .+........|++|+ +.|||+| ++++++|+++++|+.+
T Consensus 240 ~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~ 316 (321)
T d1rpna_ 240 YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR 316 (321)
T ss_dssp EEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred ceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 447779999999999999999864321111 1 123345677899999 7799999 9999999999999865
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6e-39 Score=266.80 Aligned_cols=243 Identities=19% Similarity=0.266 Sum_probs=185.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHH-HhCCCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS-AVDGCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~Vih~ 86 (258)
|||||||||||||++|+++|+++| ++|+++++..+.... +.. .++++++++|+++.+++.+ +.+++|+|||+
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~--~~~----~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~ 74 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR--FLN----HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL 74 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG--GTT----CTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhh--hcc----CCCeEEEECccCChHHHHHHHHhCCCccccc
Confidence 479999999999999999999999 589999876533211 111 3679999999999877665 66789999999
Q ss_pred CCCCCCC--CCCch---------------------------------------------------------hhHHHHHHH
Q 025065 87 ASPVIFL--SDNPQ---------------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 87 a~~~~~~--~~~~~---------------------------------------------------------~~Y~~sK~~ 107 (258)
|+..... ..++. +.|+.+|.+
T Consensus 75 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~ 154 (342)
T d2blla1 75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQL 154 (342)
T ss_dssp BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHH
T ss_pred cccccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccc
Confidence 9985421 11111 569999999
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC-------CccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHH
Q 025065 108 AEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL-------NFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 108 ~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-------~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~ 175 (258)
+|++++.+.++++++++++||+.+||+...... .....++.+++.|+ .+++ +.++|+|++|+|+++..
T Consensus 155 ~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~ 234 (342)
T d2blla1 155 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYR 234 (342)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHH
T ss_pred hhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeee
Confidence 999999999999999999999999998654321 12356677788887 3333 78999999999999999
Q ss_pred hhcCCC--CCc-eEEE-eCC-CcCHHHHHHHHHHhCCCCCC----CCCCc-------------cCCCCccccCHHHH-Hh
Q 025065 176 ALEVPK--ASG-RYLL-AGS-VAQHSDILKFLREHYPTLLR----SGKLE-------------EKYQPTIKVSQERA-KS 232 (258)
Q Consensus 176 ~~~~~~--~~~-~~~~-~~~-~~t~~e~~~~i~~~~~~~~~----~~~~~-------------~~~~~~~~~d~~k~-~~ 232 (258)
+++++. ..| +|++ +++ .+|+.|+++.+.+.++.... |.... .........|++|+ +.
T Consensus 235 ~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 314 (342)
T d2blla1 235 IIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRC 314 (342)
T ss_dssp HHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHH
T ss_pred ehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHHHHH
Confidence 998753 234 7865 454 57999999999998754321 11111 11223456799999 77
Q ss_pred cCCCc-cchhHHHHHHHHHHHHcCCC
Q 025065 233 LGINF-TPWEVGVRGCIESLMEKGFL 257 (258)
Q Consensus 233 lg~~p-~~~~~~l~~~~~~~~~~~~~ 257 (258)
|||+| ++++++|+++++||+++.=|
T Consensus 315 lgw~P~~sleegl~~ti~~y~~~~~~ 340 (342)
T d2blla1 315 LDWEPKIDMQETIDETLDFFLRTVDL 340 (342)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred HCCCcCCCHHHHHHHHHHHHHhCcCC
Confidence 99999 99999999999999887544
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.4e-38 Score=269.42 Aligned_cols=247 Identities=13% Similarity=0.106 Sum_probs=184.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcC-------------CCCcc--chhhccccC-cCCcEEEEEccCCCcc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD-------------PNSPK--TEHLRELDG-ATERLHLFKANLLEEG 71 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~-------------~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~ 71 (258)
||||||||||||||++|+++|+++||+|+++|.- ..+.. ...+..... ...+++++++|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 5899999999999999999999999999998621 00100 011111100 1357899999999999
Q ss_pred cHHHHhC--CCcEEEecCCCCCC--CCCCch-------------------------------------------------
Q 025065 72 SFDSAVD--GCDGVFHTASPVIF--LSDNPQ------------------------------------------------- 98 (258)
Q Consensus 72 ~~~~~~~--~~d~Vih~a~~~~~--~~~~~~------------------------------------------------- 98 (258)
.+.++++ ++|+|||+||.... +..++.
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence 9999997 47999999987432 111111
Q ss_pred -------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCC----------------Ccc
Q 025065 99 -------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPIL----------------NFG 143 (258)
Q Consensus 99 -------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~----------------~~~ 143 (258)
+.|+.+|+++|.++..+.++++++++++||++||||+..... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence 469999999999999999999999999999999999754321 123
Q ss_pred HHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCceE---EEeCCCcCHHHHHHHHHHhCCCCCC--CC
Q 025065 144 AEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASGRY---LLAGSVAQHSDILKFLREHYPTLLR--SG 213 (258)
Q Consensus 144 ~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~~~---~~~~~~~t~~e~~~~i~~~~~~~~~--~~ 213 (258)
..++.+...|+ .+++ +.++|+|++|+++++..+++++...|.+ +.+++.+|+.|+++.+.+..+.... +.
T Consensus 241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~ 320 (393)
T d1i24a_ 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKK 320 (393)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCE
T ss_pred hhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcce
Confidence 45566666776 3444 7899999999999999999988777733 3456889999999999887643221 11
Q ss_pred -----CCccCCCCccccCHHHHHhcCCCc-cchhHHHHHHHHHHHHc
Q 025065 214 -----KLEEKYQPTIKVSQERAKSLGINF-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 214 -----~~~~~~~~~~~~d~~k~~~lg~~p-~~~~~~l~~~~~~~~~~ 254 (258)
...+........|++|+++|||+| ++++++++++++|+++.
T Consensus 321 ~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~ 367 (393)
T d1i24a_ 321 MTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQF 367 (393)
T ss_dssp EEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred eeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHHHHH
Confidence 111234456678899997799999 99999999999998774
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.8e-38 Score=263.91 Aligned_cols=247 Identities=20% Similarity=0.179 Sum_probs=191.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhcccc--CcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELD--GATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
++|+|||||||||||++|+++|+++||+|++++|....... ....... ....+++++.+|+.|...+......++.
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~ 94 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 94 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence 56899999999999999999999999999999975443221 1111111 1135789999999999988888889999
Q ss_pred EEecCCCCCC--CCCCch---------------------------------------------------hhHHHHHHHHH
Q 025065 83 VFHTASPVIF--LSDNPQ---------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 83 Vih~a~~~~~--~~~~~~---------------------------------------------------~~Y~~sK~~~e 109 (258)
|+|+++.... +..++. +.|+.+|.++|
T Consensus 95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E 174 (341)
T d1sb8a_ 95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE 174 (341)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred cccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHH
Confidence 9999986432 111111 78999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCccccCCcCCCCC---ccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCC
Q 025065 110 EAAWKFAKENGIDLVAIHPGTVIGPFFQPILN---FGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 110 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
++++.+.++.+++++++||++|||++..+... ....++..++.|+ .+++ +.++|+|++|+|.++..++..+.
T Consensus 175 ~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~ 254 (341)
T d1sb8a_ 175 LYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGL 254 (341)
T ss_dssp HHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccc
Confidence 99999999999999999999999998765432 2356677778887 3333 78999999999999999988754
Q ss_pred C--CceE-EEeCCCcCHHHHHHHHHHhCCCCCCCCCCc-------cCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHH
Q 025065 182 A--SGRY-LLAGSVAQHSDILKFLREHYPTLLRSGKLE-------EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIE 249 (258)
Q Consensus 182 ~--~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~ 249 (258)
. .+.| +++++..|+.|+++.+.+.++....+.... +........|++|+ +.|||+| ++++++|+++++
T Consensus 255 ~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~ 334 (341)
T d1sb8a_ 255 DARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMP 334 (341)
T ss_dssp GGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHH
T ss_pred cccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCCHHHHHHHHHH
Confidence 2 3377 445789999999999999886432222111 23344567899999 7799999 999999999999
Q ss_pred HHHH
Q 025065 250 SLME 253 (258)
Q Consensus 250 ~~~~ 253 (258)
||++
T Consensus 335 wy~~ 338 (341)
T d1sb8a_ 335 WYIM 338 (341)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3e-38 Score=262.19 Aligned_cols=244 Identities=17% Similarity=0.148 Sum_probs=180.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 84 (258)
|||||||||||||++|+++|+++||+|++++|....... ....... ..+++++++|++|.+.+.++++ ++|+||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence 579999999999999999999999999999875433321 1111111 3579999999999999999987 799999
Q ss_pred ecCCCCCC--CCCCch----------------------------------------------------hhHHHHHHHHHH
Q 025065 85 HTASPVIF--LSDNPQ----------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 85 h~a~~~~~--~~~~~~----------------------------------------------------~~Y~~sK~~~e~ 110 (258)
|+||..+. +..++. ++|+.+|.++|.
T Consensus 79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~ 158 (338)
T d1udca_ 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ 158 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhH
Confidence 99997542 222322 789999999999
Q ss_pred HHHHHHHH-cCCcEEEEcCCccccCCcCCCC--------Ccc-HHHHHHHHcCCCC---C--------C-CCcceeeHHH
Q 025065 111 AAWKFAKE-NGIDLVAIHPGTVIGPFFQPIL--------NFG-AEVILNLINGDQS---F--------A-FPYIFVEIRD 168 (258)
Q Consensus 111 ~~~~~~~~-~~~~~~ilRp~~v~G~~~~~~~--------~~~-~~~~~~~~~g~~~---~--------~-~~~~~i~v~D 168 (258)
++..+..+ .+++++++||+++||+...... ... +.++.....+... + + +.++|+|++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D 238 (338)
T d1udca_ 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_dssp HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHH
T ss_pred HHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEee
Confidence 99876665 5899999999999998654321 112 2233333332211 1 2 5789999999
Q ss_pred HHHHHHHhhcCCC---CCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHH-HhcCCCc-cch
Q 025065 169 VVYAHIRALEVPK---ASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERA-KSLGINF-TPW 240 (258)
Q Consensus 169 ~a~~~~~~~~~~~---~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~ 240 (258)
++.++..+..... ..++|++ +++++|+.|+++.+.+.+|......... +.......+|++|+ +.|||+| +++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgwkp~~~l 318 (338)
T d1udca_ 239 LADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTL 318 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCCCH
T ss_pred hhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCCCCCCCEeeECHHHHHHHHCCCcCCCH
Confidence 9998887665332 2237755 5788999999999999987432111111 23345667899999 6799999 999
Q ss_pred hHHHHHHHHHHHHc
Q 025065 241 EVGVRGCIESLMEK 254 (258)
Q Consensus 241 ~~~l~~~~~~~~~~ 254 (258)
+++|+++++|++++
T Consensus 319 ~egi~~ti~w~~~~ 332 (338)
T d1udca_ 319 DEMAQDTWHWQSRH 332 (338)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999997
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-36 Score=250.60 Aligned_cols=243 Identities=16% Similarity=0.121 Sum_probs=177.5
Q ss_pred cEE-EEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-----cCCcEEEEEccCCCcccHHHHhC--CC
Q 025065 9 KVV-CVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-----ATERLHLFKANLLEEGSFDSAVD--GC 80 (258)
Q Consensus 9 ~~i-lItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~--~~ 80 (258)
||| ||||||||||++|+++|+++||+|++++|..+......+..+.. ...+++++++|++|++.+..++. ++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 578 99999999999999999999999999999765433222221111 13478999999999999999886 47
Q ss_pred cEEEecCCCCCCC--CCCch------------------------------------------------------hhHHHH
Q 025065 81 DGVFHTASPVIFL--SDNPQ------------------------------------------------------EWYSLA 104 (258)
Q Consensus 81 d~Vih~a~~~~~~--~~~~~------------------------------------------------------~~Y~~s 104 (258)
++|+|+++..... ...+. ++|+.|
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s 160 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA 160 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence 8999998864320 00000 689999
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC-C--CCC---CCcceeeHHHHHHHHHHh
Q 025065 105 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-Q--SFA---FPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 105 K~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~-~--~~~---~~~~~i~v~D~a~~~~~~ 176 (258)
|+++|+++..+.++++++++++||+++|||....... .....+.....+. + .++ +.++|+|++|+++++..+
T Consensus 161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~ 240 (347)
T d1t2aa_ 161 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM 240 (347)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHH
Confidence 9999999999999999999999999999997554321 1122222223333 2 232 789999999999999999
Q ss_pred hcCCCCCceEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCc-----------------------cCCCCccccCHHHH-Hh
Q 025065 177 LEVPKASGRYLLAGSVAQHSDILKFLREHYPTLLRSGKLE-----------------------EKYQPTIKVSQERA-KS 232 (258)
Q Consensus 177 ~~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~d~~k~-~~ 232 (258)
+++......++..+...++.+....+....+......... +.....+.+|++|+ +.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~~ 320 (347)
T d1t2aa_ 241 LQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQK 320 (347)
T ss_dssp HHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHH
T ss_pred hhcCCCccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHHHHHH
Confidence 9987644444667889999999999988876432110000 12233456799999 77
Q ss_pred cCCCc-cchhHHHHHHHHHH
Q 025065 233 LGINF-TPWEVGVRGCIESL 251 (258)
Q Consensus 233 lg~~p-~~~~~~l~~~~~~~ 251 (258)
|||+| ++++++|++++++.
T Consensus 321 Lgw~P~~sl~e~i~~~I~~~ 340 (347)
T d1t2aa_ 321 LNWKPRVAFDELVREMVHAD 340 (347)
T ss_dssp HCCCCCSCHHHHHHHHHHHH
T ss_pred HCCCcCCCHHHHHHHHHHHH
Confidence 99999 99999999998654
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=3.2e-36 Score=253.98 Aligned_cols=247 Identities=16% Similarity=0.136 Sum_probs=177.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHH-CCCEEEEEEcCCCCcc--------ch---hhcc-----ccCcCCcEEEEEccCCCc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPNSPK--------TE---HLRE-----LDGATERLHLFKANLLEE 70 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~--------~~---~~~~-----~~~~~~~~~~~~~Dl~~~ 70 (258)
.||||||||+||||++|+++|++ .||+|+++++-..... .. .+.. .......+.++++|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 46899999999999999999986 6899999985221100 00 0000 001134688999999999
Q ss_pred ccHHHHhC---CCcEEEecCCCCCCC--CCCch-----------------------------------------------
Q 025065 71 GSFDSAVD---GCDGVFHTASPVIFL--SDNPQ----------------------------------------------- 98 (258)
Q Consensus 71 ~~~~~~~~---~~d~Vih~a~~~~~~--~~~~~----------------------------------------------- 98 (258)
+.+.++++ ++|+|+|+|+..... ...+.
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 99998885 579999999975431 11111
Q ss_pred -----------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCc--------cHHHHHHHHc----C--
Q 025065 99 -----------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNF--------GAEVILNLIN----G-- 153 (258)
Q Consensus 99 -----------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~--------~~~~~~~~~~----g-- 153 (258)
++|+.+|..+|++++.+.+.+|++++++||+++|||.+...... .+.++.+++. +
T Consensus 162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~ 241 (383)
T d1gy8a_ 162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR 241 (383)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccccc
Confidence 67999999999999999999999999999999999987654221 1223333221 1
Q ss_pred ----------C--CCC--------C-CCcceeeHHHHHHHHHHhhcCC---------CCCceEEE-eCCCcCHHHHHHHH
Q 025065 154 ----------D--QSF--------A-FPYIFVEIRDVVYAHIRALEVP---------KASGRYLL-AGSVAQHSDILKFL 202 (258)
Q Consensus 154 ----------~--~~~--------~-~~~~~i~v~D~a~~~~~~~~~~---------~~~~~~~~-~~~~~t~~e~~~~i 202 (258)
. .++ + +.|+|+|++|+|+++..+++.. ...++|++ +++++|+.|+++.+
T Consensus 242 ~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i 321 (383)
T d1gy8a_ 242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVA 321 (383)
T ss_dssp ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHH
T ss_pred chhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHH
Confidence 1 111 1 5689999999999999988642 11236855 68899999999999
Q ss_pred HHhCCCCCCCCCCc--cCCCCccccCHHHH-HhcCCCc-cchhHHHHHH-HHHHHHc
Q 025065 203 REHYPTLLRSGKLE--EKYQPTIKVSQERA-KSLGINF-TPWEVGVRGC-IESLMEK 254 (258)
Q Consensus 203 ~~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~-~~~~~~~ 254 (258)
.+.+|......... +........|++|+ +.|||+| ++++++|+++ +.|++.+
T Consensus 322 ~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~ 378 (383)
T d1gy8a_ 322 RKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH 378 (383)
T ss_dssp HHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHHhCCCCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence 99987532111111 23445667899999 7799999 9999999887 6899886
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.3e-36 Score=249.98 Aligned_cols=245 Identities=17% Similarity=0.186 Sum_probs=177.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 84 (258)
|.|||||||||||++|+++|+++|++|+++++....... ...... ...+++++++|++|.+.+.+++. ++|+||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh--cccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 569999999999999999999999999999865433221 111111 13578999999999999999886 799999
Q ss_pred ecCCCCCC--CCCCch-------------------------------------------------------hhHHHHHHH
Q 025065 85 HTASPVIF--LSDNPQ-------------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 85 h~a~~~~~--~~~~~~-------------------------------------------------------~~Y~~sK~~ 107 (258)
|+||.... ....+. ++|+.+|.+
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 159 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYA 159 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHH
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHH
Confidence 99998642 111212 679999999
Q ss_pred HHHHHHHHHHH--cCCcEEEEcCCccccCCcCCCC--------CccHHHHHHHHcCC--C--CCC---------CCccee
Q 025065 108 AEEAAWKFAKE--NGIDLVAIHPGTVIGPFFQPIL--------NFGAEVILNLINGD--Q--SFA---------FPYIFV 164 (258)
Q Consensus 108 ~e~~~~~~~~~--~~~~~~ilRp~~v~G~~~~~~~--------~~~~~~~~~~~~g~--~--~~~---------~~~~~i 164 (258)
+|++++.+.+. .+++++++||+++||+...... ......+.....+. + +++ ..+|++
T Consensus 160 ~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~ 239 (347)
T d1z45a2 160 IENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYI 239 (347)
T ss_dssp HHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEE
T ss_pred HHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeee
Confidence 99999998764 4799999999999997543211 11223333333333 2 222 457899
Q ss_pred eHHHHHHHHHHhhcCC------C-CCceEEE-eCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHH-Hhc
Q 025065 165 EIRDVVYAHIRALEVP------K-ASGRYLL-AGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERA-KSL 233 (258)
Q Consensus 165 ~v~D~a~~~~~~~~~~------~-~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~l 233 (258)
++.|.+.+++.+++.. . ..++|++ +++++|+.|+++.+.+.+|......... +.......+|++|+ +.|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~sk~~~~l 319 (347)
T d1z45a2 240 HVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKREL 319 (347)
T ss_dssp EHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCCHHHHHHT
T ss_pred eeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCCCCEeeECHHHHHHHH
Confidence 9999999988887632 1 2236744 5899999999999999987532222111 33445667899999 779
Q ss_pred CCCc-cchhHHHHHHHHHHHHcC
Q 025065 234 GINF-TPWEVGVRGCIESLMEKG 255 (258)
Q Consensus 234 g~~p-~~~~~~l~~~~~~~~~~~ 255 (258)
||+| ++++++|+++++|++++.
T Consensus 320 Gw~p~~~lee~i~~ti~w~~~np 342 (347)
T d1z45a2 320 KWQTELQVEDSCKDLWKWTTENP 342 (347)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHCT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCh
Confidence 9999 999999999999999873
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-36 Score=251.56 Aligned_cols=245 Identities=18% Similarity=0.146 Sum_probs=178.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-----hhhcccc-CcCCcEEEEEccCCCcccHHHHhCC--C
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-----EHLRELD-GATERLHLFKANLLEEGSFDSAVDG--C 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~--~ 80 (258)
|||||||||||||++|+++|+++||+|+++++....... ....... ....++.++++|++|.+.+.+++.+ +
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 82 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence 689999999999999999999999999999863322111 1111111 0136789999999999999998754 6
Q ss_pred cEEEecCCCCCCC--CCCch----------------------------------------------------hhHHHHHH
Q 025065 81 DGVFHTASPVIFL--SDNPQ----------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 81 d~Vih~a~~~~~~--~~~~~----------------------------------------------------~~Y~~sK~ 106 (258)
++|+|+||..+.. ..++. ++|+.+|.
T Consensus 83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~ 162 (346)
T d1ek6a_ 83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKF 162 (346)
T ss_dssp EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHH
T ss_pred ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHH
Confidence 7899999986431 11222 68999999
Q ss_pred HHHHHHHHHHHH-cCCcEEEEcCCccccCCcCCCC--------Cc-cHHHHHHHHcCC-C--------CC--C-CCccee
Q 025065 107 LAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQPIL--------NF-GAEVILNLINGD-Q--------SF--A-FPYIFV 164 (258)
Q Consensus 107 ~~e~~~~~~~~~-~~~~~~ilRp~~v~G~~~~~~~--------~~-~~~~~~~~~~g~-~--------~~--~-~~~~~i 164 (258)
.+|+.+..+++. .+++.+++||+++||+...... .. ...++....... + .. + +.++|+
T Consensus 163 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi 242 (346)
T d1ek6a_ 163 FIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYI 242 (346)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEE
T ss_pred HHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEE
Confidence 999999988776 4899999999999998654321 11 122223222211 1 11 1 678999
Q ss_pred eHHHHHHHHHHhhcCCC---CCceE-EEeCCCcCHHHHHHHHHHhCCCCCCCCCCc---cCCCCccccCHHHH-HhcCCC
Q 025065 165 EIRDVVYAHIRALEVPK---ASGRY-LLAGSVAQHSDILKFLREHYPTLLRSGKLE---EKYQPTIKVSQERA-KSLGIN 236 (258)
Q Consensus 165 ~v~D~a~~~~~~~~~~~---~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~-~~lg~~ 236 (258)
|++|+|.++..++.... ..++| +++++.+++.|+++.+.+.++... +.... +........|++|+ +.|||+
T Consensus 243 ~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~-~~~~~~~~~~e~~~~~~d~~k~~~~lgw~ 321 (346)
T d1ek6a_ 243 HVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI-PYKVVARREGDVAACYANPSLAQEELGWT 321 (346)
T ss_dssp EHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC-CEEEECCCTTCCSEECBCCHHHHHTTCCC
T ss_pred EEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCC-CeEECCCCCCCCCEeeECHHHHHHHHCCC
Confidence 99999999988765432 23378 455789999999999999997532 21111 33445667899999 779999
Q ss_pred c-cchhHHHHHHHHHHHHc
Q 025065 237 F-TPWEVGVRGCIESLMEK 254 (258)
Q Consensus 237 p-~~~~~~l~~~~~~~~~~ 254 (258)
| ++++|+|+++++|++++
T Consensus 322 p~~slee~I~~~i~w~~~n 340 (346)
T d1ek6a_ 322 AALGLDRMCEDLWRWQKQN 340 (346)
T ss_dssp CCCCHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHHhC
Confidence 9 99999999999999987
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=6.6e-36 Score=249.48 Aligned_cols=246 Identities=15% Similarity=0.143 Sum_probs=185.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V 83 (258)
+++|||||||||||||++|+++|+++||+|++++|+.+.... +.......++++++.+|++|++.+.+++. .+|+|
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~--~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v 83 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS--LFETARVADGMQSEIGDIRDQNKLLESIREFQPEIV 83 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSC--HHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHH--HHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhh
Confidence 367999999999999999999999999999999998765432 11111223579999999999999998886 57999
Q ss_pred EecCCCCCC--CCCCch-----------------------------------------------------hhHHHHHHHH
Q 025065 84 FHTASPVIF--LSDNPQ-----------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 84 ih~a~~~~~--~~~~~~-----------------------------------------------------~~Y~~sK~~~ 108 (258)
+|+|+.... +...+. ++|+.+|..+
T Consensus 84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~ 163 (356)
T d1rkxa_ 84 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCA 163 (356)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHH
T ss_pred hhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccc
Confidence 999997533 112222 6799999999
Q ss_pred HHHHHHHHH---------HcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC---CCcceeeHHHHHHHHHH
Q 025065 109 EEAAWKFAK---------ENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA---FPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 109 e~~~~~~~~---------~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~---~~~~~i~v~D~a~~~~~ 175 (258)
|..+..+.. .+++.++++||+++|||++.........++.....+. ..++ +.++++|++|+++++..
T Consensus 164 e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~ 243 (356)
T d1rkxa_ 164 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLL 243 (356)
T ss_dssp HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHH
T ss_pred hhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhh
Confidence 999887765 3478999999999999987654444455555555554 3333 78999999999999999
Q ss_pred hhcCCCCCc-----eEE---EeCCCcCHHHHHHHHHHhCCCCCCCC---CCccCCCCccccCHHHH-HhcCCCc-cchhH
Q 025065 176 ALEVPKASG-----RYL---LAGSVAQHSDILKFLREHYPTLLRSG---KLEEKYQPTIKVSQERA-KSLGINF-TPWEV 242 (258)
Q Consensus 176 ~~~~~~~~~-----~~~---~~~~~~t~~e~~~~i~~~~~~~~~~~---~~~~~~~~~~~~d~~k~-~~lg~~p-~~~~~ 242 (258)
++.++...+ ..+ ..+...++.++++.+.+.++...... ...+.....+..|++|+ +.|||+| +++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P~~~l~e 323 (356)
T d1rkxa_ 244 LAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNT 323 (356)
T ss_dssp HHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred hhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCCcCeeeEcHHHHHHHHCCCcCCCHHH
Confidence 987643222 111 22567899999999999987432111 11133455667899999 7799999 99999
Q ss_pred HHHHHHHHHHH
Q 025065 243 GVRGCIESLME 253 (258)
Q Consensus 243 ~l~~~~~~~~~ 253 (258)
+|+++++||+.
T Consensus 324 gi~~ti~wyk~ 334 (356)
T d1rkxa_ 324 TLEYIVGWHKN 334 (356)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999986
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=3.8e-35 Score=243.76 Aligned_cols=244 Identities=30% Similarity=0.420 Sum_probs=184.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
++|+||||||+||||++|+++|+++||+|++++|+..+... ...............+.+|+++.+.+.+++.++|+|+|
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~ 89 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence 57999999999999999999999999999999997543211 11111111123456688999999999999999999999
Q ss_pred cCCCCCCCCCCch-------------------------------------------------------------------
Q 025065 86 TASPVIFLSDNPQ------------------------------------------------------------------- 98 (258)
Q Consensus 86 ~a~~~~~~~~~~~------------------------------------------------------------------- 98 (258)
+++..........
T Consensus 90 ~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~ 169 (342)
T d1y1pa1 90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP 169 (342)
T ss_dssp CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred hcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCC
Confidence 9998654322111
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC-CCC-C--CCcceeeH
Q 025065 99 ----EWYSLAKTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-QSF-A--FPYIFVEI 166 (258)
Q Consensus 99 ----~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~-~~~-~--~~~~~i~v 166 (258)
+.|+.+|..+|.+++.+.+++ +++++++||+.+|||...+... ....++..+..|. ... + +.++|+|+
T Consensus 170 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v 249 (342)
T d1y1pa1 170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSA 249 (342)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEH
T ss_pred CCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeH
Confidence 359999999999999998876 4778899999999996544322 3455667777776 222 2 77899999
Q ss_pred HHHHHHHHHhhcCCCCCc-eEEEeCCCcCHHHHHHHHHHhCCCCCCCCCCccCCCCccccC----HHHHHhcCCCc-cch
Q 025065 167 RDVVYAHIRALEVPKASG-RYLLAGSVAQHSDILKFLREHYPTLLRSGKLEEKYQPTIKVS----QERAKSLGINF-TPW 240 (258)
Q Consensus 167 ~D~a~~~~~~~~~~~~~~-~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d----~~k~~~lg~~p-~~~ 240 (258)
+|+|++++.+++++...| .|+++++.+|++|+++.|.+.+|...+|.............+ .++++.|||++ +++
T Consensus 250 ~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~~~s~~~~k~lg~~~~~~l 329 (342)
T d1y1pa1 250 VDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSI 329 (342)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHHTTCCSCCCH
T ss_pred HHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCcccccccchHHHHHHHHcCCCCCcCH
Confidence 999999999999988777 558889999999999999999987666655442222222222 23337799999 999
Q ss_pred hHHHHHHHHH
Q 025065 241 EVGVRGCIES 250 (258)
Q Consensus 241 ~~~l~~~~~~ 250 (258)
+++|+++++.
T Consensus 330 ee~i~d~I~s 339 (342)
T d1y1pa1 330 EESIKDLVGS 339 (342)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHHh
Confidence 9999999864
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.8e-35 Score=239.47 Aligned_cols=227 Identities=18% Similarity=0.163 Sum_probs=162.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEe
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFH 85 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih 85 (258)
+|||||||||||||++|+++|+++|+.|+++++..+ .|+++.+.+.++++ .+|.|+|
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------------~~~~~~~~~~~~~~~~~~d~v~~ 60 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------------LNLLDSRAVHDFFASERIDQVYL 60 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh---------------------ccccCHHHHHHHHhhcCCCEEEE
Confidence 579999999999999999999999999887654321 34555555555543 3555555
Q ss_pred cCCCCCCCC---CCc--------------------------------------------------------hhhHHHHHH
Q 025065 86 TASPVIFLS---DNP--------------------------------------------------------QEWYSLAKT 106 (258)
Q Consensus 86 ~a~~~~~~~---~~~--------------------------------------------------------~~~Y~~sK~ 106 (258)
+|+...... ..+ .++|+.+|.
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~ 140 (315)
T d1e6ua_ 61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKI 140 (315)
T ss_dssp CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHH
T ss_pred cchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHH
Confidence 554432100 000 046999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCc--c-H-----HHHHHHHcCC--CCCC---CCcceeeHHHHHHHH
Q 025065 107 LAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNF--G-A-----EVILNLINGD--QSFA---FPYIFVEIRDVVYAH 173 (258)
Q Consensus 107 ~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~--~-~-----~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~ 173 (258)
++|++++.+.+++|++++++||++||||++...... . . ........+. ...+ +.++|+|++|+++++
T Consensus 141 ~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~ 220 (315)
T d1e6ua_ 141 AGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAAS 220 (315)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHH
Confidence 999999999999999999999999999976543221 1 1 1122223333 2222 678999999999999
Q ss_pred HHhhcCCC---------CCceE-EEeCCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHHHhcCCCc-cch
Q 025065 174 IRALEVPK---------ASGRY-LLAGSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERAKSLGINF-TPW 240 (258)
Q Consensus 174 ~~~~~~~~---------~~~~~-~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~p-~~~ 240 (258)
..++.+.. ..+.+ .+++...++.++++.+.+.++......... +.......+|++|+++|||+| +++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~d~sk~k~Lg~~p~~~l 300 (315)
T d1e6ua_ 221 IHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISL 300 (315)
T ss_dssp HHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHHTTCCCCCCH
T ss_pred HHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCceeccCHHHHHHcCCCCCCCH
Confidence 99987642 12245 556888999999999999987543222111 233445678999997799999 999
Q ss_pred hHHHHHHHHHHHHcC
Q 025065 241 EVGVRGCIESLMEKG 255 (258)
Q Consensus 241 ~~~l~~~~~~~~~~~ 255 (258)
+++|+++++||+++.
T Consensus 301 ~e~i~~ti~w~~~N~ 315 (315)
T d1e6ua_ 301 EAGLASTYQWFLENQ 315 (315)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999999864
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=3.9e-35 Score=242.77 Aligned_cols=243 Identities=16% Similarity=0.179 Sum_probs=182.2
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCC--CcEEEecC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDG--CDGVFHTA 87 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih~a 87 (258)
||||||||||||++|+++|+++||+|+++++-........+..+.. ..+++++.+|+++.+.+.+++++ +|+|||+|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a 80 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 80 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence 7999999999999999999999999999886433332222222211 35789999999999999999875 69999999
Q ss_pred CCCCCC--CCCch-------------------------------------------------------------------
Q 025065 88 SPVIFL--SDNPQ------------------------------------------------------------------- 98 (258)
Q Consensus 88 ~~~~~~--~~~~~------------------------------------------------------------------- 98 (258)
+..... ..++.
T Consensus 81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T d1orra_ 81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF 160 (338)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence 986431 11111
Q ss_pred -hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHH---c--CC--CCCC---CCcceee
Q 025065 99 -EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLI---N--GD--QSFA---FPYIFVE 165 (258)
Q Consensus 99 -~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~---~--g~--~~~~---~~~~~i~ 165 (258)
+.|+.+|..+|.++..+.+.++...+++|++++||+....... ....++...+ . ++ .+++ +.++|+|
T Consensus 161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~ 240 (338)
T d1orra_ 161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence 5799999999999999999999999999999999876544322 1233343332 2 22 2233 7799999
Q ss_pred HHHHHHHHHHhhcCCC-CC-ceEEEe---CCCcCHHHHHHHHHHhCCCCCCCCCCc--cCCCCccccCHHHH-HhcCCCc
Q 025065 166 IRDVVYAHIRALEVPK-AS-GRYLLA---GSVAQHSDILKFLREHYPTLLRSGKLE--EKYQPTIKVSQERA-KSLGINF 237 (258)
Q Consensus 166 v~D~a~~~~~~~~~~~-~~-~~~~~~---~~~~t~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg~~p 237 (258)
++|++++++.++++.. .. ++|++. +..+++.|+++.+.+..+......... +.....+..|++|+ +.|||+|
T Consensus 241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p 320 (338)
T d1orra_ 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSP 320 (338)
T ss_dssp HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHHCCCC
T ss_pred ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCCcCeeeECHHHHHHHHCCCc
Confidence 9999999999998753 23 366543 567899999999999987532111111 33445667799999 7799999
Q ss_pred -cchhHHHHHHHHHHHH
Q 025065 238 -TPWEVGVRGCIESLME 253 (258)
Q Consensus 238 -~~~~~~l~~~~~~~~~ 253 (258)
++++++|+++++|++.
T Consensus 321 ~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 321 KVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp CSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc
Confidence 9999999999999985
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=1.5e-34 Score=233.41 Aligned_cols=213 Identities=12% Similarity=0.037 Sum_probs=168.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~ 86 (258)
|||||||||||||++|+++|.++||+|++++|+. +|++|.+.+.++++ ++|+|||+
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~~~d~vih~ 59 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEKKPNVVINC 59 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------ccCCCHHHHHHHHHHcCCCEEEee
Confidence 5799999999999999999999999999998753 58899998998886 58999999
Q ss_pred CCCCCCC--CCCch--------------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 87 ASPVIFL--SDNPQ--------------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 87 a~~~~~~--~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
|+..... ...+. +.|+.+|..+|+++
T Consensus 60 a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~-- 137 (281)
T d1vl0a_ 60 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFV-- 137 (281)
T ss_dssp CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHH--
T ss_pred ccccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHH--
Confidence 9985431 11111 67999999999885
Q ss_pred HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC-CCcceeeHHHHHHHHHHhhcCCCCCceE-EEeC
Q 025065 115 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALEVPKASGRY-LLAG 190 (258)
Q Consensus 115 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~-~~~~ 190 (258)
++.+.+++++||+++||++.+ ....++..+..+. ..++ +.++++|++|+++++..++++.. .|.| ++++
T Consensus 138 --~~~~~~~~i~R~~~vyG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~-~g~~~~~~~ 210 (281)
T d1vl0a_ 138 --KALNPKYYIVRTAWLYGDGNN----FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN-YGTFHCTCK 210 (281)
T ss_dssp --HHHCSSEEEEEECSEESSSSC----HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC-CEEEECCCB
T ss_pred --HHhCCCccccceeEEeCCCcc----cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc-cCceeEeCC
Confidence 455899999999999999743 3445566666666 4445 88999999999999999998875 4666 6778
Q ss_pred CCcCHHHHHHHHHHhCCCCC----CCCCCc---cCCCCccccCHHHH-HhcCCCccchhHHHHHHHHHHH
Q 025065 191 SVAQHSDILKFLREHYPTLL----RSGKLE---EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLM 252 (258)
Q Consensus 191 ~~~t~~e~~~~i~~~~~~~~----~~~~~~---~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~~~ 252 (258)
+.+|+.|+++.+++.+|... ++.... ...+....+|++|+ +.+||+|++++++|++++++++
T Consensus 211 ~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 211 GICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQ 280 (281)
T ss_dssp SCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHT
T ss_pred CccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHHhCCCCCCHHHHHHHHHHHhc
Confidence 99999999999999987532 121110 11123446799999 7799999999999999999986
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=3.1e-32 Score=222.12 Aligned_cols=231 Identities=20% Similarity=0.198 Sum_probs=155.8
Q ss_pred EEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHH-HH-----hCCCcEE
Q 025065 11 VCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFD-SA-----VDGCDGV 83 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~-----~~~~d~V 83 (258)
||||||+||||++|+++|+++|+ +|+++++-........+... ...|..+.+.+. .. +..+++|
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL---------NIADYMDKEDFLIQIMAGEEFGDVEAI 72 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS---------CCSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccccc---------chhhhccchHHHHHHhhhhcccchhhh
Confidence 89999999999999999999995 79988754332222111111 112222222222 22 2357899
Q ss_pred EecCCCCCCCCCCch--------------------------------------------------hhHHHHHHHHHHHHH
Q 025065 84 FHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTLAEEAAW 113 (258)
Q Consensus 84 ih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~ 113 (258)
+|+|+.......... +.|+.+|..+|.+++
T Consensus 73 ~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~ 152 (307)
T d1eq2a_ 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVR 152 (307)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHH
T ss_pred hhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcc
Confidence 999987554433333 789999999999999
Q ss_pred HHHHHcCCcEEEEcCCccccCCcCCCC--C-ccHHHHHHHHcCC-CCC--C---CCcceeeHHHHHHHHHHhhcCCCCCc
Q 025065 114 KFAKENGIDLVAIHPGTVIGPFFQPIL--N-FGAEVILNLINGD-QSF--A---FPYIFVEIRDVVYAHIRALEVPKASG 184 (258)
Q Consensus 114 ~~~~~~~~~~~ilRp~~v~G~~~~~~~--~-~~~~~~~~~~~g~-~~~--~---~~~~~i~v~D~a~~~~~~~~~~~~~~ 184 (258)
.+.++++++++++||+++|||...... . ....++..+..++ ... + ..++|+|++|++.++..+++++. .+
T Consensus 153 ~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-~~ 231 (307)
T d1eq2a_ 153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SG 231 (307)
T ss_dssp HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CE
T ss_pred ccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-cc
Confidence 999999999999999999999765331 1 2234455666666 222 3 68899999999999999998764 45
Q ss_pred eE-EEeCCCcCHHHHHHHHHHhCCCCCCC-----CCCccCCCCccccCHHHH-HhcCCCc-cchhHHHHHHHHHH
Q 025065 185 RY-LLAGSVAQHSDILKFLREHYPTLLRS-----GKLEEKYQPTIKVSQERA-KSLGINF-TPWEVGVRGCIESL 251 (258)
Q Consensus 185 ~~-~~~~~~~t~~e~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~d~~k~-~~lg~~p-~~~~~~l~~~~~~~ 251 (258)
.| +++++..|++|+++.+.+..+...+. .............|++|+ +.+||+| ++++++|+++++|+
T Consensus 232 ~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 232 IFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp EEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred ccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 66 66799999999999998877533221 111122333445699999 7789999 99999999999995
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.95 E-value=6.4e-28 Score=195.55 Aligned_cols=220 Identities=14% Similarity=0.144 Sum_probs=153.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEEec
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~ 86 (258)
|||||||||||||++|+++|.++|+.| +++++... +.+|++|.+.+.++++ ++|+|||+
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~ 61 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------------FCGDFSNPKGVAETVRKLRPDVIVNA 61 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------------SCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------------ccCcCCCHHHHHHHHHHcCCCEEEEe
Confidence 579999999999999999999888654 44444321 2379999999999886 47999999
Q ss_pred CCCCCC--CCCCch--------------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 87 ASPVIF--LSDNPQ--------------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 87 a~~~~~--~~~~~~--------------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
||.... +...+. +.|+.+|..+|+.+..
T Consensus 62 Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD 141 (298)
T ss_dssp CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred cccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHh
Confidence 997643 233332 6899999999998654
Q ss_pred HHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC-CCcceeeHHHHHHHHHHhhc----CCCCCceEE
Q 025065 115 FAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA-FPYIFVEIRDVVYAHIRALE----VPKASGRYL 187 (258)
Q Consensus 115 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~-~~~~~i~v~D~a~~~~~~~~----~~~~~~~~~ 187 (258)
+ .....++|++..|+..... ....+...+..+. ...+ ..++++|+.|+++++..++. .+...++|+
T Consensus 142 ~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n 214 (298)
T d1n2sa_ 142 N----CPKHLIFRTSWVYAGKGNN---FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYH 214 (298)
T ss_dssp H----CSSEEEEEECSEECSSSCC---HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEE
T ss_pred h----hcccccccccceeeccCCc---cchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhcccccccccc
Confidence 3 4566777777766543221 1222233333333 2223 77889999999999888775 344556885
Q ss_pred -EeCCCcCHHHHHHHHHHhCCCC----CCCCCCc---------cCCCCccccCHHHH-HhcCCCccchhHHHHHHHHHHH
Q 025065 188 -LAGSVAQHSDILKFLREHYPTL----LRSGKLE---------EKYQPTIKVSQERA-KSLGINFTPWEVGVRGCIESLM 252 (258)
Q Consensus 188 -~~~~~~t~~e~~~~i~~~~~~~----~~~~~~~---------~~~~~~~~~d~~k~-~~lg~~p~~~~~~l~~~~~~~~ 252 (258)
++++.++..|+++.+.+..+.. ..+...+ ...+.+..+|++|+ +.+||+|++++++|+++++++.
T Consensus 215 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~~~~~gl~~~i~~~~ 294 (298)
T d1n2sa_ 215 LVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMF 294 (298)
T ss_dssp CCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHHHH
T ss_pred ccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCCcHHHHHHHHHHHHH
Confidence 4568899999999887765311 1111000 01123446899999 7799999999999999999987
Q ss_pred Hc
Q 025065 253 EK 254 (258)
Q Consensus 253 ~~ 254 (258)
..
T Consensus 295 ~~ 296 (298)
T d1n2sa_ 295 TT 296 (298)
T ss_dssp SC
T ss_pred hh
Confidence 64
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.95 E-value=1.4e-28 Score=200.62 Aligned_cols=199 Identities=12% Similarity=0.149 Sum_probs=143.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+++||||||||||||++|+++|+++||+|++++|+.............. ...+++++++|+++.+.+.+.+.++++++|
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~ 81 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 81 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence 3578999999999999999999999999999999776543211111111 135789999999999999999999999999
Q ss_pred cCCCCCCCCCCch--------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 86 TASPVIFLSDNPQ--------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 86 ~a~~~~~~~~~~~--------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
+++.......... ..+..++...+..+..+....+++++++||+.+||
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g 161 (312)
T d1qyda_ 82 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAG 161 (312)
T ss_dssp CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHH
T ss_pred hhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceeec
Confidence 9876432111111 22444455555555556778899999999999999
Q ss_pred CCcCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc--eEEEe-CCCcCHHHHHHHHHHh
Q 025065 134 PFFQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG--RYLLA-GSVAQHSDILKFLREH 205 (258)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~--~~~~~-~~~~t~~e~~~~i~~~ 205 (258)
+......... ......+. ..++ +.++|+|++|+|++++.++.++...+ .|+.+ ++.+|+.|+++.+.+.
T Consensus 162 ~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 238 (312)
T d1qyda_ 162 YFAGSLAQLD---GHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERL 238 (312)
T ss_dssp HHTTTSSCTT---CCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHH
T ss_pred CCccchhhHH---HHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHH
Confidence 7654322111 01111222 3333 78999999999999999999887554 45444 6789999999999998
Q ss_pred CCC
Q 025065 206 YPT 208 (258)
Q Consensus 206 ~~~ 208 (258)
+|.
T Consensus 239 ~g~ 241 (312)
T d1qyda_ 239 SEQ 241 (312)
T ss_dssp HTC
T ss_pred HCC
Confidence 864
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.94 E-value=2.2e-28 Score=198.63 Aligned_cols=197 Identities=16% Similarity=0.215 Sum_probs=142.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-h---hhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-E---HLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
++|||||||||||||++|+++|+++||+|++++|++..... . .+..+. ..+++++.+|+.+.+.+.+.+.+++.
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNVDV 79 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhhhcee
Confidence 46899999999999999999999999999999998765432 1 111111 35689999999999999999999999
Q ss_pred EEecCCCCCCCCCCch---------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccccCC
Q 025065 83 VFHTASPVIFLSDNPQ---------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIGPF 135 (258)
Q Consensus 83 Vih~a~~~~~~~~~~~---------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~ 135 (258)
|+|+++.......... ..+...+.........+..+.+++++++||+.+||+.
T Consensus 80 vi~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~ 159 (307)
T d1qyca_ 80 VISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYF 159 (307)
T ss_dssp EEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHH
T ss_pred eeecccccccchhhHHHHHHHHhccccceeeeccccccccccccccccccccccccccchhhccCCCceecccceecCCC
Confidence 9999876422111110 2333444444444444566779999999999999986
Q ss_pred cCCCCCccHHHHHHHHcCC--CCCC---CCcceeeHHHHHHHHHHhhcCCCCCc--eEEE-eCCCcCHHHHHHHHHHhCC
Q 025065 136 FQPILNFGAEVILNLINGD--QSFA---FPYIFVEIRDVVYAHIRALEVPKASG--RYLL-AGSVAQHSDILKFLREHYP 207 (258)
Q Consensus 136 ~~~~~~~~~~~~~~~~~g~--~~~~---~~~~~i~v~D~a~~~~~~~~~~~~~~--~~~~-~~~~~t~~e~~~~i~~~~~ 207 (258)
...... .+.....+. ..++ +.++|+|++|+|++++.+++++...+ .|+. +++.+|+.|+++.+.+.+|
T Consensus 160 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G 235 (307)
T d1qyca_ 160 LRSLAQ----AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 235 (307)
T ss_dssp TTTTTC----TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTT
T ss_pred ccchhh----hhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHC
Confidence 543211 111222333 2222 78999999999999999999886554 5654 5789999999999999998
Q ss_pred CC
Q 025065 208 TL 209 (258)
Q Consensus 208 ~~ 209 (258)
..
T Consensus 236 ~~ 237 (307)
T d1qyca_ 236 KT 237 (307)
T ss_dssp SC
T ss_pred CC
Confidence 54
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.1e-25 Score=171.56 Aligned_cols=162 Identities=20% Similarity=0.233 Sum_probs=123.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
|.||||+||||||+||++++++|+++||+|++++|++++.... ...+++++.+|++|.+++.++++++|+|||
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-------~~~~~~~~~gD~~d~~~l~~al~~~d~vi~ 73 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------GPRPAHVVVGDVLQAADVDKTVAGQDAVIV 73 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------SCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-------cccccccccccccchhhHHHHhcCCCEEEE
Confidence 4678999999999999999999999999999999987553221 125689999999999999999999999999
Q ss_pred cCCCCCCCCCCch---------------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 86 TASPVIFLSDNPQ---------------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 86 ~a~~~~~~~~~~~---------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
+++.......... ..|...|..+|+.+ ++.++++|++
T Consensus 74 ~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l----~~~~~~~tii 149 (205)
T d1hdoa_ 74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVL----RESGLKYVAV 149 (205)
T ss_dssp CCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHH----HHTCSEEEEE
T ss_pred EeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHH----HhcCCceEEE
Confidence 9987533211111 36788888888774 4679999999
Q ss_pred cCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEe
Q 025065 127 HPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-RYLLA 189 (258)
Q Consensus 127 Rp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~ 189 (258)
||+.+++......... ...+. ....+++++|+|++++.++++++..| .+..+
T Consensus 150 rp~~~~~~~~~~~~~~-------~~~~~----~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s 202 (205)
T d1hdoa_ 150 MPPHIGDQPLTGAYTV-------TLDGR----GPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS 202 (205)
T ss_dssp CCSEEECCCCCSCCEE-------ESSSC----SSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred ecceecCCCCcccEEE-------eeCCC----CCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence 9999987543221100 01111 55679999999999999999988666 44443
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=9.8e-26 Score=176.68 Aligned_cols=171 Identities=19% Similarity=0.127 Sum_probs=126.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|++|+|||||||||||++|+++|+++|+ +|++++|++....... ...+....+|+.+.+++.+++.++|+|
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-------~~~i~~~~~D~~~~~~~~~~~~~~d~v 84 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDVG 84 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-------cceeeeeeecccccccccccccccccc
Confidence 4668999999999999999999999984 8999999875543222 245788889999999999999999999
Q ss_pred EecCCCCCCCCCCc--h-----------------------------------hhHHHHHHHHHHHHHHHHHHcCC-cEEE
Q 025065 84 FHTASPVIFLSDNP--Q-----------------------------------EWYSLAKTLAEEAAWKFAKENGI-DLVA 125 (258)
Q Consensus 84 ih~a~~~~~~~~~~--~-----------------------------------~~Y~~sK~~~e~~~~~~~~~~~~-~~~i 125 (258)
+|+++......... . +.|+.+|..+|+.+. +.+. +++|
T Consensus 85 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~~Y~~~K~~~E~~l~----~~~~~~~~I 160 (232)
T d2bkaa1 85 FCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVE----ELKFDRYSV 160 (232)
T ss_dssp EECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHH----TTCCSEEEE
T ss_pred cccccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCccchhHHHHHHhhhccc----cccccceEE
Confidence 99998742211100 0 689999999998854 3466 4899
Q ss_pred EcCCccccCCcCCCCCccHHHHHHHHcCCCCCC-CCcceeeHHHHHHHHHHhhcCCCCCceEEEeC
Q 025065 126 IHPGTVIGPFFQPILNFGAEVILNLINGDQSFA-FPYIFVEIRDVVYAHIRALEVPKASGRYLLAG 190 (258)
Q Consensus 126 lRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ 190 (258)
+||+.+||+.+... ....+........+ .+ .....++++|+|++++.++.++...+.+++++
T Consensus 161 lRP~~i~G~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~~ 223 (232)
T d2bkaa1 161 FRPGVLLCDRQESR--PGEWLVRKFFGSLP-DSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN 223 (232)
T ss_dssp EECCEEECTTGGGS--HHHHHHHHHHCSCC-TTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred ecCceeecCCCcCc--HHHHHHHHHhhccC-CcccCCCeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence 99999999976532 12222333332211 11 34568999999999999998887777776653
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.93 E-value=4.2e-26 Score=179.47 Aligned_cols=179 Identities=20% Similarity=0.202 Sum_probs=127.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCE--EEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYT--VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+|++|||||||||||++++++|+++|++ |+++.|+++.. ..+ ..+++++.+|+++.+.+.++++++|+||
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~-----~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi 73 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-----EKI---GGEADVFIGDITDADSINPAFQGIDALV 73 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH-----HHT---TCCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH-----Hhc---cCCcEEEEeeeccccccccccccceeeE
Confidence 4689999999999999999999999975 55566654321 111 2467899999999999999999999999
Q ss_pred ecCCCCCCCC--CCch----------------------------------------------------------hhHHHH
Q 025065 85 HTASPVIFLS--DNPQ----------------------------------------------------------EWYSLA 104 (258)
Q Consensus 85 h~a~~~~~~~--~~~~----------------------------------------------------------~~Y~~s 104 (258)
|+++...... ..+. ..|...
T Consensus 74 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 153 (252)
T d2q46a1 74 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVW 153 (252)
T ss_dssp ECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHH
T ss_pred EEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhh
Confidence 9998743211 0000 223333
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCC-CCcceeeHHHHHHHHHHhhcCCCC
Q 025065 105 KTLAEEAAWKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFA-FPYIFVEIRDVVYAHIRALEVPKA 182 (258)
Q Consensus 105 K~~~e~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~i~v~D~a~~~~~~~~~~~~ 182 (258)
+.+ ...+..+.+++++++||+++||+...... ...+. .... ...+++|++|+|++++.+++++..
T Consensus 154 ~~~----~~~~~~~~~~~~~ilRp~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~ 220 (252)
T d2q46a1 154 KRK----AEQYLADSGTPYTIIRAGGLLDKEGGVRE---------LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEA 220 (252)
T ss_dssp HHH----HHHHHHHSSSCEEEEEECEEECSCTTSSC---------EEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGG
T ss_pred hhh----hhhhhhcccccceeecceEEECCCcchhh---------hhhccCcccccCCCCeEEHHHHHHHHHHHhCCccc
Confidence 333 34446678999999999999999754321 01111 1122 567899999999999999999887
Q ss_pred Cc-eE-EEeC---CCcCHHHHHHHHHHhC
Q 025065 183 SG-RY-LLAG---SVAQHSDILKFLREHY 206 (258)
Q Consensus 183 ~~-~~-~~~~---~~~t~~e~~~~i~~~~ 206 (258)
.| +| ++++ ...++.|+.+.+.+..
T Consensus 221 ~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 221 KNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp TTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred cCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 66 78 5543 2456778877776554
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=7.9e-23 Score=157.74 Aligned_cols=156 Identities=21% Similarity=0.210 Sum_probs=102.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-CCCcEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-DGCDGVF 84 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~Vi 84 (258)
.|||||||||||||++|+++|+++|+ +|+++.|++.... +.+.. +..+..++.+.+ ..+|+||
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~-----------~~~~~---~~~d~~~~~~~~~~~~d~vi 67 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH-----------PRLDN---PVGPLAELLPQLDGSIDTAF 67 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC-----------TTEEC---CBSCHHHHGGGCCSCCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc-----------ccccc---cccchhhhhhccccchheee
Confidence 58999999999999999999999997 6777776653321 22333 333333333333 4589999
Q ss_pred ecCCCCCCCCCCch--------------------------------------hhHHHHHHHHHHHHHHHHHHcCC-cEEE
Q 025065 85 HTASPVIFLSDNPQ--------------------------------------EWYSLAKTLAEEAAWKFAKENGI-DLVA 125 (258)
Q Consensus 85 h~a~~~~~~~~~~~--------------------------------------~~Y~~sK~~~e~~~~~~~~~~~~-~~~i 125 (258)
|++|.......... +.|+.+|..+|+.++ +.+. +++|
T Consensus 68 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~~y~~~K~~~E~~l~----~~~~~~~~I 143 (212)
T d2a35a1 68 CCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQ----EQGWPQLTI 143 (212)
T ss_dssp ECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHT----TSCCSEEEE
T ss_pred eeeeeeccccccccccccchhhhhhhcccccccccccccccccccccccccccchhHHHHHHhhhcc----cccccccee
Confidence 99887522111111 789999999998854 4455 5999
Q ss_pred EcCCccccCCcCCCCCccHHHHHHHHcCC--CCCCCCcceeeHHHHHHHHHHhhcCCCCCceEEE
Q 025065 126 IHPGTVIGPFFQPILNFGAEVILNLINGD--QSFAFPYIFVEIRDVVYAHIRALEVPKASGRYLL 188 (258)
Q Consensus 126 lRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~ 188 (258)
+||+.|||+.+..... ...... +.++..++++|++|+|++++.+++++..+..|+.
T Consensus 144 ~Rp~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~g~~~~~ 201 (212)
T d2a35a1 144 ARPSLLFGPREEFRLA-------EILAAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFVE 201 (212)
T ss_dssp EECCSEESTTSCEEGG-------GGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCSEEEEEE
T ss_pred eCCcceeCCcccccHH-------HHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCCCCEEEE
Confidence 9999999997653211 011111 1122445679999999999999988754333443
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.87 E-value=5.2e-22 Score=164.43 Aligned_cols=192 Identities=17% Similarity=0.155 Sum_probs=136.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc-HHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS-FDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~Vih 85 (258)
++|+|+|||||||||++|+++|+++||+|+++.|+++......+.. .++++.+++|++|..+ +..++.++|++++
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~----~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~ 77 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA----IPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 77 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT----STTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcc----cCCCEEEEeeCCCcHHHHHHHhcCCceEEe
Confidence 4689999999999999999999999999999999876654333222 2579999999999654 6678888998887
Q ss_pred cCCCCCCCCCCch--------------------------------hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 86 TASPVIFLSDNPQ--------------------------------EWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 86 ~a~~~~~~~~~~~--------------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
............. .+|..+|...|+. ..+.+++++++||+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~vr~~~~~~ 153 (350)
T d1xgka_ 78 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENY----VRQLGLPSTFVYAGIYNN 153 (350)
T ss_dssp CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHH----HHTSSSCEEEEEECEEGG
T ss_pred ecccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHH----HHhhccCceeeeeceeec
Confidence 6543211100000 4677788877766 556689999999999987
Q ss_pred CCcCCCCCccHHHHHHHHcCC-----CCCC-CCcceeeH-HHHHHHHHHhhcCCC--CCc-eEEEeCCCcCHHHHHHHHH
Q 025065 134 PFFQPILNFGAEVILNLINGD-----QSFA-FPYIFVEI-RDVVYAHIRALEVPK--ASG-RYLLAGSVAQHSDILKFLR 203 (258)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~g~-----~~~~-~~~~~i~v-~D~a~~~~~~~~~~~--~~~-~~~~~~~~~t~~e~~~~i~ 203 (258)
+.......... ......+. +..+ ..++++++ +|+++++..++..+. ..| +|+++++.+|+.|+++.+.
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~ 231 (350)
T d1xgka_ 154 NFTSLPYPLFQ--MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFS 231 (350)
T ss_dssp GCBSSSCSSCB--EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHH
T ss_pred ccccccccccc--ccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCCcCCHHHHHHHHH
Confidence 65433221100 00111222 1112 56778876 799999999987642 245 7788888999999999999
Q ss_pred HhCCC
Q 025065 204 EHYPT 208 (258)
Q Consensus 204 ~~~~~ 208 (258)
+.+|.
T Consensus 232 ~~~G~ 236 (350)
T d1xgka_ 232 RALNR 236 (350)
T ss_dssp HHHTS
T ss_pred HHHCC
Confidence 99875
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=7.9e-19 Score=137.65 Aligned_cols=179 Identities=20% Similarity=0.123 Sum_probs=130.2
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|...+++|++|||||++.||++++++|+++|++|++.+|+.++. +++.....++..+.+|++|+++++++++
T Consensus 1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g 75 (244)
T d1pr9a_ 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL-----DSLVRECPGIEPVCVDLGDWEATERALGSVG 75 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHHHSTTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH-----HHHHHhcCCCeEEEEeCCCHHHHHHHHHHhC
Confidence 55557899999999999999999999999999999999875332 2222223468899999999999998886
Q ss_pred CCcEEEecCCCCCCCCCC---ch------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDN---PQ------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~---~~------------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+|+........ .. ..|+.+|..
T Consensus 76 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaa 155 (244)
T d1pr9a_ 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGA 155 (244)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHH
Confidence 489999999985432211 11 689999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KA 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 182 (258)
.+.+.+.++.+ +|+++..+.||.|..+....... ............ +...+..++|+|.++..++... ..
T Consensus 156 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~----pl~R~~~peevA~~v~fL~S~~a~~i 230 (244)
T d1pr9a_ 156 LDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNRI----PLGKFAEVEHVVNAILFLLSDRSGMT 230 (244)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSC-SHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhcc-ChHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhCCc
Confidence 99999998876 48999999999998764322211 122233333322 2234778999999999998643 34
Q ss_pred Cce-EEEeC
Q 025065 183 SGR-YLLAG 190 (258)
Q Consensus 183 ~~~-~~~~~ 190 (258)
.|. ..++|
T Consensus 231 tG~~i~vDG 239 (244)
T d1pr9a_ 231 TGSTLPVEG 239 (244)
T ss_dssp CSCEEEEST
T ss_pred CCcEEEECc
Confidence 664 34544
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.79 E-value=6.8e-19 Score=139.29 Aligned_cols=182 Identities=17% Similarity=0.106 Sum_probs=129.1
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
.++++|++|||||++.||++++++|.++|++|++.+|+.++......+++...+.++..+++|++++++++++++
T Consensus 3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (261)
T d1geea_ 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999976433222223333334578899999999988887664
Q ss_pred --CCcEEEecCCCCCCCCCC---ch------------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSDN---PQ------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~~---~~------------------------------------------------~~Y~~sK 105 (258)
++|++||+||........ .. ..|+.+|
T Consensus 83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asK 162 (261)
T d1geea_ 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK 162 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCC
Confidence 589999999986432211 11 6899999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
...+.+.+.++.+ +|+++..+.||.|..+...... ........+.... ....+..++|+|++++.++...
T Consensus 163 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~----pl~R~~~pediA~~v~fL~S~~s~ 237 (261)
T d1geea_ 163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMI----PMGYIGEPEEIAAVAAWLASSEAS 237 (261)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTC----TTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred ccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhc-CCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCchhc
Confidence 9999999988876 4899999999999766422110 0111222222211 2234678999999999998643
Q ss_pred CCCc-eEEEeC
Q 025065 181 KASG-RYLLAG 190 (258)
Q Consensus 181 ~~~~-~~~~~~ 190 (258)
...| .+.++|
T Consensus 238 ~itG~~i~vDG 248 (261)
T d1geea_ 238 YVTGITLFADG 248 (261)
T ss_dssp TCCSCEEEEST
T ss_pred CCcCCeEEECC
Confidence 3466 445544
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.79 E-value=1.7e-18 Score=139.73 Aligned_cols=185 Identities=15% Similarity=0.091 Sum_probs=128.2
Q ss_pred CCCC-CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccc-cCcCCcEEEEEccCCCcccHHHHhC
Q 025065 1 MMSG-EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 1 mm~~-~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
||.. .+++|++|||||+|.||++++++|+++|++|++.+|+..+... ...++ ...+..+..+++|+++.+.+++++.
T Consensus 17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~-~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~ 95 (294)
T d1w6ua_ 17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKA-TAEQISSQTGNKVHAIQCDVRDPDMVQNTVS 95 (294)
T ss_dssp CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHH-HHHHHHHhcCCceEEEEecccChHHHHHHhh
Confidence 4433 5688999999999999999999999999999999998654322 11111 1124568899999999988876553
Q ss_pred -------CCcEEEecCCCCCCCCCCch---------------------------------------------------hh
Q 025065 79 -------GCDGVFHTASPVIFLSDNPQ---------------------------------------------------EW 100 (258)
Q Consensus 79 -------~~d~Vih~a~~~~~~~~~~~---------------------------------------------------~~ 100 (258)
++|++||+|+.......... ..
T Consensus 96 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~ 175 (294)
T d1w6ua_ 96 ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP 175 (294)
T ss_dssp HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHH
T ss_pred hhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccch
Confidence 58999999998543221111 57
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 101 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
|+.+|...+.+++.++.+ +|+++..+.||.|-.+.................... ....+..++|+|.++..++
T Consensus 176 YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~----pl~R~~~pediA~~v~fL~ 251 (294)
T d1w6ua_ 176 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI----PCGRLGTVEELANLAAFLC 251 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC----TTSSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcC----CCCCCCCHHHHHHHHHHHh
Confidence 999999999999988866 489999999999987643322221222233333322 2334778999999999999
Q ss_pred cCC--CCCce-EEEeC
Q 025065 178 EVP--KASGR-YLLAG 190 (258)
Q Consensus 178 ~~~--~~~~~-~~~~~ 190 (258)
... ...|. ..++|
T Consensus 252 sd~s~~itG~~i~vDG 267 (294)
T d1w6ua_ 252 SDYASWINGAVIKFDG 267 (294)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CchhcCCCCcEEEECC
Confidence 653 35674 34544
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.79 E-value=4e-18 Score=133.39 Aligned_cols=172 Identities=17% Similarity=0.124 Sum_probs=125.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||++.||++++++|.++|++|++.+|+.++... ..+. -+..++++|++++++++++++
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~-~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 76 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLRE-AAEA-----VGAHPVVMDVADPASVERGFAEALAHLG 76 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHT-----TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHH-----cCCeEEEEecCCHHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999999987543221 1111 256789999999998887664
Q ss_pred CCcEEEecCCCCCCCCCCch-------------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNPQ-------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~~-------------------------------------------------~~Y~~sK~~~e 109 (258)
++|++||+||.......... ..|+.+|...+
T Consensus 77 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~~~Y~asKaal~ 156 (242)
T d1ulsa_ 77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVV 156 (242)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHHHH
T ss_pred CceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCCcchHHHHHHHH
Confidence 58999999998643221111 78999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 184 (258)
.+.+.++.+ +|+++..+.||.+-.+..... ............ +...+..++|+|.++..++... ...|
T Consensus 157 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~----pl~R~~~pedia~~v~fL~S~~s~~itG 229 (242)
T d1ulsa_ 157 GLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---PEKVREKAIAAT----PLGRAGKPLEVAYAALFLLSDESSFITG 229 (242)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTC----TTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC---CHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhchhhCCCCC
Confidence 999988876 489999999999977653322 122233333322 2334778999999999998643 3466
Q ss_pred eE-EEeC
Q 025065 185 RY-LLAG 190 (258)
Q Consensus 185 ~~-~~~~ 190 (258)
.. .++|
T Consensus 230 ~~i~vDG 236 (242)
T d1ulsa_ 230 QVLFVDG 236 (242)
T ss_dssp CEEEEST
T ss_pred cEEEECC
Confidence 44 4443
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.78 E-value=1.2e-18 Score=138.11 Aligned_cols=183 Identities=14% Similarity=0.144 Sum_probs=130.1
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
|++++++|++|||||++.||++++++|+++|++|++.+|+..+......+.....+.++.++++|+++++++.++++
T Consensus 3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (260)
T d1h5qa_ 3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 82 (260)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence 34456899999999999999999999999999999999987664321111111124578999999999998887764
Q ss_pred ----CCcEEEecCCCCCCCCCC---ch-----------------------------------------------------
Q 025065 79 ----GCDGVFHTASPVIFLSDN---PQ----------------------------------------------------- 98 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~~~---~~----------------------------------------------------- 98 (258)
++|++||+|+........ ..
T Consensus 83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~ 162 (260)
T d1h5qa_ 83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL 162 (260)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCc
Confidence 589999999985432111 11
Q ss_pred --hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHH
Q 025065 99 --EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAH 173 (258)
Q Consensus 99 --~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~ 173 (258)
..|+.+|...+.+.+.++.+ +|+++..+.||.|-.+..... ............ +...+..++|+|.++
T Consensus 163 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~----pl~R~g~pedvA~~v 235 (260)
T d1h5qa_ 163 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNI----PLNRFAQPEEMTGQA 235 (260)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTC----TTSSCBCGGGGHHHH
T ss_pred cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc---CHHHHHHHHhcC----CCCCCcCHHHHHHHH
Confidence 35999999999999988865 589999999999976543321 122333333322 223477899999999
Q ss_pred HHhhcCC--CCCce-EEEeCC
Q 025065 174 IRALEVP--KASGR-YLLAGS 191 (258)
Q Consensus 174 ~~~~~~~--~~~~~-~~~~~~ 191 (258)
+.++... ...|. ..++|.
T Consensus 236 ~fL~S~~s~~itG~~i~VDGG 256 (260)
T d1h5qa_ 236 ILLLSDHATYMTGGEYFIDGG 256 (260)
T ss_dssp HHHHSGGGTTCCSCEEEECTT
T ss_pred HHHhcchhCCCcCceEEECCC
Confidence 9998543 34664 455543
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.77 E-value=2.9e-18 Score=134.14 Aligned_cols=176 Identities=21% Similarity=0.147 Sum_probs=126.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---CCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---GCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~ 82 (258)
+++|++|||||++.||++++++|.++|++|++.+|+.++.. ++.....++..+.+|++++++++++++ ++|+
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi 77 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV-----SLAKECPGIEPVCVDLGDWDATEKALGGIGPVDL 77 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-----HHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-----HHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeE
Confidence 57899999999999999999999999999999998753321 111123468899999999999998886 4899
Q ss_pred EEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHHHHHHH
Q 025065 83 VFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 83 Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~~~e~~ 111 (258)
+||+||....... ... ..|+.+|...+.+
T Consensus 78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~l 157 (242)
T d1cyda_ 78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTML 157 (242)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHH
Confidence 9999998543211 111 6899999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc-e
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG-R 185 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~ 185 (258)
.+.++.+ +|+++..+-||.+..+..... .........+.... +...+..++|+|+++..++... ...| .
T Consensus 158 t~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~----pl~R~~~peeva~~v~fL~S~~s~~itG~~ 232 (242)
T d1cyda_ 158 TKAMAMELGPHKIRVNSVNPTVVLTDMGKKV-SADPEFARKLKERH----PLRKFAEVEDVVNSILFLLSDRSASTSGGG 232 (242)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBTTHHHHHH-TCCHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSSE
T ss_pred HHHHHHHhCccCeecccCCCCCccCHHHHhh-cCCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhcCcCCce
Confidence 9998876 489999999999976532111 11122222222221 2334778999999999998643 3466 4
Q ss_pred EEEeCC
Q 025065 186 YLLAGS 191 (258)
Q Consensus 186 ~~~~~~ 191 (258)
..++|.
T Consensus 233 i~vDGG 238 (242)
T d1cyda_ 233 ILVDAG 238 (242)
T ss_dssp EEESTT
T ss_pred EEeCcc
Confidence 455543
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.77 E-value=2e-18 Score=135.87 Aligned_cols=180 Identities=16% Similarity=0.117 Sum_probs=127.1
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccc-cCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL-DGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
++++|++|||||++.||++++++|+++|++|.+.+|+.++... ...++ ...+.++.++++|++++++++++++
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~-~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASE-AAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 80 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999987654322 11111 1123568899999999988887664
Q ss_pred --CCcEEEecCCCCCCCCCCc---h------------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSDNP---Q------------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~~~---~------------------------------------------------~~Y~~sK 105 (258)
++|++||+||......... . ..|+.+|
T Consensus 81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asK 160 (251)
T d1vl8a_ 81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK 160 (251)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHH
Confidence 5899999999854322111 1 6799999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
...+.+.+.++.+ +|+++..+.||.+-.+....... .......+.... +...+..++|+|++++.++...
T Consensus 161 aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~----pl~R~~~pedvA~~v~fL~S~~a~ 235 (251)
T d1vl8a_ 161 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-DPEKLDYMLKRI----PLGRTGVPEDLKGVAVFLASEEAK 235 (251)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-CHHHHHHHHHTC----TTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccC-CHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCchhC
Confidence 9999999988876 48999999999997664321111 112223333222 2234668999999999988643
Q ss_pred CCCce-EEEeC
Q 025065 181 KASGR-YLLAG 190 (258)
Q Consensus 181 ~~~~~-~~~~~ 190 (258)
...|. ..++|
T Consensus 236 ~itG~~i~vDG 246 (251)
T d1vl8a_ 236 YVTGQIIFVDG 246 (251)
T ss_dssp TCCSCEEEEST
T ss_pred CCcCcEEEeCc
Confidence 34664 44444
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.77 E-value=9.1e-18 Score=132.08 Aligned_cols=177 Identities=19% Similarity=0.139 Sum_probs=127.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|.+|||||++.||++++++|.++|++|++.+|+.+... ....++...+.++..+++|+++++++.++++
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~-~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 86 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD-SVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 86 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHH-HHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999998654332 2222333334578999999999998887764
Q ss_pred CCcEEEecCCCCCCCCCCc---h-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNP---Q-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~---~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+|+......... . ..|+.+|...
T Consensus 87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal 166 (251)
T d2c07a1 87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV 166 (251)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHH
Confidence 5899999999864322111 1 7899999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KAS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 183 (258)
+.+.+.++.+ +|+++..+.||.+-.+..... .......+.... +...+..++|+|.++..++... ...
T Consensus 167 ~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---~~~~~~~~~~~~----pl~R~~~pedvA~~v~fL~S~~s~~it 239 (251)
T d2c07a1 167 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNI----PAGRMGTPEEVANLACFLSSDKSGYIN 239 (251)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTC----TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhCCCc
Confidence 9999998875 589999999999987643321 222333333322 2234778999999999998643 346
Q ss_pred ceE-EEeC
Q 025065 184 GRY-LLAG 190 (258)
Q Consensus 184 ~~~-~~~~ 190 (258)
|.. .++|
T Consensus 240 G~~i~vDG 247 (251)
T d2c07a1 240 GRVFVIDG 247 (251)
T ss_dssp SCEEEEST
T ss_pred CcEEEECC
Confidence 644 4444
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.77 E-value=3.6e-18 Score=133.15 Aligned_cols=167 Identities=15% Similarity=0.092 Sum_probs=122.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||++.||++++++|+++|++|++.+|+.... +++..+++|++|+++++++++
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 71 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------KGLFGVEVDVTDSDAVDRAFTAVEEHQ 71 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh------------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence 46889999999999999999999999999999999986553 346778999999988877654
Q ss_pred -CCcEEEecCCCCCCCC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||...... .... ..|+.+|..
T Consensus 72 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa 151 (237)
T d1uzma1 72 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAG 151 (237)
T ss_dssp SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHH
T ss_pred CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHH
Confidence 5899999999854321 1111 789999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KA 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 182 (258)
.+.+.+.++.+ +|+++..+.||.+..+..... .......... . . +...+..++|+|.++.+++... ..
T Consensus 152 l~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~-~--~-pl~R~~~pedvA~~v~fL~S~~s~~i 224 (237)
T d1uzma1 152 VIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQ-F--I-PAKRVGTPAEVAGVVSFLASEDASYI 224 (237)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGG-G--C-TTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc---CHHHHHHHHh-c--C-CCCCCcCHHHHHHHHHHHhCchhcCC
Confidence 99999988876 589999999999976532211 1111222221 1 1 2334778999999999998643 34
Q ss_pred CceE-EEeC
Q 025065 183 SGRY-LLAG 190 (258)
Q Consensus 183 ~~~~-~~~~ 190 (258)
.|.. .++|
T Consensus 225 tG~~i~vdG 233 (237)
T d1uzma1 225 SGAVIPVDG 233 (237)
T ss_dssp CSCEEEEST
T ss_pred cCCeEEECC
Confidence 6643 4443
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=4.5e-18 Score=134.11 Aligned_cols=181 Identities=14% Similarity=0.145 Sum_probs=130.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||++.||++++++|+++|++|++.+|+.++.. +...++...+.++.++++|++++++++++++
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g 87 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN-HVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999998754322 1222232334578999999999988877654
Q ss_pred CCcEEEecCCCCCCCCCCc-h------------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNP-Q------------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~-~------------------------------------------------~~Y~~sK~~~e 109 (258)
++|++||+||.......+. . ..|+.+|...+
T Consensus 88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~ 167 (255)
T d1fmca_ 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS 167 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHH
Confidence 5899999999864432211 1 78999999999
Q ss_pred HHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCc
Q 025065 110 EAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASG 184 (258)
Q Consensus 110 ~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~ 184 (258)
.+.+.++.+ +|+++..+-||.|..+...... .......+.... +...+..++|+|.++..++... ...|
T Consensus 168 ~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~--~~e~~~~~~~~~----pl~R~g~pedvA~~v~fL~S~~s~~itG 241 (255)
T d1fmca_ 168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHT----PIRRLGQPQDIANAALFLCSPAASWVSG 241 (255)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHHHHHHTC----SSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC--CHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 999988866 4899999999999765332211 122333333322 2234678999999999998643 3466
Q ss_pred -eEEEeCCCc
Q 025065 185 -RYLLAGSVA 193 (258)
Q Consensus 185 -~~~~~~~~~ 193 (258)
...++|..+
T Consensus 242 ~~i~vDGG~~ 251 (255)
T d1fmca_ 242 QILTVSGGGV 251 (255)
T ss_dssp CEEEESTTSC
T ss_pred CEEEECcCcc
Confidence 445665543
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.76 E-value=9.7e-18 Score=131.60 Aligned_cols=179 Identities=14% Similarity=0.105 Sum_probs=121.8
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||++.||++++++|.++|++|++.+|++.+.....++ ..+.++.++++|++++++++++++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 78 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR---NLGRRVLTVKCDVSQPGDVEAFGKQVISTF 78 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHH---HcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 36789999999999999999999999999999999876543222222 224678999999999998887654
Q ss_pred -CCcEEEecCCCCCCCCCC---ch-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDN---PQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~---~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||........ .. ..|+.+|..
T Consensus 79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 158 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAA 158 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhcc
Confidence 689999999986432211 11 689999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KA 182 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~ 182 (258)
.+.+.+.++.+ +|+++..+.||.+..+........ ..... .... .. ....+..++|+|++++.++... ..
T Consensus 159 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~-~~~~-~~-~l~r~~~pedvA~~v~fL~S~~s~~i 233 (247)
T d2ew8a1 159 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS--AMFDV-LPNM-LQ-AIPRLQVPLDLTGAAAFLASDDASFI 233 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CT-TS-SSCSCCCTHHHHHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc--hhHHH-HHHH-hc-cCCCCCCHHHHHHHHHHHhCchhcCC
Confidence 99999988875 489999999999976643221100 00011 1111 00 2224668899999999998643 34
Q ss_pred Cce-EEEeCC
Q 025065 183 SGR-YLLAGS 191 (258)
Q Consensus 183 ~~~-~~~~~~ 191 (258)
.|. ..++|.
T Consensus 234 tG~~i~vDGG 243 (247)
T d2ew8a1 234 TGQTLAVDGG 243 (247)
T ss_dssp CSCEEEESSS
T ss_pred cCCeEEECCC
Confidence 664 455443
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.76 E-value=2.2e-17 Score=131.25 Aligned_cols=181 Identities=15% Similarity=0.210 Sum_probs=128.0
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||++.||++++++|+++|++|++.+|+.+.... ...++.. ...+.++.+|++++++++++++
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~-~~~~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQK-VCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH 80 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHhcC-CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4688999999999999999999999999999999987543321 1222221 3457889999999998887764
Q ss_pred -CCcEEEecCCCCCCCC---C--Cch------------------------------------------------hhHHHH
Q 025065 79 -GCDGVFHTASPVIFLS---D--NPQ------------------------------------------------EWYSLA 104 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~---~--~~~------------------------------------------------~~Y~~s 104 (258)
++|++||+||...... . ... ..|+.+
T Consensus 81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as 160 (268)
T d2bgka1 81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT 160 (268)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence 5899999999753321 1 111 479999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
|...+.+++.++.+ +|+++..+.||.+-.+.................... . ....+..++|+|.+++.++...
T Consensus 161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~---~~gr~~~pedvA~~v~fL~S~~ 237 (268)
T d2bgka1 161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN---LKGTLLRAEDVADAVAYLAGDE 237 (268)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS---SCSCCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc---cCCCCcCHHHHHHHHHHHhChh
Confidence 99999999988866 589999999999988754433222222222221111 1 1223678999999999998643
Q ss_pred --CCCc-eEEEeC
Q 025065 181 --KASG-RYLLAG 190 (258)
Q Consensus 181 --~~~~-~~~~~~ 190 (258)
...| ...++|
T Consensus 238 s~~itGq~i~VDG 250 (268)
T d2bgka1 238 SKYVSGLNLVIDG 250 (268)
T ss_dssp GTTCCSCEEEEST
T ss_pred hCCccCceEEECc
Confidence 3566 445554
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.7e-17 Score=130.22 Aligned_cols=177 Identities=18% Similarity=0.183 Sum_probs=125.3
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||++.||++++++|+++|++|++.+|+.+.. +++.....+..++++|++++++++++++
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG-----RALEQELPGAVFILCDVTQEDDVKTLVSETIRRF 77 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence 36789999999999999999999999999999999875332 2222223568899999999998887764
Q ss_pred -CCcEEEecCCCCCC-CC-C--Cch----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIF-LS-D--NPQ----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~-~~-~--~~~----------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||.... .. . ... ..|+.+|..
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 157 (250)
T d1ydea1 78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGA 157 (250)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHhh
Confidence 58999999997432 11 1 111 689999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcC---CCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC-C
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ---PILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV-P 180 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~-~ 180 (258)
.+.+.+.++.+ +|+++..+.||.|-.+... .........+.+..... +...+..++|+|.+++.++.. .
T Consensus 158 l~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~----pl~R~g~p~eva~~v~fL~Sda~ 233 (250)
T d1ydea1 158 VTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ----PLGRMGQPAEVGAAAVFLASEAN 233 (250)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS----TTSSCBCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCccC
Confidence 99999998876 4899999999999654211 11111122233333222 233477999999999998853 2
Q ss_pred CCCc-eEEEeC
Q 025065 181 KASG-RYLLAG 190 (258)
Q Consensus 181 ~~~~-~~~~~~ 190 (258)
...| .+.++|
T Consensus 234 ~itG~~i~vDG 244 (250)
T d1ydea1 234 FCTGIELLVTG 244 (250)
T ss_dssp TCCSCEEEEST
T ss_pred CCcCCeEEECC
Confidence 3466 344443
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.76 E-value=1.3e-17 Score=131.73 Aligned_cols=180 Identities=18% Similarity=0.125 Sum_probs=125.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||++.||++++++|+++|++|++.+|++.+.. +..+++......+.++.+|+++.++++++++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~-~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~ 82 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD-ECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 82 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999999764322 2223333335678899999999988776543
Q ss_pred -CCcEEEecCCCCCCCCCCch--------------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~ 107 (258)
.+|+++|+|+.......... ..|+.+|..
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a 162 (258)
T d1ae1a_ 83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGA 162 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHH
Confidence 37999999998644222111 789999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC---ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC--
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN---FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV-- 179 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~-- 179 (258)
.+.+.+.++.+ +|+++..+.||.+..+....... .....+..+.... +...+...+|+|.+++.++..
T Consensus 163 l~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~----plgR~~~pediA~~v~fL~S~~s 238 (258)
T d1ae1a_ 163 INQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT----PMGRAGKPQEVSALIAFLCFPAA 238 (258)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS----TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhChhh
Confidence 99999998876 47999999999998764322111 1222333333221 233478999999999999954
Q ss_pred CCCCceE-EEeC
Q 025065 180 PKASGRY-LLAG 190 (258)
Q Consensus 180 ~~~~~~~-~~~~ 190 (258)
....|.. .++|
T Consensus 239 ~~itG~~i~vDG 250 (258)
T d1ae1a_ 239 SYITGQIIWADG 250 (258)
T ss_dssp TTCCSCEEEEST
T ss_pred CCCcCcEEEeCC
Confidence 3456744 4443
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.76 E-value=1.4e-17 Score=130.20 Aligned_cols=172 Identities=19% Similarity=0.161 Sum_probs=125.8
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
..+++|++|||||++.||++++++|+++|++|++.+|++++... ...++ ..+..++++|++++++++++++
T Consensus 2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (244)
T d1nffa_ 2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKA-MAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTA 77 (244)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh---hCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999997643321 11222 3568899999999988887664
Q ss_pred --CCcEEEecCCCCCCCCCCc---h-----------------------------------------------hhHHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSDNP---Q-----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~~~---~-----------------------------------------------~~Y~~sK~ 106 (258)
++|++||+||......... . ..|+.+|.
T Consensus 78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa 157 (244)
T d1nffa_ 78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF 157 (244)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHH
Confidence 5899999999864322111 1 68999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
..+.+.+.++.+ +|+++..+-||.+..+....... ..... ....+..++|+|+++++++... .
T Consensus 158 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-----------~~~~~-pl~R~~~p~diA~~v~fL~s~~s~~ 225 (244)
T d1nffa_ 158 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE-----------DIFQT-ALGRAAEPVEVSNLVVYLASDESSY 225 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT-----------TCSCC-SSSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH-----------HHHhc-cccCCCCHHHHHHHHHHHhChhhCC
Confidence 999999998876 48999999999997664221100 00111 2334789999999999998643 3
Q ss_pred CCc-eEEEeCC
Q 025065 182 ASG-RYLLAGS 191 (258)
Q Consensus 182 ~~~-~~~~~~~ 191 (258)
..| .+.++|.
T Consensus 226 itG~~i~vDGG 236 (244)
T d1nffa_ 226 STGAEFVVDGG 236 (244)
T ss_dssp CCSCEEEESTT
T ss_pred CcCCEEEECCC
Confidence 466 4455543
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.76 E-value=1e-17 Score=132.58 Aligned_cols=183 Identities=19% Similarity=0.157 Sum_probs=128.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
...+|++|||||++.||.+++++|+++|++|++.+++..+.......++...+.++..+++|+++++++++.++
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999877765443222222333334578999999999988887664
Q ss_pred -CCcEEEecCCCCCCCCCCch-------------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNPQ-------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~~-------------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||.......... ..|+.+|...
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~al 162 (259)
T d1ja9a_ 83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAV 162 (259)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHH
T ss_pred CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHHHH
Confidence 58999999998643221111 6899999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCc---------CCCCCccH-HHHHHHHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFF---------QPILNFGA-EVILNLINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~---------~~~~~~~~-~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
+.+++.++.+ +|+++..+.||.+-.+.. ........ .+...+.... +...+...+|+|++++.
T Consensus 163 ~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----pl~R~g~p~eVa~~v~f 238 (259)
T d1ja9a_ 163 EGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN----PLKRIGYPADIGRAVSA 238 (259)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS----TTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCC----CCCCCcCHHHHHHHHHH
Confidence 9999988876 489999999999865411 00111111 1222222222 23347899999999999
Q ss_pred hhcCCC--CCce-EEEeCC
Q 025065 176 ALEVPK--ASGR-YLLAGS 191 (258)
Q Consensus 176 ~~~~~~--~~~~-~~~~~~ 191 (258)
++.... ..|. ..++|.
T Consensus 239 L~S~~a~~itG~~i~vDGG 257 (259)
T d1ja9a_ 239 LCQEESEWINGQVIKLTGG 257 (259)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhCchhcCCcCceEEeCCC
Confidence 997643 4663 455554
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.75 E-value=3.7e-18 Score=134.98 Aligned_cols=182 Identities=17% Similarity=0.116 Sum_probs=124.2
Q ss_pred CCCCCCCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC
Q 025065 1 MMSGEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
||+..+++|++|||||+| .||++++++|+++|++|++.+|+...... ..+..........+++|++++++++++++
T Consensus 1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (256)
T d1ulua_ 1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE--AEKLAEALGGALLFRADVTQDEELDALFA 78 (256)
T ss_dssp CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH--HHHHHHHTTCCEEEECCTTCHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH--HHHhhhccCcccccccccCCHHHHHHHHH
Confidence 788888999999999998 79999999999999999888876432211 11111113456789999999988887764
Q ss_pred -------CCcEEEecCCCCCCC-------CCCch---------------------------------------------h
Q 025065 79 -------GCDGVFHTASPVIFL-------SDNPQ---------------------------------------------E 99 (258)
Q Consensus 79 -------~~d~Vih~a~~~~~~-------~~~~~---------------------------------------------~ 99 (258)
++|++||+|+..... ..... .
T Consensus 79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~ 158 (256)
T d1ulua_ 79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYN 158 (256)
T ss_dssp HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCH
T ss_pred HHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCch
Confidence 589999999974310 11111 6
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 100 WYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 100 ~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.|+.+|...+.+.+.++.+ +|+++..+.||.+..+...... ............. +...+..++|+|.++..+
T Consensus 159 ~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~-~~~~~~~~~~~~~----pl~R~~~pedvA~~v~fL 233 (256)
T d1ulua_ 159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTA----PLRRNITQEEVGNLGLFL 233 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHHHHS----TTSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh-hhHHHHHHHHhcC----CCCCCcCHHHHHHHHHHH
Confidence 8999999999999998876 4899999999999776433221 1122233322221 233477899999999999
Q ss_pred hcCC--CCCceE-EEe
Q 025065 177 LEVP--KASGRY-LLA 189 (258)
Q Consensus 177 ~~~~--~~~~~~-~~~ 189 (258)
+... ...|.. .++
T Consensus 234 ~S~~s~~itG~~i~VD 249 (256)
T d1ulua_ 234 LSPLASGITGEVVYVD 249 (256)
T ss_dssp HSGGGTTCCSCEEEES
T ss_pred hCchhCCccCCeEEEC
Confidence 8653 346644 444
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=1.5e-17 Score=130.13 Aligned_cols=174 Identities=18% Similarity=0.120 Sum_probs=125.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|+++||||++.||++++++|+++|++|++.+|+.+.... ..+++ +.+...+++|++++++++++++
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~-~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA-ISDYL---GANGKGLMLNVTDPASIESVLEKIRAEFG 77 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHh---CCCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence 578999999999999999999999999999999987543221 11111 3467889999999988887664
Q ss_pred CCcEEEecCCCCCCCCCCc---h-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNP---Q-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~---~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+|+......... . ..|+.+|...
T Consensus 78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal 157 (243)
T d1q7ba_ 78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGL 157 (243)
T ss_dssp SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHH
Confidence 5899999999864322111 1 7899999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCC
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KAS 183 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 183 (258)
+.+.+.++.+ +|+++..+.||.+-.+..... .......+.... +...+..++|+|.++.+++... ...
T Consensus 158 ~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~----pl~R~~~pedvA~~v~fL~S~~s~~it 230 (243)
T d1q7ba_ 158 IGFSKSLAREVASRGITVNVVAPGFIETDMTRAL---SDDQRAGILAQV----PAGRLGGAQEIANAVAFLASDEAAYIT 230 (243)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTC----TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHhCccCeEEEEEecceEechhhhhh---hhhHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCchhcCCc
Confidence 9999998876 589999999999876532221 111222222221 2334778999999999998643 346
Q ss_pred ce-EEEeC
Q 025065 184 GR-YLLAG 190 (258)
Q Consensus 184 ~~-~~~~~ 190 (258)
|. ..++|
T Consensus 231 Gq~i~vdG 238 (243)
T d1q7ba_ 231 GETLHVNG 238 (243)
T ss_dssp SCEEEEST
T ss_pred CCeEEECC
Confidence 63 45544
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.75 E-value=1.7e-17 Score=129.71 Aligned_cols=174 Identities=16% Similarity=0.107 Sum_probs=127.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||++.||++++++|.++|++|++.+|+..+... .......++.++++|++++++++++++
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g 78 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAE----AVAALEAEAIAVVADVSDPKAVEAVFAEALEEFG 78 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999999999987643321 112224678899999999998877654
Q ss_pred CCcEEEecCCCCCCCCCCch-----------------------------------------------hhHHHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNPQ-----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~~-----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
++|++||+|+.......... ..|+.+|...|.+
T Consensus 79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~~~Y~~sK~al~~l 158 (241)
T d2a4ka1 79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGL 158 (241)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHHHH
T ss_pred CccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCccccchhhHHHHHH
Confidence 58999999988543221111 6899999999999
Q ss_pred HHHHHHHc---CCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCceE
Q 025065 112 AWKFAKEN---GIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASGRY 186 (258)
Q Consensus 112 ~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~ 186 (258)
.+.++++. |+++.++.||.+-.+.... ..........+.. ....+..++|+|+++..++... ...|..
T Consensus 159 t~~lA~el~~~gIrvN~I~PG~v~T~~~~~---~~~~~~~~~~~~~----p~~r~~~p~dva~~v~fL~S~~s~~itG~~ 231 (241)
T d2a4ka1 159 ARTLALELARKGVRVNVLLPGLIQTPMTAG---LPPWAWEQEVGAS----PLGRAGRPEEVAQAALFLLSEESAYITGQA 231 (241)
T ss_dssp HHHHHHHHTTTTCEEEEEEECSBCCGGGTT---SCHHHHHHHHHTS----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHhHhCCEEeeeccCcCCCHHHHh---hhHhHHHHHHhCC----CCCCCcCHHHHHHHHHHHhcchhCCCcCce
Confidence 99998774 6999999999996654322 1223344443332 2234778999999999999643 356644
Q ss_pred -EEeC
Q 025065 187 -LLAG 190 (258)
Q Consensus 187 -~~~~ 190 (258)
.++|
T Consensus 232 i~vDG 236 (241)
T d2a4ka1 232 LYVDG 236 (241)
T ss_dssp EEEST
T ss_pred EEeCC
Confidence 4443
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.75 E-value=6.4e-18 Score=133.77 Aligned_cols=185 Identities=17% Similarity=0.072 Sum_probs=121.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhcccc-CcCCcEEEEEccCCCcccHHHHhC------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELD-GATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+++|++|||||++.||++++++|+++|++|++.+|+..+.......++. ..+.++.++++|++++++++++++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4579999999999999999999999999999999875332111111111 113578899999999998887764
Q ss_pred -CCcEEEecCCCCCCCCCCc---h-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNP---Q-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~---~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||......... . ..|+.+|..
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 161 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG 161 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhh
Confidence 5899999999864322111 1 689999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccH--HHHHHHHcCCCCCC---CCcceeeHHHHHHHHHHhhcC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGA--EVILNLINGDQSFA---FPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~--~~~~~~~~g~~~~~---~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+.+.+.++.+ +|+++..+.||.|-.+.......... ............+. +...+..++|+|.++++++..
T Consensus 162 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~ 241 (260)
T d1x1ta1 162 VVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASD 241 (260)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSG
T ss_pred HHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence 99999998876 48999999999997664221111000 00000000000000 234578899999999999864
Q ss_pred C--CCCceE-EEeC
Q 025065 180 P--KASGRY-LLAG 190 (258)
Q Consensus 180 ~--~~~~~~-~~~~ 190 (258)
. ...|.. .++|
T Consensus 242 ~a~~itG~~i~vDG 255 (260)
T d1x1ta1 242 AAAQITGTTVSVDG 255 (260)
T ss_dssp GGTTCCSCEEEEST
T ss_pred hhCCCcCCEEEECc
Confidence 3 356644 4444
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.74 E-value=5.1e-17 Score=128.20 Aligned_cols=180 Identities=17% Similarity=0.138 Sum_probs=125.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||++.||++++++|+++|++|++.+|+.+.... ..+.. .....++..+++|++++++++++++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~-~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE-TAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-hCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999997644322 11111 1123468899999999998887654
Q ss_pred --CCcEEEecCCCCCC-C-CC--Cch-----------------------------------------------hhHHHHH
Q 025065 79 --GCDGVFHTASPVIF-L-SD--NPQ-----------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 --~~d~Vih~a~~~~~-~-~~--~~~-----------------------------------------------~~Y~~sK 105 (258)
++|++||+||.... . .. ... ..|+.+|
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 160 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK 160 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHH
Confidence 58999999997532 1 11 111 7899999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCC-----CCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI-----LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
...+.+.+.++.+ +|+++..+.||.+..+..... ..........+.... +...+..++|+|.+++.++
T Consensus 161 aal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~----pl~R~~~p~dvA~~v~fL~ 236 (258)
T d1iy8a_ 161 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN----PSKRYGEAPEIAAVVAFLL 236 (258)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHh
Confidence 9999999988876 489999999999976531100 011112222222222 2334778999999999998
Q ss_pred cCC--CCCce-EEEeC
Q 025065 178 EVP--KASGR-YLLAG 190 (258)
Q Consensus 178 ~~~--~~~~~-~~~~~ 190 (258)
... ...|. ..++|
T Consensus 237 S~~s~~itG~~i~VDG 252 (258)
T d1iy8a_ 237 SDDASYVNATVVPIDG 252 (258)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CchhcCCcCceEEcCc
Confidence 643 34664 34443
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.73 E-value=5.1e-17 Score=128.44 Aligned_cols=174 Identities=17% Similarity=0.088 Sum_probs=123.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||++.||+++++.|+++|++|++.+|+.+... ....++...+.++..+++|++++++++++++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALE-KAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999998754332 2222333335678999999999988887664
Q ss_pred CCcEEEecCCCCCC-CC---CCch-----------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIF-LS---DNPQ-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~-~~---~~~~-----------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||.... .. .... ..|+.+|..
T Consensus 82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 161 (260)
T d1zema1 82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGA 161 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHH
Confidence 58999999997532 11 1111 689999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcC------------CCCCccHH-HHHHHHcCCCCCCCCcceeeHHHHHH
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ------------PILNFGAE-VILNLINGDQSFAFPYIFVEIRDVVY 171 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~------------~~~~~~~~-~~~~~~~g~~~~~~~~~~i~v~D~a~ 171 (258)
.+.+.+.++.+ +|+++..+.||.|-.+... ......+. ....+.... +...+..++|+|.
T Consensus 162 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----Pl~R~g~pedvA~ 237 (260)
T d1zema1 162 IIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV----PMRRYGDINEIPG 237 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS----TTSSCBCGGGSHH
T ss_pred HHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC----CCCCCcCHHHHHH
Confidence 99999988876 4799999999999765311 00011111 222222221 2334678999999
Q ss_pred HHHHhhcCC--CCCc
Q 025065 172 AHIRALEVP--KASG 184 (258)
Q Consensus 172 ~~~~~~~~~--~~~~ 184 (258)
+++.++... ...|
T Consensus 238 ~v~fL~S~~s~~itG 252 (260)
T d1zema1 238 VVAFLLGDDSSFMTG 252 (260)
T ss_dssp HHHHHHSGGGTTCCS
T ss_pred HHHHHhCchhcCccC
Confidence 999998643 3456
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.73 E-value=4.2e-17 Score=128.22 Aligned_cols=178 Identities=16% Similarity=0.214 Sum_probs=124.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||++.||++++++|+++|++|++.+|+.+.... ..+.+. ...++.++++|++++++++++++
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEK-AAKSVG-TPDQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHhC-CCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3688999999999999999999999999999999987543321 112221 24578999999999988887654
Q ss_pred -CCcEEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~ 106 (258)
++|++||+|+....... ... ..|+.+|.
T Consensus 81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa 160 (251)
T d1zk4a1 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG 160 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence 58999999998643211 111 68999999
Q ss_pred HHHHHHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 107 LAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 107 ~~e~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
..+.+.+.++.+ +|+++..+.||.|..+....... ...... ..... +...+..++|+|.++++++...
T Consensus 161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~---~~~~~-pl~R~~~pedvA~~v~fL~S~~s 234 (251)
T d1zk4a1 161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMS---QRTKT-PMGHIGEPNDIAYICVYLASNES 234 (251)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHT---STTTC-TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC--HHHHHH---HHhCC-CCCCCcCHHHHHHHHHHHhCchh
Confidence 999988877653 48999999999997653222111 111111 11111 2234779999999999998643
Q ss_pred -CCCce-EEEeC
Q 025065 181 -KASGR-YLLAG 190 (258)
Q Consensus 181 -~~~~~-~~~~~ 190 (258)
...|. +.++|
T Consensus 235 ~~itG~~i~vDG 246 (251)
T d1zk4a1 235 KFATGSEFVVDG 246 (251)
T ss_dssp TTCCSCEEEEST
T ss_pred CCCcCcEEEECc
Confidence 34664 44444
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.73 E-value=2.6e-17 Score=129.98 Aligned_cols=181 Identities=15% Similarity=0.136 Sum_probs=127.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||++.||++++++|+++|++|++.+|+.++.. +...++.....++.++++|++++++++++++
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~-~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN-DCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 84 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999998754432 2222232334578899999999988776542
Q ss_pred -CCcEEEecCCCCCCCCCCc---h-----------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNP---Q-----------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~---~-----------------------------------------------~~Y~~sK~~ 107 (258)
.+|++||+||......... . ..|+.+|..
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 164 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGA 164 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHH
Confidence 3899999999854322111 1 789999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
.+.+.+.++.+ +|+++..+.||.|-.+....... .....+.++.... +...+..++|+|.+++.++...
T Consensus 165 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~----pl~R~g~pedvA~~v~fL~S~~s~ 240 (259)
T d2ae2a_ 165 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC----ALRRMGEPKELAAMVAFLCFPAAS 240 (259)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS----TTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhC
Confidence 99999999876 48999999999997653211111 1122233333322 2234778999999999998643
Q ss_pred CCCceE-EEeCC
Q 025065 181 KASGRY-LLAGS 191 (258)
Q Consensus 181 ~~~~~~-~~~~~ 191 (258)
...|.. .++|.
T Consensus 241 ~itG~~i~VDGG 252 (259)
T d2ae2a_ 241 YVTGQIIYVDGG 252 (259)
T ss_dssp TCCSCEEEESTT
T ss_pred CCcCcEEEECCC
Confidence 346643 45443
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=3.2e-17 Score=129.34 Aligned_cols=168 Identities=21% Similarity=0.197 Sum_probs=117.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||++.||+++++.|.++|++|++.+|+..+... ..+++.. ...++.++++|++++++++++++
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~-~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~ 86 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEE-LAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 86 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999987543222 1121211 23468899999999998887654
Q ss_pred --CCcEEEecCCCCCCCCCC---ch---------------------------------------------------hhHH
Q 025065 79 --GCDGVFHTASPVIFLSDN---PQ---------------------------------------------------EWYS 102 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~~---~~---------------------------------------------------~~Y~ 102 (258)
++|++||+|+........ .. ..|+
T Consensus 87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~ 166 (257)
T d1xg5a_ 87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS 166 (257)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHH
Confidence 589999999986432221 11 4599
Q ss_pred HHHHHHHHHHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 103 LAKTLAEEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
.+|...+.+++.++.+ +++++..+-||.+-.+................. ....+..++|+|++++.++
T Consensus 167 ~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~-------~~~r~~~pedvA~~v~fL~ 239 (257)
T d1xg5a_ 167 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY-------EQMKCLKPEDVAEAVIYVL 239 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH-------C---CBCHHHHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC-------CCCCCcCHHHHHHHHHHHh
Confidence 9999999999888754 579999999998754421111111111111111 2334789999999999998
Q ss_pred cCCC
Q 025065 178 EVPK 181 (258)
Q Consensus 178 ~~~~ 181 (258)
..+.
T Consensus 240 s~~a 243 (257)
T d1xg5a_ 240 STPA 243 (257)
T ss_dssp HSCT
T ss_pred CChh
Confidence 7753
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.73 E-value=5.3e-17 Score=127.30 Aligned_cols=174 Identities=16% Similarity=0.037 Sum_probs=121.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||++.||++++++|+++|++|.+.+|+.+.. +..+. .+..++++|++++++++++++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~--~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 75 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK--EVAEA-----IGGAFFQVDLEDERERVRFVEEAAYALG 75 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH--HHHHH-----HTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHH-----cCCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999976432 11222 245778999999988777654
Q ss_pred CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||....... ... ..|+.+|...
T Consensus 76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal 155 (248)
T d2d1ya1 76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGL 155 (248)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHH
T ss_pred CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHH
Confidence 58999999998643211 111 7899999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCCC---CCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP-- 180 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~-- 180 (258)
+.+.+.++.+ +|+++..+.||.+-.+..... ..........+.... ....+..++|+|.++..++...
T Consensus 156 ~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~----pl~R~~~pedia~~v~fL~S~~s~ 231 (248)
T d2d1ya1 156 VNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH----ALRRLGKPEEVAEAVLFLASEKAS 231 (248)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhc
Confidence 9999988876 489999999999865421100 000000111111111 2334778999999999998643
Q ss_pred CCCc-eEEEeC
Q 025065 181 KASG-RYLLAG 190 (258)
Q Consensus 181 ~~~~-~~~~~~ 190 (258)
...| .+.++|
T Consensus 232 ~itG~~i~vDG 242 (248)
T d2d1ya1 232 FITGAILPVDG 242 (248)
T ss_dssp TCCSCEEEEST
T ss_pred CCCCcEEEcCc
Confidence 3466 445544
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.73 E-value=5.1e-17 Score=128.15 Aligned_cols=178 Identities=15% Similarity=0.093 Sum_probs=125.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||++.||++++++|+++|++|++.+|+.+.... ...++ +.++.++++|++++++++++++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~-~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 78 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARA-TAAEI---GPAACAIALDVTDQASIDRCVAELLDRWG 78 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHH-HHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999999987543221 11222 4678999999999998887764
Q ss_pred CCcEEEecCCCCCCCCCCch---------------------------------------------------hhHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNPQ---------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~~---------------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||.......... ..|+.+|..
T Consensus 79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa 158 (256)
T d1k2wa_ 79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAA 158 (256)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhH
Confidence 58999999998643221111 689999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.+.+.+.++.+ +|+++..+.||.+-.+....... ........+.... +...+..++|+|.+++.+
T Consensus 159 l~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----PlgR~~~p~evA~~v~fL 234 (256)
T d1k2wa_ 159 VISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAV----PFGRMGRAEDLTGMAIFL 234 (256)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHS----TTSSCBCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcC----CCCCCcCHHHHHHHHHHH
Confidence 99999988865 48999999999887653211000 0000111111111 233477899999999998
Q ss_pred hcCC--CCCc-eEEEeCC
Q 025065 177 LEVP--KASG-RYLLAGS 191 (258)
Q Consensus 177 ~~~~--~~~~-~~~~~~~ 191 (258)
+... ...| ...++|.
T Consensus 235 ~S~~a~~iTG~~i~vDGG 252 (256)
T d1k2wa_ 235 ATPEADYIVAQTYNVDGG 252 (256)
T ss_dssp TSGGGTTCCSCEEEESTT
T ss_pred hCchhCCccCceEEECcc
Confidence 8543 3466 4455543
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.73 E-value=7.7e-17 Score=126.70 Aligned_cols=172 Identities=15% Similarity=0.111 Sum_probs=122.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||++.||++++++|+++|++|++.+|+.++.. ...+ ..+.++.++++|++++++++++++
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA-ATAR---ELGDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHH---TTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHH---HhCCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999999999999999998764322 1112 224578999999999998887664
Q ss_pred -CCcEEEecCCCCCCCCCCch--------------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+|+.......... ..|+.+|..
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 157 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG 157 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence 58999999998643221111 789999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC--CCCC--CCcce-eeHHHHHHHHHHhhcC
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD--QSFA--FPYIF-VEIRDVVYAHIRALEV 179 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~--~~~~--~~~~~-i~v~D~a~~~~~~~~~ 179 (258)
.+.+.+.++.+ +|+++..+-||.+..+. ........ .... ....+ ..++|+|.+++.++..
T Consensus 158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~-----------~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~ 226 (254)
T d1hdca_ 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-----------TAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSD 226 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----------HHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhCCCceEEEEeeeCcccCcc-----------chhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhch
Confidence 99999998876 48999999999986542 11111111 1111 11123 3589999999999864
Q ss_pred C--CCCc-eEEEeCC
Q 025065 180 P--KASG-RYLLAGS 191 (258)
Q Consensus 180 ~--~~~~-~~~~~~~ 191 (258)
. ...| .+.++|.
T Consensus 227 ~a~~itG~~i~vDGG 241 (254)
T d1hdca_ 227 TSSYVTGAELAVDGG 241 (254)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred hhCCCCCceEEeCCC
Confidence 3 3466 4455543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.73 E-value=8.6e-17 Score=128.06 Aligned_cols=182 Identities=19% Similarity=0.087 Sum_probs=127.2
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
++++|++|||||++.||++++++|+++|++|++.+|+..+........+...+.++.++++|+++++++.+.++
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 94 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 94 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999998876543222223333335678999999999988887654
Q ss_pred -CCcEEEecCCCCCCCCCCch-------------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNPQ-------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~~-------------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+++.......... ..|+.+|...
T Consensus 95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKaal 174 (272)
T d1g0oa_ 95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAI 174 (272)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHH
T ss_pred CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHHHH
Confidence 58999999998543221111 6799999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcC--------CCCCccH-HHHH-HHHcCCCCCCCCcceeeHHHHHHHHHH
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQ--------PILNFGA-EVIL-NLINGDQSFAFPYIFVEIRDVVYAHIR 175 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~--------~~~~~~~-~~~~-~~~~g~~~~~~~~~~i~v~D~a~~~~~ 175 (258)
+.+++.++.+ +|+++..+.||.+-.+... ....... .... ...... +..-+...+|+|.++..
T Consensus 175 ~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----PlgR~~~peevA~~v~f 250 (272)
T d1g0oa_ 175 ETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS----PLRRVGLPIDIARVVCF 250 (272)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC----TTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC----CCCCCcCHHHHHHHHHH
Confidence 9999988876 5899999999999654210 0001111 1111 111111 22347899999999999
Q ss_pred hhcCCC--CCceE-EEeC
Q 025065 176 ALEVPK--ASGRY-LLAG 190 (258)
Q Consensus 176 ~~~~~~--~~~~~-~~~~ 190 (258)
++.... ..|.. .++|
T Consensus 251 L~s~~s~~itG~~i~vDG 268 (272)
T d1g0oa_ 251 LASNDGGWVTGKVIGIDG 268 (272)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhcCccCceEeECC
Confidence 996532 46644 4444
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.72 E-value=3.8e-17 Score=127.87 Aligned_cols=174 Identities=16% Similarity=0.099 Sum_probs=122.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d 81 (258)
+.||||||++.||++++++|+++|++|++.+++..+......+++...+.++.++++|++++++++++++ ++|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4799999999999999999999999999877654332222222222234578899999999998887654 589
Q ss_pred EEEecCCCCCCCCCC---ch-----------------------------------------------hhHHHHHHHHHHH
Q 025065 82 GVFHTASPVIFLSDN---PQ-----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 82 ~Vih~a~~~~~~~~~---~~-----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
++||+|+........ .. ..|+.+|...+.+
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l 161 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF 161 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHC
Confidence 999999986432211 11 7899999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC---CCce
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK---ASGR 185 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~ 185 (258)
.+.++.+ +|+++..+.||.+-.+..... .......+.... ....+..++|+|.++..++..+. ..|.
T Consensus 162 tk~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~----pl~R~~~p~dvA~~v~fLa~S~~a~~itG~ 234 (244)
T d1edoa_ 162 SKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTI----PLGRTGQPENVAGLVEFLALSPAASYITGQ 234 (244)
T ss_dssp HHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSC----TTCSCBCHHHHHHHHHHHHHCSGGGGCCSC
T ss_pred hHHHHHHHhhhCcEEEEEecceeccHHHHHh---hHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHHCCchhcCCcCC
Confidence 9988876 489999999999876532221 122233333222 22347789999999999864332 4664
Q ss_pred E-EEe
Q 025065 186 Y-LLA 189 (258)
Q Consensus 186 ~-~~~ 189 (258)
. .++
T Consensus 235 ~i~vd 239 (244)
T d1edoa_ 235 AFTID 239 (244)
T ss_dssp EEEES
T ss_pred eEEeC
Confidence 4 443
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.72 E-value=4.6e-17 Score=128.53 Aligned_cols=179 Identities=18% Similarity=0.106 Sum_probs=125.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GC 80 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~ 80 (258)
+|.+|||||++.||++++++|+++|++|++.+|+.+.... ...++...+.++.++++|++++++++++++ ++
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~-~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRT-TLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 80 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 6888999999999999999999999999999997543321 222222334578999999999998887664 58
Q ss_pred cEEEecCCCCCCCCCC---ch-------------------------------------------------hhHHHHHHHH
Q 025065 81 DGVFHTASPVIFLSDN---PQ-------------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 81 d~Vih~a~~~~~~~~~---~~-------------------------------------------------~~Y~~sK~~~ 108 (258)
|++||+||........ .. ..|+.+|...
T Consensus 81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal 160 (257)
T d2rhca1 81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 160 (257)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHH
Confidence 9999999986432211 11 7899999999
Q ss_pred HHHHHHHHHH---cCCcEEEEcCCccccCCcCC--------CCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhh
Q 025065 109 EEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP--------ILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRAL 177 (258)
Q Consensus 109 e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~ 177 (258)
+.+.+.++.+ +|+++..+.||.|-.+.... ...........+.... +..-+..++|+|.+++.++
T Consensus 161 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~----PlgR~~~pedia~~v~fL~ 236 (257)
T d2rhca1 161 VGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV----PIGRYVQPSEVAEMVAYLI 236 (257)
T ss_dssp HHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS----TTSSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHh
Confidence 9999999887 47999999999986542110 0001112223322221 2334788999999999999
Q ss_pred cC--CCCCce-EEEeCC
Q 025065 178 EV--PKASGR-YLLAGS 191 (258)
Q Consensus 178 ~~--~~~~~~-~~~~~~ 191 (258)
.. ....|. ..++|.
T Consensus 237 S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 237 GPGAAAVTAQALNVCGG 253 (257)
T ss_dssp SGGGTTCCSCEEEESTT
T ss_pred CchhcCCcCceEEECcC
Confidence 54 335664 455443
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.72 E-value=7.4e-17 Score=127.86 Aligned_cols=182 Identities=17% Similarity=0.167 Sum_probs=122.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
.+++|.+|||||++.||++++++|+++|++|++.+|+.+.... ..+........++.++++|++++++++++++
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999997644322 2222211123468999999999988887664
Q ss_pred ---CCcEEEecCCCCCCC-CC------Cch-----------------------------------------------hhH
Q 025065 79 ---GCDGVFHTASPVIFL-SD------NPQ-----------------------------------------------EWY 101 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~-~~------~~~-----------------------------------------------~~Y 101 (258)
++|++||+||..... .. ... ..|
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y 161 (264)
T d1spxa_ 82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYY 161 (264)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHH
T ss_pred HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhh
Confidence 589999999974221 11 111 679
Q ss_pred HHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCC------CccHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 102 SLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 102 ~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
+.+|...+.+.+.++.+ +|+++..+.||.|-.+...... .........+.... +..-+..++|+|++
T Consensus 162 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~----Pl~R~g~pedvA~~ 237 (264)
T d1spxa_ 162 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV----PAGVMGQPQDIAEV 237 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHC----TTSSCBCHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcC----CCCCCcCHHHHHHH
Confidence 99999999999988876 4899999999999765322110 00111111111111 23347789999999
Q ss_pred HHHhhcCC---CCCce-EEEeC
Q 025065 173 HIRALEVP---KASGR-YLLAG 190 (258)
Q Consensus 173 ~~~~~~~~---~~~~~-~~~~~ 190 (258)
+..++..+ ...|. +.++|
T Consensus 238 v~fL~S~~~s~~itG~~i~vDG 259 (264)
T d1spxa_ 238 IAFLADRKTSSYIIGHQLVVDG 259 (264)
T ss_dssp HHHHHCHHHHTTCCSCEEEEST
T ss_pred HHHHhCCcccCCccCceEEeCC
Confidence 99998632 35664 44443
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.71 E-value=9.8e-17 Score=127.65 Aligned_cols=184 Identities=16% Similarity=0.155 Sum_probs=126.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||++.||++++++|.++|++|++.+|+.+.... +.+.+......++..+++|++++++++++++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 82 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 82 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999997643322 1222211123468999999999998887664
Q ss_pred --CCcEEEecCCCCCCCCC------Cch------------------------------------------------hhHH
Q 025065 79 --GCDGVFHTASPVIFLSD------NPQ------------------------------------------------EWYS 102 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~------~~~------------------------------------------------~~Y~ 102 (258)
++|++||+||....... ... ..|+
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~ 162 (272)
T d1xkqa_ 83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYA 162 (272)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHH
T ss_pred hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhh
Confidence 58999999998543211 110 6799
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCc--cHHHHHHHHcCC-CCCCCCcceeeHHHHHHHHHHh
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNF--GAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~--~~~~~~~~~~g~-~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
.+|...+.+.+.++.+ +|+++..+.||.|-.+........ ............ ...| ...+..++|+|+++..+
T Consensus 163 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P-lgR~g~pediA~~v~fL 241 (272)
T d1xkqa_ 163 IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP-IGAAGKPEHIANIILFL 241 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT-TSSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCC-CCCCcCHHHHHHHHHHH
Confidence 9999999999988865 589999999999976632211111 111111111111 1122 23477899999999999
Q ss_pred hcCC---CCCce-EEEeC
Q 025065 177 LEVP---KASGR-YLLAG 190 (258)
Q Consensus 177 ~~~~---~~~~~-~~~~~ 190 (258)
+..+ ...|. ..++|
T Consensus 242 ~S~~as~~iTG~~i~vDG 259 (272)
T d1xkqa_ 242 ADRNLSFYILGQSIVADG 259 (272)
T ss_dssp HCHHHHTTCCSCEEEEST
T ss_pred hCcchhCCccCeEEEeCc
Confidence 8632 35674 44443
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.71 E-value=2.3e-16 Score=122.75 Aligned_cols=169 Identities=15% Similarity=0.048 Sum_probs=119.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc-ccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~Vi 84 (258)
+++|++|||||++.||++++++|+++|++|++.+|+.+. +++ .+.+++.+|+++. +.+.+.+.++|++|
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~-----l~~-----~~~~~~~~Dv~~~~~~~~~~~g~iD~lV 71 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL-----LKR-----SGHRYVVCDLRKDLDLLFEKVKEVDILV 71 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-----HHH-----TCSEEEECCTTTCHHHHHHHSCCCSEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-----HHh-----cCCcEEEcchHHHHHHHHHHhCCCcEEE
Confidence 578999999999999999999999999999999987532 222 2456788999864 33445556799999
Q ss_pred ecCCCCCCCCCCc---h-----------------------------------------------hhHHHHHHHHHHHHHH
Q 025065 85 HTASPVIFLSDNP---Q-----------------------------------------------EWYSLAKTLAEEAAWK 114 (258)
Q Consensus 85 h~a~~~~~~~~~~---~-----------------------------------------------~~Y~~sK~~~e~~~~~ 114 (258)
|+||......... . ..|+.+|...+.+.+.
T Consensus 72 nnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~ 151 (234)
T d1o5ia_ 72 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKT 151 (234)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred ecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHH
Confidence 9999754321111 1 6899999999999988
Q ss_pred HHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCceE-EE
Q 025065 115 FAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASGRY-LL 188 (258)
Q Consensus 115 ~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~~ 188 (258)
++.+ +|+++..+.||.+-.+....... ......+.... ....+..++|+|.++..++... ...|.. .+
T Consensus 152 lA~ela~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~~----pl~R~~~pediA~~v~fL~S~~s~~itG~~i~v 225 (234)
T d1o5ia_ 152 LSFEVAPYGITVNCVAPGWTETERVKELLS--EEKKKQVESQI----PMRRMAKPEEIASVVAFLCSEKASYLTGQTIVV 225 (234)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCTTHHHHSC--HHHHHHHHTTS----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHhcccCeEEeecccCccchhhhhhhcC--HHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhChhhcCCcCcEEEE
Confidence 8876 48999999999987664221111 11122222221 2334779999999999998643 346644 45
Q ss_pred eC
Q 025065 189 AG 190 (258)
Q Consensus 189 ~~ 190 (258)
+|
T Consensus 226 DG 227 (234)
T d1o5ia_ 226 DG 227 (234)
T ss_dssp ST
T ss_pred Cc
Confidence 44
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.71 E-value=4e-17 Score=128.87 Aligned_cols=175 Identities=15% Similarity=0.097 Sum_probs=114.9
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
++++|++|||||++.||++++++|+++|++|++.+|+..+... ...++.....++..+.+|++++++++++++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNE-CLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 83 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999987644322 222222224578999999999988776542
Q ss_pred --CCcEEEecCCCCCCCCC---Cch-----------------------------------------------hhHHHHHH
Q 025065 79 --GCDGVFHTASPVIFLSD---NPQ-----------------------------------------------EWYSLAKT 106 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~---~~~-----------------------------------------------~~Y~~sK~ 106 (258)
.+|++||+||....... ... ..|+.+|.
T Consensus 84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 163 (259)
T d1xq1a_ 84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG 163 (259)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccccc
Confidence 38999999998643211 111 68999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC--CC
Q 025065 107 LAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV--PK 181 (258)
Q Consensus 107 ~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~--~~ 181 (258)
..+.+.+.++.+ +|+++..+-||.|-.+........ . ..+..... . +...+..++|+|.+++.++.. ..
T Consensus 164 al~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~--~-~~~~~~~~--~-pl~R~~~pedvA~~v~fL~S~~s~~ 237 (259)
T d1xq1a_ 164 ALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD--E-FKKVVISR--K-PLGRFGEPEEVSSLVAFLCMPAASY 237 (259)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------CCGGGGHHHHHHHTSGGGTT
T ss_pred chhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchH--H-HHHHHHhC--C-CCCCCcCHHHHHHHHHHHhCchhcC
Confidence 999999988876 489999999999976643221110 0 11111111 1 223467899999999998854 33
Q ss_pred CCceE
Q 025065 182 ASGRY 186 (258)
Q Consensus 182 ~~~~~ 186 (258)
..|..
T Consensus 238 iTG~~ 242 (259)
T d1xq1a_ 238 ITGQT 242 (259)
T ss_dssp CCSCE
T ss_pred CcCcE
Confidence 46643
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.71 E-value=1.2e-16 Score=127.31 Aligned_cols=184 Identities=15% Similarity=0.194 Sum_probs=126.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||++.||++++++|+++|++|++.+|+.++... ..+........++..+.+|++++++++++++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999997643221 1222211123578999999999988877654
Q ss_pred --CCcEEEecCCCCCCCC--C---Cch-----------------------------------------------hhHHHH
Q 025065 79 --GCDGVFHTASPVIFLS--D---NPQ-----------------------------------------------EWYSLA 104 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~--~---~~~-----------------------------------------------~~Y~~s 104 (258)
++|++||+||...... . ... ..|+.+
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~as 161 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA 161 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhh
Confidence 5899999999743211 1 111 679999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCC-CCCCCCcceeeHHHHHHHHHHhhc
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALE 178 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~-~~~~~~~~~i~v~D~a~~~~~~~~ 178 (258)
|...+.+.+.++.+ +|+++..+.||.|-.+....... ....-........ ...| ...+..++|+|.+++.++.
T Consensus 162 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iP-lgR~g~pediA~~v~fL~S 240 (274)
T d1xhla_ 162 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP-VGHCGKPEEIANIIVFLAD 240 (274)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT-TSSCBCHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCC-CCCCcCHHHHHHHHHHHcC
Confidence 99999999888876 48999999999997763221111 1111122222211 1122 2346789999999999985
Q ss_pred C---CCCCc-eEEEeC
Q 025065 179 V---PKASG-RYLLAG 190 (258)
Q Consensus 179 ~---~~~~~-~~~~~~ 190 (258)
. ....| ...++|
T Consensus 241 ~d~s~~itG~~i~vDG 256 (274)
T d1xhla_ 241 RNLSSYIIGQSIVADG 256 (274)
T ss_dssp HHHHTTCCSCEEEEST
T ss_pred CccccCccCcEEEeCc
Confidence 3 23567 445554
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=1.2e-16 Score=128.54 Aligned_cols=182 Identities=17% Similarity=0.150 Sum_probs=126.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhcc-cc-CcCCcEEEEEccCCCcccHHHHhC---
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRE-LD-GATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~-~~-~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
+++|++|||||++.||++++++|+++|++|++.+|+.++... +.+.. .. ....++..+++|++++++++++++
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999999999997654322 11111 11 113578899999999998887664
Q ss_pred ----CCcEEEecCCCCCCCCCCc---h----------------------------------------------hhHHHHH
Q 025065 79 ----GCDGVFHTASPVIFLSDNP---Q----------------------------------------------EWYSLAK 105 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~~~~---~----------------------------------------------~~Y~~sK 105 (258)
++|++||+|+......... . ..|+.+|
T Consensus 90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~~~~~Y~asK 169 (297)
T d1yxma1 90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAAR 169 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHHHHH
T ss_pred HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccccccccchhHH
Confidence 5899999999754321111 1 7899999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCC-CCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 106 TLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGD-QSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 106 ~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
...+.+.+.++.+ +|+++..+.||.|..+.......... ....+.. ... ....+..++|+|.+++.++...
T Consensus 170 aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~~-plgR~g~pedvA~~v~fL~Sd~s 245 (297)
T d1yxma1 170 AGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG---QSFFEGSFQKI-PAKRIGVPEEVSSVVCFLLSPAA 245 (297)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG---GGGGTTGGGGS-TTSSCBCTHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccC---HHHHHHHHhcC-CCCCCcCHHHHHHHHHHHhCchh
Confidence 9999999998876 48999999999998764322111100 0111111 111 2334678999999999999643
Q ss_pred -CCCceE-EEeCC
Q 025065 181 -KASGRY-LLAGS 191 (258)
Q Consensus 181 -~~~~~~-~~~~~ 191 (258)
...|.. .++|.
T Consensus 246 ~~iTG~~i~VDGG 258 (297)
T d1yxma1 246 SFITGQSVDVDGG 258 (297)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCcCCcEEEeCcC
Confidence 356744 55443
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.69 E-value=1.8e-16 Score=124.99 Aligned_cols=178 Identities=20% Similarity=0.182 Sum_probs=122.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d 81 (258)
|.+|||||++.||++++++|+++|++|++.+|+.++... ..+++.....++.++++|+++++++.++++ ++|
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~-~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKA-VASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 456999999999999999999999999999997644321 122222234578999999999988887654 589
Q ss_pred EEEecCCCCCCCCC---Cch------------------------------------------------hhHHHHHHHHHH
Q 025065 82 GVFHTASPVIFLSD---NPQ------------------------------------------------EWYSLAKTLAEE 110 (258)
Q Consensus 82 ~Vih~a~~~~~~~~---~~~------------------------------------------------~~Y~~sK~~~e~ 110 (258)
++||+||....... ... ..|+.+|...+.
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 160 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG 160 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence 99999998543211 111 779999999999
Q ss_pred HHHHHHHH---cCCcEEEEcCCccccCCcCCCC--------CccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 111 AAWKFAKE---NGIDLVAIHPGTVIGPFFQPIL--------NFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 111 ~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+.+.++.+ +|+++..+.||.+-.+...... .........+.... +...+..++|+|+++..++..
T Consensus 161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----pl~R~~~peevA~~v~fL~S~ 236 (255)
T d1gega_ 161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI----TLGRLSEPEDVAACVSYLASP 236 (255)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC----TTCSCBCHHHHHHHHHHHHSG
T ss_pred hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCc
Confidence 99988866 4899999999998654211000 00001111111111 233477899999999999864
Q ss_pred C--CCCce-EEEeCC
Q 025065 180 P--KASGR-YLLAGS 191 (258)
Q Consensus 180 ~--~~~~~-~~~~~~ 191 (258)
. ...|. ..++|.
T Consensus 237 ~a~~itG~~i~vDGG 251 (255)
T d1gega_ 237 DSDYMTGQSLLIDGG 251 (255)
T ss_dssp GGTTCCSCEEEESSS
T ss_pred hhCCccCcEEEecCC
Confidence 3 34664 455443
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=1.2e-16 Score=125.78 Aligned_cols=175 Identities=17% Similarity=0.145 Sum_probs=122.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcEEEEEccCCCcccHHHHhC------
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
++|++|||||++.||++++++|+++|++|++.+|+.++... ...++.. .+.++.++++|++++++++++++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQ-CKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 57999999999999999999999999999999997654322 1111111 13578999999999998887664
Q ss_pred -CCcEEEecCCCCCCCCCCch---------------------------------------------hhHHHHHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNPQ---------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~~---------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
++|++||+|+.......+.. ..|+.+|...+.+.
T Consensus 81 G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt 160 (254)
T d2gdza1 81 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFT 160 (254)
T ss_dssp SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHH
Confidence 58999999998654322111 67999999999988
Q ss_pred HH--HHH---HcCCcEEEEcCCccccCCcCCCCC--------ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 113 WK--FAK---ENGIDLVAIHPGTVIGPFFQPILN--------FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 113 ~~--~~~---~~~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
+. ++. .+|+++..+.||.|-.+....... .....+.... ....+..++|+|++++.++..
T Consensus 161 rs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~r~~~pedvA~~v~fL~s~ 233 (254)
T d2gdza1 161 RSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI-------KYYGILDPPLIANGLITLIED 233 (254)
T ss_dssp HHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH-------HHHCCBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC-------CCCCCcCHHHHHHHHHHHHcC
Confidence 74 232 468999999999986542111100 0000111100 112366899999999999987
Q ss_pred CCCCc-eEEEe
Q 025065 180 PKASG-RYLLA 189 (258)
Q Consensus 180 ~~~~~-~~~~~ 189 (258)
+...| ...++
T Consensus 234 ~~itG~~i~Vd 244 (254)
T d2gdza1 234 DALNGAIMKIT 244 (254)
T ss_dssp TTCSSCEEEEE
T ss_pred CCCCCCEEEEC
Confidence 76677 34444
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.69 E-value=3e-16 Score=123.48 Aligned_cols=177 Identities=15% Similarity=0.112 Sum_probs=122.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCC-CcccHHHHh------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLL-EEGSFDSAV------ 77 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~------ 77 (258)
+++|+||||||++.||.+++++|+++|.+|++++|+.+.... ..+. ......++.++.+|++ +.+++++++
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK-AINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHH-HHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHH-hhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999887765422 1111 1122457899999998 444565544
Q ss_pred -CCCcEEEecCCCCCCCCCCch---------------------------------------------hhHHHHHHHHHHH
Q 025065 78 -DGCDGVFHTASPVIFLSDNPQ---------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 78 -~~~d~Vih~a~~~~~~~~~~~---------------------------------------------~~Y~~sK~~~e~~ 111 (258)
.++|++||+||.......+.. ..|+.+|.....+
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~ 161 (254)
T d1sbya1 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF 161 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHH
Confidence 368999999997543221111 6899999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCC--ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCc-e
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILN--FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASG-R 185 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~ 185 (258)
.+.++.+ +|+++..+-||.|..+....... .....+.... ..+.....+++|++++.+++... .| +
T Consensus 162 t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~e~va~~~~~~~~~~~-tG~v 233 (254)
T d1sbya1 162 TNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-------LSHPTQTSEQCGQNFVKAIEANK-NGAI 233 (254)
T ss_dssp HHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-------TTSCCEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred HHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc-------ccCCCCCHHHHHHHHHHhhhCCC-CCCE
Confidence 8888765 48999999999998752111100 0000111111 22345689999999999887764 55 5
Q ss_pred EEEeCC
Q 025065 186 YLLAGS 191 (258)
Q Consensus 186 ~~~~~~ 191 (258)
+.+.+.
T Consensus 234 i~vdgG 239 (254)
T d1sbya1 234 WKLDLG 239 (254)
T ss_dssp EEEETT
T ss_pred EEECCC
Confidence 666653
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=8.9e-17 Score=125.60 Aligned_cols=159 Identities=13% Similarity=0.064 Sum_probs=119.0
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
+.++|.++||||++.||++++++|+++|++|++.+|+.++... ...++...+.++..+.+|++|++++.++++
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~-~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEE-TAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 82 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999999999997654322 112222235678999999999998887654
Q ss_pred -CCcEEEecCCCCCCCCCCch--------------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~ 107 (258)
++|++||+||.......... ..|+.||.+
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 162 (244)
T d1yb1a_ 83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFA 162 (244)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHH
T ss_pred CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHH
Confidence 58999999998654322222 789999999
Q ss_pred HHHHHHHHHHH------cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 108 AEEAAWKFAKE------NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 108 ~e~~~~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
.+.+.+.++.+ .|+.++.+.||.|-.+..... ... ...++..+|+|+.++..+..+.
T Consensus 163 l~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~-------~~~----------~~~~~~pe~va~~i~~~~~~~~ 225 (244)
T d1yb1a_ 163 AVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-------STS----------LGPTLEPEEVVNRLMHGILTEQ 225 (244)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-------HHH----------HCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc-------Ccc----------ccCCCCHHHHHHHHHHHHhcCC
Confidence 99998888765 379999999998865532210 001 1124578999999998877643
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=7.7e-16 Score=120.46 Aligned_cols=175 Identities=18% Similarity=0.143 Sum_probs=124.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh---CCCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV---DGCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~ 82 (258)
+++|++|||||++.||+++++.|+++|++|++.+|++++. +++.. ..+++...+|+.+.+..+... .++|+
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l-----~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~id~ 77 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL-----QELEK-YPGIQTRVLDVTKKKQIDQFANEVERLDV 77 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----GGGGG-STTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHh-ccCCceeeeecccccccccccccccccee
Confidence 6789999999999999999999999999999999975332 22211 246788899998876666544 46899
Q ss_pred EEecCCCCCCCCCC---ch------------------------------------------------hhHHHHHHHHHHH
Q 025065 83 VFHTASPVIFLSDN---PQ------------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 83 Vih~a~~~~~~~~~---~~------------------------------------------------~~Y~~sK~~~e~~ 111 (258)
+||+||........ .. ..|+.+|...+.+
T Consensus 78 lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l 157 (245)
T d2ag5a1 78 LFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGL 157 (245)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHH
T ss_pred EEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHH
Confidence 99999986442211 11 6799999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCC---CCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCC
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPI---LNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KAS 183 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~ 183 (258)
++.++.+ +|+++..+.||.|-++..... ..........+.... +...+..++|+|+++..++... ...
T Consensus 158 ~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~----pl~R~~~pedva~~v~fL~s~~s~~iT 233 (245)
T d2ag5a1 158 TKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ----KTGRFATAEEIAMLCVYLASDESAYVT 233 (245)
T ss_dssp HHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC----TTSSCEEHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhChhhCCCc
Confidence 9999876 489999999999976532210 011112222222222 2344889999999999999753 346
Q ss_pred ceE-EEeC
Q 025065 184 GRY-LLAG 190 (258)
Q Consensus 184 ~~~-~~~~ 190 (258)
|.. .++|
T Consensus 234 G~~i~VDG 241 (245)
T d2ag5a1 234 GNPVIIDG 241 (245)
T ss_dssp SCEEEECT
T ss_pred CceEEeCC
Confidence 644 4443
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.66 E-value=4.4e-16 Score=121.44 Aligned_cols=156 Identities=12% Similarity=0.142 Sum_probs=115.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCE-------EEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC---
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYT-------VKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--- 78 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--- 78 (258)
+.||||||++.||++++++|.++|++ |+..+|+..... +...++...+.++.++.+|++|+++++++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~-~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLE-KISLECRAEGALTDTITADISDMADVRRLTTHIV 80 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHH-HHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 35899999999999999999999987 777888654322 1222233334678899999999998887654
Q ss_pred ----CCcEEEecCCCCCCCCCC---ch-----------------------------------------------hhHHHH
Q 025065 79 ----GCDGVFHTASPVIFLSDN---PQ-----------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~~~~~---~~-----------------------------------------------~~Y~~s 104 (258)
++|++||+|+........ .. ..|+.+
T Consensus 81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as 160 (240)
T d2bd0a1 81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS 160 (240)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence 589999999986432211 11 689999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
|...+.+.+.++.+ +|+++..+.||.+-.+....... . ....+..++|+|++++.++.++.
T Consensus 161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~------------~----~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------------E----MQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------------T----TGGGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH------------h----hHhcCCCHHHHHHHHHHHHcCCc
Confidence 99999999888766 58999999999997654221100 0 11235678999999999998764
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.66 E-value=4e-16 Score=122.66 Aligned_cols=181 Identities=20% Similarity=0.150 Sum_probs=123.2
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.+++|++|||||++.||++++++|+++|++|++.+|+.+.... ...++ +.+..++++|++++++++++++
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~-~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 78 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ-LAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence 3678999999999999999999999999999999986533211 11222 3568889999999988877654
Q ss_pred -CCcEEEecCCCCCCCCC---Cch----------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSD---NPQ----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~---~~~----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||....... ... ..|+.+|...
T Consensus 79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal 158 (253)
T d1hxha_ 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAV 158 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHHH
Confidence 58999999998643211 111 6899999999
Q ss_pred HHHHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--C
Q 025065 109 EEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP--K 181 (258)
Q Consensus 109 e~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~ 181 (258)
+.+.+.++.+ +++++..+-||.+..+......+.. ...............-.+..++|+|++++.++... .
T Consensus 159 ~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~ 236 (253)
T d1hxha_ 159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG--VSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSV 236 (253)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT--CCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch--hhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCC
Confidence 9988877754 3599999999999765311100000 00111111110002235788999999999998643 3
Q ss_pred CCce-EEEeCC
Q 025065 182 ASGR-YLLAGS 191 (258)
Q Consensus 182 ~~~~-~~~~~~ 191 (258)
..|. ..++|.
T Consensus 237 itG~~i~VDGG 247 (253)
T d1hxha_ 237 MSGSELHADNS 247 (253)
T ss_dssp CCSCEEEESSS
T ss_pred CcCcEEEECcc
Confidence 4664 455544
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.65 E-value=3.3e-16 Score=124.74 Aligned_cols=178 Identities=12% Similarity=0.062 Sum_probs=122.5
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+++|++|||||++.||++++++|.++|++|++.+|+.++... ...+ .+.++..+.+|++++++++++++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~-~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 78 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE-LETD---HGDNVLGIVGDVRSLEDQKQAASRCVARFG 78 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHH---HGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHH---cCCCeeEEecccccHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999999987533211 1111 13578999999999988877654
Q ss_pred CCcEEEecCCCCCCCC------CCc-----h-------------------------------------------hhHHHH
Q 025065 79 GCDGVFHTASPVIFLS------DNP-----Q-------------------------------------------EWYSLA 104 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~------~~~-----~-------------------------------------------~~Y~~s 104 (258)
++|++||+||...... .+. . ..|+.+
T Consensus 79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~as 158 (276)
T d1bdba_ 79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAA 158 (276)
T ss_dssp CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHHHH
T ss_pred CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHHHH
Confidence 6899999999753211 110 0 679999
Q ss_pred HHHHHHHHHHHHHHc--CCcEEEEcCCccccCCcCCCCCcc------HHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHh
Q 025065 105 KTLAEEAAWKFAKEN--GIDLVAIHPGTVIGPFFQPILNFG------AEVILNLINGDQSFAFPYIFVEIRDVVYAHIRA 176 (258)
Q Consensus 105 K~~~e~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~ 176 (258)
|...+.+.+.++.+. ++++..+.||.|-.+...+..... ..-+....... . +..-+..++|+|.+++.+
T Consensus 159 Kaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-PlgR~g~peeva~~v~fL 235 (276)
T d1bdba_ 159 KHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV--L-PIGRMPEVEEYTGAYVFF 235 (276)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTT--C-TTSSCCCGGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhc--C-CCCCCcCHHHHHHHHHHH
Confidence 999999999888764 599999999999765322211000 00011222222 1 223467899999999988
Q ss_pred hcC---CCCCceE-EEeC
Q 025065 177 LEV---PKASGRY-LLAG 190 (258)
Q Consensus 177 ~~~---~~~~~~~-~~~~ 190 (258)
+.. ....|.. .++|
T Consensus 236 ~S~~~a~~itG~~i~VDG 253 (276)
T d1bdba_ 236 ATRGDAAPATGALLNYDG 253 (276)
T ss_dssp HCHHHHTTCSSCEEEESS
T ss_pred cCCcccCCeeCcEEEECc
Confidence 752 3456744 4444
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.63 E-value=2.8e-15 Score=119.29 Aligned_cols=179 Identities=16% Similarity=0.099 Sum_probs=124.6
Q ss_pred CCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+| .||.+++++|+++|++|++.+|+.... +...++........+..+|+++.++..++++
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~--~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE--KRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 80 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTH--HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence 5789999999987 799999999999999999999975432 2222222223566788999999987776653
Q ss_pred --CCcEEEecCCCCCCC--CCCc-h-------------------------------------------------hhHHHH
Q 025065 79 --GCDGVFHTASPVIFL--SDNP-Q-------------------------------------------------EWYSLA 104 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~--~~~~-~-------------------------------------------------~~Y~~s 104 (258)
.+|++||+++..... .... . ..|+.+
T Consensus 81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~as 160 (274)
T d2pd4a1 81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLA 160 (274)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHH
T ss_pred cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHH
Confidence 589999999975321 1111 1 679999
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC-
Q 025065 105 KTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP- 180 (258)
Q Consensus 105 K~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~- 180 (258)
|...+.+++..+.+ +|+++..+.||.+..+....... ............ ....+..++|+|.++..++...
T Consensus 161 K~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~----p~~r~~~pedIA~~v~fL~S~~s 235 (274)
T d2pd4a1 161 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-FRMILKWNEINA----PLRKNVSLEEVGNAGMYLLSSLS 235 (274)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-HHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc-hHHHHHHHhhhh----hccCCcCHHHHHHHHHHHhChhh
Confidence 99999998887765 48999999999998765432211 111111111111 2345779999999999999753
Q ss_pred -CCCce-EEEeCC
Q 025065 181 -KASGR-YLLAGS 191 (258)
Q Consensus 181 -~~~~~-~~~~~~ 191 (258)
...|. +.++|.
T Consensus 236 ~~itG~~i~vDGG 248 (274)
T d2pd4a1 236 SGVSGEVHFVDAG 248 (274)
T ss_dssp TTCCSCEEEESTT
T ss_pred CCCcCceEEECCC
Confidence 34664 455543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.63 E-value=2.3e-15 Score=118.06 Aligned_cols=126 Identities=23% Similarity=0.285 Sum_probs=97.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHH---CCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQ---RGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
||+||||||++.||.+++++|++ +|++|++.+|+.+.... +.++.....++.++.+|++|+++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE--LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 79 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH--HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH--HHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence 57899999999999999999974 68999999998766532 22222224689999999999988876543
Q ss_pred ---CCcEEEecCCCCCCCC----CCch-----------------------------------------------------
Q 025065 79 ---GCDGVFHTASPVIFLS----DNPQ----------------------------------------------------- 98 (258)
Q Consensus 79 ---~~d~Vih~a~~~~~~~----~~~~----------------------------------------------------- 98 (258)
++|++||+||...... ....
T Consensus 80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~ 159 (248)
T d1snya_ 80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 159 (248)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 4899999999854321 1111
Q ss_pred --------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCC
Q 025065 99 --------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPF 135 (258)
Q Consensus 99 --------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~ 135 (258)
..|+.||.+...+.+.++.+ .|+++..+.||.|-.+.
T Consensus 160 ~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m 207 (248)
T d1snya_ 160 QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207 (248)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence 25999999999998887755 48999999999996553
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=3.6e-15 Score=117.63 Aligned_cols=178 Identities=17% Similarity=0.112 Sum_probs=123.6
Q ss_pred CCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
+++|++|||||+| .||+++++.|+++|++|++.+|+.... ...++..........+..|+.+.++....+.
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK--GRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 80 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTH--HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence 5789999999999 799999999999999999999875432 2222222223456778889998877666543
Q ss_pred --CCcEEEecCCCCCCCCCCch-----------------------------------------------------hhHHH
Q 025065 79 --GCDGVFHTASPVIFLSDNPQ-----------------------------------------------------EWYSL 103 (258)
Q Consensus 79 --~~d~Vih~a~~~~~~~~~~~-----------------------------------------------------~~Y~~ 103 (258)
..|++||+++.......... ..|+.
T Consensus 81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~ 160 (258)
T d1qsga_ 81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGL 160 (258)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHH
T ss_pred ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHH
Confidence 46999999988533211100 67999
Q ss_pred HHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 104 AKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 104 sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
+|.+.+.+++.++.+ +|+++..++||.|..+..... .............. +...+..++|+|.++..++...
T Consensus 161 sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~----pl~R~~~peeia~~v~fL~s~~ 235 (258)
T d1qsga_ 161 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVT----PIRRTVTIEDVGNSAAFLCSDL 235 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHS----TTSSCCCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHhCccCceeeccccccccccccccc-chhhhHHHHHHhCC----CCCCCcCHHHHHHHHHHHhCch
Confidence 999999999998876 479999999999987754332 11122222222111 2234778999999999999653
Q ss_pred --CCCceE-EEeC
Q 025065 181 --KASGRY-LLAG 190 (258)
Q Consensus 181 --~~~~~~-~~~~ 190 (258)
...|.. .++|
T Consensus 236 s~~itG~~i~vDG 248 (258)
T d1qsga_ 236 SAGISGEVVHVDG 248 (258)
T ss_dssp GTTCCSCEEEEST
T ss_pred hcCccCceEEECc
Confidence 356744 4444
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.61 E-value=5e-15 Score=116.28 Aligned_cols=155 Identities=20% Similarity=0.256 Sum_probs=107.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD----- 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----- 78 (258)
|++|+||||||++.||.+++++|+++|+ .|++.+|+.++.. .+.+. .+.++.++++|+++.++++++++
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~--~l~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 76 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT--ELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH--HHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHH--HHHHh--hCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999999995 6888888764432 12211 24579999999999988776543
Q ss_pred ----CCcEEEecCCCCCC-C-CCCc--h----------------------------------------------------
Q 025065 79 ----GCDGVFHTASPVIF-L-SDNP--Q---------------------------------------------------- 98 (258)
Q Consensus 79 ----~~d~Vih~a~~~~~-~-~~~~--~---------------------------------------------------- 98 (258)
++|++||+||.... . ..+. .
T Consensus 77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~ 156 (250)
T d1yo6a1 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred hCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence 38999999997532 1 1111 1
Q ss_pred -------------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcc
Q 025065 99 -------------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYI 162 (258)
Q Consensus 99 -------------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (258)
..|+.||.+...+.+.++.+ .|+++..+-||.|-.+-.. . ..
T Consensus 157 ~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~----------------~------~~ 214 (250)
T d1yo6a1 157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG----------------K------NA 214 (250)
T ss_dssp STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred ccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC----------------C------CC
Confidence 13999999999999888875 4899999999988543210 0 01
Q ss_pred eeeHHHHHHHHHHhhcCCC--CCceE
Q 025065 163 FVEIRDVVYAHIRALEVPK--ASGRY 186 (258)
Q Consensus 163 ~i~v~D~a~~~~~~~~~~~--~~~~~ 186 (258)
.+.+++.++.++..+.... ..|.|
T Consensus 215 ~~~~e~~a~~~~~~~~~~~~~~sG~f 240 (250)
T d1yo6a1 215 ALTVEQSTAELISSFNKLDNSHNGRF 240 (250)
T ss_dssp ----HHHHHHHHHHHTTCCGGGTTCE
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCeEE
Confidence 3456888888888887643 35655
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.61 E-value=3.4e-15 Score=117.90 Aligned_cols=166 Identities=18% Similarity=0.159 Sum_probs=116.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD------ 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 78 (258)
.++||||||+|.||.+++++|.++|+ +|+++.|+..+... +...++...+.++.++.+|++|++++.++++
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~ 88 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 88 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence 46899999999999999999999998 57778886433221 2223333334679999999999999988775
Q ss_pred CCcEEEecCCCCCCCCCCch----------------------------------------------hhHHHHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSDNPQ----------------------------------------------EWYSLAKTLAEEAA 112 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~~~~----------------------------------------------~~Y~~sK~~~e~~~ 112 (258)
.+|.|+|+++.......... ..|+.+|...+.+.
T Consensus 89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la 168 (259)
T d2fr1a1 89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLA 168 (259)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHH
T ss_pred cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHHhHHHHH
Confidence 36899999998654322211 67999999999988
Q ss_pred HHHHHHcCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCCCCce
Q 025065 113 WKFAKENGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPKASGR 185 (258)
Q Consensus 113 ~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 185 (258)
+.+. ..|++++.+.||.+.+++.... .....+.. .....+..+++++++..++.++.....
T Consensus 169 ~~~~-~~Gi~v~~I~pg~~~~~g~~~~------~~~~~~~~-----~G~~~~~~~~~~~~l~~~l~~~~~~~~ 229 (259)
T d2fr1a1 169 QQRR-SDGLPATAVAWGTWAGSGMAEG------PVADRFRR-----HGVIEMPPETACRALQNALDRAEVCPI 229 (259)
T ss_dssp HHHH-HTTCCCEEEEECCBC------------------CTT-----TTEECBCHHHHHHHHHHHHHTTCSSCE
T ss_pred HHHH-hCCCCEEECCCCcccCCccccc------hHHHHHHh-----cCCCCCCHHHHHHHHHHHHhCCCceEE
Confidence 7765 4599999999998876542211 01111111 223467899999999999988765443
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=1.1e-14 Score=116.30 Aligned_cols=181 Identities=20% Similarity=0.197 Sum_probs=118.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEc---CCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVR---DPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r---~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
.|.||||||++.||+++++.|.++|.+|+.+.+ +...... +....+...+.++..+.+|++|++++.++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 466789999999999999999999987655543 3222111 1222333335689999999999999988764
Q ss_pred -CCcEEEecCCCCCCCCCCch--------------------------------------------------hhHHHHHHH
Q 025065 79 -GCDGVFHTASPVIFLSDNPQ--------------------------------------------------EWYSLAKTL 107 (258)
Q Consensus 79 -~~d~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~~sK~~ 107 (258)
.+|+++|+|+.......... ..|+.+|..
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaa 161 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA 161 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHH
Confidence 47999999998643221111 689999999
Q ss_pred HHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHH--------HHHHHH----cCCCCCCCCcceeeHHHHHHH
Q 025065 108 AEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAE--------VILNLI----NGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 108 ~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~--------~~~~~~----~g~~~~~~~~~~i~v~D~a~~ 172 (258)
.+.+.+.++.+ +|+++..+.||.|-.+........... ...+.. ..+. . .......++|+|++
T Consensus 162 l~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~PeeVA~~ 239 (285)
T d1jtva_ 162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQ-V-FREAAQNPEEVAEV 239 (285)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHH-H-HHHHCBCHHHHHHH
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhh-h-hcccCCCHHHHHHH
Confidence 99999888876 489999999999976543221111000 011100 0000 0 11225578999999
Q ss_pred HHHhhcCCCCCceEEEeC
Q 025065 173 HIRALEVPKASGRYLLAG 190 (258)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~ 190 (258)
++.+++.+.+.-.|+.+.
T Consensus 240 v~~~~~~~~p~~ry~~g~ 257 (285)
T d1jtva_ 240 FLTALRAPKPTLRYFTTE 257 (285)
T ss_dssp HHHHHHCSSCCSEEESCS
T ss_pred HHHHHhCCCCCeEEecHH
Confidence 999998875444555443
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.58 E-value=9.2e-15 Score=115.31 Aligned_cols=171 Identities=16% Similarity=0.085 Sum_probs=117.0
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHH---CCCEEEEEEcCCCCccchhhcccc--CcCCcEEEEEccCCCcccHHHHhC-
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQ---RGYTVKATVRDPNSPKTEHLRELD--GATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
.+++|.++||||++.||++++++|.+ +|++|++.+|+.+.... ..+++. ....++.++++|++++++++++++
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~-~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~ 81 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQ-LKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHH-HHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHH-HHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 46789999999999999999999986 79999999997644321 111111 113468899999999988887652
Q ss_pred ----------CCcEEEecCCCCCCCCC------Cch--------------------------------------------
Q 025065 79 ----------GCDGVFHTASPVIFLSD------NPQ-------------------------------------------- 98 (258)
Q Consensus 79 ----------~~d~Vih~a~~~~~~~~------~~~-------------------------------------------- 98 (258)
..|+++|+||....... +..
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~ 161 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence 35799999997532211 111
Q ss_pred -----hhHHHHHHHHHHHHHHHHHH-cCCcEEEEcCCccccCCcCCC--CCccHHHHHHHHcCCCCCCCCcceeeHHHHH
Q 025065 99 -----EWYSLAKTLAEEAAWKFAKE-NGIDLVAIHPGTVIGPFFQPI--LNFGAEVILNLINGDQSFAFPYIFVEIRDVV 170 (258)
Q Consensus 99 -----~~Y~~sK~~~e~~~~~~~~~-~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a 170 (258)
..|+.+|...+.+.+.++.+ +|+++..+.||.|..+..... ..........+.... ....+..++|+|
T Consensus 162 ~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~----~~~r~~~p~evA 237 (259)
T d1oaaa_ 162 PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK----SDGALVDCGTSA 237 (259)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH----HTTCSBCHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC----CCCCCCCHHHHH
Confidence 77999999999999988866 489999999999976531100 000111111111000 112356899999
Q ss_pred HHHHHhhcCC
Q 025065 171 YAHIRALEVP 180 (258)
Q Consensus 171 ~~~~~~~~~~ 180 (258)
++++.++...
T Consensus 238 ~~i~~ll~~~ 247 (259)
T d1oaaa_ 238 QKLLGLLQKD 247 (259)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHhhhc
Confidence 9999988653
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.56 E-value=1.7e-14 Score=115.95 Aligned_cols=158 Identities=19% Similarity=-0.013 Sum_probs=110.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc----hhhcccc-CcCCcEEEEEccCCCcccHHHHhC-
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT----EHLRELD-GATERLHLFKANLLEEGSFDSAVD- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~- 78 (258)
.+++|++|||||++.||++++++|+++|++|++.+|+.+.... ...++.. ........+.+|+++.++.+++++
T Consensus 4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 83 (302)
T d1gz6a_ 4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT 83 (302)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence 4578999999999999999999999999999999887543211 1111111 111234556788888877766543
Q ss_pred ------CCcEEEecCCCCCCCCCCch--------------------------------------------------hhHH
Q 025065 79 ------GCDGVFHTASPVIFLSDNPQ--------------------------------------------------EWYS 102 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~~~~~~~--------------------------------------------------~~Y~ 102 (258)
++|++||+||.......... ..|+
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~ 163 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS 163 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHH
Confidence 68999999998644221111 7899
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+|...+.+.+.++.+ +|+++..+-||.+-.+..... .. ....++.++|+|.++++++..
T Consensus 164 asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~----~~-------------~~~~~~~PedvA~~v~fL~S~ 226 (302)
T d1gz6a_ 164 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM----PE-------------DLVEALKPEYVAPLVLWLCHE 226 (302)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS----CH-------------HHHHHSCGGGTHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC----cH-------------hhHhcCCHHHHHHHHHHHcCC
Confidence 9999999999998876 489999999997643321111 00 111244578999999998853
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.5e-14 Score=115.16 Aligned_cols=83 Identities=19% Similarity=0.162 Sum_probs=64.9
Q ss_pred CcEE-EEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------
Q 025065 8 EKVV-CVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------- 78 (258)
Q Consensus 8 ~~~i-lItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 78 (258)
+|+| |||||++.||.+++++|+++ |+.|++.+|+.++... ..+++.....++.++++|+++.++++++++
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g 80 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQA-AVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 80 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHH-HHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence 4555 89999999999999999986 8999999998755322 222333334678999999999988876653
Q ss_pred CCcEEEecCCCCC
Q 025065 79 GCDGVFHTASPVI 91 (258)
Q Consensus 79 ~~d~Vih~a~~~~ 91 (258)
++|++||+||...
T Consensus 81 ~iDiLVnNAGi~~ 93 (275)
T d1wmaa1 81 GLDVLVNNAGIAF 93 (275)
T ss_dssp SEEEEEECCCCCC
T ss_pred CcEEEEEcCCcCC
Confidence 5899999999854
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.55 E-value=1.5e-14 Score=114.64 Aligned_cols=182 Identities=16% Similarity=0.143 Sum_probs=119.6
Q ss_pred CCCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC----
Q 025065 5 EGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD---- 78 (258)
Q Consensus 5 ~~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---- 78 (258)
.|++|++|||||+| .||.+++++|+++|++|++.+|+..+......+ ..+.+...+++|+++.++..++++
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~---~~~~~~~~~~~dv~~~~~~~~~~~~v~~ 79 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---RLPAKAPLLELDVQNEEHLASLAGRVTE 79 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---TSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH---HcCCceeeEeeecccccccccccchhhh
Confidence 35789999999765 599999999999999999998876432111111 124567889999999876655432
Q ss_pred ------CCcEEEecCCCCCCCC--CCc-h-------------------------------------------------hh
Q 025065 79 ------GCDGVFHTASPVIFLS--DNP-Q-------------------------------------------------EW 100 (258)
Q Consensus 79 ------~~d~Vih~a~~~~~~~--~~~-~-------------------------------------------------~~ 100 (258)
..|+++|+++...... ..+ . ..
T Consensus 80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~ 159 (268)
T d2h7ma1 80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNW 159 (268)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHH
T ss_pred ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccch
Confidence 3699999999753211 111 1 67
Q ss_pred HHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCC----CCC-cc---HHHHHHHHcCCCCCCCCcceeeHHHH
Q 025065 101 YSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQP----ILN-FG---AEVILNLINGDQSFAFPYIFVEIRDV 169 (258)
Q Consensus 101 Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~----~~~-~~---~~~~~~~~~g~~~~~~~~~~i~v~D~ 169 (258)
|+.+|...+.+++.++.+ +|+++..+.||.+-.+.... ... .. ...+....... .|..+.+..++|+
T Consensus 160 y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pl~rr~~~p~dv 237 (268)
T d2h7ma1 160 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR--APIGWNMKDATPV 237 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH--CTTCCCTTCCHHH
T ss_pred hhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhc--CCCCCCCCCHHHH
Confidence 999999999999988865 48999999999987542110 000 00 01111111111 1123446789999
Q ss_pred HHHHHHhhcCC--CCCceE-EEeCC
Q 025065 170 VYAHIRALEVP--KASGRY-LLAGS 191 (258)
Q Consensus 170 a~~~~~~~~~~--~~~~~~-~~~~~ 191 (258)
|+++..++... ...|.. .+.|.
T Consensus 238 a~~v~fL~Sd~a~~iTG~~i~vDGG 262 (268)
T d2h7ma1 238 AKTVCALLSDWLPATTGDIIYADGG 262 (268)
T ss_dssp HHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred HHHHHHHhCchhcCccCCEEEECcC
Confidence 99999999542 346644 55443
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.55 E-value=2.1e-14 Score=112.63 Aligned_cols=170 Identities=15% Similarity=0.010 Sum_probs=117.3
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-------CCcE
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-------GCDG 82 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~ 82 (258)
++|||||++.||++++++|.++|++|.+.+|+.+...+ ++.. ...+.++|+++.++++++++ ++|+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~--~~~~-----~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi 74 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE--LEAF-----AETYPQLKPMSEQEPAELIEAVTSAYGQVDV 74 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH--HHHH-----HHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--HHhh-----hCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence 68999999999999999999999999999887654322 2111 11344689999888777654 5899
Q ss_pred EEecCCCCCC-CCC---Cch-----------------------------------------------hhHHHHHHHHHHH
Q 025065 83 VFHTASPVIF-LSD---NPQ-----------------------------------------------EWYSLAKTLAEEA 111 (258)
Q Consensus 83 Vih~a~~~~~-~~~---~~~-----------------------------------------------~~Y~~sK~~~e~~ 111 (258)
+||+||.... ... ... ..|+.+|...+.+
T Consensus 75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l 154 (252)
T d1zmta1 75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL 154 (252)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence 9999987432 111 111 6899999999999
Q ss_pred HHHHHHH---cCCcEEEEcCCccccCCcCCCCC-----ccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC--
Q 025065 112 AWKFAKE---NGIDLVAIHPGTVIGPFFQPILN-----FGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK-- 181 (258)
Q Consensus 112 ~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~-- 181 (258)
.+.++.+ +|+++..+.||.|-.+....... ........+.... ...-+..++|+|.++++++....
T Consensus 155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~----pl~R~g~pedvA~~v~fL~S~~s~~ 230 (252)
T d1zmta1 155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT----ALQRLGTQKELGELVAFLASGSCDY 230 (252)
T ss_dssp HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS----SSSSCBCHHHHHHHHHHHHTTSCGG
T ss_pred HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhcC
Confidence 9998876 48999999999997764332211 1122222222211 22347799999999999996543
Q ss_pred CCceE-EEeC
Q 025065 182 ASGRY-LLAG 190 (258)
Q Consensus 182 ~~~~~-~~~~ 190 (258)
..|.. .++|
T Consensus 231 iTG~~i~vdG 240 (252)
T d1zmta1 231 LTGQVFWLAG 240 (252)
T ss_dssp GTTCEEEEST
T ss_pred CcCCeEEECC
Confidence 46644 4444
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=2.4e-14 Score=113.43 Aligned_cols=160 Identities=16% Similarity=0.081 Sum_probs=112.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-------C
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-------D 78 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~ 78 (258)
+++|++|||||++.||++++++|+++|++|++++|+.+....-..+...........+.+|+.+.+.....+ .
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999999997654322100101111356788889999887665543 3
Q ss_pred CCcEEEecCCCCCCCCC---Cch----------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIFLSD---NPQ----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~~~---~~~----------------------------------------------~~Y~~sK~~~e 109 (258)
..|+++|+|+....... ... ..|+.||...+
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal~ 171 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD 171 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHH
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHHH
Confidence 58999999998543221 111 78999999999
Q ss_pred HHHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCC
Q 025065 110 EAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVP 180 (258)
Q Consensus 110 ~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~ 180 (258)
.+.+.++.+ .++++..+.||.|-.+. ..+...+. ........+++|+.++..+...
T Consensus 172 ~~~~~La~El~~~~~~I~V~~v~PG~v~T~~-----------~~~~~~~~----~~~~~~~~e~~a~~i~~~~~~~ 232 (269)
T d1xu9a_ 172 GFFSSIRKEYSVSRVNVSITLCVLGLIDTET-----------AMKAVSGI----VHMQAAPKEECALEIIKGGALR 232 (269)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-----------HHHHSCGG----GGGGCBCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhcCCCEEEEEEecCcCCCcH-----------HHHhccCC----ccccCCCHHHHHHHHHHHhhcC
Confidence 998888765 36889999999885431 22222221 2223456789999888876654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=1.4e-13 Score=107.77 Aligned_cols=170 Identities=16% Similarity=0.146 Sum_probs=117.0
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-------
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV------- 77 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------- 77 (258)
+.++|.+|||||++.||.+++++|+++|++|++.+|+.+.... ...++ .........|+.+.+.+++..
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA-QAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF 77 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH-HHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHh---CCCccccccccccccccccccccccccc
Confidence 3578999999999999999999999999999999998755432 11222 356788899999876665443
Q ss_pred CCCcEEEecCCCCCCCCC---Cc------h--------------------------------------------------
Q 025065 78 DGCDGVFHTASPVIFLSD---NP------Q-------------------------------------------------- 98 (258)
Q Consensus 78 ~~~d~Vih~a~~~~~~~~---~~------~-------------------------------------------------- 98 (258)
...|.++++++....... .+ .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~ 157 (248)
T d2o23a1 78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 157 (248)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence 257888888776422111 00 0
Q ss_pred ---hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHH
Q 025065 99 ---EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYA 172 (258)
Q Consensus 99 ---~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~ 172 (258)
..|+.+|...+.+++.++.+ +|+++..+.||.+..+....... .....+....++ ...+..++|+|++
T Consensus 158 ~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~---~~~~~~~~~~pl---~~R~g~peevA~~ 231 (248)
T d2o23a1 158 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE---KVCNFLASQVPF---PSRLGDPAEYAHL 231 (248)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCSS---SCSCBCHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCH---HHHHHHHhcCCC---CCCCcCHHHHHHH
Confidence 67999999999999999876 48999999999987664332111 111111111111 1236789999999
Q ss_pred HHHhhcCCCCCc
Q 025065 173 HIRALEVPKASG 184 (258)
Q Consensus 173 ~~~~~~~~~~~~ 184 (258)
+..+++.+...|
T Consensus 232 v~fL~s~~~itG 243 (248)
T d2o23a1 232 VQAIIENPFLNG 243 (248)
T ss_dssp HHHHHHCTTCCS
T ss_pred HHHHHhCCCCCc
Confidence 999998665555
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.55 E-value=1.8e-14 Score=112.06 Aligned_cols=149 Identities=17% Similarity=0.083 Sum_probs=105.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHH-------HhC-
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS-------AVD- 78 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-------~~~- 78 (258)
++|+||||||+|.||++++++|.++|++|.++++...+... ....+..|..+.+.... .+.
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----------ASVIVKMTDSFTEQADQVTAEVGKLLGD 69 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----------EEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----------ccceeecccCcHHHHHHHHHHHHHHhCC
Confidence 47999999999999999999999999999999887654321 22334455554433332 222
Q ss_pred -CCcEEEecCCCCCC-CC--CCch----------------------------------------------hhHHHHHHHH
Q 025065 79 -GCDGVFHTASPVIF-LS--DNPQ----------------------------------------------EWYSLAKTLA 108 (258)
Q Consensus 79 -~~d~Vih~a~~~~~-~~--~~~~----------------------------------------------~~Y~~sK~~~ 108 (258)
++|++||+||.... .. .... ..|+.||...
T Consensus 70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal 149 (236)
T d1dhra_ 70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAV 149 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHH
Confidence 48999999996322 21 1111 6899999999
Q ss_pred HHHHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcCCC
Q 025065 109 EEAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEVPK 181 (258)
Q Consensus 109 e~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 181 (258)
+.+.+.++.+ .|+++..+.||.+..+.. ....... ..-.|+..+|+|+.+..++....
T Consensus 150 ~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~-----------~~~~~~~----~~~~~~~pe~va~~~~~l~s~~~ 212 (236)
T d1dhra_ 150 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------RKSMPEA----DFSSWTPLEFLVETFHDWITGNK 212 (236)
T ss_dssp HHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------HHHSTTS----CGGGSEEHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc-----------hhhCccc----hhhcCCCHHHHHHHHHHHhCCCc
Confidence 9999998865 479999999999975421 1111111 22347889999999999987643
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.53 E-value=4.9e-14 Score=109.49 Aligned_cols=146 Identities=18% Similarity=0.142 Sum_probs=101.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHH-------Hh--C
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS-------AV--D 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-------~~--~ 78 (258)
..|||||||+|.||++++++|.++|++|++++|+..+... ....+.+|.++.+.... .+ .
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----------SNILVDGNKNWTEQEQSILEQTASSLQGS 70 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----------EEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc-----------ccceeccccCchhHHHHHHHHHHHHhcCC
Confidence 3579999999999999999999999999999998754321 22334566655433332 22 2
Q ss_pred CCcEEEecCCCCCC-C--CCCch----------------------------------------------hhHHHHHHHHH
Q 025065 79 GCDGVFHTASPVIF-L--SDNPQ----------------------------------------------EWYSLAKTLAE 109 (258)
Q Consensus 79 ~~d~Vih~a~~~~~-~--~~~~~----------------------------------------------~~Y~~sK~~~e 109 (258)
++|++||+||.... . ..... ..|+.+|.+.+
T Consensus 71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~ 150 (235)
T d1ooea_ 71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVH 150 (235)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHH
Confidence 48999999997432 1 11111 78999999999
Q ss_pred HHHHHHHHH-----cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 110 EAAWKFAKE-----NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 110 ~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+++.++.+ .++++..+.|+.+-.+. ........ ....|+..+|+++.++..+..
T Consensus 151 ~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-----------~~~~~~~~----~~~~~~~~~~va~~~~~~l~~ 210 (235)
T d1ooea_ 151 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----------NRKWMPNA----DHSSWTPLSFISEHLLKWTTE 210 (235)
T ss_dssp HHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----------HHHHSTTC----CGGGCBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccCCCceEEEEEecCcCcCcc-----------hhhhCcCC----ccccCCCHHHHHHHHHHHhcC
Confidence 999998865 36788889999875432 22222221 234577899999998765544
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.52 E-value=1.9e-13 Score=107.41 Aligned_cols=162 Identities=17% Similarity=0.077 Sum_probs=101.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh--------CC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV--------DG 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~ 79 (258)
||.||||||++.||++++++|+++|++|++++|+..+. ..|+.+.+...... ..
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~------------------~~d~~~~~~~~~~~~~~~~~~~~~ 62 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------------------IADLSTAEGRKQAIADVLAKCSKG 62 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------------------ECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH------------------HHHhcCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999875432 24555554333221 24
Q ss_pred CcEEEecCCCCCCCCCCch-------------------------------------------------------------
Q 025065 80 CDGVFHTASPVIFLSDNPQ------------------------------------------------------------- 98 (258)
Q Consensus 80 ~d~Vih~a~~~~~~~~~~~------------------------------------------------------------- 98 (258)
.|+++|+|+..........
T Consensus 63 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~ 142 (257)
T d1fjha_ 63 MDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAI 142 (257)
T ss_dssp CSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHH
T ss_pred CcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeee
Confidence 7999999886432211000
Q ss_pred ----------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceee
Q 025065 99 ----------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVE 165 (258)
Q Consensus 99 ----------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~ 165 (258)
..|+.+|...+.+.+.++.+ +|+++..+.||.+-.+........ ........... . +..-+..
T Consensus 143 ~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~~--~-PlgR~g~ 218 (257)
T d1fjha_ 143 VEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD-PRYGESIAKFV--P-PMGRRAE 218 (257)
T ss_dssp HHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CC--C-STTSCCC
T ss_pred hhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC-HHHHHHHHhcC--C-CCCCCcC
Confidence 25999999999999888755 589999999999976643221110 00111111111 1 2234678
Q ss_pred HHHHHHHHHHhhcCC--CCCceE-EEeCC
Q 025065 166 IRDVVYAHIRALEVP--KASGRY-LLAGS 191 (258)
Q Consensus 166 v~D~a~~~~~~~~~~--~~~~~~-~~~~~ 191 (258)
++|+|.++..++... ...|.. .++|.
T Consensus 219 p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 219 PSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp THHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 999999999998643 356744 45443
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.51 E-value=6e-13 Score=105.02 Aligned_cols=174 Identities=19% Similarity=0.154 Sum_probs=116.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHH----H-------H
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFD----S-------A 76 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~----~-------~ 76 (258)
...|||||++.||++++++|+++|++|++.+|+.++.......++.. ........+.|..+....+ + .
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999865432211111111 1345677777776543322 2 2
Q ss_pred hCCCcEEEecCCCCCCCCCCch----------------------------------------------------------
Q 025065 77 VDGCDGVFHTASPVIFLSDNPQ---------------------------------------------------------- 98 (258)
Q Consensus 77 ~~~~d~Vih~a~~~~~~~~~~~---------------------------------------------------------- 98 (258)
+.++|++||+||..........
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 3469999999998543211100
Q ss_pred --------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHH
Q 025065 99 --------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIR 167 (258)
Q Consensus 99 --------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~ 167 (258)
..|+.+|...+.+.+.++.+ +|+++..+.||.+..+... .......+....+ ..+-+..++
T Consensus 162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~-----~~~~~~~~~~~~p---l~r~~~~pe 233 (266)
T d1mxha_ 162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM-----PQETQEEYRRKVP---LGQSEASAA 233 (266)
T ss_dssp GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS-----CHHHHHHHHTTCT---TTSCCBCHH
T ss_pred ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC-----CHHHHHHHHhcCC---CCCCCCCHH
Confidence 67999999999999888875 5899999999998765322 1223333333211 113356899
Q ss_pred HHHHHHHHhhcCC--CCCce-EEEeC
Q 025065 168 DVVYAHIRALEVP--KASGR-YLLAG 190 (258)
Q Consensus 168 D~a~~~~~~~~~~--~~~~~-~~~~~ 190 (258)
|+|.+++.++... ...|. +.++|
T Consensus 234 eva~~v~fL~s~~s~~itG~~i~vDG 259 (266)
T d1mxha_ 234 QIADAIAFLVSKDAGYITGTTLKVDG 259 (266)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHhCchhCCccCCeEEECc
Confidence 9999999999754 35674 45554
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.48 E-value=6.5e-13 Score=105.86 Aligned_cols=175 Identities=18% Similarity=0.069 Sum_probs=112.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCc-----------------EEEEEccCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATER-----------------LHLFKANLLE 69 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~-----------------~~~~~~Dl~~ 69 (258)
+..+|||||++.||++++++|+++|++|++.+++..+.......++.. .+.. .....+|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 457899999999999999999999999999887654322111111110 0122 3334566777
Q ss_pred cccHHHHh-------CCCcEEEecCCCCCCCCC--------Cc-------------------------------------
Q 025065 70 EGSFDSAV-------DGCDGVFHTASPVIFLSD--------NP------------------------------------- 97 (258)
Q Consensus 70 ~~~~~~~~-------~~~d~Vih~a~~~~~~~~--------~~------------------------------------- 97 (258)
.+++++++ .++|++||+||....... +.
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 77777654 368999999998532110 00
Q ss_pred -h------------------------hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHH
Q 025065 98 -Q------------------------EWYSLAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILN 149 (258)
Q Consensus 98 -~------------------------~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~ 149 (258)
. ..|+.+|...+.+.+.++.+ +|+++..+.||.+-... .........
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~-----~~~~~~~~~ 236 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-----DMPPAVWEG 236 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-----GSCHHHHHH
T ss_pred HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc-----cCCHHHHHH
Confidence 0 57999999999999998875 48999999999642221 112233444
Q ss_pred HHcCCCCCCCCcceeeHHHHHHHHHHhhcCC--CCCceE-EEeC
Q 025065 150 LINGDQSFAFPYIFVEIRDVVYAHIRALEVP--KASGRY-LLAG 190 (258)
Q Consensus 150 ~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~~~~ 190 (258)
.....++ ...+..++|+|++++.++... ...|.. .++|
T Consensus 237 ~~~~~pl---~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDG 277 (284)
T d1e7wa_ 237 HRSKVPL---YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 277 (284)
T ss_dssp HHTTCTT---TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHhcCCC---CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECc
Confidence 3333221 124668999999999998643 346644 4443
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.48 E-value=1e-12 Score=102.15 Aligned_cols=163 Identities=20% Similarity=0.153 Sum_probs=113.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC------CCcE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD------GCDG 82 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~ 82 (258)
|++|||||++.||++++++|+++|++|++.+|+.+.. +....++|+++......+.. ..+.
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 68 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------------DLIYVEGDVTREEDVRRAVARAQEEAPLFA 68 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-------------SSEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-------------cceEeeccccchhhhHHHHHhhhccccccc
Confidence 7899999999999999999999999999999976442 34567888888766555432 3455
Q ss_pred EEecCCCCCCC-C------CCch-----------------------------------------------------hhHH
Q 025065 83 VFHTASPVIFL-S------DNPQ-----------------------------------------------------EWYS 102 (258)
Q Consensus 83 Vih~a~~~~~~-~------~~~~-----------------------------------------------------~~Y~ 102 (258)
+++.++..... . .... ..|+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~ 148 (241)
T d1uaya_ 69 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYA 148 (241)
T ss_dssp EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHH
T ss_pred hhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhH
Confidence 55555442111 0 0000 7899
Q ss_pred HHHHHHHHHHHHHHHH---cCCcEEEEcCCccccCCcCCCCCccHHHHHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC
Q 025065 103 LAKTLAEEAAWKFAKE---NGIDLVAIHPGTVIGPFFQPILNFGAEVILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV 179 (258)
Q Consensus 103 ~sK~~~e~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~ 179 (258)
.+|...+.+++.++.+ +|+++..+.||.+..+..... ............++. ..+..++|+|.++..++..
T Consensus 149 asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~~~---~R~g~pedvA~~v~fL~s~ 222 (241)
T d1uaya_ 149 ASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPFP---PRLGRPEEYAALVLHILEN 222 (241)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCSS---CSCCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh---hhhHHHHHHhcCCCC---CCCcCHHHHHHHHHHHHhC
Confidence 9999999999998876 589999999999976643322 122222323322211 2356899999999999987
Q ss_pred CCCCceE-EEeC
Q 025065 180 PKASGRY-LLAG 190 (258)
Q Consensus 180 ~~~~~~~-~~~~ 190 (258)
....|.. .++|
T Consensus 223 ~~iTG~~i~VDG 234 (241)
T d1uaya_ 223 PMLNGEVVRLDG 234 (241)
T ss_dssp TTCCSCEEEEST
T ss_pred CCCCCCEEEECC
Confidence 6667744 4544
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.48 E-value=3.9e-12 Score=101.91 Aligned_cols=184 Identities=14% Similarity=0.035 Sum_probs=111.7
Q ss_pred CCCCCCCcEEEEECCcc--hHHHHHHHHHHHCCCEEEEEEcCCCCccc-----------hhhccccCcC--CcEEEEEcc
Q 025065 2 MSGEGEEKVVCVTGASG--FVASWLVKLLLQRGYTVKATVRDPNSPKT-----------EHLRELDGAT--ERLHLFKAN 66 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~--~~~~~~~~D 66 (258)
|...+++|++|||||+| .||.+++++|+++|.+|++.+|++..... .......... .++..+..+
T Consensus 2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
T d1d7oa_ 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 56677899999999987 89999999999999999998875321100 0000000000 012222222
Q ss_pred C------------------CCcccHHHH-------hCCCcEEEecCCCCCCCC-----CCch------------------
Q 025065 67 L------------------LEEGSFDSA-------VDGCDGVFHTASPVIFLS-----DNPQ------------------ 98 (258)
Q Consensus 67 l------------------~~~~~~~~~-------~~~~d~Vih~a~~~~~~~-----~~~~------------------ 98 (258)
+ .+....+++ +.++|++||+||...... ....
T Consensus 82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~ 161 (297)
T d1d7oa_ 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence 2 223233332 346899999999743211 1111
Q ss_pred ----------------------------hhHHHHHHHHHHHHHHHHH----HcCCcEEEEcCCccccCCcCCCCCccHHH
Q 025065 99 ----------------------------EWYSLAKTLAEEAAWKFAK----ENGIDLVAIHPGTVIGPFFQPILNFGAEV 146 (258)
Q Consensus 99 ----------------------------~~Y~~sK~~~e~~~~~~~~----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~ 146 (258)
..|..+|...+.+++.++. ++|+++..+.||.+..+..... ......
T Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-~~~~~~ 240 (297)
T d1d7oa_ 162 HFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-GFIDTM 240 (297)
T ss_dssp HHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-SHHHHH
T ss_pred HHHHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhc-cCCHHH
Confidence 5799999988877665543 4589999999999987754322 111222
Q ss_pred HHHHHcCCCCCCCCcceeeHHHHHHHHHHhhcC--CCCCceE-EEeC
Q 025065 147 ILNLINGDQSFAFPYIFVEIRDVVYAHIRALEV--PKASGRY-LLAG 190 (258)
Q Consensus 147 ~~~~~~g~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~~~-~~~~ 190 (258)
........ +...+..++|+|.+++.++.. ....|.. .++|
T Consensus 241 ~~~~~~~~----PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDG 283 (297)
T d1d7oa_ 241 IEYSYNNA----PIQKTLTADEVGNAAAFLVSPLASAITGATIYVDN 283 (297)
T ss_dssp HHHHHHHS----SSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHhCC----CCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence 22222221 123477899999999999964 3356744 4444
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.41 E-value=1.1e-13 Score=103.92 Aligned_cols=81 Identities=20% Similarity=0.208 Sum_probs=67.5
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
.+++|+|+||||+|.||+.+++.|+++|++|++++|+.++... +.+.. ..++....+|+++.+++++.+.++|+
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~iDi 95 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK----RFKVNVTAAETADDASRAEAVKGAHF 95 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH----HHTCCCEEEECCSHHHHHHHTTTCSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHh----ccchhhhhhhcccHHHHHHHhcCcCe
Confidence 4688999999999999999999999999999999998755422 11111 13456788999999999999999999
Q ss_pred EEecCCC
Q 025065 83 VFHTASP 89 (258)
Q Consensus 83 Vih~a~~ 89 (258)
|||+|+.
T Consensus 96 lin~Ag~ 102 (191)
T d1luaa1 96 VFTAGAI 102 (191)
T ss_dssp EEECCCT
T ss_pred eeecCcc
Confidence 9999986
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.14 E-value=2.1e-09 Score=86.94 Aligned_cols=126 Identities=15% Similarity=0.159 Sum_probs=82.9
Q ss_pred CcEEEEEC--CcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-----------hhhccccCcCCcEEEEE----------
Q 025065 8 EKVVCVTG--ASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-----------EHLRELDGATERLHLFK---------- 64 (258)
Q Consensus 8 ~~~ilItG--a~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~~~~~~~---------- 64 (258)
+|..|||| ++..||..++++|.++|.+|.+.++....... .................
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence 57899999 55799999999999999999988765421110 00000000011122222
Q ss_pred ----------ccCCCcccHHHHh-------CCCcEEEecCCCCCCCCCC-----ch------------------------
Q 025065 65 ----------ANLLEEGSFDSAV-------DGCDGVFHTASPVIFLSDN-----PQ------------------------ 98 (258)
Q Consensus 65 ----------~Dl~~~~~~~~~~-------~~~d~Vih~a~~~~~~~~~-----~~------------------------ 98 (258)
+|+.+.+.+++++ .++|++||+||........ ..
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m 161 (329)
T d1uh5a_ 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence 3555666666544 3689999999975431111 11
Q ss_pred ----------------------hhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCcccc
Q 025065 99 ----------------------EWYSLAKTLAEEAAWKFAKE----NGIDLVAIHPGTVIG 133 (258)
Q Consensus 99 ----------------------~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilRp~~v~G 133 (258)
+.|+.+|...+.+++.++.+ +|+++..+.||.|-.
T Consensus 162 ~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred ccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 35899999999998887753 589999999998854
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.70 E-value=5.4e-08 Score=67.69 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=58.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a 87 (258)
|+|+|+|+ |.+|+.|++.|.++|++|++++++++... .+.. ..+...+.||.++++.+.++ ++.+|.++-+.
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~--~~~~----~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t 73 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK--KASA----EIDALVINGDCTKIKTLEDAGIEDADMYIAVT 73 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHH----HCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhh--hhhh----hhhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence 58999998 99999999999999999999998764332 1111 12568899999999999887 47799988654
Q ss_pred CC
Q 025065 88 SP 89 (258)
Q Consensus 88 ~~ 89 (258)
..
T Consensus 74 ~~ 75 (132)
T d1lssa_ 74 GK 75 (132)
T ss_dssp SC
T ss_pred Cc
Confidence 33
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.48 E-value=2.1e-07 Score=67.89 Aligned_cols=75 Identities=23% Similarity=0.322 Sum_probs=56.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
.|+|+|.|| |++|+.++++|.++||+|++++|+...... +............+..+.......+...|.++.+.
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~-----l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~ 75 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKK-----LSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI 75 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHH-----HHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHH-----HHhcccccccccccccchhhhHhhhhccceeEeec
Confidence 589999997 999999999999999999999998754422 11112345556667777777778888889888654
Q ss_pred C
Q 025065 88 S 88 (258)
Q Consensus 88 ~ 88 (258)
.
T Consensus 76 ~ 76 (182)
T d1e5qa1 76 P 76 (182)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.33 E-value=6.7e-07 Score=62.07 Aligned_cols=99 Identities=21% Similarity=0.125 Sum_probs=68.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a 87 (258)
|+++|.|+ |.+|+++++.|.+.|++|++++.++... +.+. ..+...+.+|.++++.+.++ +.++|.||=+.
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~-----~~~~--~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~ 72 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV-----NAYA--SYATHAVIANATEENELLSLGIRNFEYVIVAI 72 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH-----HHTT--TTCSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHH-----HHHH--HhCCcceeeecccchhhhccCCccccEEEEEc
Confidence 56889987 9999999999999999999999876432 2222 13567788999999999887 67899887444
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 88 SPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 88 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
... . .....+...++..+..-++.|...
T Consensus 73 ~~~-----------~----~~~~~~~~~~~~~~~~~iiar~~~ 100 (134)
T d2hmva1 73 GAN-----------I----QASTLTTLLLKELDIPNIWVKAQN 100 (134)
T ss_dssp CSC-----------H----HHHHHHHHHHHHTTCSEEEEECCS
T ss_pred Cch-----------H----HhHHHHHHHHHHcCCCcEEeeccc
Confidence 331 0 111122223455566777777654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.16 E-value=9.3e-06 Score=56.70 Aligned_cols=114 Identities=17% Similarity=0.114 Sum_probs=67.3
Q ss_pred EEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
||.|+||+|.+|++++..|..+| -+++.++.+.......-+.... . ...... .....+..+.++++|+||.+|
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~---~-~~~~~~-~~~~~~~~~~~~~aDivVita 76 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIE---T-RATVKG-YLGPEQLPDCLKGCDVVVIPA 76 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSS---S-SCEEEE-EESGGGHHHHHTTCSEEEECC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhh---h-hcCCCe-EEcCCChHHHhCCCCEEEECC
Confidence 79999999999999999999888 4788888654221111111111 1 111111 123455677889999999999
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCC
Q 025065 88 SPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPG 129 (258)
Q Consensus 88 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~ 129 (258)
|....................++..... .+++.+..++=.+
T Consensus 77 g~~~~~g~sR~~ll~~N~~i~~~i~~~i-~~~~p~~iiivvt 117 (144)
T d1mlda1 77 GVPRKPGMTRDDLFNTNATIVATLTAAC-AQHCPDAMICIIS 117 (144)
T ss_dssp SCCCCTTCCGGGGHHHHHHHHHHHHHHH-HHHCTTSEEEECS
T ss_pred CcCCCCCCCcchHHHHHHHHHHHHHHHH-HhcCCCeEEEEec
Confidence 9754333333333444444445555443 3445555555433
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=98.14 E-value=2.8e-06 Score=60.15 Aligned_cols=39 Identities=15% Similarity=0.317 Sum_probs=35.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
.++||.|+||.|.+|+.+++.|.++||+|++.+|+....
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~ 46 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV 46 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence 578999999999999999999999999999999876443
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=98.13 E-value=7.1e-06 Score=54.57 Aligned_cols=68 Identities=16% Similarity=0.148 Sum_probs=54.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGVF 84 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 84 (258)
...||.|.|| |.+|+-++.+..+.|++|++++.++..+... -.-.++.+|+.|.+.+.++.. ++|+|-
T Consensus 10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~---------va~~~i~~~~~d~~~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH---------VAHRSHVINMLDGDALRRVVELEKPHYIV 79 (111)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG---------GSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhh---------cCCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence 3468999997 9999999999999999999999876654221 123678899999999988774 578885
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.02 E-value=1.1e-05 Score=56.41 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=57.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC----CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG----YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
||||.|.||||++|+.+++.|+++. .+++++.++........... . .....++.+. ..+.++|+|
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~-----~--~~~~~~~~~~----~~~~~~Div 69 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGG-----T--TGTLQDAFDL----EALKALDII 69 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGT-----C--CCBCEETTCH----HHHHTCSEE
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccC-----C--ceeeecccch----hhhhcCcEE
Confidence 4689999999999999999988763 35676665544332211100 0 0111122221 235789999
Q ss_pred EecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCccc
Q 025065 84 FHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVI 132 (258)
Q Consensus 84 ih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~ 132 (258)
+.+++. +.++..+.++ . +.|.+.+++-.+.-|
T Consensus 70 F~a~~~------------~~s~~~~~~~----~-~~g~~~~VID~Ss~f 101 (146)
T d1t4ba1 70 VTCQGG------------DYTNEIYPKL----R-ESGWQGYWIDAASSL 101 (146)
T ss_dssp EECSCH------------HHHHHHHHHH----H-HTTCCCEEEECSSTT
T ss_pred EEecCc------------hHHHHhhHHH----H-hcCCCeecccCCccc
Confidence 988765 5555554444 2 347776666665554
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.01 E-value=2.2e-06 Score=63.15 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=32.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
|||.|+||+|.+|+.|++.|.++||+|++.+|++++
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~ 36 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK 36 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 579999999999999999999999999999997644
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=1e-05 Score=60.80 Aligned_cols=75 Identities=12% Similarity=0.091 Sum_probs=54.4
Q ss_pred CCCcEEEEECC----------------cchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC
Q 025065 6 GEEKVVCVTGA----------------SGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE 69 (258)
Q Consensus 6 ~~~~~ilItGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 69 (258)
+++++||||+| ||..|.+|++++..+|++|+++.-...... +.++..+.. .+
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~----------p~~~~~~~~--~t 71 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT----------PPFVKRVDV--MT 71 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC----------CTTEEEEEC--CS
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc----------cccccccee--hh
Confidence 57899999975 799999999999999999999876443221 234555443 33
Q ss_pred cccH----HHHhCCCcEEEecCCCCCC
Q 025065 70 EGSF----DSAVDGCDGVFHTASPVIF 92 (258)
Q Consensus 70 ~~~~----~~~~~~~d~Vih~a~~~~~ 92 (258)
.+++ .+.+..+|++|++|+...+
T Consensus 72 ~~~m~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 72 ALEMEAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp HHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred hHHHHHHHHhhhccceeEeeeechhhh
Confidence 3333 3445679999999999755
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.00 E-value=6.6e-05 Score=52.27 Aligned_cols=112 Identities=20% Similarity=0.108 Sum_probs=63.2
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccch----hhcc-ccCcCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTE----HLRE-LDGATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~----~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
|||.|+||+|.+|+.++..|..++ .++..+++++.....+ -+.. ......+.+....--.+. +.++++|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence 579999999999999999999988 5899888764322111 1111 111122233322111121 3577899
Q ss_pred EEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEE
Q 025065 82 GVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVA 125 (258)
Q Consensus 82 ~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i 125 (258)
+||-+||.....................+.+.... +++...++
T Consensus 77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~-~~~~~~ii 119 (145)
T d1hyea1 77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIA-EICDTKIF 119 (145)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHH-HHCCCEEE
T ss_pred EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHh-ccCCCeEE
Confidence 99999998543333323333334444455555543 33434433
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.00 E-value=6.3e-05 Score=52.65 Aligned_cols=78 Identities=18% Similarity=0.188 Sum_probs=51.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchh--hcccc-CcCCcEEEEEccCCCcccHHHHhCCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEH--LRELD-GATERLHLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d 81 (258)
.++||.|+|+ |++|+.++..|..++. ++..+++++....... +.... ...........|. +.+.++|
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD 76 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD 76 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence 4689999997 9999999999998874 7988887654322111 11111 1122333333432 3477899
Q ss_pred EEEecCCCCCC
Q 025065 82 GVFHTASPVIF 92 (258)
Q Consensus 82 ~Vih~a~~~~~ 92 (258)
+||.+++....
T Consensus 77 vvvitag~~~~ 87 (148)
T d1ldna1 77 LVVICAGANQK 87 (148)
T ss_dssp EEEECCSCCCC
T ss_pred eEEEecccccc
Confidence 99999998543
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.97 E-value=2.9e-05 Score=54.24 Aligned_cols=111 Identities=14% Similarity=0.139 Sum_probs=61.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchh--hccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEH--LRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
+.|||.|+|+ |++|+.++..|..+| .+|+.++++....+... +..............+|. + .+.++|+
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~~adi 75 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCKDADL 75 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----HhccccE
Confidence 3579999996 999999999999987 68999998654322111 111111112233444443 2 3678999
Q ss_pred EEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 83 VFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 83 Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
|+.+|+.....................+.+.... +++.+..++
T Consensus 76 vvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~-~~~p~aivi 118 (146)
T d1ez4a1 76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVV-DSGFDGIFL 118 (146)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHH-HTTCCSEEE
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHHHHHHHHh-hcCCCcEEE
Confidence 9999987543222222333444444445544444 444444444
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.96 E-value=9.9e-06 Score=57.94 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=33.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
|||+|+|+ |.+|+.++..|.+.|++|++++|++...
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~ 36 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY 36 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence 58999998 9999999999999999999999987654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.93 E-value=5.9e-06 Score=60.19 Aligned_cols=79 Identities=19% Similarity=0.082 Sum_probs=50.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
|||.|+|+ |-+|..++..|.++||+|++++|++..... ..........+.............+..+.++++|+||-+.
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v 80 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 80 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence 78999998 999999999999999999999987543211 0000000001112222222222345788899999999765
Q ss_pred C
Q 025065 88 S 88 (258)
Q Consensus 88 ~ 88 (258)
-
T Consensus 81 ~ 81 (184)
T d1bg6a2 81 P 81 (184)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.82 E-value=2e-05 Score=57.35 Aligned_cols=82 Identities=13% Similarity=0.093 Sum_probs=60.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc-hh-hccccCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT-EH-LRELDGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
.++++|+|+|+ |..|++++.+|.+.|. ++++++|+++.... .. .+.+.. .........|+.+.+.+...+..+|+
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~di 93 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-NTDCVVTVTDLADQQAFAEALASADI 93 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-HSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh-hcCcceEeeecccccchhhhhcccce
Confidence 46789999998 8889999999999985 78889988765432 11 111110 12234556888888888888889999
Q ss_pred EEecCCC
Q 025065 83 VFHTASP 89 (258)
Q Consensus 83 Vih~a~~ 89 (258)
|||+...
T Consensus 94 iIN~Tp~ 100 (182)
T d1vi2a1 94 LTNGTKV 100 (182)
T ss_dssp EEECSST
T ss_pred eccccCC
Confidence 9999865
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.81 E-value=0.00044 Score=47.94 Aligned_cols=112 Identities=15% Similarity=0.108 Sum_probs=59.8
Q ss_pred cEEEEECCcchHHHHHHHHHHH-CC--CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 9 KVVCVTGASGFVASWLVKLLLQ-RG--YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~-~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
|||.|+|++|.+|++++..|.. .+ .++..++..+ ......+ .+........... +....++ +.++++|+||-
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~-Dl~h~~~~~~~~~--~~~~~~~-~~~~~aDvvvi 75 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAV-DLSHIPTAVKIKG--FSGEDAT-PALEGADVVLI 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHH-HHHTSCSSCEEEE--ECSSCCH-HHHTTCSEEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHH-HHHCCccccCCcE--EEcCCCc-cccCCCCEEEE
Confidence 5899999999999999998864 34 6888888643 2211111 1111111111111 1222334 36789999999
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 86 TASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 86 ~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
+||.....................+...... +++.+.+++
T Consensus 76 taG~~~k~g~~R~dl~~~N~~i~~~v~~~i~-~~~p~aivi 115 (145)
T d2cmda1 76 SAGVRRKPGMDRSDLFNVNAGIVKNLVQQVA-KTCPKACIG 115 (145)
T ss_dssp CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHH-HHCTTSEEE
T ss_pred CCCccCCCCcchhhHHHHHHHHHHHHHHHHH-hhCCCcEEE
Confidence 9998643333323333333333344444333 334444333
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.75 E-value=0.00024 Score=47.09 Aligned_cols=73 Identities=19% Similarity=0.174 Sum_probs=51.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.++++|||.|+ |-+|..-++.|++.|.+|++++....+....... ..+++++..+..+. .+.+++.|+-
T Consensus 10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~-----dl~~~~lv~~ 78 (113)
T d1pjqa1 10 LRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-----EGMLTLVEGPFDET-----LLDSCWLAIA 78 (113)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-----TTSCEEEESSCCGG-----GGTTCSEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-----cCCceeeccCCCHH-----HhCCCcEEee
Confidence 46899999998 9999999999999999999987655432211111 24577777665543 3567888886
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.+.
T Consensus 79 at~d 82 (113)
T d1pjqa1 79 ATDD 82 (113)
T ss_dssp CCSC
T ss_pred cCCC
Confidence 5544
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.74 E-value=0.00015 Score=51.08 Aligned_cols=81 Identities=20% Similarity=0.087 Sum_probs=46.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC----E-E--EEEEcCCCCccchhh-ccccC-cCCcEEEEEccCCCcccHHHHhC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY----T-V--KATVRDPNSPKTEHL-RELDG-ATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~----~-V--~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
.+||.|+||+|++|++++..|...+. + + ..+.-.......+.. ..+.. .......+.. .....+.++
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 79 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEA----TDDPKVAFK 79 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccccccccccc----CCchhhhcc
Confidence 57999999999999999999987652 1 1 222111111111100 00000 0122222222 234557889
Q ss_pred CCcEEEecCCCCCC
Q 025065 79 GCDGVFHTASPVIF 92 (258)
Q Consensus 79 ~~d~Vih~a~~~~~ 92 (258)
++|+||-++|....
T Consensus 80 ~advViitaG~~~~ 93 (154)
T d1y7ta1 80 DADYALLVGAAPRK 93 (154)
T ss_dssp TCSEEEECCCCCCC
T ss_pred cccEEEeecCcCCC
Confidence 99999999998654
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.74 E-value=2.1e-05 Score=55.90 Aligned_cols=73 Identities=22% Similarity=0.204 Sum_probs=53.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.++++|||+|+ |-+|+.+++.|.+.|. ++++..|+..+... ..... +.. ..+.+++.+.+.++|+||
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~-l~~~~-----~~~-----~~~~~~~~~~l~~~Divi 89 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVE-LARDL-----GGE-----AVRFDELVDHLARSDVVV 89 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHH-HHHHH-----TCE-----ECCGGGHHHHHHTCSEEE
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHH-HHHhh-----hcc-----cccchhHHHHhccCCEEE
Confidence 46789999998 9999999999999996 68888887543321 11111 112 234467888889999999
Q ss_pred ecCCCC
Q 025065 85 HTASPV 90 (258)
Q Consensus 85 h~a~~~ 90 (258)
.+.+..
T Consensus 90 ~atss~ 95 (159)
T d1gpja2 90 SATAAP 95 (159)
T ss_dssp ECCSSS
T ss_pred EecCCC
Confidence 998863
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.72 E-value=4.9e-05 Score=53.59 Aligned_cols=118 Identities=16% Similarity=0.157 Sum_probs=65.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhc--cccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLR--ELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
+.+||.|+|+ |.+|+.++..|...+. ++..++.++......... ..... .+ ....+......++.++++|+|
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~-~~---~~~~~~~~~~~~~~~~~adiV 80 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSV-VD---TNVSVRAEYSYEAALTGADCV 80 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHH-TT---CCCCEEEECSHHHHHTTCSEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccc-cC---CeeEEeccCchhhhhcCCCeE
Confidence 4689999998 9999999998887774 888888766432211111 00000 00 001111123456788999999
Q ss_pred EecCCCCCCCCC-----CchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCc
Q 025065 84 FHTASPVIFLSD-----NPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGT 130 (258)
Q Consensus 84 ih~a~~~~~~~~-----~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~ 130 (258)
+-+++....... .....+........+.+.... +++.+..++=.++
T Consensus 81 vitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~-~~~p~aiviivsN 131 (154)
T d1pzga1 81 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIK-KYCPKTFIIVVTN 131 (154)
T ss_dssp EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHH-HHCTTCEEEECCS
T ss_pred EEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHH-hcCCCcEEEEeCC
Confidence 999998543221 111333333344455555433 4455555554443
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.72 E-value=3.8e-05 Score=54.14 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=58.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEec
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHT 86 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~ 86 (258)
..+|+|.|. |-+|+.+++.|.++|++|++++.++..... ...... ..++.++.||.++++.++++ ++++|+||-+
T Consensus 3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~-~~~~~~--~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~ 78 (153)
T d1id1a_ 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIK-QLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHH-HHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHH-HHHHhh--cCCcEEEEccCcchHHHHHhccccCCEEEEc
Confidence 346999998 999999999999999999999876643221 111111 25789999999999988765 4679999865
Q ss_pred CC
Q 025065 87 AS 88 (258)
Q Consensus 87 a~ 88 (258)
..
T Consensus 79 ~~ 80 (153)
T d1id1a_ 79 SD 80 (153)
T ss_dssp SS
T ss_pred cc
Confidence 54
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.72 E-value=3.1e-05 Score=56.27 Aligned_cols=75 Identities=21% Similarity=0.270 Sum_probs=51.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-----CCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~d 81 (258)
++.+|||+||+|.+|+..++-....|.+|+++++++++. +...+. +.+.+ .|..+.+..+.+. .++|
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~--~~~~~~-----Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd 100 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI--AYLKQI-----GFDAA-FNYKTVNSLEEALKKASPDGYD 100 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT-----TCSEE-EETTSCSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH--HHHHhh-----hhhhh-cccccccHHHHHHHHhhcCCCc
Confidence 467999999999999999999999999999999875432 222221 12222 3444444444333 3599
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+|+++.|-
T Consensus 101 ~v~D~vG~ 108 (182)
T d1v3va2 101 CYFDNVGG 108 (182)
T ss_dssp EEEESSCH
T ss_pred eeEEecCc
Confidence 99999875
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.71 E-value=2.8e-05 Score=56.01 Aligned_cols=74 Identities=22% Similarity=0.133 Sum_probs=50.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+.+|||+||+|-+|...++.+...|.+|+++++++++. +...++ +.+.+ .|..+.........++|+|+++
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~--~~~~~l-----Ga~~~-i~~~~~~~~~~~~~g~D~v~d~ 98 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL--ALPLAL-----GAEEA-ATYAEVPERAKAWGGLDLVLEV 98 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS--HHHHHT-----TCSEE-EEGGGHHHHHHHTTSEEEEEEC
T ss_pred CCCEEEEEeccccchhhhhhhhccccccccccccccccc--cccccc-----cccee-eehhhhhhhhhccccccccccc
Confidence 467899999999999999999999999999998875433 222222 12221 2333322222334579999998
Q ss_pred CC
Q 025065 87 AS 88 (258)
Q Consensus 87 a~ 88 (258)
+|
T Consensus 99 ~G 100 (171)
T d1iz0a2 99 RG 100 (171)
T ss_dssp SC
T ss_pred cc
Confidence 76
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.70 E-value=7.1e-06 Score=60.20 Aligned_cols=78 Identities=14% Similarity=0.098 Sum_probs=50.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccc---cCcCCcEEEEEccCCCcccHHHHhCCCcE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLREL---DGATERLHLFKANLLEEGSFDSAVDGCDG 82 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 82 (258)
|.|+||.|.|| |-.|.+++..|.+.|++|++.+|+++.... +... ....+++.+ .-++.-..++.++++++|+
T Consensus 5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~--i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~ 80 (189)
T d1n1ea2 5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRL--VNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEI 80 (189)
T ss_dssp CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHH--HHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSC
T ss_pred ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHH--Hhhccccccccccccc-ccccccchhhhhccCCCCE
Confidence 45678999998 999999999999999999999986532211 1100 000011111 1122223568889999999
Q ss_pred EEecC
Q 025065 83 VFHTA 87 (258)
Q Consensus 83 Vih~a 87 (258)
|+-+.
T Consensus 81 iiiav 85 (189)
T d1n1ea2 81 ILFVI 85 (189)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 98654
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.67 E-value=2.4e-05 Score=54.63 Aligned_cols=35 Identities=31% Similarity=0.363 Sum_probs=27.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC---EEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY---TVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~---~V~~~~r~~ 42 (258)
.++|.|.||||++|++|++.|.+++| ++..+..+.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~ 39 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE 39 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence 47899999999999999999986653 666665443
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.66 E-value=0.0001 Score=53.00 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=28.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRD 41 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~ 41 (258)
|+||.|.||||++|++|++.|.+.. .++..+..+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~ 35 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence 4789999999999999999999865 477666533
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.66 E-value=0.00011 Score=51.10 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=25.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC----CEEEEEEcC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG----YTVKATVRD 41 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g----~~V~~~~r~ 41 (258)
|||.|.||||++|++|++.|+++. .++..+..+
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~ 37 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS 37 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence 579999999999999999988753 355555443
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.65 E-value=1.7e-05 Score=56.76 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=30.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
|||.|.|. |.+|+.+++.|.++||+|++++|+++
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~ 34 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQS 34 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCch
Confidence 57999987 99999999999999999999998753
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.63 E-value=0.00014 Score=46.49 Aligned_cols=73 Identities=21% Similarity=0.238 Sum_probs=51.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.++|+|+|.|. |--|.++++.|.++|++|++.+.+..+.....+. ....++.+... ...+.++|.||-
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~------~~~~~~~~~~~-----~~~~~~~d~vi~ 70 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP------EAVERHTGSLN-----DEWLMAADLIVA 70 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSC------TTSCEEESBCC-----HHHHHHCSEEEE
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHh------hccceeecccc-----hhhhccCCEEEE
Confidence 57899999998 8899999999999999999999876554332221 23344444321 234567899998
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
.-|+.
T Consensus 71 SPGi~ 75 (93)
T d2jfga1 71 SPGIA 75 (93)
T ss_dssp CTTSC
T ss_pred CCCCC
Confidence 77763
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.61 E-value=0.00091 Score=46.11 Aligned_cols=75 Identities=20% Similarity=0.170 Sum_probs=46.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhc--cccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLR--ELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+||.|+|+ |.+|+.++..|..++ .++..++++........++ .............+| . +.++++|+|+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv 73 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y----SDVKDCDVIV 73 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G----GGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H----HHhCCCceEE
Confidence 57999997 999999999999987 4899999877654332221 111112223322222 2 3477899999
Q ss_pred ecCCCCC
Q 025065 85 HTASPVI 91 (258)
Q Consensus 85 h~a~~~~ 91 (258)
-+|+...
T Consensus 74 itag~~~ 80 (142)
T d1y6ja1 74 VTAGANR 80 (142)
T ss_dssp ECCCC--
T ss_pred Eeccccc
Confidence 9999754
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.60 E-value=0.00046 Score=47.64 Aligned_cols=76 Identities=18% Similarity=0.032 Sum_probs=48.3
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccc--hhh--ccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKT--EHL--RELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
||.|+||+|.+|+.++..|..++. ++..++........ ..+ ..............+|. + .+.++|+|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDiV 74 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDVV 74 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSEE
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCEE
Confidence 799999999999999999999884 78877753322111 111 11011123334444432 2 25789999
Q ss_pred EecCCCCCC
Q 025065 84 FHTASPVIF 92 (258)
Q Consensus 84 ih~a~~~~~ 92 (258)
+-+||....
T Consensus 75 vitaG~~~~ 83 (142)
T d1o6za1 75 VITAGIPRQ 83 (142)
T ss_dssp EECCCCCCC
T ss_pred EEecccccc
Confidence 999997543
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.52 E-value=4.6e-05 Score=46.75 Aligned_cols=38 Identities=39% Similarity=0.448 Sum_probs=34.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
++.+|||+||+|-+|...++.+...|.+|+++.+++++
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k 68 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST 68 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 46789999999999999999988999999999987644
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=97.52 E-value=0.0001 Score=53.51 Aligned_cols=34 Identities=35% Similarity=0.609 Sum_probs=28.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRG-YTVKATV 39 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~ 39 (258)
+++.||.|.||||+.|++|++.|.+.. .++..+.
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~ 37 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT 37 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence 356789999999999999999999876 4776664
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.51 E-value=3.4e-05 Score=55.98 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=27.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATV 39 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~ 39 (258)
|+||.|.|||||+|++|++.|.+.. +++..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence 5789999999999999999999875 5776553
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.51 E-value=0.00074 Score=46.61 Aligned_cols=76 Identities=17% Similarity=0.026 Sum_probs=49.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhc--ccc-CcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLR--ELD-GATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|||.|+|+ |.+|+.++..|...+ .++..+++++......... ... ......+.... .+. +.+.++|+|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence 58999997 999999999999987 5899998876543321111 110 00122333221 122 346889999
Q ss_pred EecCCCCC
Q 025065 84 FHTASPVI 91 (258)
Q Consensus 84 ih~a~~~~ 91 (258)
+-+||...
T Consensus 74 vitag~~~ 81 (142)
T d1guza1 74 IITAGLPR 81 (142)
T ss_dssp EECCSCCC
T ss_pred EEEEecCC
Confidence 99999854
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.51 E-value=6.7e-05 Score=54.01 Aligned_cols=75 Identities=21% Similarity=0.156 Sum_probs=50.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH---hC--CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA---VD--GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~---~~--~~d 81 (258)
++.+|||+||+|-+|...++.+...|.+|+++++++++. +...++ +.+. ..|.++.+..+++ .. ++|
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~--~~~~~~-----Ga~~-vi~~~~~~~~~~i~~~t~~~g~d 99 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ--KIVLQN-----GAHE-VFNHREVNYIDKIKKYVGEKGID 99 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH--HHHHHT-----TCSE-EEETTSTTHHHHHHHHHCTTCEE
T ss_pred CCCEEEEEeccccccccccccccccCccccccccccccc--cccccc-----Cccc-ccccccccHHHHhhhhhccCCce
Confidence 467999999999999999999999999999999764322 222222 2222 2366665443333 22 489
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+|+++++.
T Consensus 100 ~v~d~~g~ 107 (174)
T d1yb5a2 100 IIIEMLAN 107 (174)
T ss_dssp EEEESCHH
T ss_pred EEeecccH
Confidence 99987653
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.49 E-value=0.00038 Score=48.31 Aligned_cols=75 Identities=13% Similarity=0.182 Sum_probs=48.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhh--cc-ccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHL--RE-LDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|||.|+|+ |.+|+.++..|+.+| .++..++++......+.+ .. .............| . +.++++|+|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~----~~l~~adiV 73 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADVV 73 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSEE
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---H----HHhccccEE
Confidence 68999996 999999999999887 588888876543222111 11 11112223333333 2 236789999
Q ss_pred EecCCCCC
Q 025065 84 FHTASPVI 91 (258)
Q Consensus 84 ih~a~~~~ 91 (258)
|-+||...
T Consensus 74 VitaG~~~ 81 (146)
T d1hyha1 74 ISTLGNIK 81 (146)
T ss_dssp EECCSCGG
T ss_pred EEeccccc
Confidence 99999754
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.48 E-value=0.0015 Score=46.63 Aligned_cols=82 Identities=15% Similarity=0.041 Sum_probs=47.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-----C--EEEEEEcCCCCccchhh-ccccC-cCCcEEEEEccCCCcccHHHHhC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-----Y--TVKATVRDPNSPKTEHL-RELDG-ATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
..||.||||+|.||++++..|.+.. . +++.++..........+ .++.. ..+....+. -.....+.++
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~----~~~~~~~~~~ 99 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS----IGIDPYEVFE 99 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE----EESCHHHHTT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcc----ccccchhhcc
Confidence 4589999999999999999998742 2 34444443322211100 01110 011222211 1234667889
Q ss_pred CCcEEEecCCCCCCC
Q 025065 79 GCDGVFHTASPVIFL 93 (258)
Q Consensus 79 ~~d~Vih~a~~~~~~ 93 (258)
++|+||-++|.....
T Consensus 100 ~aDvVvi~ag~~rkp 114 (175)
T d7mdha1 100 DVDWALLIGAKPRGP 114 (175)
T ss_dssp TCSEEEECCCCCCCT
T ss_pred CCceEEEeeccCCCC
Confidence 999999999986543
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.46 E-value=0.00068 Score=46.69 Aligned_cols=76 Identities=20% Similarity=0.180 Sum_probs=48.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhhc--cccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHLR--ELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
|||.|+|+ |.+|+.++..|..++ .++..+++++.....+.+. .............+| . +.++++|+|+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence 58999997 999999999998877 5888888765433222111 110111223333332 2 2368899999
Q ss_pred ecCCCCCC
Q 025065 85 HTASPVIF 92 (258)
Q Consensus 85 h~a~~~~~ 92 (258)
-+|+....
T Consensus 73 itag~~~~ 80 (140)
T d1a5za1 73 VAAGVPQK 80 (140)
T ss_dssp ECCCCCCC
T ss_pred EecccccC
Confidence 99998544
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.45 E-value=0.00013 Score=51.30 Aligned_cols=82 Identities=21% Similarity=0.009 Sum_probs=47.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-----C--EEEEEEcCCCCccchhhc--cccCcCCcEEEEEccCCCcccHHHHh
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-----Y--TVKATVRDPNSPKTEHLR--ELDGATERLHLFKANLLEEGSFDSAV 77 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (258)
+.+||.|+||+|.+|++++..|.+.+ . +++.++.+......+.+. ...........+.+ .....+.+
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~ 77 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEEIAF 77 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHT
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----Cccccccc
Confidence 36799999999999999999998653 1 234444332222111110 00000112222111 13355778
Q ss_pred CCCcEEEecCCCCCC
Q 025065 78 DGCDGVFHTASPVIF 92 (258)
Q Consensus 78 ~~~d~Vih~a~~~~~ 92 (258)
+++|+||-++|....
T Consensus 78 ~~~dvVVitag~~~~ 92 (154)
T d5mdha1 78 KDLDVAILVGSMPRR 92 (154)
T ss_dssp TTCSEEEECCSCCCC
T ss_pred CCceEEEEecccCCC
Confidence 899999999998644
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.45 E-value=0.0018 Score=45.43 Aligned_cols=79 Identities=14% Similarity=-0.005 Sum_probs=50.2
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchhh--cccc-CcCCcEEEEEccCCCcccHHHHhCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEHL--RELD-GATERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~--~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
.+.+||.|+|+ |.+|+.++..|..+|. ++..++++++....+.+ .... ..+.......+|. +.++++
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~~~a 89 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVTANS 89 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGGTTC
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch-------hhcccc
Confidence 34579999996 9999999999999984 78888876543322211 1111 0111222222222 237789
Q ss_pred cEEEecCCCCCC
Q 025065 81 DGVFHTASPVIF 92 (258)
Q Consensus 81 d~Vih~a~~~~~ 92 (258)
|+|+.+||....
T Consensus 90 diVVitAg~~~~ 101 (160)
T d1i0za1 90 KIVVVTAGVRQQ 101 (160)
T ss_dssp SEEEECCSCCCC
T ss_pred cEEEEecCCccc
Confidence 999999998643
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.43 E-value=8.6e-05 Score=53.78 Aligned_cols=75 Identities=19% Similarity=0.139 Sum_probs=51.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-----CCCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DGCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~d 81 (258)
++.+|||+||+|.+|...++.+...|.+|+++++++++. +.+.+. +.+. ..|..+++..+++. +++|
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~--~~l~~~-----Ga~~-vi~~~~~~~~~~v~~~t~~~g~d 96 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR--EMLSRL-----GVEY-VGDSRSVDFADEILELTDGYGVD 96 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH--HHHHTT-----CCSE-EEETTCSTHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeecccccc--cccccc-----cccc-cccCCccCHHHHHHHHhCCCCEE
Confidence 467999999999999999999988999999998765332 222221 2222 23555554333332 3599
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+|+++.+.
T Consensus 97 ~v~d~~g~ 104 (183)
T d1pqwa_ 97 VVLNSLAG 104 (183)
T ss_dssp EEEECCCT
T ss_pred EEEecccc
Confidence 99998874
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.39 E-value=0.00016 Score=51.64 Aligned_cols=75 Identities=17% Similarity=0.100 Sum_probs=50.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCC-CcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~Vih 85 (258)
.+.+|+|+|+ |.+|...++.+...|.+|+++++++.+... ..++ +.+.+. |.. +.+..+...+++|+|+.
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~--a~~l-----Ga~~~i-~~~~~~~~~~~~~~~~d~vi~ 97 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRED--AMKM-----GADHYI-ATLEEGDWGEKYFDTFDLIVV 97 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH--HHHH-----TCSEEE-EGGGTSCHHHHSCSCEEEEEE
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHH--hhcc-----CCcEEe-eccchHHHHHhhhcccceEEE
Confidence 4679999997 999999999888889999999987654322 2222 122222 333 33444455567999999
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+.+..
T Consensus 98 ~~~~~ 102 (168)
T d1piwa2 98 CASSL 102 (168)
T ss_dssp CCSCS
T ss_pred EecCC
Confidence 87763
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=97.39 E-value=0.00061 Score=49.11 Aligned_cols=63 Identities=19% Similarity=0.204 Sum_probs=49.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+++|.|.|. |-||+.+++.|..-|.+|++.+|.+.+.. ..-.+++++++..+|+|+.
T Consensus 40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~--------------------~~~~~~l~ell~~sDiv~~ 98 (181)
T d1qp8a1 40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGP--------------------WRFTNSLEEALREARAAVC 98 (181)
T ss_dssp CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSS--------------------SCCBSCSHHHHTTCSEEEE
T ss_pred ccCceEEEecc-ccccccceeeeeccccccccccccccccc--------------------eeeeechhhhhhccchhhc
Confidence 46889999997 99999999999999999999988754321 1112457889999999887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 99 ~~pl 102 (181)
T d1qp8a1 99 ALPL 102 (181)
T ss_dssp CCCC
T ss_pred cccc
Confidence 6554
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.37 E-value=0.0001 Score=52.41 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=31.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
|+||.+.|- |.+|+.+++.|+++||+|++.+|++..
T Consensus 1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~ 36 (162)
T d3cuma2 1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSA 36 (162)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhh
Confidence 468999985 999999999999999999999987544
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=97.37 E-value=0.00015 Score=55.03 Aligned_cols=38 Identities=34% Similarity=0.531 Sum_probs=34.0
Q ss_pred CCCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 1 MMSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
||++ .+||+|+|| |..|-..+.+|.++|++|+++.|..
T Consensus 2 ~~~~---~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 2 MMHS---QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CCCC---SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCC---CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5555 678999998 9999999999999999999999864
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.34 E-value=8.2e-05 Score=53.89 Aligned_cols=79 Identities=15% Similarity=0.175 Sum_probs=50.2
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC-cCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG-ATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
|||.|.|+ |-.|..|+..|.++|++|+...|..++.....+..... ..-.......++.-.+++.++++++|+|+.+.
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av 79 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence 58999998 99999999999999999999987543311111111000 00011111122334567888999999998755
Q ss_pred C
Q 025065 88 S 88 (258)
Q Consensus 88 ~ 88 (258)
-
T Consensus 80 p 80 (180)
T d1txga2 80 S 80 (180)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.34 E-value=6e-05 Score=53.91 Aligned_cols=38 Identities=37% Similarity=0.494 Sum_probs=33.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
+..|||+||+|-+|...++-....|.+|+++++++++.
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~ 61 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 61 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHH
Confidence 45799999999999999998888999999999877654
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.29 E-value=9.6e-05 Score=52.91 Aligned_cols=35 Identities=23% Similarity=0.429 Sum_probs=29.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~ 43 (258)
||+|+|+|. |.+|..+++.|.+.|+ +|++++++++
T Consensus 1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~ 37 (171)
T d2g5ca2 1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPE 37 (171)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChH
Confidence 468999986 9999999999999986 6788877653
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.29 E-value=0.00093 Score=46.95 Aligned_cols=79 Identities=16% Similarity=0.112 Sum_probs=49.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCCCCccchh--hcccc-CcCCcEEEEEccCCCcccHHHHhCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDPNSPKTEH--LRELD-GATERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
++..||.|+|+ |.+|+.++..|..+|. ++..++++........ +.... ..+........|. +.+.++
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~a 88 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANS 88 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTE
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccc
Confidence 45568999996 9999999999999874 7888887654322111 11111 1111222222232 245789
Q ss_pred cEEEecCCCCCC
Q 025065 81 DGVFHTASPVIF 92 (258)
Q Consensus 81 d~Vih~a~~~~~ 92 (258)
|+||-+||....
T Consensus 89 divvitag~~~~ 100 (159)
T d2ldxa1 89 KLVIITAGARMV 100 (159)
T ss_dssp EEEEECCSCCCC
T ss_pred cEEEEecccccC
Confidence 999999998543
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.26 E-value=0.00014 Score=52.40 Aligned_cols=74 Identities=26% Similarity=0.266 Sum_probs=47.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCc-ccHHHHh--CCCcEEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEE-GSFDSAV--DGCDGVF 84 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~--~~~d~Vi 84 (258)
+.+|||+||+|.+|...++-+...|.+|+++++++++... ..++ ..... + |..+. ++..... +++|+|+
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~--~~~l---Ga~~v-i--~~~~~~~~~~~~~~~~gvD~vi 103 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY--LRVL---GAKEV-L--AREDVMAERIRPLDKQRWAAAV 103 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH--HHHT---TCSEE-E--ECC---------CCSCCEEEEE
T ss_pred CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHH--HHhc---cccee-e--ecchhHHHHHHHhhccCcCEEE
Confidence 5689999999999999999999999999999987765422 2222 11211 1 22221 1111222 2589999
Q ss_pred ecCCC
Q 025065 85 HTASP 89 (258)
Q Consensus 85 h~a~~ 89 (258)
++.+-
T Consensus 104 d~vgg 108 (176)
T d1xa0a2 104 DPVGG 108 (176)
T ss_dssp ECSTT
T ss_pred EcCCc
Confidence 99875
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.25 E-value=0.0028 Score=43.55 Aligned_cols=77 Identities=21% Similarity=0.125 Sum_probs=48.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchh--hccccCcCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEH--LRELDGATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
.||.|+|+ |.+|++++..|..+| .++..+++++...+.+. ++.............. ++++ .++++|+||
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~-----~~~~-~~~daDvVV 74 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS-----DDPE-ICRDADMVV 74 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE-----SCGG-GGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC-----CCHH-HhhCCcEEE
Confidence 58999997 999999999999988 48888887654332111 1211111122222222 1222 467899999
Q ss_pred ecCCCCCC
Q 025065 85 HTASPVIF 92 (258)
Q Consensus 85 h~a~~~~~ 92 (258)
-+||....
T Consensus 75 itaG~~~~ 82 (143)
T d1llda1 75 ITAGPRQK 82 (143)
T ss_dssp ECCCCCCC
T ss_pred EecccccC
Confidence 99998543
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.23 E-value=0.00015 Score=52.31 Aligned_cols=75 Identities=13% Similarity=0.057 Sum_probs=53.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh---C--CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV---D--GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~--~~d 81 (258)
.+.+|||+||+|.+|..+++.+...|.+|+++++++.+.. ...++ +.+ +..|..+++..+++. . ++|
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~--~~~~l-----Ga~-~vi~~~~~d~~~~v~~~t~g~g~d 99 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ--SALKA-----GAW-QVINYREEDLVERLKEITGGKKVR 99 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH--HHHHH-----TCS-EEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHH--HHHhc-----CCe-EEEECCCCCHHHHHHHHhCCCCeE
Confidence 3679999999999999999999999999999998865432 22222 222 224666655444332 2 489
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+|+++++.
T Consensus 100 ~v~d~~g~ 107 (179)
T d1qora2 100 VVYDSVGR 107 (179)
T ss_dssp EEEECSCG
T ss_pred EEEeCccH
Confidence 99998875
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.23 E-value=8.5e-05 Score=52.35 Aligned_cols=25 Identities=32% Similarity=0.478 Sum_probs=22.2
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY 33 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~ 33 (258)
=||.|.||||++|++|++.|.+..+
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCC
Confidence 3799999999999999999988754
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=97.18 E-value=0.00037 Score=46.79 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=32.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.++++|.|| |++|-+++..|.++|.+|+.+.+.+..
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL 65 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence 579999998 999999999999999999999987643
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.15 E-value=0.00039 Score=46.30 Aligned_cols=37 Identities=19% Similarity=0.156 Sum_probs=33.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
..++++|.|| |++|-+++..|.+.|.+|+++.|.+.-
T Consensus 21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI 57 (117)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred cCCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence 3579999998 999999999999999999999987643
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=0.00019 Score=51.41 Aligned_cols=73 Identities=15% Similarity=0.092 Sum_probs=48.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
.++|+|||.|+ |..+++++.+|.+.|.+|+++.|+.++... ..+... ..+.. .+..+. ....+|+|
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~----~~~~~--~~~~~~-----~~~~~dli 83 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT----GSIQA--LSMDEL-----EGHEFDLI 83 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG----SSEEE--CCSGGG-----TTCCCSEE
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc----ccccc--cccccc-----ccccccee
Confidence 36789999998 888999999999999999999987654322 111111 12222 222221 12468999
Q ss_pred EecCCCC
Q 025065 84 FHTASPV 90 (258)
Q Consensus 84 ih~a~~~ 90 (258)
||+....
T Consensus 84 IN~Tp~G 90 (170)
T d1nyta1 84 INATSSG 90 (170)
T ss_dssp EECCSCG
T ss_pred ecccccC
Confidence 9997663
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.14 E-value=0.00016 Score=52.10 Aligned_cols=73 Identities=29% Similarity=0.211 Sum_probs=48.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-CCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-GCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~Vih~a 87 (258)
..|||+||+|.+|+..++-....|.+|+++++++++. +.+..+ +.+.+ .|..+.+..+.+-+ ..|.|+++.
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~--~~~~~l-----Gad~v-i~~~~~~~~~~l~~~~~~~vvD~V 104 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH--EYLKSL-----GASRV-LPRDEFAESRPLEKQVWAGAIDTV 104 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH--HHHHHH-----TEEEE-EEGGGSSSCCSSCCCCEEEEEESS
T ss_pred CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH--HHHHhh-----ccccc-cccccHHHHHHHHhhcCCeeEEEc
Confidence 4899999999999999999999999999999876553 222222 23332 23333322222222 368888877
Q ss_pred CC
Q 025065 88 SP 89 (258)
Q Consensus 88 ~~ 89 (258)
+-
T Consensus 105 gg 106 (177)
T d1o89a2 105 GD 106 (177)
T ss_dssp CH
T ss_pred ch
Confidence 64
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.14 E-value=0.00015 Score=51.40 Aligned_cols=35 Identities=29% Similarity=0.478 Sum_probs=31.4
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
|||-|.|- |.+|+.+++.|+++||+|++.+|++..
T Consensus 1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~ 35 (161)
T d1vpda2 1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEA 35 (161)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcch
Confidence 57999986 999999999999999999999987644
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.10 E-value=0.00049 Score=46.28 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=32.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
+.++|+|.|| |++|-+++..|.+.|.+|+++.+.+.
T Consensus 29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence 4679999998 99999999999999999999988754
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.06 E-value=0.0023 Score=44.02 Aligned_cols=77 Identities=16% Similarity=0.066 Sum_probs=47.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCCCccchhh--cc-ccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPNSPKTEHL--RE-LDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
|||.|+|+ |.+|+.++..|..+| .++..++++++......+ .. ............. .++ +.++++|+|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~-----~d~-~~~~~adiV 73 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-----ADY-SLLKGSEII 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-----SCG-GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC-----CCH-HHhccccEE
Confidence 58999997 999999999999877 478888876543221111 11 0001111222221 112 357889999
Q ss_pred EecCCCCCC
Q 025065 84 FHTASPVIF 92 (258)
Q Consensus 84 ih~a~~~~~ 92 (258)
+-+|+....
T Consensus 74 vitag~~~~ 82 (142)
T d1ojua1 74 VVTAGLARK 82 (142)
T ss_dssp EECCCCCCC
T ss_pred EEeccccCC
Confidence 999987543
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.06 E-value=0.00037 Score=48.76 Aligned_cols=65 Identities=23% Similarity=0.268 Sum_probs=45.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTAS 88 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a~ 88 (258)
|||.|+|. |.+|+.+++.|+++||+|++.++++++........ .. + .+...++++++|+||-+..
T Consensus 1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~-------~~-----~--~~~~~e~~~~~diIi~~v~ 65 (152)
T d1i36a2 1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERART-------VG-----V--TETSEEDVYSCPVVISAVT 65 (152)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHH-------HT-----C--EECCHHHHHTSSEEEECSC
T ss_pred CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhc-------cc-----c--cccHHHHHhhcCeEEEEec
Confidence 57999986 99999999999999999998887665432211111 11 1 1234567788999886654
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.05 E-value=0.0004 Score=50.13 Aligned_cols=74 Identities=23% Similarity=0.251 Sum_probs=47.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcc--c----HHHHh--
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG--S----FDSAV-- 77 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--~----~~~~~-- 77 (258)
.+.+|||+|+ |-+|...++.+...|. +|+++++++.+.. ...++ +.+. ..|..+.+ + +.+..
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~--~a~~l-----Ga~~-vi~~~~~~~~~~~~~i~~~~~~ 98 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLK--LAEEI-----GADL-TLNRRETSVEERRKAIMDITHG 98 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHH--HHHHT-----TCSE-EEETTTSCHHHHHHHHHHHTTT
T ss_pred CCCEEEEECC-Cccchhheeccccccccccccccccccccc--ccccc-----cceE-EEeccccchHHHHHHHHHhhCC
Confidence 4679999997 8999999999999996 7999988664431 12221 1111 12443332 1 22222
Q ss_pred CCCcEEEecCCC
Q 025065 78 DGCDGVFHTASP 89 (258)
Q Consensus 78 ~~~d~Vih~a~~ 89 (258)
.++|+||.++|.
T Consensus 99 ~g~Dvvid~vG~ 110 (182)
T d1vj0a2 99 RGADFILEATGD 110 (182)
T ss_dssp SCEEEEEECSSC
T ss_pred CCceEEeecCCc
Confidence 258999999886
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=97.03 E-value=0.00052 Score=45.61 Aligned_cols=36 Identities=19% Similarity=0.150 Sum_probs=32.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.++|+|.|| |++|-+++..|.+.|.+|+++.|.+..
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence 478999998 999999999999999999999987643
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.02 E-value=0.0003 Score=49.30 Aligned_cols=65 Identities=22% Similarity=0.121 Sum_probs=45.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
|||.+.|+ |-+|+++++.|.+.|++|++.+|+.++.. .+.+.. + +.-..+..++++++|+|+-+.
T Consensus 1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~--~l~~~~----g-------~~~~~~~~~~~~~~dvIilav 65 (152)
T d2ahra2 1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSK--EIAEQL----A-------LPYAMSHQDLIDQVDLVILGI 65 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHH--HHHHHH----T-------CCBCSSHHHHHHTCSEEEECS
T ss_pred CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHH--hhcccc----c-------eeeechhhhhhhccceeeeec
Confidence 57999986 99999999999999999999888754332 111100 1 111234677788899888554
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.01 E-value=0.00039 Score=50.70 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=33.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.-+||.|.|+ |.+|+.++..++..|++|+++++++..
T Consensus 3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (192)
T d1f0ya2 3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI 39 (192)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence 4579999998 999999999999999999999987643
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.00062 Score=48.39 Aligned_cols=74 Identities=20% Similarity=0.160 Sum_probs=52.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
.+.+|+|.|+ |-+|...++.+...|.+++++++++++. +...++ +.+. ..|..+.+......+++|+||.+
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~--~~a~~l-----Gad~-~i~~~~~~~~~~~~~~~D~vid~ 100 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR--EAAKAL-----GADE-VVNSRNADEMAAHLKSFDFILNT 100 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH--HHHHHH-----TCSE-EEETTCHHHHHTTTTCEEEEEEC
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH--HHHhcc-----CCcE-EEECchhhHHHHhcCCCceeeee
Confidence 4678999997 8899999999988999999888766543 222222 1221 24566665555556789999999
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
++.
T Consensus 101 ~g~ 103 (168)
T d1uufa2 101 VAA 103 (168)
T ss_dssp CSS
T ss_pred eec
Confidence 886
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=97.00 E-value=0.0005 Score=45.79 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=32.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
.++|+|.|| |++|-+++..|.+.|.+|+++.|.+.
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence 579999998 99999999999999999999998754
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.99 E-value=0.00059 Score=45.82 Aligned_cols=37 Identities=16% Similarity=0.209 Sum_probs=33.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
..++++|.|| |+||-+++..|.+.|.+|+++.+.+..
T Consensus 22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence 3579999998 999999999999999999999887643
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=96.91 E-value=0.001 Score=47.24 Aligned_cols=76 Identities=18% Similarity=0.121 Sum_probs=48.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC--cccHHHHh-----CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE--EGSFDSAV-----DG 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~-----~~ 79 (258)
.+.+|+|+| +|-+|...++.+...|.+|+++++++.+.. ...++ .....+ ..|-.+ ...+.+.+ .+
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~--~a~~~---ga~~~~-~~~~~~~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLE--VAKNC---GADVTL-VVDPAKEEESSIIERIRSAIGDL 98 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHT---TCSEEE-ECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHH--HHHHc---CCcEEE-eccccccccchhhhhhhcccccC
Confidence 357899998 589999999999999999999998764432 11111 122222 223222 22222222 35
Q ss_pred CcEEEecCCC
Q 025065 80 CDGVFHTASP 89 (258)
Q Consensus 80 ~d~Vih~a~~ 89 (258)
+|+||++++.
T Consensus 99 ~D~vid~~g~ 108 (170)
T d1e3ja2 99 PNVTIDCSGN 108 (170)
T ss_dssp CSEEEECSCC
T ss_pred CceeeecCCC
Confidence 8999999987
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.91 E-value=0.00089 Score=44.67 Aligned_cols=36 Identities=19% Similarity=0.109 Sum_probs=32.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
.+++++|.|| |+||-+++..|.+.|.+|+++.+...
T Consensus 21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence 3578999998 99999999999999999999998764
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.91 E-value=0.00069 Score=49.48 Aligned_cols=66 Identities=17% Similarity=0.110 Sum_probs=48.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|- |-||+.+++.|..-|.+|++.++...+... .+....+++.++++.+|+|+.
T Consensus 41 l~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~-----------------~~~~~~~~l~~~l~~sDii~~ 102 (197)
T d1j4aa1 41 VRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELE-----------------KKGYYVDSLDDLYKQADVISL 102 (197)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHH-----------------HTTCBCSCHHHHHHHCSEEEE
T ss_pred ccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccc-----------------cceeeeccccccccccccccc
Confidence 45789999996 999999999999999999998765432211 011223568888888998776
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 103 ~~pl 106 (197)
T d1j4aa1 103 HVPD 106 (197)
T ss_dssp CSCC
T ss_pred cCCc
Confidence 6554
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.90 E-value=0.00083 Score=47.91 Aligned_cols=73 Identities=18% Similarity=0.177 Sum_probs=49.4
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
.++++|+|.|+ |..++.++..|.+.+.+|+++.|+.++... +.+.. ...+....-|-. .+..+|+|
T Consensus 16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~----~~~~~~~~~~~~-------~~~~~dii 83 (171)
T d1p77a1 16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP----YGNIQAVSMDSI-------PLQTYDLV 83 (171)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GSCEEEEEGGGC-------CCSCCSEE
T ss_pred CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhh----ccccchhhhccc-------ccccccee
Confidence 36789999998 778999999999888899999998654322 11111 123344443322 14578999
Q ss_pred EecCCCC
Q 025065 84 FHTASPV 90 (258)
Q Consensus 84 ih~a~~~ 90 (258)
||+....
T Consensus 84 IN~tp~g 90 (171)
T d1p77a1 84 INATSAG 90 (171)
T ss_dssp EECCCC-
T ss_pred eeccccc
Confidence 9997763
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=96.89 E-value=0.00047 Score=46.76 Aligned_cols=69 Identities=19% Similarity=0.201 Sum_probs=51.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH-hCCCcEEEecC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA-VDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~a 87 (258)
|.|+|.|. |-+|+++++.| ++++|.+++.++.... .+. ..++.++.||.++++.|+++ +++++.|+-+.
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~--~~~-----~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~ 70 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRK--KVL-----RSGANFVHGDPTRVSDLEKANVRGARAVIVNL 70 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHH--HHH-----HTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHH--HHH-----hcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence 46899997 88999999999 4677888877654432 121 24789999999999888875 46788888544
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=96.88 E-value=0.0017 Score=45.58 Aligned_cols=59 Identities=24% Similarity=0.154 Sum_probs=47.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+|+|+|.|.+..+|+.|+..|.++|..|+...... ..+.+..+++|+||.
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t----------------------------~~l~~~~~~ADivI~ 86 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT----------------------------KNLRHHVENADLLIV 86 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC----------------------------SCHHHHHHHCSEEEE
T ss_pred cccceEEEEeccccccHHHHHHHHHhhcccccccccc----------------------------chhHHHHhhhhHhhh
Confidence 4689999999999999999999999999998765432 124555677899998
Q ss_pred cCCCCCC
Q 025065 86 TASPVIF 92 (258)
Q Consensus 86 ~a~~~~~ 92 (258)
++|..+.
T Consensus 87 a~G~p~~ 93 (166)
T d1b0aa1 87 AVGKPGF 93 (166)
T ss_dssp CSCCTTC
T ss_pred hccCccc
Confidence 8887543
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.86 E-value=0.00069 Score=45.44 Aligned_cols=35 Identities=29% Similarity=0.385 Sum_probs=31.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
.++++|.|| |++|-+++..|.+.|.+|+++.|.+.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 368999998 99999999999999999999988654
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.86 E-value=0.00091 Score=44.29 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=32.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
.+++++|.|| |++|-+++..|.+.|.+|+++.+.+.
T Consensus 20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 20 LPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence 3589999998 99999999999999999999988654
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.84 E-value=0.0009 Score=45.05 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=32.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
.++++|.|| |++|-+++..|.+.|.+|+++.|++.
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence 478999998 99999999999999999999998764
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=96.83 E-value=0.00096 Score=45.44 Aligned_cols=37 Identities=11% Similarity=0.199 Sum_probs=33.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
..++|+|.|| |++|-+++..|.+.|.+|+++.+.+..
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence 3689999998 999999999999999999999987653
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.80 E-value=0.002 Score=43.45 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=47.5
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEE-EcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----CCcE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKAT-VRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GCDG 82 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~ 82 (258)
|||.|.|++|-.|+.|++.+.++++++.+. +++... .+ .+.+ +..|.+.|+.+.+.++ ++-.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----~~-------~~~D-VvIDFS~p~~~~~~l~~~~~~~~p~ 68 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----EL-------DSPD-VVIDFSSPEALPKTVDLCKKYRAGL 68 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----EC-------SCCS-EEEECSCGGGHHHHHHHHHHHTCEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----Hh-------ccCC-EEEEecCHHHHHHHHHHHHhcCCCE
Confidence 579999999999999999999999988754 332211 11 1122 4568999888777654 4667
Q ss_pred EEecCCC
Q 025065 83 VFHTASP 89 (258)
Q Consensus 83 Vih~a~~ 89 (258)
|+=+.|.
T Consensus 69 ViGTTG~ 75 (128)
T d1vm6a3 69 VLGTTAL 75 (128)
T ss_dssp EECCCSC
T ss_pred EEEcCCC
Confidence 7744443
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.80 E-value=0.0011 Score=44.35 Aligned_cols=34 Identities=29% Similarity=0.262 Sum_probs=31.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
..++++|.|| |+||-+++..|.+.|.+|+++.|+
T Consensus 19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 3578999998 999999999999999999999875
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.77 E-value=0.00074 Score=49.57 Aligned_cols=80 Identities=18% Similarity=0.136 Sum_probs=49.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccC--cCCcE-E-----EEEccCCCcccHHHHhCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDG--ATERL-H-----LFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~-~-----~~~~Dl~~~~~~~~~~~~~ 80 (258)
|||.|.|. ||+|..++..|+++||+|++++.+..... .+..-.. ..+.. + .....+.-..++.+++..+
T Consensus 1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~--~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 77 (202)
T d1mv8a2 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKID--LINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDS 77 (202)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH--HHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHH--HhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhC
Confidence 57999975 99999999999999999999987542211 1100000 00000 0 0001112234567778889
Q ss_pred cEEEecCCCCC
Q 025065 81 DGVFHTASPVI 91 (258)
Q Consensus 81 d~Vih~a~~~~ 91 (258)
|+++-|.....
T Consensus 78 d~i~i~VpTP~ 88 (202)
T d1mv8a2 78 DVSFICVGTPS 88 (202)
T ss_dssp SEEEECCCCCB
T ss_pred CEEEEecCccc
Confidence 99999887743
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=96.75 E-value=0.0054 Score=38.95 Aligned_cols=71 Identities=15% Similarity=0.264 Sum_probs=49.1
Q ss_pred CCcEEEEECCcchHH-HHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTGASGFVA-SWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItGa~G~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.++|.+.|. |.+| +.||+.|.++|++|.+.|+...+.. ..+.+ .++.+..++-.+ .+.++|.||-
T Consensus 7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~-~~L~~-----~Gi~v~~g~~~~------~i~~~d~vV~ 73 (96)
T d1p3da1 7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT-QRLAQ-----AGAKIYIGHAEE------HIEGASVVVV 73 (96)
T ss_dssp TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH-HHHHH-----TTCEEEESCCGG------GGTTCSEEEE
T ss_pred hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh-hHHHH-----CCCeEEECCccc------cCCCCCEEEE
Confidence 4689999987 4455 8899999999999999998754432 22222 355655544322 2467899998
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
..|+.
T Consensus 74 S~AI~ 78 (96)
T d1p3da1 74 SSAIK 78 (96)
T ss_dssp CTTSC
T ss_pred CCCcC
Confidence 88874
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.0047 Score=43.58 Aligned_cols=37 Identities=24% Similarity=0.187 Sum_probs=33.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
..+|+|+|.|.+..+|+.|+..|+++|..|+......
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t 73 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT 73 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred cccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence 4689999999999999999999999999999876544
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.67 E-value=0.0016 Score=47.28 Aligned_cols=68 Identities=12% Similarity=-0.011 Sum_probs=49.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|. |-||+.+++.|..-|.+|.+.++......... ..+...+++.++++.+|+|+.
T Consensus 47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~---------------~~~~~~~~l~~ll~~sD~i~~ 110 (193)
T d1mx3a1 47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERA---------------LGLQRVSTLQDLLFHSDCVTL 110 (193)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH---------------HTCEECSSHHHHHHHCSEEEE
T ss_pred eeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhh---------------hccccccchhhccccCCEEEE
Confidence 46789999997 99999999999999999999987654431110 112223568888888998776
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 111 ~~pl 114 (193)
T d1mx3a1 111 HCGL 114 (193)
T ss_dssp CCCC
T ss_pred eecc
Confidence 5554
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.65 E-value=0.0053 Score=42.09 Aligned_cols=76 Identities=16% Similarity=0.171 Sum_probs=45.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccC---cCCcEEEEEccCCCcccHHHHhCCCcEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDG---ATERLHLFKANLLEEGSFDSAVDGCDGVF 84 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (258)
+||.|+|+ |.+|+.++..|..++ .++..++.++............. .......... .+++ .+.++|+||
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~-----~d~~-~~~~advvv 74 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-----NNYA-DTANSDVIV 74 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-----SCGG-GGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec-----CcHH-HhcCCCEEE
Confidence 68999997 999999999998877 48888887654332211111000 0111112111 1122 357899999
Q ss_pred ecCCCCC
Q 025065 85 HTASPVI 91 (258)
Q Consensus 85 h~a~~~~ 91 (258)
-+||...
T Consensus 75 itag~~~ 81 (142)
T d1uxja1 75 VTSGAPR 81 (142)
T ss_dssp ECCSCC-
T ss_pred EeeeccC
Confidence 9999854
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.55 E-value=0.0077 Score=40.49 Aligned_cols=42 Identities=21% Similarity=0.003 Sum_probs=34.4
Q ss_pred CCCCCCCCcEEEEECCc---chHHHHHHHHHHHCC-CEEEEEEcCC
Q 025065 1 MMSGEGEEKVVCVTGAS---GFVASWLVKLLLQRG-YTVKATVRDP 42 (258)
Q Consensus 1 mm~~~~~~~~ilItGa~---G~iG~~l~~~L~~~g-~~V~~~~r~~ 42 (258)
||..-++.++|.|.|+| +-.|..+.+.|.+.| ++|+.+..+.
T Consensus 1 ~L~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~ 46 (129)
T d2csua1 1 MLDYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE 46 (129)
T ss_dssp CCCTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC
T ss_pred ChhHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc
Confidence 56665678999999998 999999999998766 6898886543
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.55 E-value=0.0034 Score=45.75 Aligned_cols=65 Identities=18% Similarity=0.136 Sum_probs=48.1
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|. |-||+.+++.|..-|.+|++.++....... ..+ +..++.++++.+|+|+.
T Consensus 43 l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----------~~~--------~~~~l~~l~~~~D~v~~ 103 (199)
T d1dxya1 43 LGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDH----------PDF--------DYVSLEDLFKQSDVIDL 103 (199)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCC----------TTC--------EECCHHHHHHHCSEEEE
T ss_pred ccceeeeeeec-ccccccccccccccceeeeccCCccchhhh----------cch--------hHHHHHHHHHhccccee
Confidence 45789999996 999999999999999999999876544311 111 12357788888898776
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+.-.
T Consensus 104 ~~pl 107 (199)
T d1dxya1 104 HVPG 107 (199)
T ss_dssp CCCC
T ss_pred eecc
Confidence 5544
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.55 E-value=0.0014 Score=46.43 Aligned_cols=75 Identities=16% Similarity=0.165 Sum_probs=49.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-----CCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DGC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~ 80 (258)
.+.+|+|+|++|-+|...++.+...|. +|++.++++.+. +...++ +.+ +..|..+.+..++.. .++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~--~~~~~~-----Ga~-~~i~~~~~~~~~~~~~~~~~~~~ 98 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV--EAAKRA-----GAD-YVINASMQDPLAEIRRITESKGV 98 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH--HHHHHH-----TCS-EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhH--HHHHHc-----CCc-eeeccCCcCHHHHHHHHhhcccc
Confidence 356899999999999999999988884 888888765332 222221 121 123444444444433 248
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+|+.+++.
T Consensus 99 d~vid~~g~ 107 (170)
T d1jvba2 99 DAVIDLNNS 107 (170)
T ss_dssp EEEEESCCC
T ss_pred hhhhccccc
Confidence 999999886
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.54 E-value=0.0016 Score=39.64 Aligned_cols=36 Identities=28% Similarity=0.264 Sum_probs=31.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
+|+|.|.|+ |.+|+-++.+-.+-|++|++++-++..
T Consensus 1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 478999998 999999999999999999999865544
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.54 E-value=0.0052 Score=44.32 Aligned_cols=66 Identities=17% Similarity=0.078 Sum_probs=48.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..+++|.|.|. |.||+.+++.|..-|.+|++.++....... .....+++.++++.+|+|+-
T Consensus 42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~------------------~~~~~~~l~ell~~sDii~i 102 (188)
T d1sc6a1 42 ARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLG------------------NATQVQHLSDLLNMSDVVSL 102 (188)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCT------------------TCEECSCHHHHHHHCSEEEE
T ss_pred ccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhh------------------hhhhhhhHHHHHhhccceee
Confidence 45789999985 999999999999999999999875433211 01112468888888998876
Q ss_pred cCCCC
Q 025065 86 TASPV 90 (258)
Q Consensus 86 ~a~~~ 90 (258)
+....
T Consensus 103 ~~plt 107 (188)
T d1sc6a1 103 HVPEN 107 (188)
T ss_dssp CCCSS
T ss_pred cccCC
Confidence 66553
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=96.54 E-value=0.0012 Score=44.28 Aligned_cols=36 Identities=19% Similarity=0.198 Sum_probs=32.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
+++++|.|| |+||-+++..|.+.|.+|+++.|++..
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 578999998 999999999999999999999887654
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=96.54 E-value=0.0022 Score=43.07 Aligned_cols=37 Identities=8% Similarity=0.043 Sum_probs=32.9
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
..++++|.|| |+||-+++..|.+.|.+|+++.+.+.-
T Consensus 25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~i 61 (125)
T d1ojta2 25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGL 61 (125)
T ss_dssp CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence 3579999998 999999999999999999999887643
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.53 E-value=0.0014 Score=45.52 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=32.3
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
.+++|++||+|| |.+|.+-++.|++.|.+|++++-.
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999998 999999999999999999998643
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=96.52 E-value=0.0023 Score=42.51 Aligned_cols=36 Identities=19% Similarity=0.086 Sum_probs=32.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
.+++|+|.|| |++|-+++..|.+.|.+|+++.|.+.
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence 3689999998 99999999999999999999998754
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.47 E-value=0.0011 Score=47.41 Aligned_cols=74 Identities=16% Similarity=0.029 Sum_probs=47.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccH---HHHhC--CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSF---DSAVD--GC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~---~~~~~--~~ 80 (258)
.+.+|+|.|+ |.+|...++.+...|. +|+++++++.+.. ...++ +.+ +..|..+.+.. .+... ++
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~--~a~~l-----Ga~-~~i~~~~~~~~~~v~~~t~g~G~ 97 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVE--AAKFY-----GAT-DILNYKNGHIEDQVMKLTNGKGV 97 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHH--HHHHH-----TCS-EEECGGGSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHH--HHHhh-----Ccc-ccccccchhHHHHHHHHhhccCc
Confidence 4678999987 9999999999998896 7888887653321 12221 111 12344443333 33332 48
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+||.+++.
T Consensus 98 D~vid~~g~ 106 (174)
T d1jqba2 98 DRVIMAGGG 106 (174)
T ss_dssp EEEEECSSC
T ss_pred ceEEEccCC
Confidence 999999986
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.45 E-value=0.0014 Score=46.90 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=32.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
..+|-|+|- |.+|+.+++.|+++||+|++.+|++++.
T Consensus 2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~ 38 (176)
T d2pgda2 2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKV 38 (176)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHH
T ss_pred CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 357999996 9999999999999999999999987544
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.44 E-value=0.00085 Score=48.59 Aligned_cols=74 Identities=18% Similarity=0.139 Sum_probs=45.0
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEE-EEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHH---HHh-CCCcEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTV-KATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFD---SAV-DGCDGV 83 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~-~~~d~V 83 (258)
..|||+||+|-+|+..++-....|.++ ++++.+.++... ....+ +.+ +..|..+++..+ ++. +++|+|
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~-l~~~~-----gad-~vi~~~~~~~~~~~~~~~~~GvDvv 104 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLF-LTSEL-----GFD-AAVNYKTGNVAEQLREACPGGVDVY 104 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHH-HHHHS-----CCS-EEEETTSSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhh-hhhcc-----cce-EEeeccchhHHHHHHHHhccCceEE
Confidence 679999999999999999998899754 444544322211 11111 111 234555543322 222 259999
Q ss_pred EecCCC
Q 025065 84 FHTASP 89 (258)
Q Consensus 84 ih~a~~ 89 (258)
+++.|-
T Consensus 105 ~D~vGg 110 (187)
T d1vj1a2 105 FDNVGG 110 (187)
T ss_dssp EESSCH
T ss_pred EecCCc
Confidence 998874
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.42 E-value=0.0031 Score=44.38 Aligned_cols=37 Identities=22% Similarity=0.189 Sum_probs=31.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.+.+|+|.|+ |-+|...++.+...|.+|+++++++.+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~ 63 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAK 63 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhH
Confidence 4678999987 999999999888899999999887544
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.40 E-value=0.004 Score=44.07 Aligned_cols=76 Identities=13% Similarity=0.050 Sum_probs=48.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-----CCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DGC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~ 80 (258)
.+.+|+|.|+ |-+|...++.+...|. +|+++++++.+... ..++ +.. ..+..+-.+.....+.+ .++
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~--a~~~---Ga~-~~~~~~~~~~~~~~~~~~~~~g~g~ 98 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK--AKEI---GAD-LVLQISKESPQEIARKVEGQLGCKP 98 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH--HHHT---TCS-EEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHH--HHHh---CCc-ccccccccccccccccccccCCCCc
Confidence 3568999987 9999999999999997 79998877544321 1111 111 22222223333333333 258
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+||.+++.
T Consensus 99 Dvvid~~G~ 107 (171)
T d1pl8a2 99 EVTIECTGA 107 (171)
T ss_dssp SEEEECSCC
T ss_pred eEEEeccCC
Confidence 999999987
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.39 E-value=0.00099 Score=46.90 Aligned_cols=77 Identities=18% Similarity=0.137 Sum_probs=56.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
..-+|+|.|+ |-.|..-++.....|.+|++++.+.+... .++..- ...++. -..+.+.+.+.++++|+||.+
T Consensus 31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~--~l~~~~--~~~~~~---~~~~~~~l~~~~~~aDivI~a 102 (168)
T d1pjca1 31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLS--YLETLF--GSRVEL---LYSNSAEIETAVAEADLLIGA 102 (168)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH--HHHHHH--GGGSEE---EECCHHHHHHHHHTCSEEEEC
T ss_pred CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHH--HHHHhh--ccccee---ehhhhhhHHHhhccCcEEEEe
Confidence 3569999998 99999999999999999999998764432 121111 122333 345567788899999999988
Q ss_pred CCCCC
Q 025065 87 ASPVI 91 (258)
Q Consensus 87 a~~~~ 91 (258)
+-...
T Consensus 103 alipG 107 (168)
T d1pjca1 103 VLVPG 107 (168)
T ss_dssp CCCTT
T ss_pred eecCC
Confidence 88754
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.36 E-value=0.032 Score=38.33 Aligned_cols=77 Identities=19% Similarity=0.209 Sum_probs=46.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhh--ccccC-cCCcEEEEEccCCCcccHHHHhCCCcEE
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHL--RELDG-ATERLHLFKANLLEEGSFDSAVDGCDGV 83 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~--~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (258)
.+||.|+|+ |.+|+.++..|..++ .++..+++++.......+ ..... ..........+ + .+.++++|+|
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~advv 75 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGADVV 75 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCcEE
Confidence 468999996 999999998887777 488888876644322111 11100 01112222211 1 2346789999
Q ss_pred EecCCCCC
Q 025065 84 FHTASPVI 91 (258)
Q Consensus 84 ih~a~~~~ 91 (258)
+-+++...
T Consensus 76 vitag~~~ 83 (150)
T d1t2da1 76 IVTAGFTK 83 (150)
T ss_dssp EECCSCSS
T ss_pred EEeccccc
Confidence 99999753
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.32 E-value=0.0024 Score=50.08 Aligned_cols=36 Identities=22% Similarity=0.388 Sum_probs=32.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
++|||+|+|| |+-|...|..|.++|++|+++.++..
T Consensus 1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 3689999998 99999999999999999999987654
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=96.29 E-value=0.011 Score=36.86 Aligned_cols=70 Identities=16% Similarity=0.093 Sum_probs=47.7
Q ss_pred cEEEEECCcchHH-HHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEecC
Q 025065 9 KVVCVTGASGFVA-SWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHTA 87 (258)
Q Consensus 9 ~~ilItGa~G~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~a 87 (258)
|||-++|- |.+| +.||+.|.++|++|.+.|+..++.. ..++. .++.+..+.- ++. ++++|.||...
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t-~~L~~-----~Gi~i~~gh~--~~~----i~~~d~vV~Ss 68 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERT-AYLRK-----LGIPIFVPHS--ADN----WYDPDLVIKTP 68 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HHHHH-----TTCCEESSCC--TTS----CCCCSEEEECT
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhH-HHHHH-----CCCeEEeeec--ccc----cCCCCEEEEec
Confidence 67889987 4455 6899999999999999998754332 33443 3555554421 221 35789999888
Q ss_pred CCCC
Q 025065 88 SPVI 91 (258)
Q Consensus 88 ~~~~ 91 (258)
++..
T Consensus 69 AI~~ 72 (89)
T d1j6ua1 69 AVRD 72 (89)
T ss_dssp TCCT
T ss_pred CcCC
Confidence 8843
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=96.27 E-value=0.0026 Score=45.15 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=27.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRDP 42 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~ 42 (258)
|++.||.|.|. |++|+..++.|.+. +.+++++....
T Consensus 1 M~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~ 37 (170)
T d1f06a1 1 MTNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRR 37 (170)
T ss_dssp CCCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESS
T ss_pred CCcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecc
Confidence 34578999995 99999999999875 57877665433
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=96.27 E-value=0.0025 Score=44.87 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=28.2
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHC-CCEEEEE-EcC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQR-GYTVKAT-VRD 41 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~-~r~ 41 (258)
+.+||.|.|++|-+|+.+++.+.+. +.++.+. +|.
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~ 39 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE 39 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecc
Confidence 4579999999999999999999875 5777654 443
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.26 E-value=0.002 Score=46.49 Aligned_cols=36 Identities=17% Similarity=0.205 Sum_probs=32.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
+-+||.|.|+ |.+|+.++..++..|++|++++++++
T Consensus 3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~ 38 (186)
T d1wdka3 3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH 38 (186)
T ss_dssp CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3578999998 99999999999999999999998764
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=96.25 E-value=0.0035 Score=44.85 Aligned_cols=37 Identities=22% Similarity=0.149 Sum_probs=33.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
++|+|+|.|| |..|-+.+..|.++||+|+++.+.+..
T Consensus 42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~ 78 (179)
T d1ps9a3 42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI 78 (179)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence 5789999998 999999999999999999999987543
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=96.24 E-value=0.0073 Score=42.94 Aligned_cols=77 Identities=16% Similarity=0.015 Sum_probs=52.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccC--------------------
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL-------------------- 67 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------------------- 67 (258)
.-+|+|.|| |-.|.+-++-....|.+|++++.+...... ++++- -.++..+.
T Consensus 29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~--l~~l~-----~~~i~~~~~~~~~~~~~~gyA~~~s~~~ 100 (183)
T d1l7da1 29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQ--VESLG-----GKFITVDDEAMKTAETAGGYAKEMGEEF 100 (183)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHH--HHHTT-----CEECCC----------------------
T ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHH--HHHhh-----cceEEEeccccccccccccchhhcCHHH
Confidence 458999998 999999999999999999999988765432 22221 12221111
Q ss_pred --CCcccHHHHhCCCcEEEecCCCCCC
Q 025065 68 --LEEGSFDSAVDGCDGVFHTASPVIF 92 (258)
Q Consensus 68 --~~~~~~~~~~~~~d~Vih~a~~~~~ 92 (258)
.+.+.+.+.+.++|+||-++-..+.
T Consensus 101 ~~~~~~~l~~~l~~aDlVI~talipG~ 127 (183)
T d1l7da1 101 RKKQAEAVLKELVKTDIAITTALIPGK 127 (183)
T ss_dssp -CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred HHHHHHHHHHHHHhhhhheeeeecCCc
Confidence 1224456667889999987777543
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.22 E-value=0.0025 Score=45.87 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=32.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~ 44 (258)
++||+|.|| |..|-..+.+|.++|+ +|+++.|++..
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~ 40 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV 40 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence 689999998 9999999999999998 59999887643
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.15 E-value=0.0075 Score=42.77 Aligned_cols=75 Identities=12% Similarity=0.039 Sum_probs=46.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHh-----CCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAV-----DGC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~ 80 (258)
.+.+|+|.|+ |.+|...+..+...| ..|+++++++.+... ..+. +.....-+-...+.+.+.. .++
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~--a~~~-----Ga~~~i~~~~~~~~~~~~~~~~~~~G~ 99 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAK--AKEV-----GATECVNPQDYKKPIQEVLTEMSNGGV 99 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH--HHHT-----TCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHH--HHHh-----CCeeEEecCCchhHHHHHHHHHhcCCC
Confidence 4578999999 558999999999888 588888877654322 1111 1222211112223333322 369
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+||.+.+.
T Consensus 100 D~vid~~G~ 108 (176)
T d2jhfa2 100 DFSFEVIGR 108 (176)
T ss_dssp SEEEECSCC
T ss_pred CEEEecCCc
Confidence 999999887
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=96.15 E-value=0.0032 Score=44.54 Aligned_cols=34 Identities=18% Similarity=0.120 Sum_probs=29.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~ 42 (258)
+|||+|.|| |++|-+++.+|.+.++ +|+++.+.+
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 689999998 9999999999999874 788887665
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.14 E-value=0.0044 Score=44.52 Aligned_cols=67 Identities=18% Similarity=0.068 Sum_probs=47.8
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..++++.|.|. |.||+.+++.|..-|.+|.+.++...+..... ..+ ...++.++++.+|+|+-
T Consensus 42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~--------~~~--------~~~~l~ell~~sDiv~~ 104 (184)
T d1ygya1 42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ--------LGI--------ELLSLDDLLARADFISV 104 (184)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH--------HTC--------EECCHHHHHHHCSEEEE
T ss_pred ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhh--------cCc--------eeccHHHHHhhCCEEEE
Confidence 45788999996 99999999999988999999887654322100 011 12457788888998876
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 105 ~~Pl 108 (184)
T d1ygya1 105 HLPK 108 (184)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 5554
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.13 E-value=0.0026 Score=45.43 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=31.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
|||-|+|- |.+|+.+++.|+++||+|++.+|++++.
T Consensus 2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~ 37 (178)
T d1pgja2 2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKS 37 (178)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 57999985 9999999999999999999999876543
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=96.12 E-value=0.0081 Score=43.34 Aligned_cols=69 Identities=16% Similarity=0.026 Sum_probs=48.9
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..++++.|.|. |-||+.+++.|..-|.+|.+.++.......... ......+++.++++.+|+|+-
T Consensus 45 l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------------~~~~~~~~l~~ll~~sD~v~l 109 (191)
T d1gdha1 45 LDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS--------------YQATFHDSLDSLLSVSQFFSL 109 (191)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH--------------HTCEECSSHHHHHHHCSEEEE
T ss_pred ecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhc--------------ccccccCCHHHHHhhCCeEEe
Confidence 35789999997 999999999999999999998875543321110 011223568888888998875
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 110 ~~pl 113 (191)
T d1gdha1 110 NAPS 113 (191)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 5544
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.11 E-value=0.0067 Score=42.37 Aligned_cols=70 Identities=24% Similarity=0.139 Sum_probs=50.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+|+++|.| .|.+|+.+++.|...|-+|++...+|... ++.. .|--....+++++...|+|+-
T Consensus 22 l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~a----l~A~-----------~dG~~v~~~~~a~~~adivvt 85 (163)
T d1li4a1 22 IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINA----LQAA-----------MEGYEVTTMDEACQEGNIFVT 85 (163)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH----HHHH-----------HTTCEECCHHHHTTTCSEEEE
T ss_pred ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchh----HHhh-----------cCceEeeehhhhhhhccEEEe
Confidence 4689999999 59999999999999999999998765332 1111 122222346777888898887
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
+.+..+
T Consensus 86 aTGn~~ 91 (163)
T d1li4a1 86 TTGCID 91 (163)
T ss_dssp CSSCSC
T ss_pred cCCCcc
Confidence 777643
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=96.08 E-value=0.0098 Score=42.79 Aligned_cols=69 Identities=20% Similarity=0.105 Sum_probs=49.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
..++++.|.|. |-||+.+++.|..-|.+|.+.++...+..... . ..+....++.++++.+|+|+-
T Consensus 42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--~------------~~~~~~~~l~~~l~~sD~v~~ 106 (188)
T d2naca1 42 LEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK--E------------LNLTWHATREDMYPVCDVVTL 106 (188)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH--H------------HTCEECSSHHHHGGGCSEEEE
T ss_pred ccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccc--c------------ccccccCCHHHHHHhccchhh
Confidence 45789999996 99999999999988999999988654432211 0 112234567788888998865
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
+...
T Consensus 107 ~~pl 110 (188)
T d2naca1 107 NCPL 110 (188)
T ss_dssp CSCC
T ss_pred cccc
Confidence 5544
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=96.07 E-value=0.0036 Score=45.18 Aligned_cols=38 Identities=13% Similarity=0.174 Sum_probs=31.6
Q ss_pred CcEEEE-ECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 8 EKVVCV-TGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 8 ~~~ilI-tGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
+.+++| +||+|.+|...++-....|.+|++++|+.+..
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~ 67 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL 67 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc
Confidence 456666 69999999999998888899999999876553
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=96.03 E-value=0.0048 Score=46.50 Aligned_cols=35 Identities=20% Similarity=0.275 Sum_probs=32.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
.+||+|+|| |..|..++..|.++|++|+++.|++.
T Consensus 4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 579999998 99999999999999999999998654
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.98 E-value=0.011 Score=41.98 Aligned_cols=74 Identities=16% Similarity=0.078 Sum_probs=46.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCC-cccHHHHh-----CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLE-EGSFDSAV-----DG 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~-----~~ 79 (258)
.+.+|+|+|+ |.||...++.+...|. .|++.++++.+.. ..+++ +.+.+ .|..+ .+...... .+
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~--~a~~~-----Ga~~~-i~~~~~~~~~~~~~~~~~~~G 98 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP--KAKAL-----GATDC-LNPRELDKPVQDVITELTAGG 98 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH--HHHHT-----TCSEE-ECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH--HHHHh-----CCCcc-cCCccchhhhhhhHhhhhcCC
Confidence 4678999986 9999999999999997 6777776654432 11211 12221 22222 22233222 36
Q ss_pred CcEEEecCCC
Q 025065 80 CDGVFHTASP 89 (258)
Q Consensus 80 ~d~Vih~a~~ 89 (258)
+|+||.++|.
T Consensus 99 ~d~vie~~G~ 108 (174)
T d1e3ia2 99 VDYSLDCAGT 108 (174)
T ss_dssp BSEEEESSCC
T ss_pred CcEEEEeccc
Confidence 9999999987
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.96 E-value=0.0038 Score=43.33 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=30.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNS 44 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~ 44 (258)
|||.+.|+ |-+|+++++.|++.| ++|++.+|+++.
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~ 36 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEK 36 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence 57999987 999999999999887 899999887644
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=95.84 E-value=0.023 Score=37.70 Aligned_cols=77 Identities=18% Similarity=0.203 Sum_probs=52.3
Q ss_pred CCCCCCCcEEEEECCc----------chHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcc
Q 025065 2 MSGEGEEKVVCVTGAS----------GFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG 71 (258)
Q Consensus 2 m~~~~~~~~ilItGa~----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 71 (258)
|....+.+||||.|+. -+-+.+.+++|.+.|++++.+.-+++.-....- -.+-+...-...+
T Consensus 1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d--------~aD~lYfePlt~e 72 (127)
T d1a9xa3 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE--------MADATYIEPIHWE 72 (127)
T ss_dssp CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG--------GSSEEECSCCCHH
T ss_pred CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh--------hcceeeeecCCHH
Confidence 3333356899999994 467889999999999999998877765432111 1122334445567
Q ss_pred cHHHHhC--CCcEEEec
Q 025065 72 SFDSAVD--GCDGVFHT 86 (258)
Q Consensus 72 ~~~~~~~--~~d~Vih~ 86 (258)
.+.++++ ++|.|+-.
T Consensus 73 ~v~~Ii~~E~pd~il~~ 89 (127)
T d1a9xa3 73 VVRKIIEKERPDAVLPT 89 (127)
T ss_dssp HHHHHHHHHCCSEEECS
T ss_pred HHHHHHHHhCcCCeEEE
Confidence 7888775 69998843
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=95.82 E-value=0.0041 Score=47.33 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=29.5
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
-|+|+|| |..|..++.+|.++|++|+++.+..
T Consensus 6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3999998 9999999999999999999998864
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=95.75 E-value=0.0055 Score=47.01 Aligned_cols=35 Identities=26% Similarity=0.198 Sum_probs=31.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
+|||+|+|| |.-|-..+.+|.++|++|+++.+++.
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~~ 35 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEGK 35 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 489999998 99999999999999999999987653
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=95.74 E-value=0.0063 Score=43.18 Aligned_cols=74 Identities=16% Similarity=0.116 Sum_probs=45.6
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEE-EEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHH---HhC-CCc
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTV-KATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDS---AVD-GCD 81 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~~-~~d 81 (258)
.+.+|+|.|+ |.+|...++.+...|.++ ++.++++.+. +...++ .. .++ .|..+.+..++ +.. ++|
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~--~~a~~~---Ga-~~~--i~~~~~~~~~~i~~~t~gg~D 98 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL--ELAKQL---GA-THV--INSKTQDPVAAIKEITDGGVN 98 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH--HHHHHH---TC-SEE--EETTTSCHHHHHHHHTTSCEE
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHH--HHHHHc---CC-eEE--EeCCCcCHHHHHHHHcCCCCc
Confidence 4678999997 999999999988888755 4555544222 112221 11 122 34555433332 222 489
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+||.+++.
T Consensus 99 ~vid~~G~ 106 (174)
T d1f8fa2 99 FALESTGS 106 (174)
T ss_dssp EEEECSCC
T ss_pred EEEEcCCc
Confidence 99999987
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=95.72 E-value=0.0086 Score=41.54 Aligned_cols=36 Identities=22% Similarity=0.139 Sum_probs=29.4
Q ss_pred CcEEEEE-CCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVT-GASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilIt-Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
++.++|. .+.||+|.+++..|.+.|.+|+++.+.+.
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 3556655 34599999999999999999999998754
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.72 E-value=0.034 Score=37.42 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=43.7
Q ss_pred EEEEECCcchHHHHHHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC-----CCcEE
Q 025065 10 VVCVTGASGFVASWLVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD-----GCDGV 83 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~V 83 (258)
||.|.|++|-.|+.+++.+.+. ++++.+......... .+.. .+.+ +..|.+.|+.+.+.++ ++-.|
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~--~~~~-----~~~D-vvIDFS~p~~~~~~~~~~~~~~~~~V 72 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLS--LLTD-----GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAV 72 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTH--HHHT-----TTCS-EEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchh--hhcc-----ccCC-EEEEcccHHHHHHHHHHHHhcCCCEE
Confidence 6999999999999999998764 578765432221111 1110 1112 4568888877665543 46667
Q ss_pred EecCCC
Q 025065 84 FHTASP 89 (258)
Q Consensus 84 ih~a~~ 89 (258)
+=+.|.
T Consensus 73 iGTTG~ 78 (135)
T d1yl7a1 73 VGTTGF 78 (135)
T ss_dssp ECCCCC
T ss_pred Eecccc
Confidence 733333
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.67 E-value=0.013 Score=41.44 Aligned_cols=74 Identities=15% Similarity=0.070 Sum_probs=45.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCC-CcccHHHHh-----CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLL-EEGSFDSAV-----DG 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~-----~~ 79 (258)
.+.+|+|.|+ |.+|...++.+...|. .|+++++++.+. +...++ +.+.+ .|.. +.+.+.+.+ .+
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~--~~ak~l-----Ga~~~-i~~~~~~~~~~~~~~~~~~~g 98 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF--ARAKEF-----GATEC-INPQDFSKPIQEVLIEMTDGG 98 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH--HHHHHH-----TCSEE-ECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH--HHHHHh-----CCcEE-EeCCchhhHHHHHHHHHcCCC
Confidence 4678999998 5689999999998885 566666554332 112221 12222 2332 233444433 36
Q ss_pred CcEEEecCCC
Q 025065 80 CDGVFHTASP 89 (258)
Q Consensus 80 ~d~Vih~a~~ 89 (258)
+|+||.+++.
T Consensus 99 ~D~vid~~G~ 108 (176)
T d2fzwa2 99 VDYSFECIGN 108 (176)
T ss_dssp BSEEEECSCC
T ss_pred CcEeeecCCC
Confidence 9999999886
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.66 E-value=0.043 Score=37.14 Aligned_cols=33 Identities=33% Similarity=0.403 Sum_probs=29.5
Q ss_pred CcEEEEECCc---chHHHHHHHHHHHCCCEEEEEEc
Q 025065 8 EKVVCVTGAS---GFVASWLVKLLLQRGYTVKATVR 40 (258)
Q Consensus 8 ~~~ilItGa~---G~iG~~l~~~L~~~g~~V~~~~r 40 (258)
.++|.|.|++ +-.|..+++.|.+.||+|+.+.-
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP 54 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNP 54 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECC
Confidence 5789999998 88999999999999999988753
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.62 E-value=0.007 Score=42.95 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=30.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
+++|+|.|| |++|-+++..|.+.|.+|+++.+.+.
T Consensus 3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA 37 (185)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence 578999998 99999999999999998777665543
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.62 E-value=0.015 Score=40.90 Aligned_cols=83 Identities=19% Similarity=0.061 Sum_probs=52.8
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccC--CCcccHHHHhCCCcE
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANL--LEEGSFDSAVDGCDG 82 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~~~d~ 82 (258)
...+|+++|.|.+.-+|+-|+..|+++|..|+....+....... .... .-......|+ ...+.+++....+|+
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~lk~~~~~aDI 100 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTR-GESL----KLNKHHVEDLGEYSEDLLKKCSLDSDV 100 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEES-CCCS----SCCCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccc-ccce----eeeeeccccccccchhHHhhccccCCE
Confidence 35789999999999999999999999999998665432111000 0000 0001111222 223457777778999
Q ss_pred EEecCCCCCC
Q 025065 83 VFHTASPVIF 92 (258)
Q Consensus 83 Vih~a~~~~~ 92 (258)
||..+|..+.
T Consensus 101 vIsavG~p~~ 110 (171)
T d1edza1 101 VITGVPSENY 110 (171)
T ss_dssp EEECCCCTTC
T ss_pred EEEccCCCcc
Confidence 9998887553
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.53 E-value=0.057 Score=35.24 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=27.8
Q ss_pred cEEEEECCc---chHHHHHHHHHHHCCCEEEEEE
Q 025065 9 KVVCVTGAS---GFVASWLVKLLLQRGYTVKATV 39 (258)
Q Consensus 9 ~~ilItGa~---G~iG~~l~~~L~~~g~~V~~~~ 39 (258)
|+|.|.|++ +-.|..+.+.|++.||+|+.+.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVn 35 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN 35 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEc
Confidence 579999988 7799999999999999988775
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.51 E-value=0.051 Score=41.54 Aligned_cols=37 Identities=22% Similarity=0.144 Sum_probs=32.4
Q ss_pred CCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 4 GEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 4 ~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
...++++|+|-|. |-+|+++++.|.+.|..|++++.+
T Consensus 32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~ 68 (293)
T d1hwxa1 32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES 68 (293)
T ss_dssp SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3457899999997 999999999999999999988753
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.49 E-value=0.094 Score=39.00 Aligned_cols=102 Identities=15% Similarity=0.125 Sum_probs=60.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhh---------------ccccCcCCcEEEEEccCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHL---------------RELDGATERLHLFKANLL 68 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~---------------~~~~~~~~~~~~~~~Dl~ 68 (258)
.++|+|.|+ |.+|++++..|...|. +++++|.+.-+..- +.+ +.+...++.+.....+..
T Consensus 30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~ 108 (247)
T d1jw9b_ 30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL 108 (247)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhh
Confidence 468999997 8899999999999995 78888754322211 111 111112344444443322
Q ss_pred -CcccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 025065 69 -EEGSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAI 126 (258)
Q Consensus 69 -~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il 126 (258)
+.+.....+...|+|+.+... ..++... ..++.+.+++++..
T Consensus 109 ~~~~~~~~~~~~~divid~~d~------------~~~~~~i----n~~~~~~~ip~i~g 151 (247)
T d1jw9b_ 109 LDDAELAALIAEHDLVLDCTDN------------VAVRNQL----NAGCFAAKVPLVSG 151 (247)
T ss_dssp CCHHHHHHHHHTSSEEEECCSS------------HHHHHHH----HHHHHHHTCCEEEE
T ss_pred hhhccccccccccceeeeccch------------hhhhhhH----HHHHHHhCCCcccc
Confidence 234455666778998876543 2233333 33355668887754
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.45 E-value=0.0091 Score=41.83 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=30.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.+.+|+|.|+ |-+|...++.+...|.+|+++++++.+
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r 63 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEK 63 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHH
Confidence 4578999976 889999999999999999998876543
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=95.39 E-value=0.0078 Score=46.78 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=32.5
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
+.|+|+|+|| |..|-..+.+|.++|++|+++.+.+.
T Consensus 29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~ 64 (370)
T d2iida1 29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER 64 (370)
T ss_dssp SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 5689999998 99999999999999999999987653
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=95.37 E-value=0.015 Score=43.06 Aligned_cols=37 Identities=30% Similarity=0.405 Sum_probs=33.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
..++|+|.|| |+.|-..+.+|.++|++|+++.++...
T Consensus 48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~~ 84 (233)
T d1djqa3 48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEKI 84 (233)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecccc
Confidence 5689999998 999999999999999999999876543
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.31 E-value=0.026 Score=39.89 Aligned_cols=74 Identities=9% Similarity=-0.011 Sum_probs=48.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc----HHHHh--CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS----FDSAV--DG 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~----~~~~~--~~ 79 (258)
.+.+|+|+|+ |-+|...++.+...| .+|+++++++++... ..++ +.+.+ .|..+.++ +.+.. .+
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~--Ak~~-----GA~~~-in~~~~~~~~~~~~~~~~g~G 99 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEK--AMAV-----GATEC-ISPKDSTKPISEVLSEMTGNN 99 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH--HHHH-----TCSEE-ECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHH--HHhc-----CCcEE-ECccccchHHHHHHHHhcccc
Confidence 4568999987 999999999999999 589999987755432 1111 12221 13333222 22222 36
Q ss_pred CcEEEecCCC
Q 025065 80 CDGVFHTASP 89 (258)
Q Consensus 80 ~d~Vih~a~~ 89 (258)
+|+||.+.+.
T Consensus 100 ~d~vi~~~g~ 109 (176)
T d1d1ta2 100 VGYTFEVIGH 109 (176)
T ss_dssp CCEEEECSCC
T ss_pred ceEEEEeCCc
Confidence 9999999887
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=95.28 E-value=0.012 Score=40.63 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=29.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~ 42 (258)
||+|.|.|+||-||.....-+.+. .++|.++.-..
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 578999999999999999988775 37898887544
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=95.21 E-value=0.0083 Score=45.80 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=30.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
|+|+|+|| |.-|-..+.+|.++|++|+++.+++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~ 34 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR 34 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 47999998 99999999999999999999987653
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.20 E-value=0.019 Score=46.69 Aligned_cols=79 Identities=16% Similarity=0.119 Sum_probs=51.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hhhcc---------------ccCcCC--cEEEEEcc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EHLRE---------------LDGATE--RLHLFKAN 66 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~~~---------------~~~~~~--~~~~~~~D 66 (258)
+.||||.|+ |.+|.++++.|+..|. +++++|.+.-...- +.+.. +...++ ++..+..+
T Consensus 37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~ 115 (426)
T d1yovb1 37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNK 115 (426)
T ss_dssp HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSC
T ss_pred cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeecc
Confidence 468999999 6699999999999996 78888865432211 11111 111123 35566666
Q ss_pred CCCcccHHHHhCCCcEEEecCCC
Q 025065 67 LLEEGSFDSAVDGCDGVFHTASP 89 (258)
Q Consensus 67 l~~~~~~~~~~~~~d~Vih~a~~ 89 (258)
+.+.. .+.++++|+|+.+...
T Consensus 116 i~~~~--~~~~~~~DlVi~~~Dn 136 (426)
T d1yovb1 116 IQDFN--DTFYRQFHIIVCGLDS 136 (426)
T ss_dssp GGGBC--HHHHTTCSEEEECCSC
T ss_pred ccchH--HHHHHhcchheeccCc
Confidence 65543 4678899999976554
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=95.18 E-value=0.0057 Score=39.66 Aligned_cols=38 Identities=18% Similarity=-0.066 Sum_probs=31.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
+.+|+|+|.|+ |--|.-++..|.+..-+|+...|+...
T Consensus 30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~~ 67 (107)
T d2gv8a2 30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGGG 67 (107)
T ss_dssp GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCcc
Confidence 46899999997 899999999999887777666665544
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.12 E-value=0.011 Score=42.60 Aligned_cols=33 Identities=30% Similarity=0.283 Sum_probs=27.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
|||.|.| .||+|..++..| ++|++|++++-++.
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~ 33 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPS 33 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHH
Confidence 5799997 699999999766 57999999987653
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.12 E-value=0.0062 Score=43.40 Aligned_cols=81 Identities=10% Similarity=0.151 Sum_probs=46.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhcccc----CcCCcE-EEEEccCCCcccHHHHhCCCc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELD----GATERL-HLFKANLLEEGSFDSAVDGCD 81 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~----~~~~~~-~~~~~Dl~~~~~~~~~~~~~d 81 (258)
|-||.|-| .|.||+.+++.|.+++ .+|+++....+......+.... ...... .+....+.-...+..+..++|
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD 79 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence 35899999 5999999999999875 6888886544332211111100 000000 000011222234566667899
Q ss_pred EEEecCCC
Q 025065 82 GVFHTASP 89 (258)
Q Consensus 82 ~Vih~a~~ 89 (258)
+|+.|.+.
T Consensus 80 iViecTG~ 87 (178)
T d1b7go1 80 IVVDTTPN 87 (178)
T ss_dssp EEEECCST
T ss_pred EEEECCCC
Confidence 99999997
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.11 E-value=0.025 Score=39.93 Aligned_cols=74 Identities=15% Similarity=-0.001 Sum_probs=47.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcc-cHHHH---h--CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEG-SFDSA---V--DG 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~---~--~~ 79 (258)
.+.+|+|.|+ |.+|...++.+...|. +|++++++.++... ..++ +.+.+ .|..+.+ .+.+. . .+
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~--a~~l-----Ga~~~-i~~~~~d~~~~~~~~~~~~~G 97 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPK--AIEL-----GATEC-LNPKDYDKPIYEVICEKTNGG 97 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH--HHHT-----TCSEE-ECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHH--HHHc-----CCcEE-EcCCCchhHHHHHHHHhcCCC
Confidence 4678999997 9999999999998885 78888876544321 1111 22222 2333322 22322 2 26
Q ss_pred CcEEEecCCC
Q 025065 80 CDGVFHTASP 89 (258)
Q Consensus 80 ~d~Vih~a~~ 89 (258)
+|+||.+++.
T Consensus 98 ~d~vid~~g~ 107 (174)
T d1p0fa2 98 VDYAVECAGR 107 (174)
T ss_dssp BSEEEECSCC
T ss_pred CcEEEEcCCC
Confidence 9999999887
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.09 E-value=0.008 Score=46.59 Aligned_cols=35 Identities=11% Similarity=0.070 Sum_probs=31.1
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
|..|+|+|| |+-|..+|++|++.|++|.++.+++.
T Consensus 1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 357999998 99999999999999999999987654
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=95.07 E-value=0.011 Score=41.50 Aligned_cols=37 Identities=24% Similarity=0.367 Sum_probs=32.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~ 44 (258)
++++|+|.|+ |..|++++..|.+.|. +|+++.|+.++
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~k 53 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKT 53 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHH
Confidence 4678999998 9999999999999995 79999887654
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.00 E-value=0.059 Score=37.87 Aligned_cols=76 Identities=12% Similarity=0.216 Sum_probs=47.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEcc-----------CCCcccHHH
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKAN-----------LLEEGSFDS 75 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----------l~~~~~~~~ 75 (258)
.+||.|-|- |-||+.++++|.+++ .+|+++....+......+... ++..+..+ +.....+..
T Consensus 2 ~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (172)
T d2czca2 2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL-----GIPVYAASEEFIPRFEKEGFEVAGTLND 75 (172)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT-----TCCEEESSGGGHHHHHHHTCCCSCBHHH
T ss_pred cEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhc-----CceeecccccceeeecccCccccchhhh
Confidence 368999996 999999999998765 688777643322221122111 12222211 222345666
Q ss_pred HhCCCcEEEecCCC
Q 025065 76 AVDGCDGVFHTASP 89 (258)
Q Consensus 76 ~~~~~d~Vih~a~~ 89 (258)
+..++|+|+-|.|.
T Consensus 76 ~~~~vDvViEcTG~ 89 (172)
T d2czca2 76 LLEKVDIIVDATPG 89 (172)
T ss_dssp HHTTCSEEEECCST
T ss_pred hhccCCEEEECCCC
Confidence 67789999999998
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=94.96 E-value=0.019 Score=37.59 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=29.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHH---CCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQ---RGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~---~g~~V~~~~r~~~~ 44 (258)
+++++|.|| |++|-+++..|.+ .|.+|+++.|.+.-
T Consensus 18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~i 56 (117)
T d1feca2 18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMI 56 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccccc
Confidence 579999998 9999999987654 48899999987643
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=94.92 E-value=0.016 Score=39.95 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=29.5
Q ss_pred CcEEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~ 42 (258)
+|+|.|.|+||-||.....-+.+. .++|.+++-..
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 589999999999999999988775 48898886544
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.91 E-value=0.069 Score=34.90 Aligned_cols=71 Identities=14% Similarity=0.153 Sum_probs=48.4
Q ss_pred CCcEEEEECCcc----------hHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHH
Q 025065 7 EEKVVCVTGASG----------FVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSA 76 (258)
Q Consensus 7 ~~~~ilItGa~G----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (258)
..+||||.|+.. +-+.+.+++|.+.|++++.+.-+++.-.... .-.+-+...-...+.+.++
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~--------d~aD~lYfeplt~e~v~~I 74 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY--------DTSDRLYFEPVTLEDVLEI 74 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST--------TSSSEEECCCCSHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh--------hhcCceEEccCCHHHHHHH
Confidence 468999999843 7888999999999999999987776543311 1112223333445667776
Q ss_pred hC--CCcEEEe
Q 025065 77 VD--GCDGVFH 85 (258)
Q Consensus 77 ~~--~~d~Vih 85 (258)
++ ++|.|+-
T Consensus 75 i~~E~p~~ii~ 85 (121)
T d1a9xa4 75 VRIEKPKGVIV 85 (121)
T ss_dssp HHHHCCSEEEC
T ss_pred HHHhCCCEEEe
Confidence 64 6888773
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=94.90 E-value=0.015 Score=38.18 Aligned_cols=36 Identities=17% Similarity=0.225 Sum_probs=29.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHH---CCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQ---RGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~---~g~~V~~~~r~~~~ 44 (258)
+++++|.|| |++|-+++..|.+ +|.+|+++.|.+.-
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~i 58 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMI 58 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence 579999998 9999999977665 45789999886543
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.87 E-value=0.016 Score=41.77 Aligned_cols=34 Identities=18% Similarity=0.002 Sum_probs=28.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPN 43 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~ 43 (258)
|||+|.|| |++|-+++..|.+.+ .+|+++.|...
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~~ 36 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCCc
Confidence 58999998 999999999998864 68988887653
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=94.84 E-value=0.027 Score=39.02 Aligned_cols=70 Identities=23% Similarity=0.204 Sum_probs=51.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
+.+|+++|.|= |.+|+.++++|...|.+|+++..+|-.. ++.. -++++. ..+.++++..|++|-
T Consensus 21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~a----lqA~---mdGf~v--------~~~~~a~~~aDi~vT 84 (163)
T d1v8ba1 21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICA----IQAV---MEGFNV--------VTLDEIVDKGDFFIT 84 (163)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHH----HHHH---TTTCEE--------CCHHHHTTTCSEEEE
T ss_pred ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhh----HHHH---hcCCcc--------CchhHccccCcEEEE
Confidence 45799999995 9999999999999999999987765322 2211 123332 346788888999998
Q ss_pred cCCCCC
Q 025065 86 TASPVI 91 (258)
Q Consensus 86 ~a~~~~ 91 (258)
+.|..+
T Consensus 85 aTGn~~ 90 (163)
T d1v8ba1 85 CTGNVD 90 (163)
T ss_dssp CCSSSS
T ss_pred cCCCCc
Confidence 888754
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=94.69 E-value=0.021 Score=40.16 Aligned_cols=76 Identities=17% Similarity=0.065 Sum_probs=44.4
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhC--CCcEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVD--GCDGV 83 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V 83 (258)
.+.+|+|.|+ |.+|...++.+...|. .|+++++++.+. +...++ . ....+..+-.+.+...+... ++|+|
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~--~~~~~~---g-a~~~i~~~~~~~~~~~~~~~~~g~d~v 104 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL--KLAERL---G-ADHVVDARRDPVKQVMELTRGRGVNVA 104 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH--HHHHHT---T-CSEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHH--HHHhhc---c-cceeecCcccHHHHHHHhhCCCCceEE
Confidence 3578999986 9999999998887775 666677655322 122221 1 11233222111122223222 58999
Q ss_pred EecCCC
Q 025065 84 FHTASP 89 (258)
Q Consensus 84 ih~a~~ 89 (258)
|.+++.
T Consensus 105 id~~g~ 110 (172)
T d1h2ba2 105 MDFVGS 110 (172)
T ss_dssp EESSCC
T ss_pred EEecCc
Confidence 999987
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.65 E-value=0.065 Score=41.04 Aligned_cols=28 Identities=25% Similarity=0.243 Sum_probs=24.6
Q ss_pred CcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 16 ASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 16 a~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
+||-.|.+|+++|..+|++|+.+.+..+
T Consensus 44 SSGk~G~alA~~~~~~Ga~V~li~g~~s 71 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGVLFLYRARS 71 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred CchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 4699999999999999999999976643
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=94.61 E-value=0.022 Score=44.56 Aligned_cols=35 Identities=23% Similarity=0.173 Sum_probs=31.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC--CEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG--YTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~ 43 (258)
+|+|+|+|| |.-|-..+.+|+++| ++|+++.|+..
T Consensus 4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 689999998 999999999999876 69999988754
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.59 E-value=0.013 Score=44.89 Aligned_cols=32 Identities=28% Similarity=0.276 Sum_probs=30.1
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
+|+|.|| |..|..++..|.+.|++|+++.+++
T Consensus 4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~ 35 (292)
T d1k0ia1 4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT 35 (292)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 6999998 9999999999999999999998875
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.56 E-value=0.021 Score=39.70 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=27.1
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
||+|.|| |++|-+++..|. ++.+|+++.+.+
T Consensus 2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence 7999998 999999999995 578999998754
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.47 E-value=0.024 Score=41.72 Aligned_cols=32 Identities=28% Similarity=0.306 Sum_probs=29.4
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
|+|+|| |.-|...|.+|.++|++|.++.+++.
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~ 39 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQDH 39 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 899997 99999999999999999999988753
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.46 E-value=0.024 Score=38.28 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=29.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHH----CCCEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQ----RGYTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~----~g~~V~~~~r~~~ 43 (258)
.++++|.|| ||+|-+++..|.. .|.+|+.+.+.+.
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 468999998 9999999998853 5889999887654
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=94.45 E-value=0.021 Score=43.32 Aligned_cols=32 Identities=22% Similarity=0.064 Sum_probs=29.4
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
|+|.|| |..|..++.+|.++|++|+++.+...
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~~ 37 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFDP 37 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 899998 99999999999999999999988643
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=94.39 E-value=0.036 Score=40.13 Aligned_cols=37 Identities=24% Similarity=0.227 Sum_probs=32.1
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
..++++|+|-|. |-+|+++++.|.+.|.+|++.+.+.
T Consensus 24 ~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~ 60 (201)
T d1c1da1 24 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDT 60 (201)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchH
Confidence 357899999995 9999999999999999999877543
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.34 E-value=0.027 Score=40.59 Aligned_cols=75 Identities=16% Similarity=0.079 Sum_probs=47.0
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc---HHHHhC--CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS---FDSAVD--GC 80 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~ 80 (258)
.+.+|+|.|+ |-+|...++.+...|. .|+++++++.+. +...++ +.+.+ .|-.+.+. +.++.. ++
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl--~~a~~~-----Ga~~~-~~~~~~~~~~~i~~~t~g~g~ 95 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL--AHAKAQ-----GFEIA-DLSLDTPLHEQIAALLGEPEV 95 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH--HHHHHT-----TCEEE-ETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhh--Hhhhhc-----cccEE-EeCCCcCHHHHHHHHhCCCCc
Confidence 4679999986 9999888888877775 788888765332 111221 33433 24344332 233333 58
Q ss_pred cEEEecCCCC
Q 025065 81 DGVFHTASPV 90 (258)
Q Consensus 81 d~Vih~a~~~ 90 (258)
|++|.+.|..
T Consensus 96 D~vid~vG~~ 105 (195)
T d1kola2 96 DCAVDAVGFE 105 (195)
T ss_dssp EEEEECCCTT
T ss_pred EEEEECcccc
Confidence 9999999853
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=94.13 E-value=0.023 Score=43.66 Aligned_cols=32 Identities=28% Similarity=0.561 Sum_probs=29.1
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDP 42 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~ 42 (258)
+|+|+|| |.+|..++.+|.++|+ +|+++.|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 6999998 9999999999999996 699998864
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.07 E-value=0.012 Score=41.72 Aligned_cols=31 Identities=39% Similarity=0.388 Sum_probs=25.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVR 40 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r 40 (258)
.+|+|.|| |++|-+++..|.+.|.+|.++.+
T Consensus 4 a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~ 34 (183)
T d1d7ya1 4 APVVVLGA-GLASVSFVAELRQAGYQGLITVV 34 (183)
T ss_dssp SSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence 46999997 99999999999999977655543
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.03 E-value=0.043 Score=41.19 Aligned_cols=35 Identities=20% Similarity=0.096 Sum_probs=30.9
Q ss_pred cEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNS 44 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~ 44 (258)
.+|+|+|| |..|..++..|.+.| ++|+++.|++..
T Consensus 2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~~ 37 (288)
T d3c96a1 2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSEI 37 (288)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence 58999998 999999999999999 489999887643
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=93.99 E-value=0.085 Score=36.98 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=46.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEcc-----------CCCcccHHH
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKAN-----------LLEEGSFDS 75 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----------l~~~~~~~~ 75 (258)
|++|.|-|- |-||+.+++.|.+++ .+|+++....+......+... +...+..+ +.-...+..
T Consensus 1 M~~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~v~g~~~~ 74 (171)
T d1cf2o1 1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKK-----GYDLYVAIPERVKLFEKAGIEVAGTVDD 74 (171)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHT-----TCCEEESSGGGHHHHHHTTCCCCEEHHH
T ss_pred CeEEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhc-----CCceEecccccceeecccCcccCCChhH
Confidence 478999985 999999999998776 577777654333221111111 11111111 111224556
Q ss_pred HhCCCcEEEecCCC
Q 025065 76 AVDGCDGVFHTASP 89 (258)
Q Consensus 76 ~~~~~d~Vih~a~~ 89 (258)
++.++|+|+-|.|.
T Consensus 75 ~~~~vDvViEcTG~ 88 (171)
T d1cf2o1 75 MLDEADIVIDCTPE 88 (171)
T ss_dssp HHHTCSEEEECCST
T ss_pred hhcCCCEEEEccCC
Confidence 67789999999998
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.98 E-value=0.027 Score=39.87 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=31.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCc
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
.++|+|+|.|+ |..+++++.+|.+.| +|+++.|+.++.
T Consensus 16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka 53 (177)
T d1nvta1 16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKA 53 (177)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHH
Confidence 46789999998 779999999997766 899999976543
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.71 E-value=0.044 Score=39.72 Aligned_cols=77 Identities=14% Similarity=0.186 Sum_probs=43.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc----hhhccccCcCCcEEEEE-ccCCCcccHHHHhC--CCc
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT----EHLRELDGATERLHLFK-ANLLEEGSFDSAVD--GCD 81 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~--~~d 81 (258)
|||++.|. +-.|..++++|.+.|++|.++.-.+++... ..+..... ..++.++. .++.+++ +.+.+. ++|
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~-~~~i~~~~~~~~~~~~-~~~~i~~~~~D 77 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAA-ERGIPVYAPDNVNHPL-WVERIAQLSPD 77 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHH-HHTCCEECCSCCCSHH-HHHHHHHTCCS
T ss_pred CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHH-HcCCcceecccccchh-hhhhhhhhccc
Confidence 57888876 557999999999999999776533322111 11111100 12455544 4555544 444443 689
Q ss_pred EEEecCC
Q 025065 82 GVFHTAS 88 (258)
Q Consensus 82 ~Vih~a~ 88 (258)
+++-+..
T Consensus 78 lii~~g~ 84 (203)
T d2blna2 78 VIFSFYY 84 (203)
T ss_dssp EEEEESC
T ss_pred ceeeeec
Confidence 9886543
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.71 E-value=0.046 Score=42.18 Aligned_cols=35 Identities=17% Similarity=0.141 Sum_probs=30.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
+..||+|+|| |.-|-.-+.+|.++|++|+++-.+.
T Consensus 4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3468999998 9999999999999999999986544
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=93.70 E-value=0.024 Score=37.74 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=27.0
Q ss_pred CcEEEEECCcchHHHHHHHHHHH-CCCEEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~-~g~~V~~~~r~~ 42 (258)
..+|+|.|| |.+|+.|++++.. .+|+++++..+.
T Consensus 3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd 37 (126)
T d2dt5a2 3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVD 37 (126)
T ss_dssp CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESC
T ss_pred CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCc
Confidence 358999998 9999999998753 478988866544
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=93.58 E-value=0.1 Score=36.36 Aligned_cols=74 Identities=18% Similarity=0.136 Sum_probs=44.3
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCC-CEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCccc-HH---HHh--CC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRG-YTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGS-FD---SAV--DG 79 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~---~~~--~~ 79 (258)
.+.+|+|.|+ |-+|...+..+...| .+|+++++++++.. ...++ +.+.+ .|..+.+. .. ... .+
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~--~a~~~-----GAd~~-in~~~~~~~~~~~~~~~~~~G 98 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE--KAKVF-----GATDF-VNPNDHSEPISQVLSKMTNGG 98 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH--HHHHT-----TCCEE-ECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHH--HHHHc-----CCcEE-EcCCCcchhHHHHHHhhccCC
Confidence 4578999997 557777777777776 57888887664432 12221 22221 23333222 22 222 36
Q ss_pred CcEEEecCCC
Q 025065 80 CDGVFHTASP 89 (258)
Q Consensus 80 ~d~Vih~a~~ 89 (258)
+|+|+.+++.
T Consensus 99 ~d~vid~~G~ 108 (175)
T d1cdoa2 99 VDFSLECVGN 108 (175)
T ss_dssp BSEEEECSCC
T ss_pred cceeeeecCC
Confidence 9999999987
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=93.37 E-value=0.041 Score=40.79 Aligned_cols=33 Identities=24% Similarity=0.201 Sum_probs=29.4
Q ss_pred EEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPN 43 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~ 43 (258)
+|+|+|| |.-|-..+.+|.++|+ +|+++.+++.
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~ 35 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH 35 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 6999998 9999999999999996 7999987653
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.24 E-value=0.043 Score=40.28 Aligned_cols=26 Identities=27% Similarity=0.231 Sum_probs=23.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTV 35 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V 35 (258)
|||+|.|| |.+|...+.+|+++|++|
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence 57999998 999999999999999754
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.11 E-value=0.0079 Score=42.49 Aligned_cols=77 Identities=14% Similarity=0.037 Sum_probs=41.9
Q ss_pred cEEEEECCc-chHHHHHHHHHHHCC----CEEEEEEcCCCCccchhhcccc-----CcCCcEEEEEccCCCcccHHHHhC
Q 025065 9 KVVCVTGAS-GFVASWLVKLLLQRG----YTVKATVRDPNSPKTEHLRELD-----GATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 9 ~~ilItGa~-G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
+||.|+||. .+.+..++.-+.... -++..++.++.....+.+.... ..+..... ....+..+.++
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~-----~~~td~~~al~ 76 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI-----HLTLDRRRALD 76 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE-----EEESCHHHHHT
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee-----eecCCchhhcC
Confidence 689999973 344455555444332 3778787765432222221110 00111111 12344667889
Q ss_pred CCcEEEecCCCC
Q 025065 79 GCDGVFHTASPV 90 (258)
Q Consensus 79 ~~d~Vih~a~~~ 90 (258)
++|+||.+|+..
T Consensus 77 gaDvVv~ta~~~ 88 (169)
T d1s6ya1 77 GADFVTTQFRVG 88 (169)
T ss_dssp TCSEEEECCCTT
T ss_pred CCCEEEEccccC
Confidence 999999999983
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=93.03 E-value=0.084 Score=36.99 Aligned_cols=76 Identities=21% Similarity=0.172 Sum_probs=45.8
Q ss_pred CcEEEEECCcchHHHH--HHHHHHHC----CCEEEEEEcCCCCccchh--hcc-ccCcCCcEEEEEccCCCcccHHHHhC
Q 025065 8 EKVVCVTGASGFVASW--LVKLLLQR----GYTVKATVRDPNSPKTEH--LRE-LDGATERLHLFKANLLEEGSFDSAVD 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~--~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (258)
.+||.|.|| |.+|.. ++..|+.. +.+++.++.++....... ... ....+...+ +....+..+++.
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~-----i~~~td~~eaL~ 75 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLK-----FEKTMNLDDVII 75 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCE-----EEEESCHHHHHT
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeE-----EEEeCChhhccc
Confidence 468999997 888865 34445533 358999998764432100 111 000011222 222345778899
Q ss_pred CCcEEEecCCC
Q 025065 79 GCDGVFHTASP 89 (258)
Q Consensus 79 ~~d~Vih~a~~ 89 (258)
++|+|++.++.
T Consensus 76 dad~Vv~~~~~ 86 (171)
T d1obba1 76 DADFVINTAMV 86 (171)
T ss_dssp TCSEEEECCCT
T ss_pred CCCeEeeeccc
Confidence 99999999888
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.87 E-value=0.077 Score=44.31 Aligned_cols=109 Identities=14% Similarity=0.078 Sum_probs=63.7
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCCCccc---hh---------------hccccCcCCcE--EEEEcc
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPNSPKT---EH---------------LRELDGATERL--HLFKAN 66 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~---------------~~~~~~~~~~~--~~~~~D 66 (258)
..+|+|.|+ |.+|.++++.|+..|. .++++|.+.-.... +. .+.+...++.+ +++..+
T Consensus 25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~ 103 (529)
T d1yova1 25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEES 103 (529)
T ss_dssp HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSC
T ss_pred CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCC
Confidence 468999998 7799999999999994 78887754322110 00 01122223433 333333
Q ss_pred CCCc-ccHHHHhCCCcEEEecCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCcccc
Q 025065 67 LLEE-GSFDSAVDGCDGVFHTASPVIFLSDNPQEWYSLAKTLAEEAAWKFAKENGIDLVAIHPGTVIG 133 (258)
Q Consensus 67 l~~~-~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilRp~~v~G 133 (258)
..+. +.-.+.+.++|+||.+... ......+..++.+++++++..+...+||
T Consensus 104 ~~~~~~~~~~~~~~~dvVv~~~~~----------------~~~~~~l~~~c~~~~ip~i~~~~~G~~G 155 (529)
T d1yova1 104 PENLLDNDPSFFCRFTVVVATQLP----------------ESTSLRLADVLWNSQIPLLICRTYGLVG 155 (529)
T ss_dssp HHHHHHSCGGGGGGCSEEEEESCC----------------HHHHHHHHHHHHHHTCCEEEEEEETTEE
T ss_pred chhhhhhHHHHhcCCCEEEECCCC----------------HHHHHHHHHHHHHcCCCEEEEeccCCEE
Confidence 2211 1112345678999966433 1122234445667789999998877777
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=92.34 E-value=0.073 Score=41.23 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=23.3
Q ss_pred cEEEEECC-c-chH--HHHHHHHHHHCCCEEEEEEc
Q 025065 9 KVVCVTGA-S-GFV--ASWLVKLLLQRGYTVKATVR 40 (258)
Q Consensus 9 ~~ilItGa-~-G~i--G~~l~~~L~~~g~~V~~~~r 40 (258)
|||+|++| | |.+ ..+|+++|.++||+|+.++.
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~ 36 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT 36 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 57777664 4 333 34689999999999988764
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=92.24 E-value=0.13 Score=38.27 Aligned_cols=35 Identities=31% Similarity=0.343 Sum_probs=31.3
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
.++++|+|-|. |-+|+++++.|.+.|..|++++..
T Consensus 29 l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 29 IEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence 57899999996 999999999999999999887754
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=92.14 E-value=0.084 Score=40.59 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=30.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
-.|+|+|| |+-|-..+.+|.++|.+|+++.+.+.
T Consensus 8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 36999998 99999999999999999999987654
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=91.99 E-value=0.16 Score=37.37 Aligned_cols=37 Identities=32% Similarity=0.228 Sum_probs=32.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
+.++++|+|-|- |-+|+++++.|.+.|..|++.+.+.
T Consensus 36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~ 72 (230)
T d1leha1 36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNK 72 (230)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccH
Confidence 457899999997 9999999999999999999876543
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.91 E-value=0.09 Score=40.66 Aligned_cols=32 Identities=28% Similarity=0.307 Sum_probs=29.1
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
|+|+|| |.-|-..+.+|.++|++|+++.++..
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~~ 33 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARDR 33 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 789998 99999999999999999999987653
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=91.39 E-value=0.18 Score=40.22 Aligned_cols=33 Identities=18% Similarity=0.085 Sum_probs=24.6
Q ss_pred cEEEEECC------cchH---HHHHHHHHHHCCCEEEEEEcC
Q 025065 9 KVVCVTGA------SGFV---ASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 9 ~~ilItGa------~G~i---G~~l~~~L~~~g~~V~~~~r~ 41 (258)
||||+++. +|.+ -.+|+++|.++||+|+++...
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~ 42 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS 42 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 57887553 3444 478899999999999988743
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.02 E-value=0.19 Score=34.34 Aligned_cols=35 Identities=29% Similarity=0.114 Sum_probs=29.8
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCC-EEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGY-TVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~ 43 (258)
+++|+|+|| |..|-..+..+.+.|. .|+++.|+..
T Consensus 45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~~ 80 (153)
T d1gtea3 45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKGF 80 (153)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence 468999998 9999999999999985 6888887654
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=90.97 E-value=0.17 Score=37.85 Aligned_cols=35 Identities=26% Similarity=0.108 Sum_probs=31.2
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEc
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVR 40 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r 40 (258)
..++++|+|-|. |-+|+++++.|.+.|..|++++.
T Consensus 33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence 457899999995 99999999999999999988764
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=90.72 E-value=0.11 Score=40.31 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=29.8
Q ss_pred EEEEECCcchHHHHHHHHHH-----HCCCEEEEEEcCCCCc
Q 025065 10 VVCVTGASGFVASWLVKLLL-----QRGYTVKATVRDPNSP 45 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~-----~~g~~V~~~~r~~~~~ 45 (258)
-|+|.|| |..|..++..|. ++|++|+++.|++...
T Consensus 9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~ 48 (360)
T d1pn0a1 9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKV 48 (360)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCC
T ss_pred CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCCC
Confidence 3899998 999999999996 4799999999876543
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=90.70 E-value=0.14 Score=37.75 Aligned_cols=34 Identities=18% Similarity=0.022 Sum_probs=30.3
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
-|+|+|| |..|...+..|.++|++|.++.+.+..
T Consensus 4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~ 37 (251)
T d2i0za1 4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL 37 (251)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3899998 999999999999999999999886543
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=90.52 E-value=0.15 Score=37.07 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=29.7
Q ss_pred cEEEEECCcchHHHHHHHHHHHC--CCEEEEEEcCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQR--GYTVKATVRDPN 43 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~ 43 (258)
.||.|+|| |--|-..+.+|.++ |++|+++.+.+.
T Consensus 2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 48999998 99999999999875 789999987754
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=90.26 E-value=0.47 Score=32.44 Aligned_cols=66 Identities=20% Similarity=0.246 Sum_probs=38.2
Q ss_pred cEEEEECCcchHHHH-HHHHHHHC-CCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 9 KVVCVTGASGFVASW-LVKLLLQR-GYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 9 ~~ilItGa~G~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
++|.|.|+ |.+|+. .++.|... +.+++++............... + ++ -.+.++++.+++|+|+-+
T Consensus 2 iri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~-----~-----~~--~~~~~~~l~~~~D~V~I~ 68 (164)
T d1tlta1 2 LRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW-----R-----IP--YADSLSSLAASCDAVFVH 68 (164)
T ss_dssp EEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH-----T-----CC--BCSSHHHHHTTCSEEEEC
T ss_pred CEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcc-----c-----cc--ccccchhhhhhccccccc
Confidence 57999995 999975 56667654 5788776533322211111111 1 11 223466667889998855
Q ss_pred C
Q 025065 87 A 87 (258)
Q Consensus 87 a 87 (258)
.
T Consensus 69 t 69 (164)
T d1tlta1 69 S 69 (164)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=90.22 E-value=0.21 Score=34.68 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=43.9
Q ss_pred CcEEEEECCcchHHHHHHHHHHHC-C----CEEEEEEcCCCCccc--hhhccccC-cCCcEEEEEccCCCcccHHHHhCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQR-G----YTVKATVRDPNSPKT--EHLRELDG-ATERLHLFKANLLEEGSFDSAVDG 79 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~-g----~~V~~~~r~~~~~~~--~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (258)
..||.|.||++.-...++..|+.. . -+++.++.++++... ..+..... ......... ..+..+.+++
T Consensus 3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal~~ 77 (167)
T d1u8xx1 3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFTD 77 (167)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHSS
T ss_pred CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhccCC
Confidence 468999999543333455555543 1 378888876644321 11111100 011222222 2357788999
Q ss_pred CcEEEecCCCC
Q 025065 80 CDGVFHTASPV 90 (258)
Q Consensus 80 ~d~Vih~a~~~ 90 (258)
+|+||.+++..
T Consensus 78 AD~Vvitag~~ 88 (167)
T d1u8xx1 78 VDFVMAHIRVG 88 (167)
T ss_dssp CSEEEECCCTT
T ss_pred CCEEEECCCcC
Confidence 99999999883
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=89.90 E-value=0.81 Score=33.46 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=29.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHH-CCCEEEEEEc
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQ-RGYTVKATVR 40 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~-~g~~V~~~~r 40 (258)
..++++|+|-|. |-+|+++++.|.+ .|..|++++.
T Consensus 28 ~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd 63 (234)
T d1b26a1 28 DPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSD 63 (234)
T ss_dssp CTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeec
Confidence 457889999985 9999999999975 5999988764
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=89.62 E-value=0.18 Score=39.53 Aligned_cols=30 Identities=20% Similarity=0.132 Sum_probs=27.9
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
|+|+|+ |+-|..+|.+|.++|++|.++-+.
T Consensus 5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence 788996 999999999999999999999875
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=89.10 E-value=0.73 Score=32.88 Aligned_cols=79 Identities=20% Similarity=0.231 Sum_probs=46.6
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccc-h-hh-----ccccCcCCcEEEEEccCCCcccHHHHhC--
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKT-E-HL-----RELDGATERLHLFKANLLEEGSFDSAVD-- 78 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~-~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 78 (258)
.|||++.|. +..+..+.+.|.+.|++|.++.-.++.... . .+ .... ...++.....+..+.+...+.++
T Consensus 3 ~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (206)
T d1fmta2 3 SLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLA-EEKGLPVFQPVSLRPQENQQLVAEL 80 (206)
T ss_dssp CCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHH-HHTTCCEECCSCSCSHHHHHHHHHT
T ss_pred CcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhh-hccCccccccccccchhhHHHHhhh
Confidence 578999985 778889999999999998776543322111 0 00 0000 01245555555555555566554
Q ss_pred CCcEEEecCC
Q 025065 79 GCDGVFHTAS 88 (258)
Q Consensus 79 ~~d~Vih~a~ 88 (258)
++|+++-+..
T Consensus 81 ~~d~~v~~~~ 90 (206)
T d1fmta2 81 QADVMVVVAY 90 (206)
T ss_dssp TCSEEEEESC
T ss_pred cceEEEeecc
Confidence 5788774444
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=88.83 E-value=0.17 Score=37.53 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=31.1
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
..|+|+|| |--|...+..|.++|.+|.++.+.+..
T Consensus 5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (253)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 35999998 999999999999999999999887644
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=88.82 E-value=0.51 Score=32.26 Aligned_cols=35 Identities=29% Similarity=0.352 Sum_probs=24.2
Q ss_pred CcEEEEECCcchHHHHH-HHHHHHCC-CEEEEEE-cCCC
Q 025065 8 EKVVCVTGASGFVASWL-VKLLLQRG-YTVKATV-RDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l-~~~L~~~g-~~V~~~~-r~~~ 43 (258)
+.|+.|.| +|.+|+.+ .+.|.+.. .+++++. |+..
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~ 41 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA 41 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence 46899999 79999865 55555444 5777764 4443
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=88.73 E-value=0.26 Score=34.56 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=24.4
Q ss_pred CCCcEEEEECCcchHHHH-HHHHHHHCC--CEEEEEEc
Q 025065 6 GEEKVVCVTGASGFVASW-LVKLLLQRG--YTVKATVR 40 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~-l~~~L~~~g--~~V~~~~r 40 (258)
|++.||.|.|+ |.+|+. .++.+.+.+ .+|+++..
T Consensus 1 MkkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d 37 (181)
T d1zh8a1 1 LRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTS 37 (181)
T ss_dssp CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEEC
T ss_pred CCCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEe
Confidence 45568999996 999986 467777643 57877653
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=88.17 E-value=0.28 Score=35.13 Aligned_cols=31 Identities=10% Similarity=-0.054 Sum_probs=28.3
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
|+|+|| |+.|...+.++.+.|.+|.++.+..
T Consensus 5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~ 35 (217)
T d1gesa1 5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE 35 (217)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence 789998 9999999999999999999998753
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=88.00 E-value=0.45 Score=32.67 Aligned_cols=73 Identities=21% Similarity=0.190 Sum_probs=41.1
Q ss_pred cEEEEECCcchHHHHHHH-HHHH-C----CCEEEEEEcCCCCccc--hhhccccCcCCcEEEEEccCCCcccHHHHhCCC
Q 025065 9 KVVCVTGASGFVASWLVK-LLLQ-R----GYTVKATVRDPNSPKT--EHLRELDGATERLHLFKANLLEEGSFDSAVDGC 80 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~-~L~~-~----g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (258)
|||.|.|| |-+|...+- .|+. . ..++..++.++++... ........ ....... ..+..+.++++
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~--~~~~~~~-----t~~~~~~l~~a 72 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVK--DRFKVLI-----SDTFEGAVVDA 72 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHT--TSSEEEE-----CSSHHHHHTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhc--cCceEEE-----ecCcccccCCC
Confidence 58999998 546655543 3332 1 3589988876543321 10011111 1222221 13356788999
Q ss_pred cEEEecCCC
Q 025065 81 DGVFHTASP 89 (258)
Q Consensus 81 d~Vih~a~~ 89 (258)
|+||..++.
T Consensus 73 DvVVita~~ 81 (162)
T d1up7a1 73 KYVIFQFRP 81 (162)
T ss_dssp SEEEECCCT
T ss_pred CEEEEeccc
Confidence 999999987
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=87.59 E-value=0.29 Score=37.23 Aligned_cols=33 Identities=21% Similarity=0.136 Sum_probs=29.6
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
-|+|+|+ |..|-..+.+|.++|.+|+++.+.+.
T Consensus 18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~~ 50 (308)
T d1y0pa2 18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEPV 50 (308)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 3899998 99999999999999999999987653
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.29 E-value=0.37 Score=33.38 Aligned_cols=25 Identities=24% Similarity=0.155 Sum_probs=20.0
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR 31 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~ 31 (258)
....+|.|.|+ |.+|+..++.|.+.
T Consensus 5 ~~k~kv~iIG~-G~~g~~h~~~l~~~ 29 (172)
T d1lc0a1 5 SGKFGVVVVGV-GRAGSVRLRDLKDP 29 (172)
T ss_dssp CCSEEEEEECC-SHHHHHHHHHHTSH
T ss_pred CCCcEEEEEcC-CHHHHHHHHHHHhC
Confidence 35578999997 99999988888653
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=87.13 E-value=0.26 Score=35.74 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=30.3
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCC-------CEEEEEEcCCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRG-------YTVKATVRDPN 43 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g-------~~V~~~~r~~~ 43 (258)
..||+|+|| |.-|-..+.+|.++| ++|+++.+.+.
T Consensus 2 p~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 2 PYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence 468999998 999999999999987 57999988653
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=87.13 E-value=0.57 Score=28.67 Aligned_cols=30 Identities=20% Similarity=0.162 Sum_probs=25.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEE
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATV 39 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~ 39 (258)
|||||.|+ |-=-.+|+..|.+..++|++.-
T Consensus 1 MkVLviGs-GgREHAia~~l~~s~~~v~~~p 30 (90)
T d1vkza2 1 VRVHILGS-GGREHAIGWAFAKQGYEVHFYP 30 (90)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCeEEEec
Confidence 58999997 6667899999998889998864
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=87.10 E-value=0.2 Score=37.50 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=29.9
Q ss_pred CcEEEEECCcchHHH-----HHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVAS-----WLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~-----~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
|++|.|+| =|.+|+ +|+..|.++|++|.++|.++..
T Consensus 1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q~ 41 (269)
T d1cp2a_ 1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKA 41 (269)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTS
T ss_pred CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 47899998 788886 6777999999999999988754
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=86.81 E-value=0.35 Score=36.24 Aligned_cols=33 Identities=18% Similarity=0.076 Sum_probs=29.4
Q ss_pred EEEEECCcchHHHHHHHHHHH-CCCEEEEEEcCCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQ-RGYTVKATVRDPN 43 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~-~g~~V~~~~r~~~ 43 (258)
-|+|+|| |.-|-..+.+|.+ .|++|+++.+.+.
T Consensus 35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~ 68 (278)
T d1rp0a1 35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS 68 (278)
T ss_dssp EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence 4999998 9999999999987 4999999998754
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=86.76 E-value=0.31 Score=38.12 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=28.0
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
-++|+|+ |+-|..++.+|.++|++|.++-+.
T Consensus 9 dvIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG 39 (370)
T d3coxa1 9 PALVIGS-GYGGAVAALRLTQAGIPTQIVEMG 39 (370)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3788997 999999999999999999999874
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=86.75 E-value=0.35 Score=37.56 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=28.4
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
-|+|.|+ |.-|..++.+|.+.|++|.++-+..
T Consensus 6 DviIVGs-G~aG~v~A~~La~~G~kVlvLEaG~ 37 (379)
T d2f5va1 6 DVVIVGS-GPIGCTYARELVGAGYKVAMFDIGE 37 (379)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred cEEEECc-CHHHHHHHHHHhhCCCeEEEEecCC
Confidence 3888997 9999999999999999999997643
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=86.69 E-value=0.23 Score=34.92 Aligned_cols=35 Identities=6% Similarity=-0.053 Sum_probs=30.7
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
+.++|+|+|| |..|-.-+.+|.+.|.+|+++.+..
T Consensus 4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~ 38 (190)
T d1trba1 4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGME 38 (190)
T ss_dssp EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence 3568999998 9999999999999999999997654
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=86.65 E-value=0.72 Score=33.87 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=29.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHC-CCEEEEEEcC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQR-GYTVKATVRD 41 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~-g~~V~~~~r~ 41 (258)
.++++|+|-|. |-+|+++++.|.+. |..|+++...
T Consensus 30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~ 65 (239)
T d1gtma1 30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS 65 (239)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence 56899999997 99999999999864 8998887644
|
| >d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.49 E-value=0.37 Score=34.64 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=27.3
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCC--EEEEEEcCC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGY--TVKATVRDP 42 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~--~V~~~~r~~ 42 (258)
..++|.|| |++|-+++..|.+.|+ +|+.+++.+
T Consensus 5 ~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~ 39 (213)
T d1m6ia1 5 VPFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP 39 (213)
T ss_dssp EEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 46788987 9999999999998775 588887644
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=86.42 E-value=0.4 Score=34.70 Aligned_cols=37 Identities=22% Similarity=0.202 Sum_probs=30.5
Q ss_pred CcEEEEECCcchHHH-----HHHHHHHHCCCEEEEEEcCCCC
Q 025065 8 EKVVCVTGASGFVAS-----WLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 8 ~~~ilItGa~G~iG~-----~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
++.|.|+|+-|.+|+ +|+.+|.+.|++|.+++-+...
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~~~ 43 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTM 43 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTS
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 467889999999987 6788888999999999866443
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=86.24 E-value=0.32 Score=35.19 Aligned_cols=38 Identities=21% Similarity=0.116 Sum_probs=31.3
Q ss_pred CcEEEEECCcchHHH-----HHHHHHHHCCCEEEEEEcCCCCc
Q 025065 8 EKVVCVTGASGFVAS-----WLVKLLLQRGYTVKATVRDPNSP 45 (258)
Q Consensus 8 ~~~ilItGa~G~iG~-----~l~~~L~~~g~~V~~~~r~~~~~ 45 (258)
||.|.|+++-|.+|+ +|+..|.++|++|..++-++...
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~~~ 43 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMA 43 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCSSS
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 477999988888886 77888999999999998776543
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.95 E-value=0.23 Score=35.11 Aligned_cols=34 Identities=12% Similarity=0.017 Sum_probs=30.2
Q ss_pred CcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 8 EKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 8 ~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
.++|+|.|| |..|-.-+.+|.+.|.+|+++.+..
T Consensus 5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~ 38 (192)
T d1vdca1 5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM 38 (192)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence 578999998 9999999999999999999887654
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.79 E-value=0.75 Score=32.81 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=26.8
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
|||++.|. +..|..+++.|+++|++|.++.-.
T Consensus 1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~t~ 32 (203)
T d2bw0a2 1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVFTV 32 (203)
T ss_dssp CEEEEECC-HHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEEcC
Confidence 57999986 678999999999999999876543
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=85.66 E-value=0.94 Score=31.23 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=27.6
Q ss_pred cEEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 9 KVVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 9 ~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
+||.|=|- |-||+.+.+.|.+++.+|.++...
T Consensus 1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd~ 32 (168)
T d2g82a1 1 MKVGINGF-GRIGRQVFRILHSRGVEVALINDL 32 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred CEEEEECC-cHHHHHHHHHHhcCCCEEEEECCC
Confidence 47888886 999999999999999999888743
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=85.55 E-value=0.24 Score=35.45 Aligned_cols=31 Identities=26% Similarity=0.228 Sum_probs=26.1
Q ss_pred cEEEEECCcchHHH-----HHHHHHHHCCCEEEEEE
Q 025065 9 KVVCVTGASGFVAS-----WLVKLLLQRGYTVKATV 39 (258)
Q Consensus 9 ~~ilItGa~G~iG~-----~l~~~L~~~g~~V~~~~ 39 (258)
|+++|||-...+|+ +|+..|.++|++|.+++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 78999997547776 78899999999998875
|
| >d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=85.47 E-value=0.86 Score=29.70 Aligned_cols=38 Identities=21% Similarity=-0.028 Sum_probs=31.7
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.++|+|+|.|+ |--+-.=+..|.+-..+|+.+.|++.-
T Consensus 28 ~~gk~V~VvGg-G~sA~~~A~~L~~~a~~V~li~r~~~~ 65 (126)
T d1fl2a2 28 FKGKRVAVIGG-GNSGVEAAIDLAGIVEHVTLLEFAPEM 65 (126)
T ss_dssp GBTCEEEEECC-SHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred cCCceEEEEeC-CHHHHHHHHhhhccCCceEEEeccccc
Confidence 36799999998 888888888898888899999987643
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=85.31 E-value=0.27 Score=33.56 Aligned_cols=33 Identities=21% Similarity=0.081 Sum_probs=26.6
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
||-++|- |.+|+.++++|++.|+.+ +.+|..++
T Consensus 2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~ 34 (156)
T d2cvza2 2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEK 34 (156)
T ss_dssp CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence 6889996 999999999999988876 45665543
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=85.25 E-value=0.44 Score=34.04 Aligned_cols=31 Identities=16% Similarity=0.131 Sum_probs=28.5
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
|+|+|| |..|...+.++.+.|.+|.++.+..
T Consensus 6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 889998 9999999999999999999998754
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=84.19 E-value=0.52 Score=35.16 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=31.3
Q ss_pred CCcEEEEECCcchHHH-----HHHHHHHHCCCEEEEEEcCCCC
Q 025065 7 EEKVVCVTGASGFVAS-----WLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~-----~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.+.+|+|+.|=|.+|+ +|+.+|.++|++|.+++-++..
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~~ 60 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAA 60 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3578888888999997 5688999999999999988643
|
| >d1eucb1 c.23.4.1 (B:246-393) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Succinyl-CoA synthetase, beta-chain, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=83.91 E-value=1.1 Score=30.02 Aligned_cols=83 Identities=12% Similarity=0.034 Sum_probs=55.8
Q ss_pred eHHHHHHHHHHhhcCCCCCceE-EEeCCCcCHHHHHHHHHHhCCCC--CCCCCCccCCCCccccCHHHH-HhcCCC--c-
Q 025065 165 EIRDVVYAHIRALEVPKASGRY-LLAGSVAQHSDILKFLREHYPTL--LRSGKLEEKYQPTIKVSQERA-KSLGIN--F- 237 (258)
Q Consensus 165 ~v~D~a~~~~~~~~~~~~~~~~-~~~~~~~t~~e~~~~i~~~~~~~--~~~~~~~~~~~~~~~~d~~k~-~~lg~~--p- 237 (258)
+.+.+.+++..++.++....++ ++-|.-.+..++++-|.+++... .+|.. -+......-...++ ++.|.. .
T Consensus 56 ~~e~v~~al~iil~d~~Vk~IlINIfGGI~rcD~vA~GIv~A~~e~~~~iPiV--VRL~Gtn~eeg~~iL~~sgl~i~~~ 133 (148)
T d1eucb1 56 KESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLV--VRLEGTNVHEAQNILTNSGLPITSA 133 (148)
T ss_dssp CHHHHHHHHHHTTSCTTCCEEEEEEECSSSCHHHHHHHHHHHHHHHTCCSCEE--EEEESTTHHHHHHHHHTTCSSEEEC
T ss_pred CHHHHHHHHHHHHCCCCccEEEEEeeEeehhHHHHHHHHHHHHHhcCCCccEE--EEeccCChHHHHHHHHHCCCCeEEe
Confidence 5678999999999988877776 77799999999999888876432 22222 22222222223344 555654 4
Q ss_pred cchhHHHHHHHH
Q 025065 238 TPWEVGVRGCIE 249 (258)
Q Consensus 238 ~~~~~~l~~~~~ 249 (258)
.+++++.+..++
T Consensus 134 ~~l~eAa~~aV~ 145 (148)
T d1eucb1 134 VDLEDAAKKAVA 145 (148)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 688999988775
|
| >d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD domain: MrsD species: Bacillus sp. hil-y85/54728 [TaxId: 69002]
Probab=83.70 E-value=0.29 Score=34.50 Aligned_cols=34 Identities=12% Similarity=0.111 Sum_probs=23.0
Q ss_pred CCcEEE--EECCcchHH-HHHHHHHHHCCCEEEEEEc
Q 025065 7 EEKVVC--VTGASGFVA-SWLVKLLLQRGYTVKATVR 40 (258)
Q Consensus 7 ~~~~il--ItGa~G~iG-~~l~~~L~~~g~~V~~~~r 40 (258)
++|||+ |||+-+-++ ..+++.|.+.|++|.++.-
T Consensus 5 ~~KkIllgvTGsiaa~k~~~l~~~L~~~g~eV~vv~T 41 (183)
T d1p3y1_ 5 KDKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMT 41 (183)
T ss_dssp GGCEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEEEC
T ss_pred CCCEEEEEEeCHHHHHHHHHHHHHHHHCCCeEEEEEE
Confidence 567765 445433333 4788888888999987653
|
| >d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=83.37 E-value=0.32 Score=33.15 Aligned_cols=28 Identities=21% Similarity=0.162 Sum_probs=24.8
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEE
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTV 35 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V 35 (258)
.+++|+|.|| |++|..++..+.+.|.++
T Consensus 28 ~gkrVvVIGg-G~~g~d~a~~~~r~G~~~ 55 (162)
T d1ps9a2 28 VGNKVAIIGC-GGIGFDTAMYLSQPGEST 55 (162)
T ss_dssp CCSEEEEECC-HHHHHHHHHHHTCCSSCG
T ss_pred cCCceEEEcC-chhHHHHHHHHHHcCCcc
Confidence 4789999998 999999999999988643
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=83.15 E-value=0.83 Score=32.71 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=33.6
Q ss_pred CCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 5 EGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 5 ~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
.+++|+|+|.|+ |--|-.++..|.+.+..++.+.|+...
T Consensus 29 ~~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~~~ 67 (235)
T d1w4xa2 29 DFSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTPHF 67 (235)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCCCEEEEECC-CccHHHHHHHHHhhhccccccccccce
Confidence 357899999997 999999999999999998888887643
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=82.93 E-value=0.61 Score=36.10 Aligned_cols=32 Identities=19% Similarity=0.090 Sum_probs=23.1
Q ss_pred cEEEE-ECCc-chHH--HHHHHHHHHCCCEEEEEEc
Q 025065 9 KVVCV-TGAS-GFVA--SWLVKLLLQRGYTVKATVR 40 (258)
Q Consensus 9 ~~ilI-tGa~-G~iG--~~l~~~L~~~g~~V~~~~r 40 (258)
||||+ +||| |.|= -.|+++|.++||+|+.+..
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~ 36 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP 36 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 35555 6666 4443 3689999999999998873
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=82.70 E-value=0.58 Score=35.75 Aligned_cols=33 Identities=18% Similarity=0.109 Sum_probs=29.5
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN 43 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 43 (258)
-|+|+|+ |..|...+..|.++|.+|+++.+.+.
T Consensus 25 DVvVIG~-G~aGl~aA~~la~~G~~V~llEk~~~ 57 (322)
T d1d4ca2 25 DVVIIGS-GGAGLAAAVSARDAGAKVILLEKEPI 57 (322)
T ss_dssp SEEEECS-SHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred eEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3899997 99999999999999999999987653
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=82.61 E-value=0.74 Score=37.27 Aligned_cols=23 Identities=22% Similarity=0.216 Sum_probs=19.0
Q ss_pred cchHH---HHHHHHHHHCCCEEEEEE
Q 025065 17 SGFVA---SWLVKLLLQRGYTVKATV 39 (258)
Q Consensus 17 ~G~iG---~~l~~~L~~~g~~V~~~~ 39 (258)
+|.+| .+|+++|.++||+|+++.
T Consensus 16 ~GGl~~vv~~La~~L~~~Gh~V~Vi~ 41 (477)
T d1rzua_ 16 TGGLADVVGALPIALEAHGVRTRTLI 41 (477)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence 36655 678999999999999885
|
| >d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD domain: Probable aromatic acid decarboxylase Pad1 species: Escherichia coli O157:H7 [TaxId: 83334]
Probab=82.46 E-value=0.79 Score=32.21 Aligned_cols=29 Identities=24% Similarity=0.284 Sum_probs=22.6
Q ss_pred EEEECCcc-hHHHHHHHHHHHC-CCEEEEEE
Q 025065 11 VCVTGASG-FVASWLVKLLLQR-GYTVKATV 39 (258)
Q Consensus 11 ilItGa~G-~iG~~l~~~L~~~-g~~V~~~~ 39 (258)
+.|||++| ..+..+++.|.+. |++|.++.
T Consensus 5 lgITGas~a~~a~~ll~~L~~~~g~~V~vv~ 35 (186)
T d1sbza_ 5 VGMTGATGAPLGVALLQALREMPNVETHLVM 35 (186)
T ss_dssp EEECSSSCHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred EEEccHHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 44899877 4588999999884 78998765
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.82 E-value=0.97 Score=32.13 Aligned_cols=31 Identities=13% Similarity=0.001 Sum_probs=28.0
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
++|+|| |..|...+.++.+.|.+|.++.+..
T Consensus 6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~ 36 (221)
T d3grsa1 6 YLVIGG-GSGGLASARRAAELGARAAVVESHK 36 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence 788998 9999999999999999999998643
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=81.74 E-value=0.72 Score=35.28 Aligned_cols=31 Identities=19% Similarity=0.183 Sum_probs=28.2
Q ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 11 VCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 11 ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
|+|+|+ |.-|-.-+-+|.++|.+|.++.+.+
T Consensus 8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~ 38 (336)
T d2bs2a2 8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLIP 38 (336)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEecCC
Confidence 899997 9999999999999999999997654
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=81.49 E-value=0.8 Score=31.50 Aligned_cols=31 Identities=13% Similarity=0.088 Sum_probs=27.9
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
-|+|.|| |..|-.-+.++.+.|.+|.++.++
T Consensus 3 DViIIGg-GpaGl~AAi~aar~G~~v~iie~~ 33 (184)
T d1fl2a1 3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMGER 33 (184)
T ss_dssp EEEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cEEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence 3789998 999999999999999999999864
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=81.35 E-value=0.87 Score=33.10 Aligned_cols=80 Identities=16% Similarity=0.151 Sum_probs=54.1
Q ss_pred CCcEEEEEC-CcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEe
Q 025065 7 EEKVVCVTG-ASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFH 85 (258)
Q Consensus 7 ~~~~ilItG-a~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (258)
.+++||=.| |+|+.-++|++..- .+-.|++++.++.... .+........++..+..|..+++.+......+|+|++
T Consensus 73 pG~~VLDlGaGsG~~t~~la~~VG-~~G~V~aVD~s~~~l~--~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~ 149 (227)
T d1g8aa_ 73 PGKSVLYLGIASGTTASHVSDIVG-WEGKIFGIEFSPRVLR--ELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHC-TTSEEEEEESCHHHHH--HHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHHhC-CCCEEEEEeCcHHHHH--HHHHHHHhcCCceEEEEECCCcccccccccceEEEEE
Confidence 467888554 67888888888553 3458999998764322 1222222245788999999998887766677898887
Q ss_pred cCCC
Q 025065 86 TASP 89 (258)
Q Consensus 86 ~a~~ 89 (258)
....
T Consensus 150 d~~~ 153 (227)
T d1g8aa_ 150 DVAQ 153 (227)
T ss_dssp CCCS
T ss_pred Eccc
Confidence 5443
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=80.83 E-value=0.72 Score=32.96 Aligned_cols=31 Identities=13% Similarity=-0.040 Sum_probs=28.3
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
.++|+|| |..|...+.++.+.|.+|.++.+.
T Consensus 7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~ 37 (220)
T d1lvla1 7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ 37 (220)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence 5899997 999999999999999999998764
|
| >d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Hypothetical protein YfdW species: Escherichia coli [TaxId: 562]
Probab=80.75 E-value=4 Score=32.13 Aligned_cols=87 Identities=13% Similarity=0.002 Sum_probs=56.3
Q ss_pred CCCCCCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCC-Cccchhhc--------cccCcCCcEEEEEccCCCcc-
Q 025065 2 MSGEGEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPN-SPKTEHLR--------ELDGATERLHLFKANLLEEG- 71 (258)
Q Consensus 2 m~~~~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~--------~~~~~~~~~~~~~~Dl~~~~- 71 (258)
|+.-+.+-|||=.+ ...-|-...+.|.+.|.+|+=+-+... +..+.... .....+.+=+.+..|+.+++
T Consensus 1 m~~PL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g 79 (417)
T d1q7ea_ 1 LSTPLQGIKVLDFT-GVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEG 79 (417)
T ss_dssp CCCTTTTCEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHH
T ss_pred CCCCCCCCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCchhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHH
Confidence 55556777887555 356677777888899999998875321 11110000 01112456688999999885
Q ss_pred --cHHHHhCCCcEEEecCCC
Q 025065 72 --SFDSAVDGCDGVFHTASP 89 (258)
Q Consensus 72 --~~~~~~~~~d~Vih~a~~ 89 (258)
.+.++++++|+||++-..
T Consensus 80 ~~~~~~Li~~aDv~i~n~~p 99 (417)
T d1q7ea_ 80 KEVMEKLIREADILVENFHP 99 (417)
T ss_dssp HHHHHHHHHHCSEEEECCCC
T ss_pred HHHHHHHHhcCcccEeccCC
Confidence 455788899999988654
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=80.69 E-value=3 Score=28.54 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=26.5
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRD 41 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~ 41 (258)
||.|-|- |-||+.+.+++.+.+.+|.++...
T Consensus 2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~ 32 (169)
T d1dssg1 2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDP 32 (169)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCCEEEEECT
T ss_pred eEEEECC-cHHHHHHHHHHHhCCCcEEEECCC
Confidence 6888884 999999999999989888887653
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.45 E-value=1.2 Score=31.88 Aligned_cols=32 Identities=16% Similarity=0.137 Sum_probs=28.9
Q ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEEcCC
Q 025065 10 VVCVTGASGFVASWLVKLLLQRGYTVKATVRDP 42 (258)
Q Consensus 10 ~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 42 (258)
-|+|+|| |-.|...+.++.+.|.+|.++.++.
T Consensus 7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 3899998 9999999999999999999998654
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.26 E-value=1.4 Score=30.48 Aligned_cols=68 Identities=19% Similarity=0.190 Sum_probs=49.1
Q ss_pred CCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCCccchhhccccCcCCcEEEEEccCCCcccHHHHhCCCcEEEec
Q 025065 7 EEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNSPKTEHLRELDGATERLHLFKANLLEEGSFDSAVDGCDGVFHT 86 (258)
Q Consensus 7 ~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (258)
++|+|.|+|= |--|++=+.-|.+.|.+|++-.|..++...... ..+++. -++.++.+..|+|..+
T Consensus 15 k~k~IaViGY-GsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~------~~Gf~v--------~~~~eA~~~aDiim~L 79 (182)
T d1np3a2 15 QGKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE------AHGLKV--------ADVKTAVAAADVVMIL 79 (182)
T ss_dssp HTSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH------HTTCEE--------ECHHHHHHTCSEEEEC
T ss_pred CCCEEEEEee-CcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHh------hhcccc--------ccHHHHhhhcCeeeee
Confidence 4689999996 999999999999999999887665443211111 123433 4577888899999977
Q ss_pred CCC
Q 025065 87 ASP 89 (258)
Q Consensus 87 a~~ 89 (258)
.-.
T Consensus 80 ~PD 82 (182)
T d1np3a2 80 TPD 82 (182)
T ss_dssp SCH
T ss_pred cch
Confidence 653
|
| >d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=80.20 E-value=1.6 Score=28.48 Aligned_cols=38 Identities=24% Similarity=0.119 Sum_probs=31.6
Q ss_pred CCCcEEEEECCcchHHHHHHHHHHHCCCEEEEEEcCCCC
Q 025065 6 GEEKVVCVTGASGFVASWLVKLLLQRGYTVKATVRDPNS 44 (258)
Q Consensus 6 ~~~~~ilItGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 44 (258)
+++|+|+|.|+ |--+-.=+..|.+--.+|+.+.|++.-
T Consensus 32 frgk~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~~ 69 (130)
T d1vdca2 32 FRNKPLAVIGG-GDSAMEEANFLTKYGSKVYIIHRRDAF 69 (130)
T ss_dssp GTTSEEEEECC-SHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred hCCCEEEEEcC-chHHHHHHHHHhCCCCcEEEEEecccc
Confidence 36899999998 888888888888877899999887653
|